>emb|AL049542.10|HSC196A12 Human DNA sequence from clone RP1-196A12 on chromosome 16 Contains part
             of the RAB11FIP3 gene, complete sequence
          Length = 58885

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 78    tcaaacaacaatgtcaccttcc 99
             ||||||||||||||||||||||
Sbjct: 38740 tcaaacaacaatgtcaccttcc 38719

>gb|AE006463.1| Homo sapiens 16p13.3 sequence section 2 of 8
          Length = 260418

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 78     tcaaacaacaatgtcaccttcc 99
              ||||||||||||||||||||||
Sbjct: 207566 tcaaacaacaatgtcaccttcc 207545

>ref|XM_541504.2| PREDICTED: Canis familiaris similar to potassium voltage-gated
            channel, shaker-related subfamily, member 7 (LOC484389),
            mRNA
          Length = 1435

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 526  ggaaacatatggtcaccgaag 546
            |||||||||||||||||||||
Sbjct: 1377 ggaaacatatggtcaccgaag 1397

>gb|AC134837.3| Mus musculus BAC clone RP24-338L20 from chromosome 16, complete sequence
          Length = 175319

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 236    gaagcccctaaatttgtacagaaa 259
              |||||||||||||||||| |||||
Sbjct: 151077 gaagcccctaaatttgtatagaaa 151054

>ref|XM_743520.1| Aspergillus fumigatus Af293 dihydroxy-acetone synthase (Afu3g02910)
            partial mRNA
          Length = 2145

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 186  ggtaaacatggcatgtaagg 205
            ||||||||||||||||||||
Sbjct: 1179 ggtaaacatggcatgtaagg 1198

>gb|AC131691.4| Mus musculus BAC clone RP23-388P2 from chromosome 16, complete sequence
          Length = 202652

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 236    gaagcccctaaatttgtacagaaa 259
              |||||||||||||||||| |||||
Sbjct: 158931 gaagcccctaaatttgtatagaaa 158954

>gb|AY436640.1| Homo sapiens breast cancer 2, early onset (BRCA2) gene, complete cds
          Length = 86101

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 246   aatttgtacagaaacctaag 265
             ||||||||||||||||||||
Sbjct: 71820 aatttgtacagaaacctaag 71801

>gb|AY644518.1| Bos taurus T cell receptor gamma gene, partial sequence
          Length = 188109

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 343   catttcactccctccagttg 362
             ||||||||||||||||||||
Sbjct: 77737 catttcactccctccagttg 77756

>emb|AL445212.9| Human DNA sequence from clone RP11-37E23 on chromosome 13 Contains the 3'
              end of a novel gene (CG003, 13CDNA73), 2 novel genes, the
              5' end of the  BRCA2 gene for breast cancer 2, early onset
              and a interferon-induced protein with tetratricopeptide
              repeats 1 (IFIT1) pseudogene, complete sequence
          Length = 166657

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 246    aatttgtacagaaacctaag 265
              ||||||||||||||||||||
Sbjct: 154207 aatttgtacagaaacctaag 154188

>gb|AC108515.3| Homo sapiens BAC clone RP11-431J17 from 4, complete sequence
          Length = 90286

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    ccccttcaaacaacaatgtc 92
             ||||||||||||||||||||
Sbjct: 77087 ccccttcaaacaacaatgtc 77068

>gb|AC093814.3| Homo sapiens BAC clone RP11-362I16 from 4, complete sequence
          Length = 163201

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 104    ttttgctctgtgaccatcat 123
              ||||||||||||||||||||
Sbjct: 113691 ttttgctctgtgaccatcat 113672

>gb|AC154207.3| Mus musculus BAC clone RP24-377E1 from chromosome 13, complete sequence
          Length = 181174

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 318   agtatacctttcagagtagc 337
             ||||||||||||||||||||
Sbjct: 31682 agtatacctttcagagtagc 31701

>emb|BX649596.8| Zebrafish DNA sequence from clone CH211-69P4 in linkage group 14,
              complete sequence
          Length = 181055

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 186    ggtaaacatggcatgtaaggctct 209
              |||||||||| |||||||||||||
Sbjct: 168076 ggtaaacatgacatgtaaggctct 168099

>ref|XM_393150.2| PREDICTED: Apis mellifera similar to CG33196-PB (LOC409652), mRNA
          Length = 25860

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 299   atgtcaaagcatcttacaaa 318
             ||||||||||||||||||||
Sbjct: 17660 atgtcaaagcatcttacaaa 17641

>gb|AC154356.2| Mus musculus BAC clone RP23-189C20 from 13, complete sequence
          Length = 201031

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 318    agtatacctttcagagtagc 337
              ||||||||||||||||||||
Sbjct: 166630 agtatacctttcagagtagc 166649

>emb|Z74739.1|HS214K23 Human DNA sequence from clone RP1-214K23 on chromosome 13. Contains the
              3' end of a novel gene, a novel gene, the 5' end of the
              BRCA2 gene for early onset breast cancer protein 2, ESTs,
              STSs and GSSs, complete sequence
          Length = 127079

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 246    aatttgtacagaaacctaag 265
              ||||||||||||||||||||
Sbjct: 125334 aatttgtacagaaacctaag 125315

>emb|CR855860.7| Zebrafish DNA sequence from clone CH211-239D6 in linkage group 19,
             complete sequence
          Length = 90948

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 321   atacctttcagagtagcaaa 340
             ||||||||||||||||||||
Sbjct: 44573 atacctttcagagtagcaaa 44592

>emb|AL121852.3|CNS01DST Human chromosome 14 DNA sequence BAC R-159L20 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 167131

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 304    aaagcatcttacaaagtata 323
              ||||||||||||||||||||
Sbjct: 111233 aaagcatcttacaaagtata 111252


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,497,732
Number of Sequences: 3902068
Number of extensions: 3497732
Number of successful extensions: 72794
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72772
Number of HSP's gapped (non-prelim): 22
length of query: 567
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 544
effective length of database: 17,143,297,704
effective search space: 9325953950976
effective search space used: 9325953950976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)