ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd24c20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY483150.1| Hordeum vulgare putative cellulose synthase catal... 440 e-120
2gb|BT009438.1| Triticum aestivum clone wlmk4.pk0015.a11:fis, ful... 353 2e-94
3gb|BT009583.1| Triticum aestivum clone wre1n.pk0043.h8:fis, full... 345 5e-92
4dbj|AB158407.1| Triticum aestivum CesA mRNA for putative cellulo... 339 3e-90
5gb|DQ020213.1| Bambusa oldhamii cellulose synthase BoCesA5 mRNA,... 78 2e-11
6gb|DQ020212.1| Bambusa oldhamii cellulose synthase BoCesA4b mRNA... 74 3e-10
7ref|XM_477093.1| Oryza sativa (japonica cultivar-group), mRNA 70 4e-09
8dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 70 4e-09
9dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic D... 70 4e-09
10dbj|AP003837.2| Oryza sativa (japonica cultivar-group) genomic D... 70 4e-09
11dbj|AK072356.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 4e-09
12dbj|AK062007.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 4e-09
13gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 64 3e-07
14gb|AC145384.2| Oryza sativa chromosome 3 BAC OSJNBa0060M17 genom... 64 3e-07
15gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genom... 64 3e-07
16dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 64 3e-07
17dbj|AK069196.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 3e-07
18dbj|AK061688.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 3e-07
19ref|XM_470040.1| Oryza sativa (japonica cultivar-group), mRNA 60 4e-06
20gb|DQ020211.1| Bambusa oldhamii cellulose synthase BoCesA4a mRNA... 60 4e-06
21gb|AY095297.1| Populus tremuloides cellulose synthase (CesA2) mR... 52 0.001
22gb|AF200528.1|AF200528 Zea mays cellulose synthase-4 (CesA-4) mR... 50 0.004
23gb|AY108113.1| Zea mays PCO126465 mRNA sequence 50 0.004
24gb|BT018125.1| Zea mays clone EL01N0554C08.c mRNA sequence 48 0.015
25gb|AY483151.1| Hordeum vulgare putative cellulose synthase catal... 48 0.015
26gb|AF200533.1|AF200533 Zea mays cellulose synthase-9 (CesA-9) mR... 48 0.015
27gb|AY112236.1| Zea mays CL1160_1 mRNA sequence 48 0.015
28gb|DQ014507.1| Eucalyptus grandis cellulose synthase 3 (CesA3) m... 46 0.060
29emb|CR381579.22| Zebrafish DNA sequence from clone CH211-229N1 i... 42 0.93
30gb|DQ124074.1| Coffea arabica clone MN-SSH3-C06 mRNA sequence 42 0.93
31emb|AL772225.5| Mouse DNA sequence from clone RP23-235D17 on chr... 42 0.93
32gb|AC006037.2| Homo sapiens BAC clone RP11-263G22 from 2, comple... 42 0.93
33gb|BT019277.1| Zea mays clone Contig950.F mRNA sequence 40 3.7
34gb|AY055724.2| Populus tremuloides cellulose synthase (CesA5) mR... 40 3.7
35gb|AC004605.1|HUAC004605 Homo sapiens Chromosome 16 BAC clone CI... 40 3.7
36gb|AC125409.3| Mus musculus BAC clone RP23-127O4 from 12, comple... 40 3.7
37gb|AC122830.4| Mus musculus BAC clone RP23-224I23 from 8, comple... 40 3.7
38gb|AC116323.6| Mus musculus BAC clone RP23-281F3 from 8, complet... 40 3.7
39emb|AL354735.14| Human DNA sequence from clone RP11-738I14 on ch... 40 3.7
40emb|CR382379.6| Zebrafish DNA sequence from clone DKEY-175N5 in ... 40 3.7
41gb|AC091936.2| Homo sapiens chromosome 5 clone RP11-325C20, comp... 40 3.7
42gb|AC008972.8| Homo sapiens chromosome 5 clone CTD-2376I4, compl... 40 3.7
43gb|AC003103.2| Homo sapiens chromosome 17, clone CTC-268N12, com... 40 3.7
44gb|AC012642.5| Homo sapiens chromosome 5 clone CTD-2287K1, compl... 40 3.7
45gb|AC092128.3| Homo sapiens chromosome 16 clone RP11-133M24, com... 40 3.7
46gb|AC138627.1| Homo sapiens chromosome 16 clone RP11-42H13, comp... 40 3.7
47gb|AF200529.1|AF200529 Zea mays cellulose synthase-5 (CesA-5) mR... 40 3.7
48gb|AF200526.1|AF200526 Zea mays cellulose synthase-2 (CesA-2) mR... 40 3.7
49gb|AF200525.1|AF200525 Zea mays cellulose synthase-1 (CesA-1) mR... 40 3.7
50emb|AL845284.4| Zebrafish DNA sequence from clone DKEY-277C13, c... 40 3.7
51gb|AY110415.1| Zea mays CL1166_1 mRNA sequence 40 3.7
52gb|AY110079.1| Zea mays CL1164_1 mRNA sequence 40 3.7
53emb|AL049833.5|CNS0000D Human chromosome 14 DNA sequence BAC R-9... 40 3.7
54gb|AC134604.5| Mus musculus BAC clone RP23-296I5 from 12, comple... 40 3.7
55dbj|AP004509.1| Lotus japonicus genomic DNA, chromosome 6, clone... 40 3.7
56emb|AL133168.6|CNS01DU7 Human chromosome 14 DNA sequence BAC R-1... 40 3.7
57emb|AL132641.3|CNS01DT6 Human chromosome 14 DNA sequence BAC C-3... 40 3.7 
>gb|AY483150.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA1)
            mRNA, complete cds
          Length = 3605

 Score =  440 bits (222), Expect = e-120
 Identities = 261/277 (94%)
 Strand = Plus / Minus

                                                                        
Query: 7    gagcttaacctcatgaaaacggtagatggtctattncatctatttncngatgtgttttcc 66
            ||||||||||||||||||||||||||||||||||| ||||||||| |  |||||||||| 
Sbjct: 3482 gagcttaacctcatgaaaacggtagatggtctattacatctatttacaaatgtgttttcg 3423

                                                                        
Query: 67   caatntngacaactttctcaaacgtagtaattcgcaaccccaaacataaattttctctgg 126
            |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3422 caattttgacaactttctcaaacgtagtaattcgcaaccccaaacataaattttctctgg 3363

                                                                        
Query: 127  ctccacgggttgtcagtcgatcactgttatattttctgtctctacaatnttccattttcc 186
            |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 3362 ctccacgggttgtcagtcgatcactgttatattttctgtctctacaatctcccattttcc 3303

                                                                        
Query: 187  tagcagttgatgccacaggtttggatatnggggccagcgagacgngncctgaatggatca 246
            ||||||||||||||||||||||||||||  |||||||||||||| |   |||||||||||
Sbjct: 3302 tagcagttgatgccacaggtttggatatttgggccagcgagacgtgtagtgaatggatca 3243

                                                 
Query: 247  acacgaacccacagcaaggagaagattgaagccagga 283
            |||| ||||||||||||||||||||||||||||||||
Sbjct: 3242 acacaaacccacagcaaggagaagattgaagccagga 3206
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>gb|BT009438.1| Triticum aestivum clone wlmk4.pk0015.a11:fis, full insert mRNA
            sequence
          Length = 3626

 Score =  353 bits (178), Expect = 2e-94
 Identities = 251/277 (90%), Gaps = 1/277 (0%)
 Strand = Plus / Minus

                                                                        
Query: 7    gagcttaacctcatgaaaacggtagatggtctattncatctatttncngatgtgttttcc 66
            ||||||||||||||||||||||||||||||||||| ||||||||| |  |||||||||| 
Sbjct: 3480 gagcttaacctcatgaaaacggtagatggtctattacatctatttacaaatgtgttttct 3421

                                                                        
Query: 67   caatntngacaactttctcaaacgtagtaattcgcaaccccaaacataaattttctctgg 126
            |||| | |||||||||||||||||||||||||| ||||||||| ||||||| ||||||||
Sbjct: 3420 caattttgacaactttctcaaacgtagtaattcacaaccccaa-cataaatattctctgg 3362

                                                                        
Query: 127  ctccacgggttgtcagtcgatcactgttatattttctgtctctacaatnttccattttcc 186
            |||| ||||||||   |||||||||||||||||||||||||||||||  | ||| |||||
Sbjct: 3361 ctccgcgggttgttgctcgatcactgttatattttctgtctctacaaactcccactttcc 3302

                                                                        
Query: 187  tagcagttgatgccacaggtttggatatnggggccagcgagacgngncctgaatggatca 246
            ||||||||||||||||||||||||||||  |||||||||||||| |   |||||||||||
Sbjct: 3301 tagcagttgatgccacaggtttggatatttgggccagcgagacgggtagtgaatggatca 3242

                                                 
Query: 247  acacgaacccacagcaaggagaagattgaagccagga 283
            |||||||||||||||||||||||||| ||||| ||||
Sbjct: 3241 acacgaacccacagcaaggagaagatagaagcgagga 3205
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>gb|BT009583.1| Triticum aestivum clone wre1n.pk0043.h8:fis, full insert mRNA
           sequence
          Length = 993

 Score =  345 bits (174), Expect = 5e-92
 Identities = 250/277 (90%), Gaps = 1/277 (0%)
 Strand = Plus / Minus

                                                                       
Query: 7   gagcttaacctcatgaaaacggtagatggtctattncatctatttncngatgtgttttcc 66
           ||||||||||||||||||||||||||| ||||||| ||||||||| |  |||||||||| 
Sbjct: 959 gagcttaacctcatgaaaacggtagatagtctattacatctatttacaaatgtgttttct 900

                                                                       
Query: 67  caatntngacaactttctcaaacgtagtaattcgcaaccccaaacataaattttctctgg 126
           |||| | |||||||||||||||||||||||||| ||||||||| ||||||| ||||||||
Sbjct: 899 caattttgacaactttctcaaacgtagtaattcacaaccccaa-cataaatattctctgg 841

                                                                       
Query: 127 ctccacgggttgtcagtcgatcactgttatattttctgtctctacaatnttccattttcc 186
           |||||| ||| |||  |||||||||||||||||||||||||||||||  | ||| |||||
Sbjct: 840 ctccacaggtggtcgctcgatcactgttatattttctgtctctacaaactcccactttcc 781

                                                                       
Query: 187 tagcagttgatgccacaggtttggatatnggggccagcgagacgngncctgaatggatca 246
           ||||||||||||||||||||||||||||  |||||||||||||| |   |||||||||||
Sbjct: 780 tagcagttgatgccacaggtttggatatttgggccagcgagacgggtagtgaatggatca 721

                                                
Query: 247 acacgaacccacagcaaggagaagattgaagccagga 283
           |||||||||||||||||||||||||| ||||| ||||
Sbjct: 720 acacgaacccacagcaaggagaagatagaagcgagga 684
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>dbj|AB158407.1| Triticum aestivum CesA mRNA for putative cellulose synthase, complete
            cds
          Length = 3681

 Score =  339 bits (171), Expect = 3e-90
 Identities = 247/274 (90%), Gaps = 1/274 (0%)
 Strand = Plus / Minus

                                                                        
Query: 10   cttaacctcatgaaaacggtagatggtctattncatctatttncngatgtgttttcccaa 69
            |||||||||||||||||||||||||||||||| ||||||||| |  |||||||||| |||
Sbjct: 3503 cttaacctcatgaaaacggtagatggtctattacatctatttacaaatgtgttttctcaa 3444

                                                                        
Query: 70   tntngacaactttctcaaacgtagtaattcgcaaccccaaacataaattttctctggctc 129
            | | |||||||||||||||| ||||||||||||||||||  ||||||| |||||||||||
Sbjct: 3443 ttttgacaactttctcaaacatagtaattcgcaaccccag-cataaatattctctggctc 3385

                                                                        
Query: 130  cacgggttgtcagtcgatcactgttatattttctgtctctacaatnttccattttcctag 189
            ||| ||| |||  |||||||||||||||||||||||||||||||  | ||| ||||||||
Sbjct: 3384 cacaggtggtcgctcgatcactgttatattttctgtctctacaaactcccactttcctag 3325

                                                                        
Query: 190  cagttgatgccacaggtttggatatnggggccagcgagacgngncctgaatggatcaaca 249
            |||||||||||||||||||||||||  |||||||||||||| |   ||||||||||||||
Sbjct: 3324 cagttgatgccacaggtttggatatttgggccagcgagacgggtagtgaatggatcaaca 3265

                                              
Query: 250  cgaacccacagcaaggagaagattgaagccagga 283
            ||||||||||||||||||||||| ||||| ||||
Sbjct: 3264 cgaacccacagcaaggagaagatagaagcgagga 3231
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>gb|DQ020213.1| Bambusa oldhamii cellulose synthase BoCesA5 mRNA, complete cds
          Length = 3613

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 75/88 (85%)
 Strand = Plus / Minus

                                                                        
Query: 185  cctagcagttgatgccacaggtttggatatnggggccagcgagacgngncctgaatggat 244
            |||||||||||||||||||  ||||| |||  ||||||| ||  || |   |||||||||
Sbjct: 3452 cctagcagttgatgccacacttttgggtatctgggccagtgacccgggtggtgaatggat 3393

                                        
Query: 245  caacacgaacccacagcaaggagaagat 272
            ||| ||||||||||||||||||||||||
Sbjct: 3392 caatacgaacccacagcaaggagaagat 3365
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>gb|DQ020212.1| Bambusa oldhamii cellulose synthase BoCesA4b mRNA, partial cds
          Length = 3409

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 85/102 (83%)
 Strand = Plus / Minus

                                                                        
Query: 182  tttcctagcagttgatgccacaggtttggatatnggggccagcgagacgngncctgaatg 241
            |||||||||| ||||||||||| |||||| |||  ||||||| ||  || |   |||| |
Sbjct: 3208 tttcctagcaattgatgccacatgtttgggtatctgggccagtgacgcgggtggtgaacg 3149

                                                      
Query: 242  gatcaacacgaacccacagcaaggagaagattgaagccagga 283
            ||||||  ||||||||||||||||||||||| ||||| ||||
Sbjct: 3148 gatcaatgcgaacccacagcaaggagaagatcgaagcaagga 3107
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>ref|XM_477093.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3954

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 83/100 (83%)
 Strand = Plus / Minus

                                                                        
Query: 182  tttcctagcagttgatgccacaggtttggatatnggggccagcgagacgngncctgaatg 241
            |||| ||||||||||||||||| |||||| |||  ||||| | || ||| |   ||||||
Sbjct: 3686 tttcttagcagttgatgccacatgtttgggtatctgggccggtgacacgggtggtgaatg 3627

                                                    
Query: 242  gatcaacacgaacccacagcaaggagaagattgaagccag 281
            |||| |  |||||||||||||| |||||||| ||||||||
Sbjct: 3626 gatcgatgcgaacccacagcaatgagaagatcgaagccag 3587
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 83/100 (83%)
 Strand = Plus / Plus

                                                                           
Query: 182     tttcctagcagttgatgccacaggtttggatatnggggccagcgagacgngncctgaatg 241
               |||| ||||||||||||||||| |||||| |||  ||||| | || ||| |   ||||||
Sbjct: 5885203 tttcttagcagttgatgccacatgtttgggtatctgggccggtgacacgggtggtgaatg 5885262

                                                       
Query: 242     gatcaacacgaacccacagcaaggagaagattgaagccag 281
               |||| |  |||||||||||||| |||||||| ||||||||
Sbjct: 5885263 gatcgatgcgaacccacagcaatgagaagatcgaagccag 5885302
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>dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1136_A05
          Length = 120823

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 83/100 (83%)
 Strand = Plus / Plus

                                                                         
Query: 182   tttcctagcagttgatgccacaggtttggatatnggggccagcgagacgngncctgaatg 241
             |||| ||||||||||||||||| |||||| |||  ||||| | || ||| |   ||||||
Sbjct: 27651 tttcttagcagttgatgccacatgtttgggtatctgggccggtgacacgggtggtgaatg 27710

                                                     
Query: 242   gatcaacacgaacccacagcaaggagaagattgaagccag 281
             |||| |  |||||||||||||| |||||||| ||||||||
Sbjct: 27711 gatcgatgcgaacccacagcaatgagaagatcgaagccag 27750
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>dbj|AP003837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1559_F09
          Length = 87792

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 83/100 (83%)
 Strand = Plus / Plus

                                                                         
Query: 182   tttcctagcagttgatgccacaggtttggatatnggggccagcgagacgngncctgaatg 241
             |||| ||||||||||||||||| |||||| |||  ||||| | || ||| |   ||||||
Sbjct: 59877 tttcttagcagttgatgccacatgtttgggtatctgggccggtgacacgggtggtgaatg 59936

                                                     
Query: 242   gatcaacacgaacccacagcaaggagaagattgaagccag 281
             |||| |  |||||||||||||| |||||||| ||||||||
Sbjct: 59937 gatcgatgcgaacccacagcaatgagaagatcgaagccag 59976
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>dbj|AK072356.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023059I02, full
            insert sequence
          Length = 3954

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 83/100 (83%)
 Strand = Plus / Minus

                                                                        
Query: 182  tttcctagcagttgatgccacaggtttggatatnggggccagcgagacgngncctgaatg 241
            |||| ||||||||||||||||| |||||| |||  ||||| | || ||| |   ||||||
Sbjct: 3686 tttcttagcagttgatgccacatgtttgggtatctgggccggtgacacgggtggtgaatg 3627

                                                    
Query: 242  gatcaacacgaacccacagcaaggagaagattgaagccag 281
            |||| |  |||||||||||||| |||||||| ||||||||
Sbjct: 3626 gatcgatgcgaacccacagcaatgagaagatcgaagccag 3587
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>dbj|AK062007.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-E01, full
           insert sequence
          Length = 1241

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 83/100 (83%)
 Strand = Plus / Minus

                                                                       
Query: 182 tttcctagcagttgatgccacaggtttggatatnggggccagcgagacgngncctgaatg 241
           |||| ||||||||||||||||| |||||| |||  ||||| | || ||| |   ||||||
Sbjct: 973 tttcttagcagttgatgccacatgtttgggtatctgggccggtgacacgggtggtgaatg 914

                                                   
Query: 242 gatcaacacgaacccacagcaaggagaagattgaagccag 281
           |||| |  |||||||||||||| |||||||| ||||||||
Sbjct: 913 gatcgatgcgaacccacagcaatgagaagatcgaagccag 874
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 74/89 (83%)
 Strand = Plus / Plus

                                                                            
Query: 184      tcctagcagttgatgccacaggtttggatatnggggccagcgagacgngncctgaatgga 243
                |||||||||||||| |||||  ||||| |||  ||||| | || ||| |   ||||||||
Sbjct: 33476873 tcctagcagttgataccacatttttgggtatcagggcctgtgacacgggtggtgaatgga 33476932

                                             
Query: 244      tcaacacgaacccacagcaaggagaagat 272
                || | ||||||||||||||||||||||||
Sbjct: 33476933 tcgatacgaacccacagcaaggagaagat 33476961
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>gb|AC145384.2| Oryza sativa chromosome 3 BAC OSJNBa0060M17 genomic sequence,
            complete sequence
          Length = 41693

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 74/89 (83%)
 Strand = Plus / Plus

                                                                        
Query: 184  tcctagcagttgatgccacaggtttggatatnggggccagcgagacgngncctgaatgga 243
            |||||||||||||| |||||  ||||| |||  ||||| | || ||| |   ||||||||
Sbjct: 6100 tcctagcagttgataccacatttttgggtatcagggcctgtgacacgggtggtgaatgga 6159

                                         
Query: 244  tcaacacgaacccacagcaaggagaagat 272
            || | ||||||||||||||||||||||||
Sbjct: 6160 tcgatacgaacccacagcaaggagaagat 6188
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>gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genomic sequence, complete
             sequence
          Length = 154555

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                         
Query: 184   tcctagcagttgatgccacaggtttggatatnggggccagcgagacgngncctgaatgga 243
             |||||||||||||| |||||  ||||| |||  ||||| | || ||| |   ||||||||
Sbjct: 21238 tcctagcagttgataccacatttttgggtatcagggcctgtgacacgggtggtgaatgga 21179

                                          
Query: 244   tcaacacgaacccacagcaaggagaagat 272
             || | ||||||||||||||||||||||||
Sbjct: 21178 tcgatacgaacccacagcaaggagaagat 21150
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 74/89 (83%)
 Strand = Plus / Plus

                                                                            
Query: 184      tcctagcagttgatgccacaggtttggatatnggggccagcgagacgngncctgaatgga 243
                |||||||||||||| |||||  ||||| |||  ||||| | || ||| |   ||||||||
Sbjct: 33567383 tcctagcagttgataccacatttttgggtatcagggcctgtgacacgggtggtgaatgga 33567442

                                             
Query: 244      tcaacacgaacccacagcaaggagaagat 272
                || | ||||||||||||||||||||||||
Sbjct: 33567443 tcgatacgaacccacagcaaggagaagat 33567471
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>dbj|AK069196.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003G18, full
            insert sequence
          Length = 4282

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                        
Query: 184  tcctagcagttgatgccacaggtttggatatnggggccagcgagacgngncctgaatgga 243
            |||||||||||||| |||||  ||||| |||  ||||| | || ||| |   ||||||||
Sbjct: 3498 tcctagcagttgataccacatttttgggtatcagggcctgtgacacgggtggtgaatgga 3439

                                         
Query: 244  tcaacacgaacccacagcaaggagaagat 272
            || | ||||||||||||||||||||||||
Sbjct: 3438 tcgatacgaacccacagcaaggagaagat 3410
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>dbj|AK061688.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B05, full
            insert sequence
          Length = 1582

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                        
Query: 184  tcctagcagttgatgccacaggtttggatatnggggccagcgagacgngncctgaatgga 243
            |||||||||||||| |||||  ||||| |||  ||||| | || ||| |   ||||||||
Sbjct: 1163 tcctagcagttgataccacatttttgggtatcagggcctgtgacacgggtggtgaatgga 1104

                                         
Query: 244  tcaacacgaacccacagcaaggagaagat 272
            || | ||||||||||||||||||||||||
Sbjct: 1103 tcgatacgaacccacagcaaggagaagat 1075
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>ref|XM_470040.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3607

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 72/87 (82%)
 Strand = Plus / Minus

                                                                        
Query: 186  ctagcagttgatgccacaggtttggatatnggggccagcgagacgngncctgaatggatc 245
            |||||||||||| |||||  ||||| |||  ||||| | || ||| |   ||||||||||
Sbjct: 3607 ctagcagttgataccacatttttgggtatcagggcctgtgacacgggtggtgaatggatc 3548

                                       
Query: 246  aacacgaacccacagcaaggagaagat 272
             | ||||||||||||||||||||||||
Sbjct: 3547 gatacgaacccacagcaaggagaagat 3521
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>gb|DQ020211.1| Bambusa oldhamii cellulose synthase BoCesA4a mRNA, complete cds
          Length = 3756

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 75/91 (82%)
 Strand = Plus / Minus

                                                                        
Query: 182  tttcctagcagttgatgccacaggtttggatatnggggccagcgagacgngncctgaatg 241
            |||||||||||||||||||||| |||||| |||  ||||||| ||  || |   |||| |
Sbjct: 3486 tttcctagcagttgatgccacatgtttgggtatctgggccagtgacgcgggtggtgaacg 3427

                                           
Query: 242  gatcaacacgaacccacagcaaggagaagat 272
            | ||||  |||||||||| ||||||||||||
Sbjct: 3426 ggtcaatgcgaacccacaacaaggagaagat 3396
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>gb|AY095297.1| Populus tremuloides cellulose synthase (CesA2) mRNA, complete cds
          Length = 3277

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 238  aatggatcaacacgaacccacagcaaggagaagattgaagccagga 283
            ||||||||||  || ||||| |||||||||||||| ||||||||||
Sbjct: 3067 aatggatcaatccggacccaaagcaaggagaagatggaagccagga 3022
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>gb|AF200528.1|AF200528 Zea mays cellulose synthase-4 (CesA-4) mRNA, complete cds
          Length = 3745

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 85/106 (80%)
 Strand = Plus / Minus

                                                                        
Query: 176  ttccattttcctagcagttgatgccacaggtttggatatnggggccagcgagacgngncc 235
            ||||| || ||||||||||||||||||| || ||| |||  ||||||| ||  || |   
Sbjct: 3563 ttccacttccctagcagttgatgccacacgtctgggtatccgggccagtgacgcgggtgg 3504

                                                          
Query: 236  tgaatggatcaacacgaacccacagcaaggagaagattgaagccag 281
            |||| || || |  ||||||||||||||||||||||| || |||||
Sbjct: 3503 tgaaggggtcgatgcgaacccacagcaaggagaagatggacgccag 3458
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>gb|AY108113.1| Zea mays PCO126465 mRNA sequence
          Length = 3763

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 85/106 (80%)
 Strand = Plus / Minus

                                                                        
Query: 176  ttccattttcctagcagttgatgccacaggtttggatatnggggccagcgagacgngncc 235
            ||||| || ||||||||||||||||||| || ||| |||  ||||||| ||  || |   
Sbjct: 3581 ttccacttccctagcagttgatgccacacgtctgggtatccgggccagtgacgcgggtgg 3522

                                                          
Query: 236  tgaatggatcaacacgaacccacagcaaggagaagattgaagccag 281
            |||| || || |  ||||||||||||||||||||||| || |||||
Sbjct: 3521 tgaaggggtcgatgcgaacccacagcaaggagaagatggacgccag 3476
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>gb|BT018125.1| Zea mays clone EL01N0554C08.c mRNA sequence
          Length = 1450

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 250  cgaacccacagcaaggagaagattgaagccag 281
            ||||||||||||||||||||||| || |||||
Sbjct: 1198 cgaacccacagcaaggagaagatcgacgccag 1167
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>gb|AY483151.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA3)
            mRNA, partial cds
          Length = 3362

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 72/89 (80%)
 Strand = Plus / Minus

                                                                        
Query: 184  tcctagcagttgatgccacaggtttggatatnggggccagcgagacgngncctgaatgga 243
            ||||||||||||||||||||  |||||||||  || |||| ||  || |   |||| || 
Sbjct: 3158 tcctagcagttgatgccacacatttggatatctggcccagtgactcgtgtggtgaacggg 3099

                                         
Query: 244  tcaacacgaacccacagcaaggagaagat 272
            || |  |||||||||||||||||||||||
Sbjct: 3098 tcgatgcgaacccacagcaaggagaagat 3070
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>gb|AF200533.1|AF200533 Zea mays cellulose synthase-9 (CesA-9) mRNA, complete cds
          Length = 3795

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 250  cgaacccacagcaaggagaagattgaagccag 281
            ||||||||||||||||||||||| || |||||
Sbjct: 3413 cgaacccacagcaaggagaagatcgacgccag 3382
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>gb|AY112236.1| Zea mays CL1160_1 mRNA sequence
          Length = 3728

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 250  cgaacccacagcaaggagaagattgaagccag 281
            ||||||||||||||||||||||| || |||||
Sbjct: 3413 cgaacccacagcaaggagaagatcgacgccag 3382
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>gb|DQ014507.1| Eucalyptus grandis cellulose synthase 3 (CesA3) mRNA, complete cds
          Length = 3452

 Score = 46.1 bits (23), Expect = 0.060
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 253  acccacagcaaggagaagattgaagccagga 283
            ||||||||||||||||| || ||||||||||
Sbjct: 3089 acccacagcaaggagaatatggaagccagga 3059
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>emb|CR381579.22| Zebrafish DNA sequence from clone CH211-229N1 in linkage group 15,
              complete sequence
          Length = 130841

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 8      agcttaacctcatgaaaacgg 28
              |||||||||||||||||||||
Sbjct: 120990 agcttaacctcatgaaaacgg 120970
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>gb|DQ124074.1| Coffea arabica clone MN-SSH3-C06 mRNA sequence
          Length = 241

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 236 tgaatggatcaacacgaacccacagcaaggagaagat 272
           ||||||||||||  || ||||| ||||||||||||||
Sbjct: 161 tgaatggatcaattcgcacccagagcaaggagaagat 197
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>emb|AL772225.5| Mouse DNA sequence from clone RP23-235D17 on chromosome 11 Contains the
             5' end of a novel gene and a novel gene, complete sequence
          Length = 132761

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 150   ctgttatattttctgtctcta 170
             |||||||||||||||||||||
Sbjct: 50223 ctgttatattttctgtctcta 50203
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>gb|AC006037.2| Homo sapiens BAC clone RP11-263G22 from 2, complete sequence
          Length = 108711

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 146   atcactgttatattttctgtctcta 170
             |||||||||||||||||||| ||||
Sbjct: 83707 atcactgttatattttctgtttcta 83731
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>gb|BT019277.1| Zea mays clone Contig950.F mRNA sequence
          Length = 789

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 184 tcctagcagttgatgccaca 203
           ||||||||||||||||||||
Sbjct: 192 tcctagcagttgatgccaca 211
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>gb|AY055724.2| Populus tremuloides cellulose synthase (CesA5) mRNA, complete cds
          Length = 3532

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                            
Query: 236  tgaatggatcaacacgaacccacagcaaggagaagattgaagccagga 283
            |||| |||||||| |  ||||||| |||||| ||||||||||| ||||
Sbjct: 3422 tgaagggatcaactctcacccacaacaaggaaaagattgaagcaagga 3375
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>gb|AC004605.1|HUAC004605 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-248F7, complete sequence
          Length = 259474

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 148    cactgttatattttctgtctctac 171
              |||||||||||||||| |||||||
Sbjct: 225904 cactgttatattttctatctctac 225927
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>gb|AC125409.3| Mus musculus BAC clone RP23-127O4 from 12, complete sequence
          Length = 209670

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 256   cacagcaaggagaagattga 275
             ||||||||||||||||||||
Sbjct: 30998 cacagcaaggagaagattga 30979
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>gb|AC122830.4| Mus musculus BAC clone RP23-224I23 from 8, complete sequence
          Length = 257003

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 148    cactgttatattttctgtct 167
              ||||||||||||||||||||
Sbjct: 178996 cactgttatattttctgtct 179015
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>gb|AC116323.6| Mus musculus BAC clone RP23-281F3 from 8, complete sequence
          Length = 182204

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 148    cactgttatattttctgtct 167
              ||||||||||||||||||||
Sbjct: 158652 cactgttatattttctgtct 158633
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>emb|AL354735.14| Human DNA sequence from clone RP11-738I14 on chromosome 9 Contains the
             3' end of the DDX31 gene for DEAD/H box polypeptide 31,
             the BARHL1 gene for BarH-like 1 (Drosophila) protein, two
             novel genes and three CpG islands, complete sequence
          Length = 189821

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 147   tcactgttatattttctgtctcta 170
             |||||||| |||||||||||||||
Sbjct: 18520 tcactgttctattttctgtctcta 18543
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>emb|CR382379.6| Zebrafish DNA sequence from clone DKEY-175N5 in linkage group 7, complete
              sequence
          Length = 159548

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 153    ttatattttctgtctctaca 172
              ||||||||||||||||||||
Sbjct: 123192 ttatattttctgtctctaca 123173
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>gb|AC091936.2| Homo sapiens chromosome 5 clone RP11-325C20, complete sequence
          Length = 89681

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 107  caaacataaattttctctgg 126
            ||||||||||||||||||||
Sbjct: 9698 caaacataaattttctctgg 9679
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>gb|AC008972.8| Homo sapiens chromosome 5 clone CTD-2376I4, complete sequence
          Length = 98842

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   caaacataaattttctctgg 126
             ||||||||||||||||||||
Sbjct: 71917 caaacataaattttctctgg 71936
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>gb|AC003103.2| Homo sapiens chromosome 17, clone CTC-268N12, complete sequence
          Length = 101800

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 146   atcactgttatattttctgtctct 169
             ||||||||| ||||||||||||||
Sbjct: 67394 atcactgttttattttctgtctct 67417
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>gb|AC012642.5| Homo sapiens chromosome 5 clone CTD-2287K1, complete sequence
          Length = 159956

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 107  caaacataaattttctctgg 126
            ||||||||||||||||||||
Sbjct: 5294 caaacataaattttctctgg 5313
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>gb|AC092128.3| Homo sapiens chromosome 16 clone RP11-133M24, complete sequence
          Length = 202725

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 148    cactgttatattttctgtctctac 171
              |||||||||||||||| |||||||
Sbjct: 173676 cactgttatattttctatctctac 173653
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>gb|AC138627.1| Homo sapiens chromosome 16 clone RP11-42H13, complete sequence
          Length = 170920

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 148    cactgttatattttctgtctctac 171
              |||||||||||||||| |||||||
Sbjct: 164197 cactgttatattttctatctctac 164220
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>gb|AF200529.1|AF200529 Zea mays cellulose synthase-5 (CesA-5) mRNA, complete cds
          Length = 3676

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 184  tcctagcagttgatgccaca 203
            ||||||||||||||||||||
Sbjct: 3486 tcctagcagttgatgccaca 3467
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>gb|AF200526.1|AF200526 Zea mays cellulose synthase-2 (CesA-2) mRNA, complete cds
          Length = 3725

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 253  acccacagcaaggagaagat 272
            ||||||||||||||||||||
Sbjct: 3333 acccacagcaaggagaagat 3314
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>gb|AF200525.1|AF200525 Zea mays cellulose synthase-1 (CesA-1) mRNA, complete cds
          Length = 3752

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 253  acccacagcaaggagaagat 272
            ||||||||||||||||||||
Sbjct: 3340 acccacagcaaggagaagat 3321
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>emb|AL845284.4| Zebrafish DNA sequence from clone DKEY-277C13, complete sequence
          Length = 226168

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 9      gcttaacctcatgaaaacgg 28
              ||||||||||||||||||||
Sbjct: 151311 gcttaacctcatgaaaacgg 151330
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>gb|AY110415.1| Zea mays CL1166_1 mRNA sequence
          Length = 3898

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 253  acccacagcaaggagaagat 272
            ||||||||||||||||||||
Sbjct: 3346 acccacagcaaggagaagat 3327
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>gb|AY110079.1| Zea mays CL1164_1 mRNA sequence
          Length = 3696

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 184  tcctagcagttgatgccaca 203
            ||||||||||||||||||||
Sbjct: 3486 tcctagcagttgatgccaca 3467
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>emb|AL049833.5|CNS0000D Human chromosome 14 DNA sequence BAC R-907D1 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 203266

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 146   atcactgttatattttctgtctctacaa 173
             ||||||||| || |||||||||||||||
Sbjct: 30083 atcactgttctactttctgtctctacaa 30056
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>gb|AC134604.5| Mus musculus BAC clone RP23-296I5 from 12, complete sequence
          Length = 203284

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 256    cacagcaaggagaagattga 275
              ||||||||||||||||||||
Sbjct: 178637 cacagcaaggagaagattga 178618
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>dbj|AP004509.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT16K17, TM0037a,
             complete sequence
          Length = 84322

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 253   acccacagcaaggagaagattgaagcca 280
             ||||||||||||||||| || |||||||
Sbjct: 44255 acccacagcaaggagaaaatagaagcca 44282
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>emb|AL133168.6|CNS01DU7 Human chromosome 14 DNA sequence BAC R-187K17 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 195115

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 146  atcactgttatattttctgtctctacaa 173
            ||||||||| || |||||||||||||||
Sbjct: 975  atcactgttctactttctgtctctacaa 1002
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>emb|AL132641.3|CNS01DT6 Human chromosome 14 DNA sequence BAC C-3175A2 of library CalTech-D from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 136603

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 150   ctgttatattttctgtctct 169
             ||||||||||||||||||||
Sbjct: 65525 ctgttatattttctgtctct 65506


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,179,319
Number of Sequences: 3902068
Number of extensions: 2179319
Number of successful extensions: 37140
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 37011
Number of HSP's gapped (non-prelim): 111
length of query: 283
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 261
effective length of database: 17,147,199,772
effective search space: 4475419140492
effective search space used: 4475419140492
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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