ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd23o04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK104366.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 4e-39
2dbj|AK104199.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 4e-39
3dbj|AK070043.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 4e-39
4gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome... 143 8e-31
5gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome... 143 8e-31
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 143 8e-31
7gb|BT016325.1| Zea mays clone Contig158 mRNA sequence 137 5e-29
8gb|AY104589.1| Zea mays PCO067801 mRNA sequence 137 5e-29
9gb|AC162030.8| Medicago truncatula clone mth2-178b21, complete s... 58 4e-05
10gb|BT014050.1| Lycopersicon esculentum clone 133147F, mRNA sequence 56 1e-04
11ref|XM_367013.1| Magnaporthe grisea 70-15 chromosome VII hypothe... 54 6e-04
12ref|XM_748615.1| Aspergillus fumigatus Af293 hypothetical protei... 50 0.009
13emb|AJ879936.2| Capsicum chinense mRNA for putative receptor ass... 50 0.009
14ref|NM_116196.1| Arabidopsis thaliana glutamate binding AT3G6331... 48 0.035
15gb|BT020236.1| Arabidopsis thaliana At3g63310 gene, complete cds 48 0.035
16ref|XM_476832.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.035
17ref|XM_476831.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.035
18emb|AL163818.1|ATMAA21 Arabidopsis thaliana DNA chromosome 3, P1... 48 0.035
19emb|AL138648.2|ATF16M2 Arabidopsis thaliana DNA chromosome 3, BA... 48 0.035
20dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.035
21dbj|AP003826.4| Oryza sativa (japonica cultivar-group) genomic D... 48 0.035
22dbj|AP004307.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.035
23dbj|AK073781.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.035
24dbj|AK070925.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.035
25gb|BT021132.1| Arabidopsis thaliana At3g63310 gene, complete cds 48 0.035
26emb|BX470168.7| Zebrafish DNA sequence from clone CH211-288L20 i... 46 0.14
27emb|BX322791.7| Zebrafish DNA sequence from clone RP71-55E12, co... 46 0.14
28emb|BX825703.1|CNS0A67U Arabidopsis thaliana Full-length cDNA Co... 46 0.14
29gb|AY110080.1| Zea mays CL3663_1 mRNA sequence 46 0.14
30gb|BT014369.1| Lycopersicon esculentum clone 133657R, mRNA sequence 44 0.55
31gb|BT014225.1| Lycopersicon esculentum clone 133420R, mRNA sequence 44 0.55
32gb|AC159332.11| Mus musculus 6 BAC RP23-413D8 (Roswell Park Canc... 44 0.55
33ref|NM_001016838.2| Xenopus tropicalis hypothetical protein LOC5... 42 2.2
34ref|XM_389598.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 42 2.2
35gb|DQ397838.1| Cenarchaeum symbiosum clone C03H05, complete sequ... 42 2.2
36dbj|AB194635.1| Leek yellow stripe virus gene for coat protein, ... 42 2.2
37dbj|AB194634.1| Leek yellow stripe virus gene for coat protein, ... 42 2.2
38gb|AC007156.2|AC007156 Homo sapiens chromosome 18, clone hRPK.41... 42 2.2
39emb|CR855480.2| Xenopus tropicalis finished cDNA, clone TNeu095j18 42 2.2
40dbj|AP005271.4| Homo sapiens genomic DNA, chromosome 18 clone:RP... 42 2.2
41gb|AC116130.15| Mus musculus chromosome 17, clone RP23-98F21, co... 40 8.5
42gb|AC167969.2| Mus musculus BAC clone RP24-446H24 from chromosom... 40 8.5
43ref|XM_359291.3| PREDICTED: Mus musculus ring finger protein 39,... 40 8.5
44gb|AC129311.6| Mus musculus BAC clone RP24-404P10 from chromosom... 40 8.5
45ref|XM_849968.1| PREDICTED: Canis familiaris similar to Cylicin-... 40 8.5
46gb|AC122384.3| Mus musculus BAC clone RP24-63P8 from chromosome ... 40 8.5
47gb|BC072645.1| Mus musculus DNA segment, Chr 4, ERATO Doi 429, e... 40 8.5
48gb|AC138769.4| Mus musculus chromosome 18 clone RP23-235B1, comp... 40 8.5
49emb|AL034348.5|HS84D21 Human DNA sequence from clone RP1-84D21 o... 40 8.5
50emb|CR860476.1| Pongo pygmaeus mRNA; cDNA DKFZp459C011 (from clo... 40 8.5
51emb|CR858051.1| Pongo pygmaeus mRNA; cDNA DKFZp459H1130 (from cl... 40 8.5
52gb|AF097907.1| Rana catesbeiana myosin heavy chain (MHC-4) mRNA,... 40 8.5
53gb|DQ397875.1| Cenarchaeum symbiosum clone C07F02, complete sequ... 40 8.5
54gb|DQ397873.1| Cenarchaeum symbiosum clone C13A11, complete sequ... 40 8.5
55gb|DQ397858.1| Cenarchaeum symbiosum clone C05G02, complete sequ... 40 8.5
56gb|DQ397630.1| Cenarchaeum symbiosum clone C01C08, complete sequ... 40 8.5
57dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102 40 8.5
58dbj|AK162607.1| Mus musculus 16 days neonate cerebellum cDNA, RI... 40 8.5
59gb|DQ060521.1| Bean yellow mosaic virus polyprotein mRNA, partia... 40 8.5
60dbj|AK078532.1| Mus musculus 12 days embryo female mullerian duc... 40 8.5
61gb|AF532114.1| Mus musculus strain 129/SvJ BAC clone citb544e14 ... 40 8.5
62gb|AF532112.1| Mus musculus strain 129/SvJ BAC clone citb20h22 f... 40 8.5
63gb|AC026736.4|AC026736 Homo sapiens chromosome 5 clone CTD-2350M... 40 8.5
64gb|AC005960.1|AC005960 Mus musculus chromosome 17 BAC citb20h22 ... 40 8.5
65ref|NM_001025106.1| Mus musculus DNA segment, Chr 4, ERATO Doi 4... 40 8.5
66emb|CR956641.9| Mouse DNA sequence from clone RP23-77N9 on chrom... 40 8.5
67emb|AL626808.28| Mouse DNA sequence from clone RP23-383I7 on chr... 40 8.5 
>dbj|AK104366.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D07, full
           insert sequence
          Length = 1060

 Score =  170 bits (86), Expect = 4e-39
 Identities = 161/186 (86%)
 Strand = Plus / Minus

                                                                       
Query: 442 agagcagaaaacagaaatggtccaaggtaactaaattccttgcccttctttgaagcccag 501
           |||||||||||||||| ||||||||| |||| |||||| || ||||||||||||||||||
Sbjct: 631 agagcagaaaacagaattggtccaagataaccaaattctttccccttctttgaagcccag 572

                                                                       
Query: 502 aatgtgtacgcagtcagagagacaaccacagctgaggtcagtaccaaagcctgaagcaca 561
           || || |||||||||| |||| |||||||||||||||||| ||  || |||| |||||||
Sbjct: 571 aaagtatacgcagtcaaagaggcaaccacagctgaggtcaatattaatgcctcaagcaca 512

                                                                       
Query: 562 atggttccttcagtgtttgcacaagccacaccaatgctgaagctcaagcacagagtgaac 621
           ||  | |||| |||||| ||||| ||||||||||| ||||| ||||||||||  ||||||
Sbjct: 511 attttcccttgagtgttagcacatgccacaccaatactgaaactcaagcacaacgtgaac 452

                 
Query: 622 aaaccc 627
           | ||||
Sbjct: 451 agaccc 446



 Score =  143 bits (72), Expect = 8e-31
 Identities = 111/124 (89%)
 Strand = Plus / Minus

                                                                       
Query: 241 aggaacaggttgaggatgtcgaggtaaagttcaacagaagcccagatgtactcgtcataa 300
           ||||||| |||||||||||| ||||| || |||||||| ||||| ||||| |||||||||
Sbjct: 832 aggaacaagttgaggatgtcaaggtagagctcaacagaggcccaaatgtagtcgtcataa 773

                                                                       
Query: 301 gtgtggcgctttatcaagttctcagtgtcgtagacgatgaagcctgagaacaccagagct 360
           ||||||||||||||||||||||| |||||||||| |||||| |||||||| || | ||||
Sbjct: 772 gtgtggcgctttatcaagttctctgtgtcgtagatgatgaaacctgagaaaactaaagct 713

               
Query: 361 ccaa 364
           ||||
Sbjct: 712 ccaa 709
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>dbj|AK104199.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-A08, full
           insert sequence
          Length = 1060

 Score =  170 bits (86), Expect = 4e-39
 Identities = 161/186 (86%)
 Strand = Plus / Minus

                                                                       
Query: 442 agagcagaaaacagaaatggtccaaggtaactaaattccttgcccttctttgaagcccag 501
           |||||||||||||||| ||||||||| |||| |||||| || ||||||||||||||||||
Sbjct: 631 agagcagaaaacagaattggtccaagataaccaaattctttccccttctttgaagcccag 572

                                                                       
Query: 502 aatgtgtacgcagtcagagagacaaccacagctgaggtcagtaccaaagcctgaagcaca 561
           || || |||||||||| |||| |||||||||||||||||| ||  || |||| |||||||
Sbjct: 571 aaagtatacgcagtcaaagaggcaaccacagctgaggtcaatattaatgcctcaagcaca 512

                                                                       
Query: 562 atggttccttcagtgtttgcacaagccacaccaatgctgaagctcaagcacagagtgaac 621
           ||  | |||| |||||| ||||| ||||||||||| ||||| ||||||||||  ||||||
Sbjct: 511 attttcccttgagtgttagcacatgccacaccaatactgaaactcaagcacaacgtgaac 452

                 
Query: 622 aaaccc 627
           | ||||
Sbjct: 451 agaccc 446



 Score =  143 bits (72), Expect = 8e-31
 Identities = 111/124 (89%)
 Strand = Plus / Minus

                                                                       
Query: 241 aggaacaggttgaggatgtcgaggtaaagttcaacagaagcccagatgtactcgtcataa 300
           ||||||| |||||||||||| ||||| || |||||||| ||||| ||||| |||||||||
Sbjct: 832 aggaacaagttgaggatgtcaaggtagagctcaacagaggcccaaatgtagtcgtcataa 773

                                                                       
Query: 301 gtgtggcgctttatcaagttctcagtgtcgtagacgatgaagcctgagaacaccagagct 360
           ||||||||||||||||||||||| |||||||||| |||||| |||||||| || | ||||
Sbjct: 772 gtgtggcgctttatcaagttctctgtgtcgtagatgatgaaacctgagaaaactaaagct 713

               
Query: 361 ccaa 364
           ||||
Sbjct: 712 ccaa 709
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>dbj|AK070043.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039E14, full
           insert sequence
          Length = 1106

 Score =  170 bits (86), Expect = 4e-39
 Identities = 161/186 (86%)
 Strand = Plus / Minus

                                                                       
Query: 442 agagcagaaaacagaaatggtccaaggtaactaaattccttgcccttctttgaagcccag 501
           |||||||||||||||| ||||||||| |||| |||||| || ||||||||||||||||||
Sbjct: 632 agagcagaaaacagaattggtccaagataaccaaattctttccccttctttgaagcccag 573

                                                                       
Query: 502 aatgtgtacgcagtcagagagacaaccacagctgaggtcagtaccaaagcctgaagcaca 561
           || || |||||||||| |||| |||||||||||||||||| ||  || |||| |||||||
Sbjct: 572 aaagtatacgcagtcaaagaggcaaccacagctgaggtcaatattaatgcctcaagcaca 513

                                                                       
Query: 562 atggttccttcagtgtttgcacaagccacaccaatgctgaagctcaagcacagagtgaac 621
           ||  | |||| |||||| ||||| ||||||||||| ||||| ||||||||||  ||||||
Sbjct: 512 attttcccttgagtgttagcacatgccacaccaatactgaaactcaagcacaacgtgaac 453

                 
Query: 622 aaaccc 627
           | ||||
Sbjct: 452 agaccc 447



 Score =  143 bits (72), Expect = 8e-31
 Identities = 111/124 (89%)
 Strand = Plus / Minus

                                                                       
Query: 241 aggaacaggttgaggatgtcgaggtaaagttcaacagaagcccagatgtactcgtcataa 300
           ||||||| |||||||||||| ||||| || |||||||| ||||| ||||| |||||||||
Sbjct: 833 aggaacaagttgaggatgtcaaggtagagctcaacagaggcccaaatgtagtcgtcataa 774

                                                                       
Query: 301 gtgtggcgctttatcaagttctcagtgtcgtagacgatgaagcctgagaacaccagagct 360
           ||||||||||||||||||||||| |||||||||| |||||| |||||||| || | ||||
Sbjct: 773 gtgtggcgctttatcaagttctctgtgtcgtagatgatgaaacctgagaaaactaaagct 714

               
Query: 361 ccaa 364
           ||||
Sbjct: 713 ccaa 710
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>gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035J16,
              complete sequence
          Length = 170233

 Score =  143 bits (72), Expect = 8e-31
 Identities = 111/124 (89%)
 Strand = Plus / Plus

                                                                          
Query: 241    aggaacaggttgaggatgtcgaggtaaagttcaacagaagcccagatgtactcgtcataa 300
              ||||||| |||||||||||| ||||| || |||||||| ||||| ||||| |||||||||
Sbjct: 147801 aggaacaagttgaggatgtcaaggtagagctcaacagaggcccaaatgtagtcgtcataa 147860

                                                                          
Query: 301    gtgtggcgctttatcaagttctcagtgtcgtagacgatgaagcctgagaacaccagagct 360
              ||||||||||||||||||||||| |||||||||| |||||| |||||||| || | ||||
Sbjct: 147861 gtgtggcgctttatcaagttctctgtgtcgtagatgatgaaacctgagaaaactaaagct 147920

                  
Query: 361    ccaa 364
              ||||
Sbjct: 147921 ccaa 147924



 Score =  131 bits (66), Expect = 3e-27
 Identities = 108/122 (88%)
 Strand = Plus / Plus

                                                                          
Query: 442    agagcagaaaacagaaatggtccaaggtaactaaattccttgcccttctttgaagcccag 501
              |||||||||||||||| ||||||||| |||| |||||| || ||||||||||||||||||
Sbjct: 148110 agagcagaaaacagaattggtccaagataaccaaattctttccccttctttgaagcccag 148169

                                                                          
Query: 502    aatgtgtacgcagtcagagagacaaccacagctgaggtcagtaccaaagcctgaagcaca 561
              || || |||||||||| |||| |||||||||||||||||| ||  || |||| |||||||
Sbjct: 148170 aaagtatacgcagtcaaagaggcaaccacagctgaggtcaatattaatgcctcaagcaca 148229

                
Query: 562    at 563
              ||
Sbjct: 148230 at 148231



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                          
Query: 568    ccttcagtgtttgcacaagccacaccaatgctgaagctcaagcacagagtgaacaaaccc 627
              |||| |||||| ||||| ||||||||||| ||||| ||||||||||  ||||||| ||||
Sbjct: 148322 ccttgagtgttagcacatgccacaccaatactgaaactcaagcacaacgtgaacagaccc 148381
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>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0006J12, complete sequence
          Length = 157069

 Score =  143 bits (72), Expect = 8e-31
 Identities = 111/124 (89%)
 Strand = Plus / Plus

                                                                         
Query: 241   aggaacaggttgaggatgtcgaggtaaagttcaacagaagcccagatgtactcgtcataa 300
             ||||||| |||||||||||| ||||| || |||||||| ||||| ||||| |||||||||
Sbjct: 45164 aggaacaagttgaggatgtcaaggtagagctcaacagaggcccaaatgtagtcgtcataa 45223

                                                                         
Query: 301   gtgtggcgctttatcaagttctcagtgtcgtagacgatgaagcctgagaacaccagagct 360
             ||||||||||||||||||||||| |||||||||| |||||| |||||||| || | ||||
Sbjct: 45224 gtgtggcgctttatcaagttctctgtgtcgtagatgatgaaacctgagaaaactaaagct 45283

                 
Query: 361   ccaa 364
             ||||
Sbjct: 45284 ccaa 45287



 Score =  131 bits (66), Expect = 3e-27
 Identities = 108/122 (88%)
 Strand = Plus / Plus

                                                                         
Query: 442   agagcagaaaacagaaatggtccaaggtaactaaattccttgcccttctttgaagcccag 501
             |||||||||||||||| ||||||||| |||| |||||| || ||||||||||||||||||
Sbjct: 45473 agagcagaaaacagaattggtccaagataaccaaattctttccccttctttgaagcccag 45532

                                                                         
Query: 502   aatgtgtacgcagtcagagagacaaccacagctgaggtcagtaccaaagcctgaagcaca 561
             || || |||||||||| |||| |||||||||||||||||| ||  || |||| |||||||
Sbjct: 45533 aaagtatacgcagtcaaagaggcaaccacagctgaggtcaatattaatgcctcaagcaca 45592

               
Query: 562   at 563
             ||
Sbjct: 45593 at 45594



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                         
Query: 568   ccttcagtgtttgcacaagccacaccaatgctgaagctcaagcacagagtgaacaaaccc 627
             |||| |||||| ||||| ||||||||||| ||||| ||||||||||  ||||||| ||||
Sbjct: 45685 ccttgagtgttagcacatgccacaccaatactgaaactcaagcacaacgtgaacagaccc 45744
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  143 bits (72), Expect = 8e-31
 Identities = 111/124 (89%)
 Strand = Plus / Plus

                                                                            
Query: 241      aggaacaggttgaggatgtcgaggtaaagttcaacagaagcccagatgtactcgtcataa 300
                ||||||| |||||||||||| ||||| || |||||||| ||||| ||||| |||||||||
Sbjct: 19444452 aggaacaagttgaggatgtcaaggtagagctcaacagaggcccaaatgtagtcgtcataa 19444511

                                                                            
Query: 301      gtgtggcgctttatcaagttctcagtgtcgtagacgatgaagcctgagaacaccagagct 360
                ||||||||||||||||||||||| |||||||||| |||||| |||||||| || | ||||
Sbjct: 19444512 gtgtggcgctttatcaagttctctgtgtcgtagatgatgaaacctgagaaaactaaagct 19444571

                    
Query: 361      ccaa 364
                ||||
Sbjct: 19444572 ccaa 19444575



 Score =  131 bits (66), Expect = 3e-27
 Identities = 108/122 (88%)
 Strand = Plus / Plus

                                                                            
Query: 442      agagcagaaaacagaaatggtccaaggtaactaaattccttgcccttctttgaagcccag 501
                |||||||||||||||| ||||||||| |||| |||||| || ||||||||||||||||||
Sbjct: 19444761 agagcagaaaacagaattggtccaagataaccaaattctttccccttctttgaagcccag 19444820

                                                                            
Query: 502      aatgtgtacgcagtcagagagacaaccacagctgaggtcagtaccaaagcctgaagcaca 561
                || || |||||||||| |||| |||||||||||||||||| ||  || |||| |||||||
Sbjct: 19444821 aaagtatacgcagtcaaagaggcaaccacagctgaggtcaatattaatgcctcaagcaca 19444880

                  
Query: 562      at 563
                ||
Sbjct: 19444881 at 19444882



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                            
Query: 568      ccttcagtgtttgcacaagccacaccaatgctgaagctcaagcacagagtgaacaaaccc 627
                |||| |||||| ||||| ||||||||||| ||||| ||||||||||  ||||||| ||||
Sbjct: 19444973 ccttgagtgttagcacatgccacaccaatactgaaactcaagcacaacgtgaacagaccc 19445032
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>gb|BT016325.1| Zea mays clone Contig158 mRNA sequence
          Length = 1172

 Score =  137 bits (69), Expect = 5e-29
 Identities = 123/141 (87%)
 Strand = Plus / Minus

                                                                       
Query: 219 cctgagcatctgtaggatggtgaggaacaggttgaggatgtcgaggtaaagttcaacaga 278
           ||||||||| |  ||||||| |||||||||||| |||||||||||||| ||  |||| ||
Sbjct: 862 cctgagcatgttcaggatggagaggaacaggttcaggatgtcgaggtacagcccaaccga 803

                                                                       
Query: 279 agcccagatgtactcgtcataagtgtggcgctttatcaagttctcagtgtcgtagacgat 338
            ||||||||||||||||| || ||||||||||| |||| |||||| |||||||| | |||
Sbjct: 802 cgcccagatgtactcgtcgtaggtgtggcgcttgatcaggttctcggtgtcgtacaggat 743

                                
Query: 339 gaagcctgagaacaccagagc 359
           |||||||||||| ||||||||
Sbjct: 742 gaagcctgagaagaccagagc 722



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 126/153 (82%)
 Strand = Plus / Minus

                                                                       
Query: 475 aattccttgcccttctttgaagcccagaatgtgtacgcagtcagagagacaaccacagct 534
           |||||||||||||||||||| |||||||| |  |||||||||||||| || |||||  | 
Sbjct: 606 aattccttgcccttctttgacgcccagaaagcatacgcagtcagagaaaccaccacgcca 547

                                                                       
Query: 535 gaggtcagtaccaaagcctgaagcacaatggttccttcagtgtttgcacaagccacacca 594
           |  ||||| || |||||||  || || ||  | ||||  ||||| |||||||||||||| 
Sbjct: 546 gccgtcagcactaaagcctccagaacgattttcccttgggtgttagcacaagccacaccg 487

                                            
Query: 595 atgctgaagctcaagcacagagtgaacaaaccc 627
           |||||||||||||||||||  ||||||| ||||
Sbjct: 486 atgctgaagctcaagcacaacgtgaacagaccc 454
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>gb|AY104589.1| Zea mays PCO067801 mRNA sequence
          Length = 1197

 Score =  137 bits (69), Expect = 5e-29
 Identities = 123/141 (87%)
 Strand = Plus / Minus

                                                                       
Query: 219 cctgagcatctgtaggatggtgaggaacaggttgaggatgtcgaggtaaagttcaacaga 278
           ||||||||| |  ||||||| |||||||||||| |||||||||||||| ||  |||| ||
Sbjct: 908 cctgagcatgttcaggatggagaggaacaggttcaggatgtcgaggtacagcccaaccga 849

                                                                       
Query: 279 agcccagatgtactcgtcataagtgtggcgctttatcaagttctcagtgtcgtagacgat 338
            ||||||||||||||||| || ||||||||||| |||| |||||| |||||||| | |||
Sbjct: 848 cgcccagatgtactcgtcgtaggtgtggcgcttgatcaggttctcggtgtcgtacaggat 789

                                
Query: 339 gaagcctgagaacaccagagc 359
           |||||||||||| ||||||||
Sbjct: 788 gaagcctgagaagaccagagc 768



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 126/153 (82%)
 Strand = Plus / Minus

                                                                       
Query: 475 aattccttgcccttctttgaagcccagaatgtgtacgcagtcagagagacaaccacagct 534
           |||||||||||||||||||| |||||||| |  |||||||||||||| || |||||  | 
Sbjct: 652 aattccttgcccttctttgacgcccagaaagcatacgcagtcagagaaaccaccacgcca 593

                                                                       
Query: 535 gaggtcagtaccaaagcctgaagcacaatggttccttcagtgtttgcacaagccacacca 594
           |  ||||| || |||||||  || || ||  | ||||  ||||| |||||||||||||| 
Sbjct: 592 gccgtcagcactaaagcctccagaacgattttcccttgggtgttagcacaagccacaccg 533

                                            
Query: 595 atgctgaagctcaagcacagagtgaacaaaccc 627
           |||||||||||||||||||  ||||||| ||||
Sbjct: 532 atgctgaagctcaagcacaacgtgaacagaccc 500
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>gb|AC162030.8| Medicago truncatula clone mth2-178b21, complete sequence
          Length = 85986

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                      
Query: 463   ccaaggtaactaaattccttgcccttctttgaagcccagaa 503
             |||||||| ||||| |||||||||||||| |||||||||||
Sbjct: 72378 ccaaggtagctaaaatccttgcccttcttggaagcccagaa 72418



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 78/95 (82%)
 Strand = Plus / Plus

                                                                         
Query: 241   aggaacaggttgaggatgtcgaggtaaagttcaacagaagcccagatgtactcgtcataa 300
             ||||||||||| || |||||||| |||||    ||||| ||||  ||||| || ||||||
Sbjct: 71398 aggaacaggttcagaatgtcgagataaagagtgacagaggccccaatgtattcatcataa 71457

                                                
Query: 301   gtgtggcgctttatcaagttctcagtgtcgtagac 335
             || |||||||| ||||  || ||||||||||||||
Sbjct: 71458 gtatggcgcttgatcagattgtcagtgtcgtagac 71492
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>gb|BT014050.1| Lycopersicon esculentum clone 133147F, mRNA sequence
          Length = 1164

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                           
Query: 478 tccttgcccttctttgaagcccagaatgtgta 509
           |||||||||||||| |||||||||||||||||
Sbjct: 496 tccttgcccttcttagaagcccagaatgtgta 465
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>ref|XM_367013.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein
           (MG03089.4) partial mRNA
          Length = 849

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 232 aggatggtgaggaacaggttgaggatgtcgaggta 266
           ||||||| |||||||||||||| ||||||||||||
Sbjct: 818 aggatggcgaggaacaggttgatgatgtcgaggta 784
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>ref|XM_748615.1| Aspergillus fumigatus Af293 hypothetical protein (Afu5g09310)
           partial mRNA
          Length = 846

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 241 aggaacaggttgaggatgtcgaggtaaag 269
           |||||||||||||||||||| ||||||||
Sbjct: 773 aggaacaggttgaggatgtccaggtaaag 745
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>emb|AJ879936.2| Capsicum chinense mRNA for putative receptor associated protein
           (ORF1)
          Length = 1037

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 279 agcccagatgtactcgtcataagtgtggcgctt 311
           ||||||||||||||| |||||||||| ||||||
Sbjct: 756 agcccagatgtactcatcataagtgtagcgctt 724
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>ref|NM_116196.1| Arabidopsis thaliana glutamate binding AT3G63310 mRNA, complete cds
          Length = 720

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 273 aacagaagcccagatgtactcgtcataagtgtggcgctttatcaagtt 320
           ||||| ||||||||||||||||||||| | ||| | ||| ||||||||
Sbjct: 651 aacagcagcccagatgtactcgtcataggagtgcctcttgatcaagtt 604
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>gb|BT020236.1| Arabidopsis thaliana At3g63310 gene, complete cds
          Length = 892

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 273 aacagaagcccagatgtactcgtcataagtgtggcgctttatcaagtt 320
           ||||| ||||||||||||||||||||| | ||| | ||| ||||||||
Sbjct: 741 aacagcagcccagatgtactcgtcataggagtgcctcttgatcaagtt 694
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>ref|XM_476832.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1205

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 483 gcccttctttgaagcccagaatgtgtacgcagtcag 518
           |||| |||||| ||||||||||||||| ||||||||
Sbjct: 619 gcccctctttgcagcccagaatgtgtaggcagtcag 584



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 280 gcccagatgtactcgtcataagtgtggcgctttatcaagttctcagtgtcgtagacgatg 339
           ||||||| ||||| ||| || |||| |||||| || | ||| || |||||||||||||||
Sbjct: 822 gcccagacgtactggtcgtaggtgtagcgcttgatgatgttgtccgtgtcgtagacgatg 763

                
Query: 340 aagcc 344
            ||||
Sbjct: 762 tagcc 758
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>ref|XM_476831.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 923

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 325 gtgtcgtagacgatgaagcctgagaacaccag 356
           |||||||||| ||||||||| |||||||||||
Sbjct: 626 gtgtcgtagatgatgaagccggagaacaccag 595
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>emb|AL163818.1|ATMAA21 Arabidopsis thaliana DNA chromosome 3, P1 clone MAA21 (ESSA project)
          Length = 79153

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                             
Query: 273   aacagaagcccagatgtactcgtcataagtgtggcgctttatcaagtt 320
             ||||| ||||||||||||||||||||| | ||| | ||| ||||||||
Sbjct: 10307 aacagcagcccagatgtactcgtcataggagtgcctcttgatcaagtt 10354
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>emb|AL138648.2|ATF16M2 Arabidopsis thaliana DNA chromosome 3, BAC clone F16M2
          Length = 75106

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                             
Query: 273   aacagaagcccagatgtactcgtcataagtgtggcgctttatcaagtt 320
             ||||| ||||||||||||||||||||| | ||| | ||| ||||||||
Sbjct: 55690 aacagcagcccagatgtactcgtcataggagtgcctcttgatcaagtt 55737
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                   
Query: 483     gcccttctttgaagcccagaatgtgtacgcagtcag 518
               |||| |||||| ||||||||||||||| ||||||||
Sbjct: 4122063 gcccctctttgcagcccagaatgtgtaggcagtcag 4122098



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                               
Query: 325     gtgtcgtagacgatgaagcctgagaacaccag 356
               |||||||||| ||||||||| |||||||||||
Sbjct: 4119903 gtgtcgtagatgatgaagccggagaacaccag 4119934



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                           
Query: 280     gcccagatgtactcgtcataagtgtggcgctttatcaagttctcagtgtcgtagacgatg 339
               ||||||| ||||| ||| || |||| |||||| || | ||| || |||||||||||||||
Sbjct: 4121765 gcccagacgtactggtcgtaggtgtagcgcttgatgatgttgtccgtgtcgtagacgatg 4121824

                    
Query: 340     aagcc 344
                ||||
Sbjct: 4121825 tagcc 4121829
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>dbj|AP003826.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1361_E02
          Length = 100168

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                
Query: 483  gcccttctttgaagcccagaatgtgtacgcagtcag 518
            |||| |||||| ||||||||||||||| ||||||||
Sbjct: 5685 gcccctctttgcagcccagaatgtgtaggcagtcag 5720



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                            
Query: 325  gtgtcgtagacgatgaagcctgagaacaccag 356
            |||||||||| ||||||||| |||||||||||
Sbjct: 3525 gtgtcgtagatgatgaagccggagaacaccag 3556



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                        
Query: 280  gcccagatgtactcgtcataagtgtggcgctttatcaagttctcagtgtcgtagacgatg 339
            ||||||| ||||| ||| || |||| |||||| || | ||| || |||||||||||||||
Sbjct: 5387 gcccagacgtactggtcgtaggtgtagcgcttgatgatgttgtccgtgtcgtagacgatg 5446

                 
Query: 340  aagcc 344
             ||||
Sbjct: 5447 tagcc 5451
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>dbj|AP004307.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0534H07
          Length = 144689

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                  
Query: 483    gcccttctttgaagcccagaatgtgtacgcagtcag 518
              |||| |||||| ||||||||||||||| ||||||||
Sbjct: 114921 gcccctctttgcagcccagaatgtgtaggcagtcag 114956



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                              
Query: 325    gtgtcgtagacgatgaagcctgagaacaccag 356
              |||||||||| ||||||||| |||||||||||
Sbjct: 112761 gtgtcgtagatgatgaagccggagaacaccag 112792



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                          
Query: 280    gcccagatgtactcgtcataagtgtggcgctttatcaagttctcagtgtcgtagacgatg 339
              ||||||| ||||| ||| || |||| |||||| || | ||| || |||||||||||||||
Sbjct: 114623 gcccagacgtactggtcgtaggtgtagcgcttgatgatgttgtccgtgtcgtagacgatg 114682

                   
Query: 340    aagcc 344
               ||||
Sbjct: 114683 tagcc 114687
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>dbj|AK073781.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068H10, full
           insert sequence
          Length = 1203

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 483 gcccttctttgaagcccagaatgtgtacgcagtcag 518
           |||| |||||| ||||||||||||||| ||||||||
Sbjct: 617 gcccctctttgcagcccagaatgtgtaggcagtcag 582



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 280 gcccagatgtactcgtcataagtgtggcgctttatcaagttctcagtgtcgtagacgatg 339
           ||||||| ||||| ||| || |||| |||||| || | ||| || |||||||||||||||
Sbjct: 820 gcccagacgtactggtcgtaggtgtagcgcttgatgatgttgtccgtgtcgtagacgatg 761

                
Query: 340 aagcc 344
            ||||
Sbjct: 760 tagcc 756
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>dbj|AK070925.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023070O07, full
           insert sequence
          Length = 922

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 325 gtgtcgtagacgatgaagcctgagaacaccag 356
           |||||||||| ||||||||| |||||||||||
Sbjct: 625 gtgtcgtagatgatgaagccggagaacaccag 594
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>gb|BT021132.1| Arabidopsis thaliana At3g63310 gene, complete cds
          Length = 720

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 273 aacagaagcccagatgtactcgtcataagtgtggcgctttatcaagtt 320
           ||||| ||||||||||||||||||||| | ||| | ||| ||||||||
Sbjct: 651 aacagcagcccagatgtactcgtcataggagtgcctcttgatcaagtt 604
to top
>emb|BX470168.7| Zebrafish DNA sequence from clone CH211-288L20 in linkage group 6,
              complete sequence
          Length = 148605

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 69     ggcctcatctctggatgatggca 91
              |||||||||||||||||||||||
Sbjct: 134372 ggcctcatctctggatgatggca 134350
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>emb|BX322791.7| Zebrafish DNA sequence from clone RP71-55E12, complete sequence
          Length = 127643

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 69     ggcctcatctctggatgatggca 91
              |||||||||||||||||||||||
Sbjct: 113305 ggcctcatctctggatgatggca 113283
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>emb|BX825703.1|CNS0A67U Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL57ZF05 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 998

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 273 aacagaagcccagatgtactcgtcata 299
           ||||| |||||||||||||||||||||
Sbjct: 769 aacagcagcccagatgtactcgtcata 743
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>gb|AY110080.1| Zea mays CL3663_1 mRNA sequence
          Length = 765

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 325 gtgtcgtagacgatgaagcctgagaacacca 355
           ||||| |||||||||||||| ||||||||||
Sbjct: 442 gtgtcatagacgatgaagcccgagaacacca 412
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>gb|BT014369.1| Lycopersicon esculentum clone 133657R, mRNA sequence
          Length = 1241

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 274 acagaagcccagatgtactcgtcataagtgtggcgctt 311
           |||| ||||||||||||||| || ||||||| ||||||
Sbjct: 680 acagcagcccagatgtactcatcgtaagtgtagcgctt 643
to top
>gb|BT014225.1| Lycopersicon esculentum clone 133420R, mRNA sequence
          Length = 1133

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 279 agcccagatgtactcgtcataagtgt 304
           ||||||||||||||| ||||||||||
Sbjct: 729 agcccagatgtactcatcataagtgt 704
to top
>gb|AC159332.11| Mus musculus 6 BAC RP23-413D8 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 208808

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 62     gtactttggcctcatctctgga 83
              ||||||||||||||||||||||
Sbjct: 115436 gtactttggcctcatctctgga 115415
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>ref|NM_001016838.2| Xenopus tropicalis hypothetical protein LOC549592 (LOC549592), mRNA
          Length = 1410

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 579 tgcacaagccacaccaatgctgaag 603
           |||| ||||||||||||||||||||
Sbjct: 662 tgcagaagccacaccaatgctgaag 686
to top
>ref|XM_389598.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09422.1)
           partial mRNA
          Length = 831

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 241 aggaacaggttgaggatgtcgaggtaaag 269
           ||||| ||||||| |||||||||||||||
Sbjct: 791 aggaagaggttgatgatgtcgaggtaaag 763
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>gb|DQ397838.1| Cenarchaeum symbiosum clone C03H05, complete sequence
          Length = 39721

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 258   gtcgaggtaaagttcaacaga 278
             |||||||||||||||||||||
Sbjct: 32776 gtcgaggtaaagttcaacaga 32796
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>dbj|AB194635.1| Leek yellow stripe virus gene for coat protein, partial cds,
           isolate: Korea:Import.#2
          Length = 864

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 233 ggatggtgaggaacaggttga 253
           |||||||||||||||||||||
Sbjct: 468 ggatggtgaggaacaggttga 488
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>dbj|AB194634.1| Leek yellow stripe virus gene for coat protein, partial cds,
           isolate: Korea:Import.#1
          Length = 864

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 233 ggatggtgaggaacaggttga 253
           |||||||||||||||||||||
Sbjct: 468 ggatggtgaggaacaggttga 488
to top
>gb|AC007156.2|AC007156 Homo sapiens chromosome 18, clone hRPK.419_J_16, complete sequence
          Length = 203591

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 68     tggcctcatctctggatgatg 88
              |||||||||||||||||||||
Sbjct: 154447 tggcctcatctctggatgatg 154427
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>emb|CR855480.2| Xenopus tropicalis finished cDNA, clone TNeu095j18
          Length = 1410

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 579 tgcacaagccacaccaatgctgaag 603
           |||| ||||||||||||||||||||
Sbjct: 662 tgcagaagccacaccaatgctgaag 686
to top
>dbj|AP005271.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-752I5, complete
              sequence
          Length = 200108

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 68     tggcctcatctctggatgatg 88
              |||||||||||||||||||||
Sbjct: 116968 tggcctcatctctggatgatg 116988
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>gb|AC116130.15| Mus musculus chromosome 17, clone RP23-98F21, complete sequence
          Length = 228842

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 589    acaccaatgctgaagctcaa 608
              ||||||||||||||||||||
Sbjct: 205876 acaccaatgctgaagctcaa 205857
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>gb|AC167969.2| Mus musculus BAC clone RP24-446H24 from chromosome 17, complete sequence
          Length = 178774

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 594    aatgctgaagctcaagcaca 613
              ||||||||||||||||||||
Sbjct: 139951 aatgctgaagctcaagcaca 139970
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>ref|XM_359291.3| PREDICTED: Mus musculus ring finger protein 39, transcript variant 1
            (Rnf39), mRNA
          Length = 3401

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 589  acaccaatgctgaagctcaa 608
            ||||||||||||||||||||
Sbjct: 2480 acaccaatgctgaagctcaa 2499
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>gb|AC129311.6| Mus musculus BAC clone RP24-404P10 from chromosome 3, complete sequence
          Length = 160537

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 488   tctttgaagcccagaatgtg 507
             ||||||||||||||||||||
Sbjct: 38288 tctttgaagcccagaatgtg 38307
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>ref|XM_849968.1| PREDICTED: Canis familiaris similar to Cylicin-2 (Cylicin II)
           (Multiple-band polypeptide II) (LOC612232), mRNA
          Length = 1059

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 478 tccttgcccttctttgaagc 497
           ||||||||||||||||||||
Sbjct: 713 tccttgcccttctttgaagc 694
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>gb|AC122384.3| Mus musculus BAC clone RP24-63P8 from chromosome 17, complete sequence
          Length = 190880

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 594   aatgctgaagctcaagcaca 613
             ||||||||||||||||||||
Sbjct: 33743 aatgctgaagctcaagcaca 33762
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>gb|BC072645.1| Mus musculus DNA segment, Chr 4, ERATO Doi 429, expressed, transcript
            variant 1, mRNA (cDNA clone MGC:100008 IMAGE:30357476),
            complete cds
          Length = 4655

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 343  cctgagaacaccagagctcc 362
            ||||||||||||||||||||
Sbjct: 3584 cctgagaacaccagagctcc 3603
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>gb|AC138769.4| Mus musculus chromosome 18 clone RP23-235B1, complete sequence
          Length = 189897

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 146    taaaggttggacatatgacc 165
              ||||||||||||||||||||
Sbjct: 143135 taaaggttggacatatgacc 143154
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>emb|AL034348.5|HS84D21 Human DNA sequence from clone RP1-84D21 on chromosome 6q15-16.3,
             complete sequence
          Length = 120514

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 592   ccaatgctgaagctcaagca 611
             ||||||||||||||||||||
Sbjct: 28970 ccaatgctgaagctcaagca 28989
to top
>emb|CR860476.1| Pongo pygmaeus mRNA; cDNA DKFZp459C011 (from clone DKFZp459C011)
          Length = 3988

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 579 tgcacaagccacaccaatgctgaa 602
           |||| |||||||||||||||||||
Sbjct: 776 tgcagaagccacaccaatgctgaa 799
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>emb|CR858051.1| Pongo pygmaeus mRNA; cDNA DKFZp459H1130 (from clone DKFZp459H1130)
          Length = 3990

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 579 tgcacaagccacaccaatgctgaa 602
           |||| |||||||||||||||||||
Sbjct: 783 tgcagaagccacaccaatgctgaa 806
to top
>gb|AF097907.1| Rana catesbeiana myosin heavy chain (MHC-4) mRNA, partial cds
          Length = 2584

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 232 aggatggtgaggaacaggttgagg 255
           |||||| |||||||||||||||||
Sbjct: 867 aggatgctgaggaacaggttgagg 890
to top
>gb|DQ397875.1| Cenarchaeum symbiosum clone C07F02, complete sequence
          Length = 41724

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 258 gtcgaggtaaagttcaacag 277
           ||||||||||||||||||||
Sbjct: 674 gtcgaggtaaagttcaacag 693
to top
>gb|DQ397873.1| Cenarchaeum symbiosum clone C13A11, complete sequence
          Length = 40499

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 258   gtcgaggtaaagttcaacag 277
             ||||||||||||||||||||
Sbjct: 33807 gtcgaggtaaagttcaacag 33788
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>gb|DQ397858.1| Cenarchaeum symbiosum clone C05G02, complete sequence
          Length = 39265

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 258  gtcgaggtaaagttcaacag 277
            ||||||||||||||||||||
Sbjct: 8802 gtcgaggtaaagttcaacag 8783
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>gb|DQ397630.1| Cenarchaeum symbiosum clone C01C08, complete sequence
          Length = 44451

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 258   gtcgaggtaaagttcaacag 277
             ||||||||||||||||||||
Sbjct: 41025 gtcgaggtaaagttcaacag 41006
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>dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102
          Length = 1779707

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 479     ccttgcccttctttgaagcc 498
               ||||||||||||||||||||
Sbjct: 1654032 ccttgcccttctttgaagcc 1654051
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>dbj|AK162607.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:9630054D02 product:protein
            phosphatase 1, regulatory (inhibitor) subunit 11, full
            insert sequence
          Length = 1564

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 589  acaccaatgctgaagctcaa 608
            ||||||||||||||||||||
Sbjct: 1292 acaccaatgctgaagctcaa 1273
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>gb|DQ060521.1| Bean yellow mosaic virus polyprotein mRNA, partial cds
          Length = 1630

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 233  ggatggtgaggaacaggttg 252
            ||||||||||||||||||||
Sbjct: 1062 ggatggtgaggaacaggttg 1081
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>dbj|AK078532.1| Mus musculus 12 days embryo female mullerian duct includes
            surrounding region cDNA, RIKEN full-length enriched
            library, clone:6820436J17 product:hypothetical protein,
            full insert sequence
          Length = 3656

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 343  cctgagaacaccagagctcc 362
            ||||||||||||||||||||
Sbjct: 2606 cctgagaacaccagagctcc 2625
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>gb|AF532114.1| Mus musculus strain 129/SvJ BAC clone citb544e14 from the MHC region,
             complete sequence
          Length = 153869

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 589   acaccaatgctgaagctcaa 608
             ||||||||||||||||||||
Sbjct: 22021 acaccaatgctgaagctcaa 22040
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>gb|AF532112.1| Mus musculus strain 129/SvJ BAC clone citb20h22 from the MHC region,
              complete sequence
          Length = 172199

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 589    acaccaatgctgaagctcaa 608
              ||||||||||||||||||||
Sbjct: 116437 acaccaatgctgaagctcaa 116456
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>gb|AC026736.4|AC026736 Homo sapiens chromosome 5 clone CTD-2350M8, complete sequence
          Length = 108661

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 51    acatattggttgtactttgg 70
             ||||||||||||||||||||
Sbjct: 99455 acatattggttgtactttgg 99474
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>gb|AC005960.1|AC005960 Mus musculus chromosome 17 BAC citb20h22 from the MHC region, complete
              sequence
          Length = 158414

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 589    acaccaatgctgaagctcaa 608
              ||||||||||||||||||||
Sbjct: 116419 acaccaatgctgaagctcaa 116438
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>ref|NM_001025106.1| Mus musculus DNA segment, Chr 4, ERATO Doi 429, expressed
            (D4Ertd429e), transcript variant 1, mRNA
          Length = 4620

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 343  cctgagaacaccagagctcc 362
            ||||||||||||||||||||
Sbjct: 3584 cctgagaacaccagagctcc 3603
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>emb|CR956641.9| Mouse DNA sequence from clone RP23-77N9 on chromosome 17, complete
             sequence
          Length = 202624

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 589   acaccaatgctgaagctcaa 608
             ||||||||||||||||||||
Sbjct: 69371 acaccaatgctgaagctcaa 69352
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>emb|AL626808.28| Mouse DNA sequence from clone RP23-383I7 on chromosome 4, complete
             sequence
          Length = 203992

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 343   cctgagaacaccagagctcc 362
             ||||||||||||||||||||
Sbjct: 25271 cctgagaacaccagagctcc 25252


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,004,663
Number of Sequences: 3902068
Number of extensions: 5004663
Number of successful extensions: 101885
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101692
Number of HSP's gapped (non-prelim): 192
length of query: 627
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 604
effective length of database: 17,143,297,704
effective search space: 10354551813216
effective search space used: 10354551813216
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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