ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd24d11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009526.1| Triticum aestivum clone wr1.pk0114.d12:fis, full ... 1049 0.0
2gb|BT018509.1| Zea mays clone EL01N0429C04.d mRNA sequence 414 e-112
3gb|AY106238.1| Zea mays PCO131322 mRNA sequence 414 e-112
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 159 2e-35
5dbj|AP002540.2| Oryza sativa (japonica cultivar-group) genomic D... 159 2e-35
6gb|AC009981.6|AC009981 Drosophila melanogaster, chromosome 3R, r... 54 7e-04
7gb|AC008215.5|AC008215 Drosophila melanogaster, chromosome 3R, r... 54 7e-04
8gb|AE003757.2| Drosophila melanogaster chromosome 3R, section 95... 54 7e-04
9gb|DQ083220.1| Oryza sativa (indica cultivar-group) clone 8S9B37... 52 0.003
10dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete ge... 46 0.16
11gb|AC060226.39| Homo sapiens 12 BAC RP11-101P14 (Roswell Park Ca... 44 0.63
12gb|AF110520.1|MMHC425O18 Mus musculus major histocompatibility c... 42 2.5
13emb|AL354809.12| Human DNA sequence from clone RP11-527F15 on ch... 42 2.5
14gb|AC025771.6| Homo sapiens chromosome 5 clone CTD-2203L19, comp... 42 2.5
15gb|AC024589.5| Homo sapiens chromosome 5 clone RP11-42L13, compl... 42 2.5
16dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5
17gb|AC008369.1|AC008369 Drosophila melanogaster, chromosome 2R, r... 42 2.5
18emb|CT030732.13| Mouse DNA sequence from clone RP23-27D5 on chro... 42 2.5
19gb|AE003810.3| Drosophila melanogaster chromosome 2R, section 40... 42 2.5
20gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.5
21emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007... 42 2.5
22gb|AC108499.3| Oryza sativa (japonica cultivar-group) chromosome... 40 9.8
23gb|AC158164.3| Mus musculus BAC clone RP23-457E24 from chromosom... 40 9.8
24gb|AC125016.20| Mus musculus chromosome 7, clone RP24-157A17, co... 40 9.8
25gb|AC102228.8| Mus musculus chromosome 13, clone RP24-64M1, comp... 40 9.8
26gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 40 9.8
27gb|AC124482.3| Mus musculus BAC clone RP24-120B3 from chromosome... 40 9.8
28ref|XM_721661.1| Plasmodium yoelii yoelii str. 17XNL heat shock ... 40 9.8
29emb|AL663058.5| Human DNA sequence from clone RP11-301G21 on chr... 40 9.8
30emb|AL357315.14| Human DNA sequence from clone RP11-809N15 on ch... 40 9.8
31dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
32dbj|AK102648.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.8
33gb|AC091272.12| Mus musculus chromosome 1, clone RP23-74B7, comp... 40 9.8
34emb|BX119961.9| Mouse DNA sequence from clone RP23-444M11 on chr... 40 9.8
35emb|CT009600.12| Mouse DNA sequence from clone RP23-76M10 on chr... 40 9.8
36gb|AC134828.4| Mus musculus BAC clone RP24-472K15 from 6, comple... 40 9.8 
>gb|BT009526.1| Triticum aestivum clone wr1.pk0114.d12:fis, full insert mRNA sequence
          Length = 1665

 Score = 1049 bits (529), Expect = 0.0
 Identities = 674/718 (93%), Gaps = 5/718 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    aatgtgaacagtacaaccaaccatnccaatcacagcctaacagaacgaaaaataaagaca 60
            |||||||||||| ||||||||||| ||  |||||  |||| |||||||||||  || | |
Sbjct: 1573 aatgtgaacagttcaaccaaccat-ccggtcacatgctaaaagaacgaaaaaggaa-aga 1516

                                                                        
Query: 61   aaagggacatcataggcaccactgtacattgtgcgcgagaacgaggtctgaagcagcgaa 120
            |||||| || ||||||||||  ||||||||||||||||  || ||||||||| || | | 
Sbjct: 1515 aaaggggcaccataggcaccgttgtacattgtgcgcga--acaaggtctgaaacaccaac 1458

                                                                        
Query: 121  gcatggctcgatagtctggcagaatccgcgacaccttaggaatggatgcaattcgctatc 180
            ||| |||||||||||||||||||||||||| |||||| |||||||||||||||| | |||
Sbjct: 1457 gcacggctcgatagtctggcagaatccgcgccaccttgggaatggatgcaattcaccatc 1398

                                                                        
Query: 181  actggaaagcatgaatatgaagctagacgacagttcc-agaaaatatgcacatcacatga 239
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1397 actggaaagcatgaatatgaagctagacgacagttcccagaaaatatgcacatcacatga 1338

                                                                        
Query: 240  tcctttgggcattgttcctcaaaacaatgcgcttaatcagatgtataaaagctgatagtt 299
            ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||
Sbjct: 1337 tcctttgggcattgttcctcaaaacgatgcacttaatcagatgtataaaagctgatggtt 1278

                                                                        
Query: 300  gtttgccgcagaacttcagaagtccggtcaaggctatgagatgccaccagatatgtgagg 359
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1277 gtttgccgcagaacttcagaagtccggtcaaggctatgagatgccaccagatatgtgagg 1218

                                                                        
Query: 360  gctgcatatctttcttggctaagatataaaggctttcctctgtgcatttcatgatcctcc 419
            ||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 1217 gctgcgtatctttcttggctaagatacaagggctttcctctgtgcatttcatgatcctcc 1158

                                                                        
Query: 420  tcaccgaaggcatcaaggtacagagatggccaaaatgcaagacgagccgatcgttgcaac 479
            |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1157 tcaccgaaagcatcaaggtacagagatggccaaaatgcaagacgagccgatcgttgcaac 1098

                                                                        
Query: 480  aggattgttgttttcctcaccaaaagaaatatgccaacaccagcaccacactgagacgca 539
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1097 aggattgttgttttcctcaccaaaagaaatatgccaacaccagcaccacactgagacgca 1038

                                                                        
Query: 540  tgatttangcatttaccggccctgcagcatggtttccaactaggtgagcatagcttgcca 599
            ||||||| ||||||||| ||||||||||||||||||||||||||||| |||||  |||||
Sbjct: 1037 tgatttaggcatttaccagccctgcagcatggtttccaactaggtgaacatagaatgcca 978

                                                                        
Query: 600  caaagcaaacataaagctggctcatcaggcactgaaccacaatcagggcaatgcatcttg 659
            |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 977  caaagcaaacataacgctggctcatcaggcactgaaccacaatcagggcattgcatcttg 918

                                                                      
Query: 660  acatatctttctagaagaacttggtagacangtggtaactgcatcagcctgaatggga 717
            |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 917  acatatctttctaggagaacttggtagacaggtggtaactgcatcagcctgaatggga 860
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>gb|BT018509.1| Zea mays clone EL01N0429C04.d mRNA sequence
          Length = 1426

 Score =  414 bits (209), Expect = e-112
 Identities = 384/443 (86%)
 Strand = Plus / Minus

                                                                        
Query: 265  aatgcgcttaatcagatgtataaaagctgatagttgtttgccgcagaacttcagaagtcc 324
            |||| ||| ||||||||  ||||||||  || ||||||||||| |||||||||||||| |
Sbjct: 1020 aatgggctcaatcagatccataaaagcccatcgttgtttgccgaagaacttcagaagttc 961

                                                                        
Query: 325  ggtcaaggctatgagatgccaccagatatgtgagggctgcatatctttcttggctaagat 384
            |||||||||||||||| ||||||||||| || |||| ||  ||||||||||| || ||||
Sbjct: 960  ggtcaaggctatgagaagccaccagatacgtcagggatgtgtatctttcttgacttagat 901

                                                                        
Query: 385  ataaaggctttcctctgtgcatttcatgatcctcctcaccgaaggcatcaaggtacagag 444
            ||||||| ||||||||||||||||||| ||||||||| || || ||||||||||| ||||
Sbjct: 900  ataaaggttttcctctgtgcatttcattatcctcctctccaaaagcatcaaggtatagag 841

                                                                        
Query: 445  atggccaaaatgcaagacgagccgatcgttgcaacaggattgttgttttcctcaccaaaa 504
            | ||||||||||  |||||||| ||||| |||||||||||||||||||||||||| | ||
Sbjct: 840  acggccaaaatgttagacgagcagatcgctgcaacaggattgttgttttcctcactagaa 781

                                                                        
Query: 505  gaaatatgccaacaccagcaccacactgagacgcatgatttangcatttaccggccctgc 564
            |||||||||||| |||||||||||| ||  | ||||||||   |||||| || | |||||
Sbjct: 780  gaaatatgccaataccagcaccacattgcaatgcatgattctggcatttcccagtcctgc 721

                                                                        
Query: 565  agcatggtttccaactaggtgagcatagcttgccacaaagcaaacataaagctggctcat 624
            ||||||||||||||||||| || ||||| |||||||| ||||||||||  || || ||||
Sbjct: 720  agcatggtttccaactaggcgaacatagtttgccacatagcaaacatagtgccggttcat 661

                                                                        
Query: 625  caggcactgaaccacaatcagggcaatgcatcttgacatatctttctagaagaacttggt 684
            |||||||||| |||||||||||||| |||||||||| |||||||||||| ||||| ||||
Sbjct: 660  caggcactgagccacaatcagggcattgcatcttgatatatctttctaggagaacctggt 601

                                   
Query: 685  agacangtggtaactgcatcagc 707
            | |||  |||||  |||||||||
Sbjct: 600  acacatctggtagttgcatcagc 578
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>gb|AY106238.1| Zea mays PCO131322 mRNA sequence
          Length = 3232

 Score =  414 bits (209), Expect = e-112
 Identities = 390/451 (86%)
 Strand = Plus / Minus

                                                                        
Query: 265  aatgcgcttaatcagatgtataaaagctgatagttgtttgccgcagaacttcagaagtcc 324
            |||| ||| ||||||||  ||||||||  || ||||||||||  |||||||||||||| |
Sbjct: 2829 aatgggctcaatcagatccataaaagccaatcgttgtttgccaaagaacttcagaagttc 2770

                                                                        
Query: 325  ggtcaaggctatgagatgccaccagatatgtgagggctgcatatctttcttggctaagat 384
            |||||||||||||||||||||||||||| || |||| ||  ||||||||||| || ||||
Sbjct: 2769 ggtcaaggctatgagatgccaccagatacgtcagggatgtgtatctttcttgacttagat 2710

                                                                        
Query: 385  ataaaggctttcctctgtgcatttcatgatcctcctcaccgaaggcatcaaggtacagag 444
            ||||||| ||||||||||||||||||| ||||||||| || || ||||||||||| ||||
Sbjct: 2709 ataaaggttttcctctgtgcatttcattatcctcctctccaaaagcatcaaggtatagag 2650

                                                                        
Query: 445  atggccaaaatgcaagacgagccgatcgttgcaacaggattgttgttttcctcaccaaaa 504
            | ||||||||||  |||||||| ||||| |||||||||||||||||||||||||| | ||
Sbjct: 2649 acggccaaaatgttagacgagcagatcgctgcaacaggattgttgttttcctcactagaa 2590

                                                                        
Query: 505  gaaatatgccaacaccagcaccacactgagacgcatgatttangcatttaccggccctgc 564
            |||||||||||| |||||||||||| ||  | ||||||||   |||||| || | |||||
Sbjct: 2589 gaaatatgccaataccagcaccacattgcaatgcatgattctggcatttcccagtcctgc 2530

                                                                        
Query: 565  agcatggtttccaactaggtgagcatagcttgccacaaagcaaacataaagctggctcat 624
            ||||||||||||||||| | || ||||| |||||||| ||||||||||  || || ||||
Sbjct: 2529 agcatggtttccaactaagggaacatagtttgccacatagcaaacatagtgccggttcat 2470

                                                                        
Query: 625  caggcactgaaccacaatcagggcaatgcatcttgacatatctttctagaagaacttggt 684
            |||||||||| |||||||||||||| |||||||||| |||||||||||| ||||| ||||
Sbjct: 2469 caggcactgagccacaatcagggcattgcatcttgatatatctttctaggagaacctggt 2410

                                           
Query: 685  agacangtggtaactgcatcagcctgaatgg 715
            | |||  |||||  ||||||||||| |||||
Sbjct: 2409 acacatctggtagttgcatcagcctaaatgg 2379
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  159 bits (80), Expect = 2e-35
 Identities = 101/108 (93%)
 Strand = Plus / Minus

                                                                           
Query: 560     cctgcagcatggtttccaactaggtgagcatagcttgccacaaagcaaacataaagctgg 619
               |||||||||||||||||||||||| || ||||||||||||||||| |||||||| |||||
Sbjct: 2609407 cctgcagcatggtttccaactaggcgaacatagcttgccacaaagtaaacataatgctgg 2609348

                                                               
Query: 620     ctcatcaggcactgaaccacaatcagggcaatgcatcttgacatatct 667
                ||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 2609347 ttcatcaggcactgaaccgcaatcagggcattgcatcttgacatatct 2609300



 Score =  113 bits (57), Expect = 8e-22
 Identities = 69/73 (94%)
 Strand = Plus / Minus

                                                                           
Query: 345     accagatatgtgagggctgcatatctttcttggctaagatataaaggctttcctctgtgc 404
               |||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||
Sbjct: 2610485 accagatatgtgagggctgcgtatctttcttggcttagatacaaaggctttcctctgtgc 2610426

                            
Query: 405     atttcatgatcct 417
               || ||||||||||
Sbjct: 2610425 atgtcatgatcct 2610413



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                           
Query: 415     cctcctcaccgaaggcatcaaggtacagagatggccaaaatgcaagacgagccgatcgtt 474
               |||||||||||||||| ||||||||  ||||||||||||| || ||||||   ||||| |
Sbjct: 2609729 cctcctcaccgaaggcgtcaaggtagggagatggccaaaaggcgagacgaatagatcgct 2609670

                                   
Query: 475     gcaacaggattgttgttttc 494
               ||||||| ||||||||||||
Sbjct: 2609669 gcaacagtattgttgttttc 2609650



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 45/47 (95%)
 Strand = Plus / Minus

                                                              
Query: 498     accaaaagaaatatgccaacaccagcaccacactgagacgcatgatt 544
               |||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 2609562 accaaaagaaatatgccaacgccagcaccacattgagacgcatgatt 2609516



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                           
Query: 274     aatcagatgtataaaagctgatagttgtttgccgcagaacttcagaagtccggtcaaggc 333
               ||||||||  ||||| |||||| ||||| ||||  || ||||||||||||| ||||||||
Sbjct: 2610641 aatcagatccataaatgctgatggttgtctgcctaagtacttcagaagtcctgtcaaggc 2610582

                             
Query: 334     tatgagatgccacc 347
               | ||||||||||||
Sbjct: 2610581 tgtgagatgccacc 2610568



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                 
Query: 210     acagttccagaaaatatgcacatcacatgatcct 243
               |||| |||||||||||| ||||||||| ||||||
Sbjct: 2611362 acagctccagaaaatattcacatcacaagatcct 2611329
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>dbj|AP002540.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0434B04
          Length = 167029

 Score =  159 bits (80), Expect = 2e-35
 Identities = 101/108 (93%)
 Strand = Plus / Minus

                                                                         
Query: 560   cctgcagcatggtttccaactaggtgagcatagcttgccacaaagcaaacataaagctgg 619
             |||||||||||||||||||||||| || ||||||||||||||||| |||||||| |||||
Sbjct: 59182 cctgcagcatggtttccaactaggcgaacatagcttgccacaaagtaaacataatgctgg 59123

                                                             
Query: 620   ctcatcaggcactgaaccacaatcagggcaatgcatcttgacatatct 667
              ||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 59122 ttcatcaggcactgaaccgcaatcagggcattgcatcttgacatatct 59075



 Score =  113 bits (57), Expect = 8e-22
 Identities = 69/73 (94%)
 Strand = Plus / Minus

                                                                         
Query: 345   accagatatgtgagggctgcatatctttcttggctaagatataaaggctttcctctgtgc 404
             |||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||
Sbjct: 60260 accagatatgtgagggctgcgtatctttcttggcttagatacaaaggctttcctctgtgc 60201

                          
Query: 405   atttcatgatcct 417
             || ||||||||||
Sbjct: 60200 atgtcatgatcct 60188



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                         
Query: 415   cctcctcaccgaaggcatcaaggtacagagatggccaaaatgcaagacgagccgatcgtt 474
             |||||||||||||||| ||||||||  ||||||||||||| || ||||||   ||||| |
Sbjct: 59504 cctcctcaccgaaggcgtcaaggtagggagatggccaaaaggcgagacgaatagatcgct 59445

                                 
Query: 475   gcaacaggattgttgttttc 494
             ||||||| ||||||||||||
Sbjct: 59444 gcaacagtattgttgttttc 59425



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 45/47 (95%)
 Strand = Plus / Minus

                                                            
Query: 498   accaaaagaaatatgccaacaccagcaccacactgagacgcatgatt 544
             |||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 59337 accaaaagaaatatgccaacgccagcaccacattgagacgcatgatt 59291



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                         
Query: 274   aatcagatgtataaaagctgatagttgtttgccgcagaacttcagaagtccggtcaaggc 333
             ||||||||  ||||| |||||| ||||| ||||  || ||||||||||||| ||||||||
Sbjct: 60416 aatcagatccataaatgctgatggttgtctgcctaagtacttcagaagtcctgtcaaggc 60357

                           
Query: 334   tatgagatgccacc 347
             | ||||||||||||
Sbjct: 60356 tgtgagatgccacc 60343



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 210   acagttccagaaaatatgcacatcacatgatcct 243
             |||| |||||||||||| ||||||||| ||||||
Sbjct: 61137 acagctccagaaaatattcacatcacaagatcct 61104
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>gb|AC009981.6|AC009981 Drosophila melanogaster, chromosome 3R, region 97C-97D, BAC clone
             BACR24O14, complete sequence
          Length = 170356

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                        
Query: 39    aacagaacgaaaaataaagacaaaagg 65
             |||||||||||||||||||||||||||
Sbjct: 11237 aacagaacgaaaaataaagacaaaagg 11211
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>gb|AC008215.5|AC008215 Drosophila melanogaster, chromosome 3R, region 97C-97C, BAC clone
              BACR08N03, complete sequence
          Length = 165439

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                         
Query: 39     aacagaacgaaaaataaagacaaaagg 65
              |||||||||||||||||||||||||||
Sbjct: 147955 aacagaacgaaaaataaagacaaaagg 147929
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>gb|AE003757.2| Drosophila melanogaster chromosome 3R, section 95 of 118 of the complete
              sequence
          Length = 191834

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                         
Query: 39     aacagaacgaaaaataaagacaaaagg 65
              |||||||||||||||||||||||||||
Sbjct: 156486 aacagaacgaaaaataaagacaaaagg 156460
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>gb|DQ083220.1| Oryza sativa (indica cultivar-group) clone 8S9B37 mRNA sequence
          Length = 410

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 210 acagttccagaaaatatgcacatcacatgatcctttgg 247
           |||| |||||||||||| ||||||||| ||||||||||
Sbjct: 57  acagctccagaaaatattcacatcacaagatcctttgg 20
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>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome
          Length = 3031430

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 660     acatatctttctagaagaacttg 682
               |||||||||||||||||||||||
Sbjct: 1669617 acatatctttctagaagaacttg 1669639
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>gb|AC060226.39| Homo sapiens 12 BAC RP11-101P14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 132604

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1     aatgtgaacagtacaaccaacc 22
             ||||||||||||||||||||||
Sbjct: 14239 aatgtgaacagtacaaccaacc 14260
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>gb|AF110520.1|MMHC425O18 Mus musculus major histocompatibility complex region NG27, NG28, RPS28,
             NADH oxidoreductase, NG29, KIFC1, Fas-binding protein,
             BING1, tapasin, RalGDS-like, KE2, BING4, beta
             1,3-galactosyl transferase, and RPS18 genes, complete cds;
             Sacm21 gene, partial cds; and unknown gene
          Length = 213245

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 242   ctttgggcattgttcctcaaa 262
             |||||||||||||||||||||
Sbjct: 52164 ctttgggcattgttcctcaaa 52184
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>emb|AL354809.12| Human DNA sequence from clone RP11-527F15 on chromosome 13 Contains a
             NTF2-like export factor 1 (NXT1) pseudogene, complete
             sequence
          Length = 135619

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 599   acaaagcaaacataaagctgg 619
             |||||||||||||||||||||
Sbjct: 58639 acaaagcaaacataaagctgg 58659
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>gb|AC025771.6| Homo sapiens chromosome 5 clone CTD-2203L19, complete sequence
          Length = 134286

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 48    aaaaataaagacaaaagggacatca 72
             |||||||||||||||| ||||||||
Sbjct: 63665 aaaaataaagacaaaaaggacatca 63689
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>gb|AC024589.5| Homo sapiens chromosome 5 clone RP11-42L13, complete sequence
          Length = 170272

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 48    aaaaataaagacaaaagggacatca 72
             |||||||||||||||| ||||||||
Sbjct: 32287 aaaaataaagacaaaaaggacatca 32311
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 498     accaaaagaaatatgccaaca 518
               |||||||||||||||||||||
Sbjct: 3556256 accaaaagaaatatgccaaca 3556276
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>gb|AC008369.1|AC008369 Drosophila melanogaster, chromosome 2R, region 52A4-52B4, P1 clones
             BACR48C01 and DS08592, complete sequence
          Length = 192366

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 594   ttgccacaaagcaaacataaa 614
             |||||||||||||||||||||
Sbjct: 62481 ttgccacaaagcaaacataaa 62501
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>emb|CT030732.13| Mouse DNA sequence from clone RP23-27D5 on chromosome 17, complete
              sequence
          Length = 220163

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 242    ctttgggcattgttcctcaaa 262
              |||||||||||||||||||||
Sbjct: 114742 ctttgggcattgttcctcaaa 114762
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>gb|AE003810.3| Drosophila melanogaster chromosome 2R, section 40 of 73 of the complete
              sequence
          Length = 271178

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 594    ttgccacaaagcaaacataaa 614
              |||||||||||||||||||||
Sbjct: 139839 ttgccacaaagcaaacataaa 139859
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 498     accaaaagaaatatgccaaca 518
               |||||||||||||||||||||
Sbjct: 3556201 accaaaagaaatatgccaaca 3556221
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>emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007_H06 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 103647

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 498   accaaaagaaatatgccaaca 518
             |||||||||||||||||||||
Sbjct: 71184 accaaaagaaatatgccaaca 71204
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>gb|AC108499.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1187_E11,
              complete sequence
          Length = 133352

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 216    ccagaaaatatgcacatcacatga 239
              ||||||||| ||||||||||||||
Sbjct: 107385 ccagaaaatgtgcacatcacatga 107362
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>gb|AC158164.3| Mus musculus BAC clone RP23-457E24 from chromosome 13, complete sequence
          Length = 137550

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 241    cctttgggcattgttcctca 260
              ||||||||||||||||||||
Sbjct: 125115 cctttgggcattgttcctca 125134
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>gb|AC125016.20| Mus musculus chromosome 7, clone RP24-157A17, complete sequence
          Length = 176607

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 284   ataaaagctgatagttgttt 303
             ||||||||||||||||||||
Sbjct: 70169 ataaaagctgatagttgttt 70150
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>gb|AC102228.8| Mus musculus chromosome 13, clone RP24-64M1, complete sequence
          Length = 201286

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 241   cctttgggcattgttcctca 260
             ||||||||||||||||||||
Sbjct: 90910 cctttgggcattgttcctca 90891
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>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 418    cctcaccgaaggcatcaagg 437
              ||||||||||||||||||||
Sbjct: 286510 cctcaccgaaggcatcaagg 286491
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>gb|AC124482.3| Mus musculus BAC clone RP24-120B3 from chromosome 14, complete sequence
          Length = 165934

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 213    gttccagaaaatatgcacat 232
              ||||||||||||||||||||
Sbjct: 138706 gttccagaaaatatgcacat 138687
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>ref|XM_721661.1| Plasmodium yoelii yoelii str. 17XNL heat shock protein 70 (PY06158)
            partial mRNA
          Length = 2049

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 182  ctggaaagcatgaatatgaagcta 205
            |||||||| |||||||||||||||
Sbjct: 1799 ctggaaaggatgaatatgaagcta 1822
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>emb|AL663058.5| Human DNA sequence from clone RP11-301G21 on chromosome 1 Contains a
             acid phosphatase 1 soluble (ACP1) pseudogene, complete
             sequence
          Length = 88827

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 29    atcacagcctaacagaacgaaaaa 52
             |||||||||||||| |||||||||
Sbjct: 60531 atcacagcctaacacaacgaaaaa 60554
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>emb|AL357315.14| Human DNA sequence from clone RP11-809N15 on chromosome 6 Contains a
              putative novel gene and a novel gene. Contains a CpG
              island, complete sequence
          Length = 121129

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 502    aaagaaatatgccaacacca 521
              ||||||||||||||||||||
Sbjct: 100589 aaagaaatatgccaacacca 100570
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 216      ccagaaaatatgcacatcacatga 239
                ||||||||| ||||||||||||||
Sbjct: 26082624 ccagaaaatgtgcacatcacatga 26082601
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>dbj|AK102648.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033100L05, full
           insert sequence
          Length = 1139

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 216 ccagaaaatatgcacatcacatga 239
           ||||||||| ||||||||||||||
Sbjct: 763 ccagaaaatgtgcacatcacatga 786
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>gb|AC091272.12| Mus musculus chromosome 1, clone RP23-74B7, complete sequence
          Length = 252476

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 213    gttccagaaaatatgcacat 232
              ||||||||||||||||||||
Sbjct: 156271 gttccagaaaatatgcacat 156252
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>emb|BX119961.9| Mouse DNA sequence from clone RP23-444M11 on chromosome X, complete
             sequence
          Length = 76072

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 284   ataaaagctgatagttgttt 303
             ||||||||||||||||||||
Sbjct: 10999 ataaaagctgatagttgttt 10980
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>emb|CT009600.12| Mouse DNA sequence from clone RP23-76M10 on chromosome 14, complete
              sequence
          Length = 217257

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 213    gttccagaaaatatgcacat 232
              ||||||||||||||||||||
Sbjct: 192073 gttccagaaaatatgcacat 192092
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>gb|AC134828.4| Mus musculus BAC clone RP24-472K15 from 6, complete sequence
          Length = 163810

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 213    gttccagaaaatatgcacat 232
              ||||||||||||||||||||
Sbjct: 130963 gttccagaaaatatgcacat 130982


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,252,871
Number of Sequences: 3902068
Number of extensions: 6252871
Number of successful extensions: 116371
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 116129
Number of HSP's gapped (non-prelim): 239
length of query: 717
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 694
effective length of database: 17,143,297,704
effective search space: 11897448606576
effective search space used: 11897448606576
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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