ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd23n11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ABIL2_ORYSA (Q5JKN2) Putative protein ABIL2 (Abl interactor-like... 136 7e-32
2ABIL3_ORYSA (Q5NB83) Probable protein ABIL3 (Abl interactor-like... 32 2.3
3ZBED3_HUMAN (Q96IU2) Zinc finger BED domain-containing protein 3 32 2.3
4FILA_HUMAN (P20930) Filaggrin 30 6.6
5ABIL2_ARATH (Q9M3A3) Protein ABIL2 (Abl interactor-like protein ... 30 8.6
6TBCD5_MOUSE (Q80XQ2) TBC1 domain family member 5 30 8.6

>ABIL2_ORYSA (Q5JKN2) Putative protein ABIL2 (Abl interactor-like protein 2)|
          Length = 323

 Score =  136 bits (342), Expect = 7e-32
 Identities = 89/184 (48%), Positives = 100/184 (54%), Gaps = 1/184 (0%)
 Frame = -1

Query: 670 PKYHKRYILPAGGDSIPNAMPNFSAMNKVKNRATTQMHQAFSAASAAQTKNKDKQASFRK 491
           PKYHKRYILPAG  S+PNA+PNFS M K KNRA  QM Q FSAA+A+Q K K+KQ SF K
Sbjct: 141 PKYHKRYILPAGDGSMPNAVPNFSEMRKAKNRA-AQMQQVFSAAAASQAKAKEKQPSFSK 199

Query: 490 LXXXXXXXXXXXXXXXXXXXXRFVPPSDTAIPIKR-DKRSDSPIYSTTPLTRXXXXXXXX 314
           L                       PPS+  IP KR DKRS+SPI  TTPLTR        
Sbjct: 200 LRSIARAPSQRARSSSPAQR----PPSENTIPTKRADKRSESPIPRTTPLTRSGSLPQKP 255

Query: 313 XXXXXXSVRVQMQTTSDPKRLVPLRSYADRYNDDSKESEQTXXXXXXXXXXXXXXXXXXK 134
                 SVRVQM  TS+ K+L  +RS ADR  +D KE EQT                  K
Sbjct: 256 SLLKTSSVRVQMH-TSEHKKLASVRSQADR--NDDKEGEQTPKKGKKFLKSLLSRRKSRK 312

Query: 133 EEPL 122
           EEPL
Sbjct: 313 EEPL 316



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>ABIL3_ORYSA (Q5NB83) Probable protein ABIL3 (Abl interactor-like protein 3)|
          Length = 317

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 33/138 (23%), Positives = 54/138 (39%), Gaps = 2/138 (1%)
 Frame = -1

Query: 670 PKYHKRYILPAGGDSIPNAM-PNFSAMNKVKNRATTQMHQAFSAASAAQTKNKDKQASFR 494
           PKYH+RYILP G D + +A+ P        +   + +MH++ S ++    ++  + A  R
Sbjct: 143 PKYHRRYILP-GTDIVESAIHPVSEPPRYSRQHMSRKMHKSQSISTPVGRQSTMRSA--R 199

Query: 493 KLXXXXXXXXXXXXXXXXXXXXRFVPPSDTAIPIK-RDKRSDSPIYSTTPLTRXXXXXXX 317
                                 R   PS   I  + ++ R+ SPI ++ PL R       
Sbjct: 200 SPSPSARGTHHRSRSLSPSRKARAKSPSPQIISTQTKETRAGSPIPNSNPLARSATVARR 259

Query: 316 XXXXXXXSVRVQMQTTSD 263
                    +  MQ  SD
Sbjct: 260 PPVHPKHFRQTSMQLHSD 277



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>ZBED3_HUMAN (Q96IU2) Zinc finger BED domain-containing protein 3|
          Length = 234

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 12/42 (28%), Positives = 25/42 (59%)
 Frame = -3

Query: 596 DEQGQEQGYHTDASGLQRSIRSSNKKQRQASFIPQAPVDCPC 471
           ++ G+  G+H   S L R +RS+++++ ++S    +P   PC
Sbjct: 74  EQVGRGPGFHAGTSALWRHLRSAHRRELESSGAGSSPPAAPC 115



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>FILA_HUMAN (P20930) Filaggrin|
          Length = 4061

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 25/93 (26%), Positives = 33/93 (35%), Gaps = 1/93 (1%)
 Frame = -2

Query: 591  TRSRTGLPHRCIRPSAQHPQLKQKTKTSKLHSASSGRLP-VHLLRVRDHPLQHSIRASCH 415
            +R+  G      R  ++HP   Q+ + S  HSA S R    H          H    S H
Sbjct: 1291 SRNHHGSSREQSRDGSRHPGFHQEDRASHGHSADSSRQSGTH----HTESSSHGQAVSSH 1346

Query: 414  LLILQYPSKEIKDRIHQFIRRLRSQGLGHSQRS 316
                  P +    R  Q     R  G+GH Q S
Sbjct: 1347 EQARSSPGERHGSRHQQSADSSRHSGIGHRQAS 1379



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>ABIL2_ARATH (Q9M3A3) Protein ABIL2 (Abl interactor-like protein 2) (AtABIL2)|
          Length = 312

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = -1

Query: 670 PKYHKRYILPAG 635
           PK+HKRYILPAG
Sbjct: 128 PKFHKRYILPAG 139



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>TBCD5_MOUSE (Q80XQ2) TBC1 domain family member 5|
          Length = 815

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
 Frame = -2

Query: 480 LPVHLLRVRDHPLQHSIRASCHLLILQYPSKEIKDRIHQFIRRLRSQ-GLGHSQRSHPCS 304
           + +HL+ ++D  LQ ++     +L+     K+IKD +   +R  +SQ   G +++     
Sbjct: 637 MDMHLVNIQDVVLQENLEKEDQILVSLAGLKQIKDILKGSLRFNQSQLEAGENEQITIAD 696

Query: 303 RHQVSGSRCRQLQIPR 256
            H  S  + +  Q+PR
Sbjct: 697 DHYCSSGQDQGSQVPR 712


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,202,663
Number of Sequences: 219361
Number of extensions: 1464993
Number of successful extensions: 4264
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4261
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6484657212
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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