Clone Name | rbasd23n14 |
---|---|
Clone Library Name | barley_pub |
>NODD1_BRAEL (P50323) Nodulation protein D I| Length = 314 Score = 34.7 bits (78), Expect = 0.092 Identities = 22/71 (30%), Positives = 31/71 (43%) Frame = -1 Query: 213 RAFILRR*NSLRRCHXXHGNARRPHLEHWKLLLHLRENGPIDAKRKWPVIPVLFFWLGWV 34 R + NS+ G A RP+LE W LL H + + + +IP + F G + Sbjct: 183 RPLTFEKYNSMGHVTAKFGRALRPNLEEWFLLEHGLKRRIEVVVQGFSLIPPILFDTGRI 242 Query: 33 GGNPCRLXXFF 1 G P RL F Sbjct: 243 GTMPLRLARHF 253
>ATS2_HUMAN (O95450) ADAMTS-2 precursor (EC 3.4.24.14) (A disintegrin and| metalloproteinase with thrombospondin motifs 2) (ADAM-TS 2) (ADAM-TS2) (Procollagen I/II amino propeptide-processing enzyme) (Procollagen I N-proteinase) (PC I-NP) (Procollagen N-en Length = 1211 Score = 30.4 bits (67), Expect = 1.7 Identities = 20/78 (25%), Positives = 29/78 (37%), Gaps = 3/78 (3%) Frame = -2 Query: 302 WQECTSNQAWNEQQLINTIRQFLKHKRVHEGHSF*DAETRCAVAXXXMGMLEDPIWNTGS 123 W C+ Q R+ L HK VH G ++ + P+W TG Sbjct: 863 WSPCSKPCGGGSQFTKYGCRRRLDHKMVHRGFCAALSKPKAIRRACNPQECSQPVWVTGE 922 Query: 122 ---CSYICGKMDRLMRNV 78 CS CG+ +R+V Sbjct: 923 WEPCSQTCGRTGMQVRSV 940
>NODD_BRASP (P04682) Nodulation protein D| Length = 338 Score = 30.0 bits (66), Expect = 2.3 Identities = 20/71 (28%), Positives = 29/71 (40%) Frame = -1 Query: 213 RAFILRR*NSLRRCHXXHGNARRPHLEHWKLLLHLRENGPIDAKRKWPVIPVLFFWLGWV 34 R + NS+ G A RP+LE W LL H + + + +IP + + Sbjct: 183 RPLTFEKYNSMGHVTAQFGRALRPNLEEWFLLEHGLKRRIEVVVQGFSLIPPILLDTSRI 242 Query: 33 GGNPCRLXXFF 1 G P RL F Sbjct: 243 GTMPLRLARHF 253
>ATS2_BOVIN (P79331) ADAMTS-2 precursor (EC 3.4.24.14) (A disintegrin and| metalloproteinase with thrombospondin motifs 2) (ADAM-TS 2) (ADAM-TS2) (Procollagen I/II amino propeptide-processing enzyme) (Procollagen I N-proteinase) (PC I-NP) (Procollagen N-en Length = 1205 Score = 30.0 bits (66), Expect = 2.3 Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 5/80 (6%) Frame = -2 Query: 302 WQECTSNQAWNEQQLINTIRQFLKHKRVHEGHSF*DAETRCAVAXXXMGMLE--DPIWNT 129 W C+ Q R+ L HK VH G F D+ ++ E P+W T Sbjct: 857 WSPCSKPCGGGSQFTKYGCRRRLDHKMVHRG--FCDSVSKPKAIRRTCNPQECSQPVWVT 914 Query: 128 GS---CSYICGKMDRLMRNV 78 G CS CG+ +R+V Sbjct: 915 GEWEPCSRSCGRTGMQVRSV 934
>NODD2_RHITR (P32008) Nodulation protein D 2| Length = 314 Score = 29.6 bits (65), Expect = 2.9 Identities = 20/69 (28%), Positives = 28/69 (40%) Frame = -1 Query: 207 FILRR*NSLRRCHXXHGNARRPHLEHWKLLLHLRENGPIDAKRKWPVIPVLFFWLGWVGG 28 F R S+ GN RRP +E W LL H + + + +IP + +G Sbjct: 184 FTFERYMSMGHVAVKFGNTRRPTIEEWYLLEHGLKRRIEVVVQGFSMIPPMLSGTERIGT 243 Query: 27 NPCRLXXFF 1 P RL F Sbjct: 244 MPLRLAQHF 252
>CP51_CANGA (P50859) Cytochrome P450 51 (EC 1.14.13.70) (CYPLI) (P450-LIA1)| (Sterol 14-alpha-demethylase) (Lanosterol 14-alpha demethylase) (P450-14DM) Length = 533 Score = 28.9 bits (63), Expect = 5.0 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = -1 Query: 129 WKLLLHLRENGPIDAKRKWPVIPVLFFWLGWVG 31 W+LL LR++ P P++F+W+ WVG Sbjct: 46 WQLLYSLRKDRP----------PLVFYWIPWVG 68
>CP51_YEAST (P10614) Cytochrome P450 51 (EC 1.14.13.70) (CYPLI) (P450-LIA1)| (Sterol 14-alpha demethylase) (Lanosterol 14-alpha demethylase) (P450-14DM) Length = 530 Score = 28.9 bits (63), Expect = 5.0 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = -1 Query: 129 WKLLLHLRENGPIDAKRKWPVIPVLFFWLGWVG 31 W+LL LR++ P P++F+W+ WVG Sbjct: 45 WQLLYSLRKDRP----------PLVFYWIPWVG 67
>TOP3_YEAST (P13099) DNA topoisomerase 3 (EC 5.99.1.2) (DNA topoisomerase III)| Length = 656 Score = 28.5 bits (62), Expect = 6.6 Identities = 10/23 (43%), Positives = 13/23 (56%) Frame = +2 Query: 146 LRAFPWXXWQRRSEFQRLRMNAL 214 L +PW W+ + RL MNAL Sbjct: 490 LDVYPWARWETTKQLPRLEMNAL 512
>YCR3_YEAST (P25351) Hypothetical transport protein YCR023C| Length = 611 Score = 28.1 bits (61), Expect = 8.6 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = -2 Query: 398 KLEGQFEYQAFVSVSQKPDLKKILRNILSQICWQECTS 285 +L GQ A+ S SQ DL+ R+ LS + Q CT+ Sbjct: 574 ELHGQGSEDAYNSQSQSSDLRMAHRSSLSSLSNQRCTT 611
>NOD11_BRAJA (Q45264) Nodulation protein D I| Length = 314 Score = 28.1 bits (61), Expect = 8.6 Identities = 18/53 (33%), Positives = 23/53 (43%) Frame = -1 Query: 159 GNARRPHLEHWKLLLHLRENGPIDAKRKWPVIPVLFFWLGWVGGNPCRLXXFF 1 G A RP+LE W LL H + + +IP L +G P RL F Sbjct: 201 GRALRPNLEEWFLLEHGLRRRIEVVVQGFSLIPPLLLDTSRIGTMPLRLARHF 253 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,180,036 Number of Sequences: 219361 Number of extensions: 1188571 Number of successful extensions: 3113 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 3053 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3113 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2228238148 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)