ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd24c12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
2dbj|AP004669.3| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
3dbj|AK103484.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 2e-15
4dbj|AP003566.3| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
5ref|XM_463503.1| Oryza sativa (japonica cultivar-group), predic... 90 9e-15
6gb|AY107926.1| Zea mays PCO114417 mRNA sequence 46 0.12
7emb|AL669931.9| Mouse DNA sequence from clone RP23-31D18 on chro... 44 0.47
8emb|AL353093.18| Human DNA sequence from clone RP11-224P11 on ch... 42 1.9
9gb|AC091713.4| Papio anubis clone RP41-217F22, complete sequence 42 1.9
10gb|AC097004.3| Papio anubis clone RP41-290N16, complete sequence 42 1.9
11gb|AC099009.2| Drosophila melanogaster clone BACR17M11, complete... 40 7.4
12gb|AC011250.6| Drosophila melanogaster clone BACR21B19, complete... 40 7.4
13gb|AC010839.7| Drosophila melanogaster clone BACN19N21, complete... 40 7.4
14ref|XM_866254.1| PREDICTED: Bos taurus a disintegrin and metallo... 40 7.4
15gb|AC134336.2| Mus musculus BAC clone RP23-134A10 from chromosom... 40 7.4
16gb|AC161257.2| Mus musculus BAC clone RP24-91A16 from chromosome... 40 7.4
17gb|AF101319.2| Caenorhabditis elegans cosmid K08D9, complete seq... 40 7.4
18gb|AC131663.3| Mus musculus BAC clone RP23-258B18 from 6, comple... 40 7.4
19gb|AC117550.8| Mus musculus chromosome 1, clone RP24-571N3, comp... 40 7.4
20emb|AL161671.25| Human DNA sequence from clone RP11-64I24 on chr... 40 7.4
21emb|AL096699.11|HS1145L23 Human DNA sequence from clone RP5-1145... 40 7.4
22emb|AL031388.1|HS737M10 Human DNA sequence from clone RP4-737M10... 40 7.4
23gb|AC009773.27| Homo sapiens 12 BAC RP11-82C23 (Roswell Park Can... 40 7.4
24gb|AC102802.2| Homo sapiens chromosome 8, clone RP11-237C9, comp... 40 7.4
25tpg|BK002945.1| TPA: TPA_inf: Drosophila melanogaster HDC16673 (... 40 7.4
26gb|AC115621.3| Homo sapiens BAC clone RP11-315D13 from 4, comple... 40 7.4
27gb|AC093726.3| Homo sapiens BAC clone RP11-5C23 from 7, complete... 40 7.4
28gb|AC011613.4|AC011613 Drosophila melanogaster, chromosome 4, re... 40 7.4
29gb|AC151713.4| Mus musculus BAC clone RP24-100K9 from chromosome... 40 7.4
30gb|AC092116.3| Homo sapiens chromosome 16 clone CTD-2133M23, com... 40 7.4
31gb|AE003832.4| Drosophila melanogaster chromosome 2R, section 18... 40 7.4
32gb|AE003844.5| Drosophila melanogaster chromosome 4, section 2 o... 40 7.4
33gb|AC105327.13| Mus musculus chromosome 8, clone RP24-323I19, co... 40 7.4
34gb|AC004468.1|AC004468 Homo sapiens Xp21 PAC RPCI1-37A12 contain... 40 7.4
35gb|AC005894.1|AC005894 Drosophila melanogaster, chromosome 2R, r... 40 7.4
36gb|AF086807.1|AF086807 Bos taurus fertilin alpha (ADAM 1) mRNA, ... 40 7.4
37emb|CT476827.2| Pan troglodytes chromosome X BAC RP43-033L16, co... 40 7.4

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 108/128 (84%), Gaps = 3/128 (2%)
 Strand = Plus / Minus

                                                                            
Query: 292      tctagacgaagtagtcttggcgcacgacggtgatgaaatcgcagggaagtgagtcttcct 351
                ||||||| ||||||||||| |||| ||| || || |  || |||||||||||||| ||||
Sbjct: 37883195 tctagacaaagtagtcttgacgcatgacagttataatgtcacagggaagtgagtcgtcct 37883136

                                                                            
Query: 352      ctttttgcttccctacatcgccgccgtttccttgtatgtgccagtatatctttggaggca 411
                ||||||| || |||| ||| |||   |||||||| ||||||||||||||||||||||| |
Sbjct: 37883135 ctttttgtttacctatatccccg---tttccttggatgtgccagtatatctttggaggaa 37883079

                        
Query: 412      ggggtgca 419
                | ||||||
Sbjct: 37883078 gaggtgca 37883071



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 78/93 (83%)
 Strand = Plus / Minus

                                                                            
Query: 451      tttgatcaagttctctagtggaatggagcacaataataccggcaagaactgtgagaaacc 510
                |||||||| |||||||||| || || ||||||| | |||| ||||||||||| ||||| |
Sbjct: 37882963 tttgatcaggttctctagtagagtgtagcacaagagtaccagcaagaactgtcagaaatc 37882904

                                                 
Query: 511      cacaagtctcggaggcaataatgcttgcgctct 543
                | ||| ||||||| |||||  ||||||| ||||
Sbjct: 37882903 cgcaaatctcggatgcaattttgcttgcactct 37882871



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>dbj|AP004669.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0491F11
          Length = 152274

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 108/128 (84%), Gaps = 3/128 (2%)
 Strand = Plus / Minus

                                                                          
Query: 292    tctagacgaagtagtcttggcgcacgacggtgatgaaatcgcagggaagtgagtcttcct 351
              ||||||| ||||||||||| |||| ||| || || |  || |||||||||||||| ||||
Sbjct: 104551 tctagacaaagtagtcttgacgcatgacagttataatgtcacagggaagtgagtcgtcct 104492

                                                                          
Query: 352    ctttttgcttccctacatcgccgccgtttccttgtatgtgccagtatatctttggaggca 411
              ||||||| || |||| ||| |||   |||||||| ||||||||||||||||||||||| |
Sbjct: 104491 ctttttgtttacctatatccccg---tttccttggatgtgccagtatatctttggaggaa 104435

                      
Query: 412    ggggtgca 419
              | ||||||
Sbjct: 104434 gaggtgca 104427



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 78/93 (83%)
 Strand = Plus / Minus

                                                                          
Query: 451    tttgatcaagttctctagtggaatggagcacaataataccggcaagaactgtgagaaacc 510
              |||||||| |||||||||| || || ||||||| | |||| ||||||||||| ||||| |
Sbjct: 104319 tttgatcaggttctctagtagagtgtagcacaagagtaccagcaagaactgtcagaaatc 104260

                                               
Query: 511    cacaagtctcggaggcaataatgcttgcgctct 543
              | ||| ||||||| |||||  ||||||| ||||
Sbjct: 104259 cgcaaatctcggatgcaattttgcttgcactct 104227



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>dbj|AK103484.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033130L04, full
            insert sequence
          Length = 1683

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 108/128 (84%), Gaps = 3/128 (2%)
 Strand = Plus / Minus

                                                                        
Query: 292  tctagacgaagtagtcttggcgcacgacggtgatgaaatcgcagggaagtgagtcttcct 351
            ||||||| ||||||||||| |||| ||| || || |  || |||||||||||||| ||||
Sbjct: 1265 tctagacaaagtagtcttgacgcatgacagttataatgtcacagggaagtgagtcgtcct 1206

                                                                        
Query: 352  ctttttgcttccctacatcgccgccgtttccttgtatgtgccagtatatctttggaggca 411
            ||||||| || |||| ||| |||   |||||||| ||||||||||||||||||||||| |
Sbjct: 1205 ctttttgtttacctatatccccg---tttccttggatgtgccagtatatctttggaggaa 1149

                    
Query: 412  ggggtgca 419
            | ||||||
Sbjct: 1148 gaggtgca 1141



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 100/121 (82%)
 Strand = Plus / Minus

                                                                        
Query: 423  agagatgcataaaggtctggagacagattttgatcaagttctctagtggaatggagcaca 482
            |||| |||||| |||||||  || ||| |||||||| |||||||||| || || ||||||
Sbjct: 1149 agaggtgcatacaggtctgccgaaagagtttgatcaggttctctagtagagtgtagcaca 1090

                                                                        
Query: 483  ataataccggcaagaactgtgagaaacccacaagtctcggaggcaataatgcttgcgctc 542
            | | |||| ||||||||||| ||||| || ||| ||||||| |||||  ||||||| |||
Sbjct: 1089 agagtaccagcaagaactgtcagaaatccgcaaatctcggatgcaattttgcttgcactc 1030

             
Query: 543  t 543
            |
Sbjct: 1029 t 1029



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>dbj|AP003566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBb0008G24
          Length = 152736

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 108/128 (84%), Gaps = 3/128 (2%)
 Strand = Plus / Minus

                                                                          
Query: 292    tctagacgaagtagtcttggcgcacgacggtgatgaaatcgcagggaagtgagtcttcct 351
              ||||||| ||||||||||| |||| ||| || || |  || |||||||||||||| ||||
Sbjct: 142443 tctagacaaagtagtcttgacgcatgacagttataatgtcacagggaagtgagtcgtcct 142384

                                                                          
Query: 352    ctttttgcttccctacatcgccgccgtttccttgtatgtgccagtatatctttggaggca 411
              ||||||| || |||| ||| |||   |||||||| ||||||||||||||||||||||| |
Sbjct: 142383 ctttttgtttacctatatccccg---tttccttggatgtgccagtatatctttggaggaa 142327

                      
Query: 412    ggggtgca 419
              | ||||||
Sbjct: 142326 gaggtgca 142319



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 78/93 (83%)
 Strand = Plus / Minus

                                                                          
Query: 451    tttgatcaagttctctagtggaatggagcacaataataccggcaagaactgtgagaaacc 510
              |||||||| |||||||||| || || ||||||| | |||| ||||||||||| ||||| |
Sbjct: 142211 tttgatcaggttctctagtagagtgtagcacaagagtaccagcaagaactgtcagaaatc 142152

                                               
Query: 511    cacaagtctcggaggcaataatgcttgcgctct 543
              | ||| ||||||| |||||  ||||||| ||||
Sbjct: 142151 cgcaaatctcggatgcaattttgcttgcactct 142119



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>ref|XM_463503.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 969

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 107/127 (84%), Gaps = 3/127 (2%)
 Strand = Plus / Minus

                                                                       
Query: 293 ctagacgaagtagtcttggcgcacgacggtgatgaaatcgcagggaagtgagtcttcctc 352
           |||||| ||||||||||| |||| ||| || || |  || |||||||||||||| |||||
Sbjct: 969 ctagacaaagtagtcttgacgcatgacagttataatgtcacagggaagtgagtcgtcctc 910

                                                                       
Query: 353 tttttgcttccctacatcgccgccgtttccttgtatgtgccagtatatctttggaggcag 412
           |||||| || |||| ||| |||   |||||||| ||||||||||||||||||||||| ||
Sbjct: 909 tttttgtttacctatatccccg---tttccttggatgtgccagtatatctttggaggaag 853

                  
Query: 413 gggtgca 419
            ||||||
Sbjct: 852 aggtgca 846



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 100/121 (82%)
 Strand = Plus / Minus

                                                                       
Query: 423 agagatgcataaaggtctggagacagattttgatcaagttctctagtggaatggagcaca 482
           |||| |||||| |||||||  || ||| |||||||| |||||||||| || || ||||||
Sbjct: 854 agaggtgcatacaggtctgccgaaagagtttgatcaggttctctagtagagtgtagcaca 795

                                                                       
Query: 483 ataataccggcaagaactgtgagaaacccacaagtctcggaggcaataatgcttgcgctc 542
           | | |||| ||||||||||| ||||| || ||| ||||||| |||||  ||||||| |||
Sbjct: 794 agagtaccagcaagaactgtcagaaatccgcaaatctcggatgcaattttgcttgcactc 735

            
Query: 543 t 543
           |
Sbjct: 734 t 734



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>gb|AY107926.1| Zea mays PCO114417 mRNA sequence
          Length = 657

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 292 tctagacgaagtagtcttggcgcacgacggtgatgaaat 330
           ||||||| ||||||||||| ||||| || ||||||||||
Sbjct: 172 tctagacaaagtagtcttgtcgcaccacagtgatgaaat 134



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>emb|AL669931.9| Mouse DNA sequence from clone RP23-31D18 on chromosome 11 Contains the
              Stc2 gene for stanniocalcin 2 and three CpG islands,
              complete sequence
          Length = 252980

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 500    tgtgagaaacccacaagtctcggagg 525
              ||||||||||||||||||||| ||||
Sbjct: 212717 tgtgagaaacccacaagtctctgagg 212692



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>emb|AL353093.18| Human DNA sequence from clone RP11-224P11 on chromosome 10 Contains a
             single-stranded DNA binding protein (SSBP1)(SSBP)
             pseudogene, complete sequence
          Length = 156008

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 407   aggcaggggtgcagtgagagatgca 431
             |||||||| ||||||||||||||||
Sbjct: 29649 aggcagggctgcagtgagagatgca 29673



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>gb|AC091713.4| Papio anubis clone RP41-217F22, complete sequence
          Length = 215961

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 150    ctgcaaaattttaacattttt 170
              |||||||||||||||||||||
Sbjct: 167490 ctgcaaaattttaacattttt 167470



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>gb|AC097004.3| Papio anubis clone RP41-290N16, complete sequence
          Length = 166987

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 150   ctgcaaaattttaacattttt 170
             |||||||||||||||||||||
Sbjct: 34360 ctgcaaaattttaacattttt 34340



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>gb|AC099009.2| Drosophila melanogaster clone BACR17M11, complete sequence
          Length = 188872

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 160   ttaacatttttcaggccaggatgg 183
             |||||||||||| |||||||||||
Sbjct: 51643 ttaacatttttctggccaggatgg 51666



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>gb|AC011250.6| Drosophila melanogaster clone BACR21B19, complete sequence
          Length = 161692

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 154    aaaattttaacatttttcag 173
              ||||||||||||||||||||
Sbjct: 121392 aaaattttaacatttttcag 121411



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>gb|AC010839.7| Drosophila melanogaster clone BACN19N21, complete sequence
          Length = 92302

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 154   aaaattttaacatttttcag 173
             ||||||||||||||||||||
Sbjct: 22143 aaaattttaacatttttcag 22162



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>ref|XM_866254.1| PREDICTED: Bos taurus a disintegrin and metalloproteinase domain 1
           (ADAM1), mRNA
          Length = 2790

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 234 cacatgaaggtcttgaggctggcc 257
           |||||||||| |||||||||||||
Sbjct: 109 cacatgaagggcttgaggctggcc 132



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>gb|AC134336.2| Mus musculus BAC clone RP23-134A10 from chromosome 6, complete sequence
          Length = 204120

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 342   gagtcttcctctttttgctt 361
             ||||||||||||||||||||
Sbjct: 78420 gagtcttcctctttttgctt 78401



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>gb|AC161257.2| Mus musculus BAC clone RP24-91A16 from chromosome 9, complete sequence
          Length = 245088

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 423    agagatgcataaaggtctgg 442
              ||||||||||||||||||||
Sbjct: 170598 agagatgcataaaggtctgg 170579



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>gb|AF101319.2| Caenorhabditis elegans cosmid K08D9, complete sequence
          Length = 39573

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 153  caaaattttaacatttttca 172
            ||||||||||||||||||||
Sbjct: 3290 caaaattttaacatttttca 3271



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>gb|AC131663.3| Mus musculus BAC clone RP23-258B18 from 6, complete sequence
          Length = 191685

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 342   gagtcttcctctttttgctt 361
             ||||||||||||||||||||
Sbjct: 27375 gagtcttcctctttttgctt 27394



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>gb|AC117550.8| Mus musculus chromosome 1, clone RP24-571N3, complete sequence
          Length = 156349

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 340   gtgagtcttcctctttttgc 359
             ||||||||||||||||||||
Sbjct: 92440 gtgagtcttcctctttttgc 92459



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>emb|AL161671.25| Human DNA sequence from clone RP11-64I24 on chromosome 1 Contains a
             barrier to autointegration factor 1 (BANF1) pseudogene,
             part of the gene for expressed in hematopoietic cells
             (heart, liver) (HLL) and a chromosome 6 open reading frame
             66 (C6orf66) pseudogene, complete sequence
          Length = 102349

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 424   gagatgcataaaggtctgga 443
             ||||||||||||||||||||
Sbjct: 24644 gagatgcataaaggtctgga 24625



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>emb|AL096699.11|HS1145L23 Human DNA sequence from clone RP5-1145L23 on chromosome Xp21.1-21.3
           Contains part of the DMD gene for dystrophin (muscular
           dystrophy, Duchenne and Becker types) and a novel gene,
           complete sequence
          Length = 203006

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 405 ggaggcaggggtgcagtgag 424
           ||||||||||||||||||||
Sbjct: 831 ggaggcaggggtgcagtgag 850



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>emb|AL031388.1|HS737M10 Human DNA sequence from clone RP4-737M10 on chromosome Xq23 Contains
            the 5' end of the TRPC5 gene for transient receptor
            potential cation channel subfamily C member 5, complete
            sequence
          Length = 107172

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 493  caagaactgtgagaaacccacaag 516
            |||| |||||||||||||||||||
Sbjct: 1629 caaggactgtgagaaacccacaag 1606



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>gb|AC009773.27| Homo sapiens 12 BAC RP11-82C23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 130027

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 351   tctttttgcttccctacatc 370
             ||||||||||||||||||||
Sbjct: 69365 tctttttgcttccctacatc 69346



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>gb|AC102802.2| Homo sapiens chromosome 8, clone RP11-237C9, complete sequence
          Length = 156578

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 405   ggaggcaggggtgcagtgag 424
             ||||||||||||||||||||
Sbjct: 78906 ggaggcaggggtgcagtgag 78925



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>tpg|BK002945.1| TPA: TPA_inf: Drosophila melanogaster HDC16673 (HDC16673) gene,
           complete cds
          Length = 8161

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 154 aaaattttaacatttttcag 173
           ||||||||||||||||||||
Sbjct: 62  aaaattttaacatttttcag 81



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>gb|AC115621.3| Homo sapiens BAC clone RP11-315D13 from 4, complete sequence
          Length = 148726

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 405   ggaggcaggggtgcagtgag 424
             ||||||||||||||||||||
Sbjct: 19886 ggaggcaggggtgcagtgag 19867



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>gb|AC093726.3| Homo sapiens BAC clone RP11-5C23 from 7, complete sequence
          Length = 159041

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 405    ggaggcaggggtgcagtgag 424
              ||||||||||||||||||||
Sbjct: 107736 ggaggcaggggtgcagtgag 107717



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>gb|AC011613.4|AC011613 Drosophila melanogaster, chromosome 4, region 101F-102F, BAC clone
             BACN04K08, complete sequence
          Length = 67359

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 154   aaaattttaacatttttcag 173
             ||||||||||||||||||||
Sbjct: 10393 aaaattttaacatttttcag 10412



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>gb|AC151713.4| Mus musculus BAC clone RP24-100K9 from chromosome 8, complete sequence
          Length = 199295

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 177   aggatggccttgagggcgtc 196
             ||||||||||||||||||||
Sbjct: 81120 aggatggccttgagggcgtc 81101



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>gb|AC092116.3| Homo sapiens chromosome 16 clone CTD-2133M23, complete sequence
          Length = 61373

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 405   ggaggcaggggtgcagtgag 424
             ||||||||||||||||||||
Sbjct: 58505 ggaggcaggggtgcagtgag 58524



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>gb|AE003832.4| Drosophila melanogaster chromosome 2R, section 18 of 73 of the complete
             sequence
          Length = 242171

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 160   ttaacatttttcaggccaggatgg 183
             |||||||||||| |||||||||||
Sbjct: 50400 ttaacatttttctggccaggatgg 50423



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>gb|AE003844.5| Drosophila melanogaster chromosome 4, section 2 of 5 of the complete
             sequence
          Length = 315846

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 154   aaaattttaacatttttcag 173
             ||||||||||||||||||||
Sbjct: 13152 aaaattttaacatttttcag 13171



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>gb|AC105327.13| Mus musculus chromosome 8, clone RP24-323I19, complete sequence
          Length = 215363

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 177   aggatggccttgagggcgtc 196
             ||||||||||||||||||||
Sbjct: 24719 aggatggccttgagggcgtc 24738



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>gb|AC004468.1|AC004468 Homo sapiens Xp21 PAC RPCI1-37A12 containing exons 10 to 16 of the
             Duchenne Muscular Dystrophy gene, complete sequence
          Length = 127757

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 405   ggaggcaggggtgcagtgag 424
             ||||||||||||||||||||
Sbjct: 12394 ggaggcaggggtgcagtgag 12375



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>gb|AC005894.1|AC005894 Drosophila melanogaster, chromosome 2R, region 46A1-46B2, P1 clones
             DS00050, DS00191, and DS05369, complete sequence
          Length = 196337

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 160   ttaacatttttcaggccaggatgg 183
             |||||||||||| |||||||||||
Sbjct: 47066 ttaacatttttctggccaggatgg 47089



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>gb|AF086807.1|AF086807 Bos taurus fertilin alpha (ADAM 1) mRNA, partial cds
          Length = 2439

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 234 cacatgaaggtcttgaggctggcc 257
           |||||||||| |||||||||||||
Sbjct: 94  cacatgaagggcttgaggctggcc 117



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>emb|CT476827.2| Pan troglodytes chromosome X BAC RP43-033L16, complete sequence
          Length = 165984

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 405   ggaggcaggggtgcagtgag 424
             ||||||||||||||||||||
Sbjct: 33729 ggaggcaggggtgcagtgag 33748


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,424,091
Number of Sequences: 3902068
Number of extensions: 4424091
Number of successful extensions: 98127
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98029
Number of HSP's gapped (non-prelim): 93
length of query: 543
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 520
effective length of database: 17,143,297,704
effective search space: 8914514806080
effective search space used: 8914514806080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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