Clone Name | rbasd23n11 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | ABIL2_ORYSA (Q5JKN2) Putative protein ABIL2 (Abl interactor-like... | 136 | 7e-32 | 2 | ABIL3_ORYSA (Q5NB83) Probable protein ABIL3 (Abl interactor-like... | 32 | 2.3 | 3 | ZBED3_HUMAN (Q96IU2) Zinc finger BED domain-containing protein 3 | 32 | 2.3 | 4 | FILA_HUMAN (P20930) Filaggrin | 30 | 6.6 | 5 | ABIL2_ARATH (Q9M3A3) Protein ABIL2 (Abl interactor-like protein ... | 30 | 8.6 | 6 | TBCD5_MOUSE (Q80XQ2) TBC1 domain family member 5 | 30 | 8.6 |
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>ABIL2_ORYSA (Q5JKN2) Putative protein ABIL2 (Abl interactor-like protein 2)| Length = 323 Score = 136 bits (342), Expect = 7e-32 Identities = 89/184 (48%), Positives = 100/184 (54%), Gaps = 1/184 (0%) Frame = -1 Query: 670 PKYHKRYILPAGGDSIPNAMPNFSAMNKVKNRATTQMHQAFSAASAAQTKNKDKQASFRK 491 PKYHKRYILPAG S+PNA+PNFS M K KNRA QM Q FSAA+A+Q K K+KQ SF K Sbjct: 141 PKYHKRYILPAGDGSMPNAVPNFSEMRKAKNRA-AQMQQVFSAAAASQAKAKEKQPSFSK 199 Query: 490 LXXXXXXXXXXXXXXXXXXXXRFVPPSDTAIPIKR-DKRSDSPIYSTTPLTRXXXXXXXX 314 L PPS+ IP KR DKRS+SPI TTPLTR Sbjct: 200 LRSIARAPSQRARSSSPAQR----PPSENTIPTKRADKRSESPIPRTTPLTRSGSLPQKP 255 Query: 313 XXXXXXSVRVQMQTTSDPKRLVPLRSYADRYNDDSKESEQTXXXXXXXXXXXXXXXXXXK 134 SVRVQM TS+ K+L +RS ADR +D KE EQT K Sbjct: 256 SLLKTSSVRVQMH-TSEHKKLASVRSQADR--NDDKEGEQTPKKGKKFLKSLLSRRKSRK 312 Query: 133 EEPL 122 EEPL Sbjct: 313 EEPL 316
>ABIL3_ORYSA (Q5NB83) Probable protein ABIL3 (Abl interactor-like protein 3)| Length = 317 Score = 31.6 bits (70), Expect = 2.3 Identities = 33/138 (23%), Positives = 54/138 (39%), Gaps = 2/138 (1%) Frame = -1 Query: 670 PKYHKRYILPAGGDSIPNAM-PNFSAMNKVKNRATTQMHQAFSAASAAQTKNKDKQASFR 494 PKYH+RYILP G D + +A+ P + + +MH++ S ++ ++ + A R Sbjct: 143 PKYHRRYILP-GTDIVESAIHPVSEPPRYSRQHMSRKMHKSQSISTPVGRQSTMRSA--R 199 Query: 493 KLXXXXXXXXXXXXXXXXXXXXRFVPPSDTAIPIK-RDKRSDSPIYSTTPLTRXXXXXXX 317 R PS I + ++ R+ SPI ++ PL R Sbjct: 200 SPSPSARGTHHRSRSLSPSRKARAKSPSPQIISTQTKETRAGSPIPNSNPLARSATVARR 259 Query: 316 XXXXXXXSVRVQMQTTSD 263 + MQ SD Sbjct: 260 PPVHPKHFRQTSMQLHSD 277
>ZBED3_HUMAN (Q96IU2) Zinc finger BED domain-containing protein 3| Length = 234 Score = 31.6 bits (70), Expect = 2.3 Identities = 12/42 (28%), Positives = 25/42 (59%) Frame = -3 Query: 596 DEQGQEQGYHTDASGLQRSIRSSNKKQRQASFIPQAPVDCPC 471 ++ G+ G+H S L R +RS+++++ ++S +P PC Sbjct: 74 EQVGRGPGFHAGTSALWRHLRSAHRRELESSGAGSSPPAAPC 115
>FILA_HUMAN (P20930) Filaggrin| Length = 4061 Score = 30.0 bits (66), Expect = 6.6 Identities = 25/93 (26%), Positives = 33/93 (35%), Gaps = 1/93 (1%) Frame = -2 Query: 591 TRSRTGLPHRCIRPSAQHPQLKQKTKTSKLHSASSGRLP-VHLLRVRDHPLQHSIRASCH 415 +R+ G R ++HP Q+ + S HSA S R H H S H Sbjct: 1291 SRNHHGSSREQSRDGSRHPGFHQEDRASHGHSADSSRQSGTH----HTESSSHGQAVSSH 1346 Query: 414 LLILQYPSKEIKDRIHQFIRRLRSQGLGHSQRS 316 P + R Q R G+GH Q S Sbjct: 1347 EQARSSPGERHGSRHQQSADSSRHSGIGHRQAS 1379
>ABIL2_ARATH (Q9M3A3) Protein ABIL2 (Abl interactor-like protein 2) (AtABIL2)| Length = 312 Score = 29.6 bits (65), Expect = 8.6 Identities = 11/12 (91%), Positives = 12/12 (100%) Frame = -1 Query: 670 PKYHKRYILPAG 635 PK+HKRYILPAG Sbjct: 128 PKFHKRYILPAG 139
>TBCD5_MOUSE (Q80XQ2) TBC1 domain family member 5| Length = 815 Score = 29.6 bits (65), Expect = 8.6 Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 1/76 (1%) Frame = -2 Query: 480 LPVHLLRVRDHPLQHSIRASCHLLILQYPSKEIKDRIHQFIRRLRSQ-GLGHSQRSHPCS 304 + +HL+ ++D LQ ++ +L+ K+IKD + +R +SQ G +++ Sbjct: 637 MDMHLVNIQDVVLQENLEKEDQILVSLAGLKQIKDILKGSLRFNQSQLEAGENEQITIAD 696 Query: 303 RHQVSGSRCRQLQIPR 256 H S + + Q+PR Sbjct: 697 DHYCSSGQDQGSQVPR 712 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 83,202,663 Number of Sequences: 219361 Number of extensions: 1464993 Number of successful extensions: 4264 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 4131 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4261 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6484657212 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)