>gb|AC091153.10| Homo sapiens chromosome 17, clone RP11-314A20, complete sequence
          Length = 195494

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 64     acaaatggcaaaagacaagac 84
              |||||||||||||||||||||
Sbjct: 154427 acaaatggcaaaagacaagac 154407

>emb|BX004803.11| Zebrafish DNA sequence from clone CH211-119C20 in linkage group 20
             Contains a novel gene simialr to human and mouse CASKIN2
             (CASK interacting protein 2), a novel gene for a
             nucleoside-diphosphate kinase (wu:fk59e05) and a CpG
             island, complete sequence
          Length = 167376

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 68    atggcaaaagacaagacgcat 88
             |||||||||||||||||||||
Sbjct: 56641 atggcaaaagacaagacgcat 56661

>gb|AC118754.6| Homo sapiens, clone RP11-141J13, complete sequence
          Length = 185378

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 64    acaaatggcaaaagacaagac 84
             |||||||||||||||||||||
Sbjct: 33533 acaaatggcaaaagacaagac 33513

>emb|CR478232.3| Zebrafish DNA sequence from clone CH211-86D22 in linkage group 20,
            complete sequence
          Length = 27408

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 68   atggcaaaagacaagacgcat 88
            |||||||||||||||||||||
Sbjct: 3142 atggcaaaagacaagacgcat 3122

>gb|AC027763.9| Homo sapiens chromosome 17, clone RP11-530N7, complete sequence
          Length = 169770

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 64     acaaatggcaaaagacaagac 84
              |||||||||||||||||||||
Sbjct: 136529 acaaatggcaaaagacaagac 136549

>gb|AC034305.6|AC034305 Homo sapiens chromosome 17, clone RP11-609D21, complete sequence
          Length = 103699

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 64    acaaatggcaaaagacaagac 84
             |||||||||||||||||||||
Sbjct: 94372 acaaatggcaaaagacaagac 94352

>emb|CR925805.14| Zebrafish DNA sequence from clone DKEY-99N20 in linkage group 16,
              complete sequence
          Length = 180576

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 68     atggcaaaagacaagacgcat 88
              |||||||||||||||||||||
Sbjct: 110312 atggcaaaagacaagacgcat 110332

>gb|AC122906.4| Mus musculus BAC clone RP23-47D11 from 10, complete sequence
          Length = 191190

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 62     ttacaaatggcaaaagacaa 81
              ||||||||||||||||||||
Sbjct: 113437 ttacaaatggcaaaagacaa 113456

>gb|AC019127.10| Homo sapiens BAC clone RP11-558B7 from 2, complete sequence
          Length = 105118

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   ccaattactcacaaaagata 120
             ||||||||||||||||||||
Sbjct: 53735 ccaattactcacaaaagata 53716

>gb|AC147615.3| Mus musculus BAC clone RP23-408N24 from 10, complete sequence
          Length = 205962

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    ttacaaatggcaaaagacaa 81
             ||||||||||||||||||||
Sbjct: 89676 ttacaaatggcaaaagacaa 89695

>gb|AC122364.4| Mus musculus chromosome 8 clone RP23-442K12, complete sequence
          Length = 193183

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 111    acaaaagatacaacagtct 129
              |||||||||||||||||||
Sbjct: 129041 acaaaagatacaacagtct 129023

>gb|AC167362.2| Mus musculus BAC clone RP23-74P17 from chromosome 7, complete sequence
          Length = 215537

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 64    acaaatggcaaaagacaag 82
             |||||||||||||||||||
Sbjct: 30517 acaaatggcaaaagacaag 30535

>gb|U23450.1| Caenorhabditis elegans cosmid C30B5, complete sequence
          Length = 41334

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 134 agtacctgaaaaccctaat 152
           |||||||||||||||||||
Sbjct: 30  agtacctgaaaaccctaat 12

>gb|AC147055.2| Homo sapiens BAC clone RP11-1267H10 from 4, complete sequence
          Length = 184963

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 63    tacaaatggcaaaagacaa 81
             |||||||||||||||||||
Sbjct: 11230 tacaaatggcaaaagacaa 11212

>gb|AC127356.4| Mus musculus BAC clone RP23-100B5 from chromosome 8, complete sequence
          Length = 199258

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 111   acaaaagatacaacagtct 129
             |||||||||||||||||||
Sbjct: 19536 acaaaagatacaacagtct 19518

>gb|AC121989.2| Mus musculus BAC clone RP24-298C8 from 7, complete sequence
          Length = 175515

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 64     acaaatggcaaaagacaag 82
              |||||||||||||||||||
Sbjct: 117594 acaaatggcaaaagacaag 117612

>gb|AY422718.1| Pseudomonas sp. K82 catechol 2,3 gene cluster, partial sequence
          Length = 4898

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 124 cagtctggccagtacctga 142
           |||||||||||||||||||
Sbjct: 443 cagtctggccagtacctga 461

>emb|CR405715.16| Zebrafish DNA sequence from clone DKEY-47K20 in linkage group 18,
             complete sequence
          Length = 170849

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 49    acagccaaaagagttacaa 67
             |||||||||||||||||||
Sbjct: 36804 acagccaaaagagttacaa 36786

>emb|Y11526.1|ZMCK2 Z.mays mRNA for casein kinase II alpha subunit
          Length = 1388

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 92   gaatctgggccaattactc 110
            |||||||||||||||||||
Sbjct: 1115 gaatctgggccaattactc 1133

>emb|CR846083.9| Zebrafish DNA sequence from clone DKEYP-34A6 in linkage group 14,
              complete sequence
          Length = 163337

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 66     aaatggcaaaagacaagac 84
              |||||||||||||||||||
Sbjct: 145642 aaatggcaaaagacaagac 145660

>gb|AF098987.1| Caenorhabditis elegans cosmid F40H3, complete sequence
          Length = 24810

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 134   agtacctgaaaaccctaat 152
             |||||||||||||||||||
Sbjct: 23590 agtacctgaaaaccctaat 23572

>ref|NM_062834.2| Caenorhabditis elegans ForKHead transcription factor family member
           (fkh-8) (fkh-8) mRNA, complete cds
          Length = 1053

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 134 agtacctgaaaaccctaat 152
           |||||||||||||||||||
Sbjct: 81  agtacctgaaaaccctaat 99

>gb|AC093778.3| Homo sapiens BAC clone RP11-167F5 from 4, complete sequence
          Length = 142526

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 50    cagccaaaagagttacaaa 68
             |||||||||||||||||||
Sbjct: 80189 cagccaaaagagttacaaa 80207

>gb|AC084500.1|CBRG13G15 Caenorhabditis briggsae cosmid G13G15, complete sequence
          Length = 17199

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 91    agaatctgggccaattactcaca 113
             |||||||||||||||| ||||||
Sbjct: 12328 agaatctgggccaatttctcaca 12350

>dbj|AB177545.1| Delftia acidovorans ORF7NA, ORF7NB, ORF7NC, ORF7ND, ORF7NE, ORF7NF,
            ORF7NG, ORF7NH genes for glutamine synthetase, glutamine
            amidotransferase, large subunit of aniline dioxygenase,
            small subunit of aniline dioxygenase, reductase,
            LysR-type regulatory gene, small ferredoxin-like protein,
            catechol 2,3-dioxygenase, complete cds
          Length = 8039

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 124  cagtctggccagtacctga 142
            |||||||||||||||||||
Sbjct: 4612 cagtctggccagtacctga 4630

>gb|AC134921.2| Homo sapiens BAC clone RP11-597F18 from 4, complete sequence
          Length = 96776

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 63    tacaaatggcaaaagacaa 81
             |||||||||||||||||||
Sbjct: 19232 tacaaatggcaaaagacaa 19214

>emb|BX545847.9| Zebrafish DNA sequence from clone RP71-14M1 in linkage group 19,
             complete sequence
          Length = 128770

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 66    aaatggcaaaagacaagac 84
             |||||||||||||||||||
Sbjct: 80672 aaatggcaaaagacaagac 80654

>emb|AJ296303.1|MMU296303 Mus musculus tub gene for tubby protein, exons 1-12
          Length = 163455

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 64    acaaatggcaaaagacaag 82
             |||||||||||||||||||
Sbjct: 39594 acaaatggcaaaagacaag 39612

>dbj|AP002014.3| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:2262K17, complete
             sequence
          Length = 132614

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 50    cagccaaaagagttacaaa 68
             |||||||||||||||||||
Sbjct: 16488 cagccaaaagagttacaaa 16470

>dbj|AB004065.1| Pseudomonas sp. genes for ORF1, ORF2, ORF3, chloroplast-type
           ferredoxin, catechol 2,3-dioxygenase, 2-hydroxymuconic
           6-semialdehyde dehydrogenase, partial and complete cds
          Length = 5278

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 124 cagtctggccagtacctga 142
           |||||||||||||||||||
Sbjct: 443 cagtctggccagtacctga 461


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,324,143
Number of Sequences: 3902068
Number of extensions: 1324143
Number of successful extensions: 89214
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89159
Number of HSP's gapped (non-prelim): 55
length of query: 164
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 142
effective length of database: 17,147,199,772
effective search space: 2434902367624
effective search space used: 2434902367624
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)