ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd23o10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1UPS1_ARATH (Q9ZPR7) Ureide permease 1 (AtUPS1) 128 1e-29
2UPS2_ARATH (Q9ZQ89) Ureide permease 2 (AtUPS2) 124 2e-28
3UPS4_ARATH (Q9ZQ88) Ureide permease 4 (AtUPS4) 109 6e-24
4UPS5_ARATH (Q93Z75) Ureide permease 5 (AtUPS5) 108 9e-24
5UPSA3_VIGUN (Q41706) Probable ureide permease A3 (VuA3) (Fragment) 65 1e-10
6UPS3_ARATH (Q9ZPR6) Ureide permease 3 (AtUPS3) 54 5e-07
7ADCY7_HUMAN (P51828) Adenylate cyclase type 7 (EC 4.6.1.1) (Aden... 32 1.9
8Y358_MYCPN (P75422) Hypothetical protein MG255 homolog (H91_orf534) 30 7.3

>UPS1_ARATH (Q9ZPR7) Ureide permease 1 (AtUPS1)|
          Length = 390

 Score =  128 bits (322), Expect = 1e-29
 Identities = 63/99 (63%), Positives = 70/99 (70%)
 Frame = -1

Query: 613 GVPKSSFKAYLNDWEGRQWALLAGFLCXXXXXXXXXXXXXXXXXXXXXXXALPLVSTFWG 434
           G+P+SSFKAYLNDW GR W+ LAGFLC                       ALPLVSTFWG
Sbjct: 291 GLPRSSFKAYLNDWNGRGWSFLAGFLCGFGNGLQFMGGQAAGYAAADAVQALPLVSTFWG 350

Query: 433 ILLFGEYRKSSKKTYTLLVFMLLMFIAAVATLMASAGHR 317
           ILLFGEYR+SS+KTYTLL+ MLLMFI AVA LMAS+GHR
Sbjct: 351 ILLFGEYRRSSRKTYTLLISMLLMFIVAVAVLMASSGHR 389



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>UPS2_ARATH (Q9ZQ89) Ureide permease 2 (AtUPS2)|
          Length = 398

 Score =  124 bits (312), Expect = 2e-28
 Identities = 61/99 (61%), Positives = 68/99 (68%)
 Frame = -1

Query: 613 GVPKSSFKAYLNDWEGRQWALLAGFLCXXXXXXXXXXXXXXXXXXXXXXXALPLVSTFWG 434
           G+PKSSFKAYLNDW GR WA LAGFLC                       ALPLVSTFWG
Sbjct: 299 GLPKSSFKAYLNDWNGRYWAFLAGFLCGFGNGLQFMGGQAAGYAAADSVQALPLVSTFWG 358

Query: 433 ILLFGEYRKSSKKTYTLLVFMLLMFIAAVATLMASAGHR 317
           ++LFGEYR+SS+KTY LL  ML MFI+AVA LMAS+GHR
Sbjct: 359 VVLFGEYRRSSRKTYLLLFCMLFMFISAVAVLMASSGHR 397



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>UPS4_ARATH (Q9ZQ88) Ureide permease 4 (AtUPS4)|
          Length = 401

 Score =  109 bits (273), Expect = 6e-24
 Identities = 56/99 (56%), Positives = 65/99 (65%)
 Frame = -1

Query: 613 GVPKSSFKAYLNDWEGRQWALLAGFLCXXXXXXXXXXXXXXXXXXXXXXXALPLVSTFWG 434
           G+ +SS K Y+ D +GR WA+ AGFLC                       ALPLVSTFWG
Sbjct: 302 GLARSSLKKYIYDSKGRGWAVFAGFLCGFGNGLQFMGGQAAGYAAADSVQALPLVSTFWG 361

Query: 433 ILLFGEYRKSSKKTYTLLVFMLLMFIAAVATLMASAGHR 317
           I+LFGEYRKSSK+TY LLV ML MF+AAVA LMAS+GHR
Sbjct: 362 IVLFGEYRKSSKRTYALLVSMLAMFVAAVAILMASSGHR 400



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>UPS5_ARATH (Q93Z75) Ureide permease 5 (AtUPS5)|
          Length = 413

 Score =  108 bits (271), Expect = 9e-24
 Identities = 55/100 (55%), Positives = 62/100 (62%)
 Frame = -1

Query: 607 PKSSFKAYLNDWEGRQWALLAGFLCXXXXXXXXXXXXXXXXXXXXXXXALPLVSTFWGIL 428
           P+SSF+ YL+DW GR WAL AG LC                       ALPLVSTFWGI 
Sbjct: 312 PRSSFREYLSDWNGRGWALAAGLLCGFGNGLQFMGGQAAGYAASDAVQALPLVSTFWGIY 371

Query: 427 LFGEYRKSSKKTYTLLVFMLLMFIAAVATLMASAGHRSTK 308
           LFGEYR+SS +TY LLV ML+MF  AV  LMASAG R T+
Sbjct: 372 LFGEYRRSSTRTYALLVGMLVMFTVAVGLLMASAGERETR 411



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>UPSA3_VIGUN (Q41706) Probable ureide permease A3 (VuA3) (Fragment)|
          Length = 376

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 35/74 (47%), Positives = 40/74 (54%)
 Frame = -1

Query: 610 VPKSSFKAYLNDWEGRQWALLAGFLCXXXXXXXXXXXXXXXXXXXXXXXALPLVSTFWGI 431
           +PKSS KAYL D +GR WALLAG LC                          L   FWG+
Sbjct: 302 LPKSSLKAYLADSDGRIWALLAGLLCGFGNSLQFMGGQAAGYQQQSLCRHF-LCKHFWGV 360

Query: 430 LLFGEYRKSSKKTY 389
           LLFGEYR+SS+KTY
Sbjct: 361 LLFGEYRRSSRKTY 374



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>UPS3_ARATH (Q9ZPR6) Ureide permease 3 (AtUPS3)|
          Length = 344

 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 21/27 (77%), Positives = 24/27 (88%)
 Frame = -1

Query: 613 GVPKSSFKAYLNDWEGRQWALLAGFLC 533
           G+P+SSFKAYLNDW GR W+ LAGFLC
Sbjct: 262 GLPRSSFKAYLNDWNGRGWSFLAGFLC 288



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>ADCY7_HUMAN (P51828) Adenylate cyclase type 7 (EC 4.6.1.1) (Adenylate cyclase|
           type VII) (ATP pyrophosphate-lyase 7) (Adenylyl cyclase
           7)
          Length = 1080

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = +2

Query: 140 IQSKGSTRAFSHQIHRSVLFVSLVTQVPSSSRPKQESRRHACTAAYARSKANRN 301
           ++S G+ R F+H  HR  +  S  T VP+  RPK   +RH  T   + S   R+
Sbjct: 488 LESWGAARPFAHLNHRESVS-SGETHVPNGRRPKSVPQRHRRTPDRSMSPKGRS 540



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>Y358_MYCPN (P75422) Hypothetical protein MG255 homolog (H91_orf534)|
          Length = 534

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = +3

Query: 423 NSRIPQNVLTSGNXXXXXXXXXXXXXXXMNWKPLPKPQRK 542
           N + P N L  GN               ++WK L KPQ+K
Sbjct: 67  NKKNPPNTLAKGNFVNIANKLLAVLARSLSWKQLNKPQQK 106


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,140,640
Number of Sequences: 219361
Number of extensions: 1500104
Number of successful extensions: 3669
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3663
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5538924943
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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