ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd24c10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_471063.1| Oryza sativa (japonica cultivar-group), predic... 283 4e-73
2dbj|AK102071.1| Oryza sativa (japonica cultivar-group) cDNA clon... 283 4e-73
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 204 3e-49
4emb|AL606450.3|OSJN00001 Oryza sativa genomic DNA, chromosome 4,... 204 3e-49
5gb|AY109687.1| Zea mays CL45878_1 mRNA sequence 137 6e-29
6gb|AY620410.1| Zea mays arginine/serine-rich splicing factor 2 v... 131 3e-27
7gb|AY620409.1| Zea mays arginine/serine-rich splicing factor 2 v... 131 3e-27
8gb|AY620408.1| Zea mays arginine/serine-rich splicing factor 2 v... 131 3e-27
9gb|AY620407.1| Zea mays arginine/serine-rich splicing factor 2 m... 131 3e-27
10gb|AY616024.1| Zea mays arginine/serine-rich splicing factor 2 (... 131 3e-27
11gb|AY620405.1| Zea mays arginine/serine-rich splicing factor 1 v... 129 1e-26
12gb|AY620404.1| Zea mays arginine/serine-rich splicing factor 1 v... 129 1e-26
13gb|AY620403.1| Zea mays arginine/serine-rich splicing factor 1 v... 129 1e-26
14gb|AY620402.1| Zea mays arginine/serine-rich splicing factor 1 m... 129 1e-26
15gb|AY616013.1| Zea mays arginine/serine-rich splicing factor 1 (... 109 1e-20
16ref|NM_116051.2| Arabidopsis thaliana ATRSP31; RNA binding / nuc... 52 0.003
17emb|X99435.1|ATRSP31 A.thaliana mRNA for arginine/serine-rich sp... 52 0.003
18emb|AL138642.1|ATF21F14 Arabidopsis thaliana DNA chromosome 3, B... 52 0.003
19gb|AY125565.1| Arabidopsis thaliana AT3g61860/F21F14_30 mRNA, co... 52 0.003
20gb|AF439831.1|AF439831 Arabidopsis thaliana AT3g61860/F21F14_30 ... 52 0.003
21emb|BX823950.1|CNS0A6JH Arabidopsis thaliana Full-length cDNA Co... 52 0.003
22emb|BX823547.1|CNS0A6LF Arabidopsis thaliana Full-length cDNA Co... 52 0.003
23emb|BX822079.1|CNS0A4WZ Arabidopsis thaliana Full-length cDNA Co... 52 0.003
24gb|BT017345.1| Zea mays clone EL01N0323C10.c mRNA sequence 48 0.040
25gb|AY107469.1| Zea mays PCO065052 mRNA sequence 48 0.040
26ref|NM_130226.2| Arabidopsis thaliana RNA binding / nucleic acid... 42 2.5
27ref|NM_201973.1| Arabidopsis thaliana RNA binding / nucleic acid... 42 2.5
28ref|XM_817268.1| Trypanosoma brucei TREU927 serine carboxypeptid... 42 2.5
29gb|BT000995.1| Arabidopsis thaliana clone U18735 putative argini... 42 2.5
30emb|AL359377.18| Human DNA sequence from clone RP11-96C4 on chro... 42 2.5
31gb|AY065237.1| Arabidopsis thaliana putative arginine/serine-ric... 42 2.5
32gb|AC006418.4| Arabidopsis thaliana chromosome 2 clone F13A10 ma... 42 2.5
33emb|BX820508.1|CNS0A9OP Arabidopsis thaliana Full-length cDNA Co... 42 2.5
34emb|BX820396.1|CNS0A9MC Arabidopsis thaliana Full-length cDNA Co... 42 2.5
35emb|BX323079.7| Zebrafish DNA sequence from clone DKEYP-113D7 in... 42 2.5
36gb|AE015924.1| Porphyromonas gingivalis W83, complete genome 42 2.5
37gb|AC103673.8| Mus musculus chromosome 1, clone RP24-336F10, com... 40 9.8
38ref|NM_190415.1| Oryza sativa (japonica cultivar-group), predic... 40 9.8
39gb|BT018810.1| Zea mays clone EL01N0530C10.d mRNA sequence 40 9.8
40gb|AC129942.7| Mus musculus chromosome 8, clone RP23-267A22, com... 40 9.8
41ref|XM_606578.2| PREDICTED: Bos taurus similar to death effector... 40 9.8
42gb|AC132405.3| Mus musculus BAC clone RP23-332I1 from chromosome... 40 9.8
43gb|AC124475.3| Mus musculus BAC clone RP24-92F8 from chromosome ... 40 9.8
44gb|AC158625.9| Mus musculus 6 BAC RP23-78J15 (Roswell Park Cance... 40 9.8
45ref|XM_850587.1| PREDICTED: Canis familiaris similar to PMS1 pro... 40 9.8
46ref|XM_536002.2| PREDICTED: Canis familiaris similar to PMS1 pro... 40 9.8
47gb|AC129013.3| Mus musculus BAC clone RP24-550P17 from chromosom... 40 9.8
48gb|AC160032.7| Mus musculus 6 BAC RP24-179I4 (Roswell Park Cance... 40 9.8
49ref|XM_504727.1| Yarrowia lipolytica CLIB122, YALI0E33377g predi... 40 9.8
50emb|AL109830.11|HSJ977K12 Human DNA sequence from clone RP5-977K... 40 9.8
51emb|AL009177.1|HS365E2 Human DNA sequence from clone RP3-365E2 o... 40 9.8
52emb|AJ843998.1| Plantago major mRNA for putative structural prot... 40 9.8
53emb|AJ843266.1| Plantago major partial mRNA for vascular specifi... 40 9.8
54gb|AC007716.8| Homo sapiens chromosome , clone RP11-94O8, comple... 40 9.8
55gb|AC048334.21| Homo sapiens 3 BAC RP11-572C15 (Roswell Park Can... 40 9.8
56emb|BX323460.10| Zebrafish DNA sequence from clone DKEYP-47G11 i... 40 9.8
57gb|AC155814.6| Mus musculus BAC clone RP24-137M22 from chromosom... 40 9.8
58gb|AC025767.6|AC025767 Homo sapiens chromosome 5 clone CTD-2087B... 40 9.8
59gb|AY634297.1| Caenorhabditis briggsae strain AF16 gpa-4 gene, c... 40 9.8
60gb|AC044817.5|AC044817 Homo sapiens, clone RP11-197P20, complete... 40 9.8
61dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
62gb|AC008177.3| Homo sapiens BAC clone RP11-527A7 from 2, complet... 40 9.8
63gb|AC006440.9|AC006440 Homo sapiens chromosome 17, clone RP11-11... 40 9.8
64gb|AC091182.5| Homo sapiens chromosome 8, clone RP11-527N22, com... 40 9.8
65dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
66dbj|AK120476.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.8
67dbj|AK073922.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.8
68gb|AC137151.3| Mus musculus BAC clone RP24-217N24 from 6, comple... 40 9.8
69gb|AY103933.1| Zea mays PCO094535 mRNA sequence 40 9.8
70dbj|AP006306.1| Homo sapiens genomic DNA, chromosome 8 clone:RP1... 40 9.8
71dbj|AP006304.1| Homo sapiens genomic DNA, chromosome 8 clone:RP1... 40 9.8
72gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 9.8
73gb|AE000520.1| Treponema pallidum subsp. pallidum str. Nichols c... 40 9.8
74emb|AL928740.6| Zebrafish DNA sequence from clone CH211-129O13, ... 40 9.8
75emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 40 9.8
76dbj|AP000070.1| Homo sapiens genomic DNA, chromosome 8p11.2, sen... 40 9.8
77dbj|AP005019.1| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 9.8 
>ref|XM_471063.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 738

 Score =  283 bits (143), Expect = 4e-73
 Identities = 251/287 (87%)
 Strand = Plus / Minus

                                                                       
Query: 396 tcatacttgtcacctggttcactatcatccctgaaggcatactcaacagaaatcaccctg 455
           |||||| |||||||| ||||  ||||||||||||||||||||||||||||||||||||||
Sbjct: 524 tcatacctgtcacctcgttctgtatcatccctgaaggcatactcaacagaaatcaccctg 465

                                                                       
Query: 456 tccagtaacttcgtcaaatgagtagcatctagtgcttttgaggcttcttcctgagtttca 515
           ||||  ||||| ||  |||||||||| || |||||||||| ||| |||||||| ||||||
Sbjct: 464 tccaacaacttggtagaatgagtagcttcaagtgcttttgtggcctcttcctgtgtttca 405

                                                                       
Query: 516 aattgcacaaaagcaaagttcttccttatccgaacatttgaaatcctcccaaatggacca 575
           || |||||||||||||||||| |||| ||||||||||| |||| | | ||||||||  | 
Sbjct: 404 aactgcacaaaagcaaagttcctcctgatccgaacattcgaaagctttccaaatggttcg 345

                                                                       
Query: 576 aaatgccgttcaagatcactgactcttgtgttgattgggtcaaagttaattacaaacagt 635
           ||||||| ||| | |||| ||||||| |||||||| |||||||||||||| ||||| |||
Sbjct: 344 aaatgcctttcgatatcagtgactctggtgttgatggggtcaaagttaatgacaaatagt 285

                                                          
Query: 636 gtcttggtgggcttagtattcactggtggtttactatagccatcacg 682
           ||||| ||||| ||||||||||| |||||||| ||||||||||||||
Sbjct: 284 gtcttcgtgggtttagtattcacaggtggtttgctatagccatcacg 238



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 168/209 (80%), Gaps = 9/209 (4%)
 Strand = Plus / Minus

                                                                       
Query: 168 tcataaccccttctgttgggagctggggatcttgagcgctggacaggagatcggcttcga 227
           |||||| | |||||||||| |  |||||||||||| ||| ||||||||||||||||||||
Sbjct: 734 tcataagctcttctgttggcaagtggggatcttgatcgccggacaggagatcggcttcga 675

                                                                       
Query: 228 tagcgatcacggacaggactcctgctcctgccatatgcaccatactgaggactcactgga 287
           |||||||||   ||||||||||||       |||| | ||| |||  |||||||  | ||
Sbjct: 674 tagcgatcattaacaggactcctgt------catacgaaccgtacacaggactcctttga 621

                                                                       
Query: 288 cgaccatagtcaggactaggtcgtgaccttcggtacactgggctaacagaacggcgatat 347
           ||||| ||||||||||| || ||||||||   ||||||||| ||||| || || ||||||
Sbjct: 620 cgaccgtagtcaggacttgggcgtgacct---gtacactggactaactgatcgacgatat 564

                                        
Query: 348 gaactgtcatcctgccttccataaccacc 376
           | ||| |||||  |||| ||||| |||||
Sbjct: 563 ggactatcatctcgcctaccatagccacc 535
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>dbj|AK102071.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082G11, full
           insert sequence
          Length = 1072

 Score =  283 bits (143), Expect = 4e-73
 Identities = 251/287 (87%)
 Strand = Plus / Minus

                                                                       
Query: 396 tcatacttgtcacctggttcactatcatccctgaaggcatactcaacagaaatcaccctg 455
           |||||| |||||||| ||||  ||||||||||||||||||||||||||||||||||||||
Sbjct: 638 tcatacctgtcacctcgttctgtatcatccctgaaggcatactcaacagaaatcaccctg 579

                                                                       
Query: 456 tccagtaacttcgtcaaatgagtagcatctagtgcttttgaggcttcttcctgagtttca 515
           ||||  ||||| ||  |||||||||| || |||||||||| ||| |||||||| ||||||
Sbjct: 578 tccaacaacttggtagaatgagtagcttcaagtgcttttgtggcctcttcctgtgtttca 519

                                                                       
Query: 516 aattgcacaaaagcaaagttcttccttatccgaacatttgaaatcctcccaaatggacca 575
           || |||||||||||||||||| |||| ||||||||||| |||| | | ||||||||  | 
Sbjct: 518 aactgcacaaaagcaaagttcctcctgatccgaacattcgaaagctttccaaatggttcg 459

                                                                       
Query: 576 aaatgccgttcaagatcactgactcttgtgttgattgggtcaaagttaattacaaacagt 635
           ||||||| ||| | |||| ||||||| |||||||| |||||||||||||| ||||| |||
Sbjct: 458 aaatgcctttcgatatcagtgactctggtgttgatggggtcaaagttaatgacaaatagt 399

                                                          
Query: 636 gtcttggtgggcttagtattcactggtggtttactatagccatcacg 682
           ||||| ||||| ||||||||||| |||||||| ||||||||||||||
Sbjct: 398 gtcttcgtgggtttagtattcacaggtggtttgctatagccatcacg 352



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 168/209 (80%), Gaps = 9/209 (4%)
 Strand = Plus / Minus

                                                                       
Query: 168 tcataaccccttctgttgggagctggggatcttgagcgctggacaggagatcggcttcga 227
           |||||| | |||||||||| |  |||||||||||| ||| ||||||||||||||||||||
Sbjct: 848 tcataagctcttctgttggcaagtggggatcttgatcgccggacaggagatcggcttcga 789

                                                                       
Query: 228 tagcgatcacggacaggactcctgctcctgccatatgcaccatactgaggactcactgga 287
           |||||||||   ||||||||||||       |||| | ||| |||  |||||||  | ||
Sbjct: 788 tagcgatcattaacaggactcctgt------catacgaaccgtacacaggactcctttga 735

                                                                       
Query: 288 cgaccatagtcaggactaggtcgtgaccttcggtacactgggctaacagaacggcgatat 347
           ||||| ||||||||||| || ||||||||   ||||||||| ||||| || || ||||||
Sbjct: 734 cgaccgtagtcaggacttgggcgtgacct---gtacactggactaactgatcgacgatat 678

                                        
Query: 348 gaactgtcatcctgccttccataaccacc 376
           | ||| |||||  |||| ||||| |||||
Sbjct: 677 ggactatcatctcgcctaccatagccacc 649
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score =  204 bits (103), Expect = 3e-49
 Identities = 184/211 (87%)
 Strand = Plus / Plus

                                                                           
Query: 472     aatgagtagcatctagtgcttttgaggcttcttcctgagtttcaaattgcacaaaagcaa 531
               |||||||||| || |||||||||| ||| |||||||| |||||||| |||||||||||||
Sbjct: 1110194 aatgagtagcttcaagtgcttttgtggcctcttcctgtgtttcaaactgcacaaaagcaa 1110253

                                                                           
Query: 532     agttcttccttatccgaacatttgaaatcctcccaaatggaccaaaatgccgttcaagat 591
               ||||| |||| ||||||||||| |||| | | ||||||||  | ||||||| ||| | ||
Sbjct: 1110254 agttcctcctgatccgaacattcgaaagctttccaaatggttcgaaatgcctttcgatat 1110313

                                                                           
Query: 592     cactgactcttgtgttgattgggtcaaagttaattacaaacagtgtcttggtgggcttag 651
               || ||||||| |||||||| |||||||||||||| ||||| |||||||| ||||| ||||
Sbjct: 1110314 cagtgactctggtgttgatggggtcaaagttaatgacaaatagtgtcttcgtgggtttag 1110373

                                              
Query: 652     tattcactggtggtttactatagccatcacg 682
               ||||||| |||||||| ||||||||||||||
Sbjct: 1110374 tattcacaggtggtttgctatagccatcacg 1110404



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 60/64 (93%)
 Strand = Plus / Plus

                                                                           
Query: 396     tcatacttgtcacctggttcactatcatccctgaaggcatactcaacagaaatcaccctg 455
               |||||| |||||||| ||||  ||||||||||||||||||||||||||||||||||||||
Sbjct: 1108567 tcatacctgtcacctcgttctgtatcatccctgaaggcatactcaacagaaatcaccctg 1108626

                   
Query: 456     tcca 459
               ||||
Sbjct: 1108627 tcca 1108630



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                       
Query: 168     tcataaccccttctgttgggagctggggatcttgagcgctggacaggagatcggct 223
               |||||| | |||||||||| |  |||||||||||| ||| ||||||||||||||||
Sbjct: 1107980 tcataagctcttctgttggcaagtggggatcttgatcgccggacaggagatcggct 1108035



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 75/91 (82%), Gaps = 3/91 (3%)
 Strand = Plus / Plus

                                                                           
Query: 286     gacgaccatagtcaggactaggtcgtgaccttcggtacactgggctaacagaacggcgat 345
               ||||||| ||||||||||| || ||||||||   ||||||||| ||||| || || ||||
Sbjct: 1108469 gacgaccgtagtcaggacttgggcgtgacct---gtacactggactaactgatcgacgat 1108525

                                              
Query: 346     atgaactgtcatcctgccttccataaccacc 376
               ||| ||| |||||  |||| ||||| |||||
Sbjct: 1108526 atggactatcatctcgcctaccatagccacc 1108556
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>emb|AL606450.3|OSJN00001 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020P07,
             complete sequence
          Length = 167895

 Score =  204 bits (103), Expect = 3e-49
 Identities = 184/211 (87%)
 Strand = Plus / Plus

                                                                         
Query: 472   aatgagtagcatctagtgcttttgaggcttcttcctgagtttcaaattgcacaaaagcaa 531
             |||||||||| || |||||||||| ||| |||||||| |||||||| |||||||||||||
Sbjct: 52576 aatgagtagcttcaagtgcttttgtggcctcttcctgtgtttcaaactgcacaaaagcaa 52635

                                                                         
Query: 532   agttcttccttatccgaacatttgaaatcctcccaaatggaccaaaatgccgttcaagat 591
             ||||| |||| ||||||||||| |||| | | ||||||||  | ||||||| ||| | ||
Sbjct: 52636 agttcctcctgatccgaacattcgaaagctttccaaatggttcgaaatgcctttcgatat 52695

                                                                         
Query: 592   cactgactcttgtgttgattgggtcaaagttaattacaaacagtgtcttggtgggcttag 651
             || ||||||| |||||||| |||||||||||||| ||||| |||||||| ||||| ||||
Sbjct: 52696 cagtgactctggtgttgatggggtcaaagttaatgacaaatagtgtcttcgtgggtttag 52755

                                            
Query: 652   tattcactggtggtttactatagccatcacg 682
             ||||||| |||||||| ||||||||||||||
Sbjct: 52756 tattcacaggtggtttgctatagccatcacg 52786



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 60/64 (93%)
 Strand = Plus / Plus

                                                                         
Query: 396   tcatacttgtcacctggttcactatcatccctgaaggcatactcaacagaaatcaccctg 455
             |||||| |||||||| ||||  ||||||||||||||||||||||||||||||||||||||
Sbjct: 50949 tcatacctgtcacctcgttctgtatcatccctgaaggcatactcaacagaaatcaccctg 51008

                 
Query: 456   tcca 459
             ||||
Sbjct: 51009 tcca 51012



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                     
Query: 168   tcataaccccttctgttgggagctggggatcttgagcgctggacaggagatcggct 223
             |||||| | |||||||||| |  |||||||||||| ||| ||||||||||||||||
Sbjct: 50362 tcataagctcttctgttggcaagtggggatcttgatcgccggacaggagatcggct 50417



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 75/91 (82%), Gaps = 3/91 (3%)
 Strand = Plus / Plus

                                                                         
Query: 286   gacgaccatagtcaggactaggtcgtgaccttcggtacactgggctaacagaacggcgat 345
             ||||||| ||||||||||| || ||||||||   ||||||||| ||||| || || ||||
Sbjct: 50851 gacgaccgtagtcaggacttgggcgtgacct---gtacactggactaactgatcgacgat 50907

                                            
Query: 346   atgaactgtcatcctgccttccataaccacc 376
             ||| ||| |||||  |||| ||||| |||||
Sbjct: 50908 atggactatcatctcgcctaccatagccacc 50938
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>gb|AY109687.1| Zea mays CL45878_1 mRNA sequence
          Length = 1054

 Score =  137 bits (69), Expect = 6e-29
 Identities = 195/237 (82%)
 Strand = Plus / Plus

                                                                       
Query: 419 atcatccctgaaggcatactcaacagaaatcaccctgtccagtaacttcgtcaaatgagt 478
           ||||||||| |||||||||||||||||||||||||| ||||  | | | ||   ||||||
Sbjct: 426 atcatccctaaaggcatactcaacagaaatcaccctatccaaaagcatggtagcatgagt 485

                                                                       
Query: 479 agcatctagtgcttttgaggcttcttcctgagtttcaaattgcacaaaagcaaagttctt 538
           ||| || || || ||   |||||||||  | ||||||||  | |||||||||||||||||
Sbjct: 486 agcttcaagagccttacgggcttcttctagtgtttcaaaccggacaaaagcaaagttctt 545

                                                                       
Query: 539 ccttatccgaacatttgaaatcctcccaaatggaccaaaatgccgttcaagatcactgac 598
           ||||||||||||| |||| ||  ||||||||||    || |||| ||| |  ||||||||
Sbjct: 546 ccttatccgaacacttgatatgttcccaaatggtgtgaagtgcctttcgatgtcactgac 605

                                                                    
Query: 599 tcttgtgttgattgggtcaaagttaattacaaacagtgtcttggtgggcttagtatt 655
           ||||||||| ||||| ||||||||||| |||||||||||| | || |||||||||||
Sbjct: 606 tcttgtgttcattggatcaaagttaatgacaaacagtgtcctagttggcttagtatt 662



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 128/157 (81%), Gaps = 3/157 (1%)
 Strand = Plus / Plus

                                                                       
Query: 157 ttctcgattagtcataaccccttctgttgggagctggggatcttgagcgctggacaggag 216
           |||| |||||||||||  | |||| ||||| || |||||||||||| || |   ||||||
Sbjct: 194 ttcttgattagtcatatgctcttcggttggcaggtggggatcttgatcggtaagcaggag 253

                                                                       
Query: 217 atcggcttcgatagcgatcacggacaggactcctgctcctgccatatgcaccatactgag 276
           |||   | |||||||| ||||| |||||||| |||||||||||||| | ||||||   ||
Sbjct: 254 atc---tccgatagcggtcacgaacaggacttctgctcctgccatacgaaccatatacag 310

                                                
Query: 277 gactcactggacgaccatagtcaggactaggtcgtga 313
           ||||  |||| ||||||||||| |||||||| |||||
Sbjct: 311 gacttgctgggcgaccatagtctggactaggacgtga 347
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>gb|AY620410.1| Zea mays arginine/serine-rich splicing factor 2 variant 3 mRNA,
            complete cds, alternatively spliced
          Length = 1543

 Score =  131 bits (66), Expect = 3e-27
 Identities = 135/158 (85%)
 Strand = Plus / Minus

                                                                        
Query: 498  gcttcttcctgagtttcaaattgcacaaaagcaaagttcttccttatccgaacatttgaa 557
            |||||||||  ||||||||| || |||||||||||||||||||||||||||||| |||| 
Sbjct: 1081 gcttcttccatagtttcaaactgaacaaaagcaaagttcttccttatccgaacacttgat 1022

                                                                        
Query: 558  atcctcccaaatggaccaaaatgccgttcaagatcactgactcttgtgttgattgggtca 617
            ||  ||||||||||    || |||| ||| |  ||||||||||||||||| ||||| |||
Sbjct: 1021 atgttcccaaatggtgtgaagtgcctttcgatgtcactgactcttgtgttcattggatca 962

                                                  
Query: 618  aagttaattacaaacagtgtcttggtgggcttagtatt 655
            |||||||| |||||||||||| | || |||||||||||
Sbjct: 961  aagttaatgacaaacagtgtcctagttggcttagtatt 924



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 45/47 (95%)
 Strand = Plus / Minus

                                                           
Query: 413  ttcactatcatccctgaaggcatactcaacagaaatcaccctgtcca 459
            ||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 1166 ttcactatcatccctgaaggcgtactcgacagaaatcaccctgtcca 1120



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 44/50 (88%), Gaps = 3/50 (6%)
 Strand = Plus / Minus

                                                              
Query: 283  ctggacgaccatagtcaggactaggtcgtgaccttcggtacactgggcta 332
            |||| ||||||||||| |||||||| ||||||   |||||||||||||||
Sbjct: 1269 ctgggcgaccatagtctggactaggacgtgac---cggtacactgggcta 1223
to top
>gb|AY620409.1| Zea mays arginine/serine-rich splicing factor 2 variant 2 mRNA,
           complete cds, alternatively spliced
          Length = 777

 Score =  131 bits (66), Expect = 3e-27
 Identities = 135/158 (85%)
 Strand = Plus / Minus

                                                                       
Query: 498 gcttcttcctgagtttcaaattgcacaaaagcaaagttcttccttatccgaacatttgaa 557
           |||||||||  ||||||||| || |||||||||||||||||||||||||||||| |||| 
Sbjct: 432 gcttcttccatagtttcaaactgaacaaaagcaaagttcttccttatccgaacacttgat 373

                                                                       
Query: 558 atcctcccaaatggaccaaaatgccgttcaagatcactgactcttgtgttgattgggtca 617
           ||  ||||||||||    || |||| ||| |  ||||||||||||||||| ||||| |||
Sbjct: 372 atgttcccaaatggtgtgaagtgcctttcgatgtcactgactcttgtgttcattggatca 313

                                                 
Query: 618 aagttaattacaaacagtgtcttggtgggcttagtatt 655
           |||||||| |||||||||||| | || |||||||||||
Sbjct: 312 aagttaatgacaaacagtgtcctagttggcttagtatt 275



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 45/47 (95%)
 Strand = Plus / Minus

                                                          
Query: 413 ttcactatcatccctgaaggcatactcaacagaaatcaccctgtcca 459
           ||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 517 ttcactatcatccctgaaggcgtactcgacagaaatcaccctgtcca 471
to top
>gb|AY620408.1| Zea mays arginine/serine-rich splicing factor 2 variant 1 mRNA,
           complete cds, alternatively spliced
          Length = 1294

 Score =  131 bits (66), Expect = 3e-27
 Identities = 135/158 (85%)
 Strand = Plus / Minus

                                                                       
Query: 498 gcttcttcctgagtttcaaattgcacaaaagcaaagttcttccttatccgaacatttgaa 557
           |||||||||  ||||||||| || |||||||||||||||||||||||||||||| |||| 
Sbjct: 832 gcttcttccatagtttcaaactgaacaaaagcaaagttcttccttatccgaacacttgat 773

                                                                       
Query: 558 atcctcccaaatggaccaaaatgccgttcaagatcactgactcttgtgttgattgggtca 617
           ||  ||||||||||    || |||| ||| |  ||||||||||||||||| ||||| |||
Sbjct: 772 atgttcccaaatggtgtgaagtgcctttcgatgtcactgactcttgtgttcattggatca 713

                                                 
Query: 618 aagttaattacaaacagtgtcttggtgggcttagtatt 655
           |||||||| |||||||||||| | || |||||||||||
Sbjct: 712 aagttaatgacaaacagtgtcctagttggcttagtatt 675



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 45/47 (95%)
 Strand = Plus / Minus

                                                          
Query: 413 ttcactatcatccctgaaggcatactcaacagaaatcaccctgtcca 459
           ||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 917 ttcactatcatccctgaaggcgtactcgacagaaatcaccctgtcca 871



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 44/50 (88%), Gaps = 3/50 (6%)
 Strand = Plus / Minus

                                                              
Query: 283  ctggacgaccatagtcaggactaggtcgtgaccttcggtacactgggcta 332
            |||| ||||||||||| |||||||| ||||||   |||||||||||||||
Sbjct: 1020 ctgggcgaccatagtctggactaggacgtgac---cggtacactgggcta 974
to top
>gb|AY620407.1| Zea mays arginine/serine-rich splicing factor 2 mRNA, complete cds
          Length = 915

 Score =  131 bits (66), Expect = 3e-27
 Identities = 135/158 (85%)
 Strand = Plus / Minus

                                                                       
Query: 498 gcttcttcctgagtttcaaattgcacaaaagcaaagttcttccttatccgaacatttgaa 557
           |||||||||  ||||||||| || |||||||||||||||||||||||||||||| |||| 
Sbjct: 453 gcttcttccatagtttcaaactgaacaaaagcaaagttcttccttatccgaacacttgat 394

                                                                       
Query: 558 atcctcccaaatggaccaaaatgccgttcaagatcactgactcttgtgttgattgggtca 617
           ||  ||||||||||    || |||| ||| |  ||||||||||||||||| ||||| |||
Sbjct: 393 atgttcccaaatggtgtgaagtgcctttcgatgtcactgactcttgtgttcattggatca 334

                                                 
Query: 618 aagttaattacaaacagtgtcttggtgggcttagtatt 655
           |||||||| |||||||||||| | || |||||||||||
Sbjct: 333 aagttaatgacaaacagtgtcctagttggcttagtatt 296



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 45/47 (95%)
 Strand = Plus / Minus

                                                          
Query: 413 ttcactatcatccctgaaggcatactcaacagaaatcaccctgtcca 459
           ||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 538 ttcactatcatccctgaaggcgtactcgacagaaatcaccctgtcca 492



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 44/50 (88%), Gaps = 3/50 (6%)
 Strand = Plus / Minus

                                                             
Query: 283 ctggacgaccatagtcaggactaggtcgtgaccttcggtacactgggcta 332
           |||| ||||||||||| |||||||| ||||||   |||||||||||||||
Sbjct: 641 ctgggcgaccatagtctggactaggacgtgac---cggtacactgggcta 595
to top
>gb|AY616024.1| Zea mays arginine/serine-rich splicing factor 2 (SRP2) gene, complete
            cds, alternatively spliced
          Length = 3034

 Score =  131 bits (66), Expect = 3e-27
 Identities = 135/158 (85%)
 Strand = Plus / Minus

                                                                        
Query: 498  gcttcttcctgagtttcaaattgcacaaaagcaaagttcttccttatccgaacatttgaa 557
            |||||||||  ||||||||| || |||||||||||||||||||||||||||||| |||| 
Sbjct: 1712 gcttcttccatagtttcaaactgaacaaaagcaaagttcttccttatccgaacacttgat 1653

                                                                        
Query: 558  atcctcccaaatggaccaaaatgccgttcaagatcactgactcttgtgttgattgggtca 617
            ||  ||||||||||    || |||| ||| |  ||||||||||||||||| ||||| |||
Sbjct: 1652 atgttcccaaatggtgtgaagtgcctttcgatgtcactgactcttgtgttcattggatca 1593

                                                  
Query: 618  aagttaattacaaacagtgtcttggtgggcttagtatt 655
            |||||||| |||||||||||| | || |||||||||||
Sbjct: 1592 aagttaatgacaaacagtgtcctagttggcttagtatt 1555



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 45/47 (95%)
 Strand = Plus / Minus

                                                           
Query: 413  ttcactatcatccctgaaggcatactcaacagaaatcaccctgtcca 459
            ||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 2203 ttcactatcatccctgaaggcgtactcgacagaaatcaccctgtcca 2157



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 44/50 (88%), Gaps = 3/50 (6%)
 Strand = Plus / Minus

                                                              
Query: 283  ctggacgaccatagtcaggactaggtcgtgaccttcggtacactgggcta 332
            |||| ||||||||||| |||||||| ||||||   |||||||||||||||
Sbjct: 2306 ctgggcgaccatagtctggactaggacgtgac---cggtacactgggcta 2260
to top
>gb|AY620405.1| Zea mays arginine/serine-rich splicing factor 1 variant 3 mRNA,
           complete cds, alternatively spliced
          Length = 1144

 Score =  129 bits (65), Expect = 1e-26
 Identities = 194/237 (81%)
 Strand = Plus / Minus

                                                                       
Query: 419 atcatccctgaaggcatactcaacagaaatcaccctgtccagtaacttcgtcaaatgagt 478
           ||||||||| |||||||||||||||||||||||||| ||||  | | | ||   ||||||
Sbjct: 881 atcatccctaaaggcatactcaacagaaatcaccctatccaaaagcatggtagcatgagt 822

                                                                       
Query: 479 agcatctagtgcttttgaggcttcttcctgagtttcaaattgcacaaaagcaaagttctt 538
           ||| || || || ||   |||||||||  | ||||||||  | |||||||||||||||||
Sbjct: 821 agcttcaagagccttacgggcttcttctagtgtttcaaaccggacaaaagcaaagttctt 762

                                                                       
Query: 539 ccttatccgaacatttgaaatcctcccaaatggaccaaaatgccgttcaagatcactgac 598
           |||||||| |||| |||| ||  ||||||||||  |||| || | ||| | |||||||||
Sbjct: 761 ccttatcctaacacttgatatgttcccaaatggtgcaaagtgtctttcgatatcactgac 702

                                                                    
Query: 599 tcttgtgttgattgggtcaaagttaattacaaacagtgtcttggtgggcttagtatt 655
           ||||||||  ||||| ||||||||||| ||||||| ||| || || |||||||||||
Sbjct: 701 tcttgtgtccattggatcaaagttaatgacaaacaatgttttagttggcttagtatt 645



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 128/157 (81%), Gaps = 3/157 (1%)
 Strand = Plus / Minus

                                                                        
Query: 157  ttctcgattagtcataaccccttctgttgggagctggggatcttgagcgctggacaggag 216
            |||| |||||||||||  | |||| ||||| || |||||||||||| || |   ||||||
Sbjct: 1113 ttcttgattagtcatatgctcttcggttggcaggtggggatcttgatcggtaagcaggag 1054

                                                                        
Query: 217  atcggcttcgatagcgatcacggacaggactcctgctcctgccatatgcaccatactgag 276
            |||   | |||||||| ||||| |||||||| |||||||||||||| | ||||||   ||
Sbjct: 1053 atc---tccgatagcggtcacgaacaggacttctgctcctgccatacgaaccatatacag 997

                                                 
Query: 277  gactcactggacgaccatagtcaggactaggtcgtga 313
            ||||  |||| ||||||||||| |||||||| |||||
Sbjct: 996  gacttgctgggcgaccatagtctggactaggacgtga 960
to top
>gb|AY620404.1| Zea mays arginine/serine-rich splicing factor 1 variant 2 mRNA,
           complete cds, alternatively spliced
          Length = 1243

 Score =  129 bits (65), Expect = 1e-26
 Identities = 194/237 (81%)
 Strand = Plus / Minus

                                                                       
Query: 419 atcatccctgaaggcatactcaacagaaatcaccctgtccagtaacttcgtcaaatgagt 478
           ||||||||| |||||||||||||||||||||||||| ||||  | | | ||   ||||||
Sbjct: 980 atcatccctaaaggcatactcaacagaaatcaccctatccaaaagcatggtagcatgagt 921

                                                                       
Query: 479 agcatctagtgcttttgaggcttcttcctgagtttcaaattgcacaaaagcaaagttctt 538
           ||| || || || ||   |||||||||  | ||||||||  | |||||||||||||||||
Sbjct: 920 agcttcaagagccttacgggcttcttctagtgtttcaaaccggacaaaagcaaagttctt 861

                                                                       
Query: 539 ccttatccgaacatttgaaatcctcccaaatggaccaaaatgccgttcaagatcactgac 598
           |||||||| |||| |||| ||  ||||||||||  |||| || | ||| | |||||||||
Sbjct: 860 ccttatcctaacacttgatatgttcccaaatggtgcaaagtgtctttcgatatcactgac 801

                                                                    
Query: 599 tcttgtgttgattgggtcaaagttaattacaaacagtgtcttggtgggcttagtatt 655
           ||||||||  ||||| ||||||||||| ||||||| ||| || || |||||||||||
Sbjct: 800 tcttgtgtccattggatcaaagttaatgacaaacaatgttttagttggcttagtatt 744



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 128/157 (81%), Gaps = 3/157 (1%)
 Strand = Plus / Minus

                                                                        
Query: 157  ttctcgattagtcataaccccttctgttgggagctggggatcttgagcgctggacaggag 216
            |||| |||||||||||  | |||| ||||| || |||||||||||| || |   ||||||
Sbjct: 1212 ttcttgattagtcatatgctcttcggttggcaggtggggatcttgatcggtaagcaggag 1153

                                                                        
Query: 217  atcggcttcgatagcgatcacggacaggactcctgctcctgccatatgcaccatactgag 276
            |||   | |||||||| ||||| |||||||| |||||||||||||| | ||||||   ||
Sbjct: 1152 atc---tccgatagcggtcacgaacaggacttctgctcctgccatacgaaccatatacag 1096

                                                 
Query: 277  gactcactggacgaccatagtcaggactaggtcgtga 313
            ||||  |||| ||||||||||| |||||||| |||||
Sbjct: 1095 gacttgctgggcgaccatagtctggactaggacgtga 1059
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>gb|AY620403.1| Zea mays arginine/serine-rich splicing factor 1 variant 1 mRNA,
            complete cds, alternatively spliced
          Length = 1408

 Score =  129 bits (65), Expect = 1e-26
 Identities = 194/237 (81%)
 Strand = Plus / Minus

                                                                        
Query: 419  atcatccctgaaggcatactcaacagaaatcaccctgtccagtaacttcgtcaaatgagt 478
            ||||||||| |||||||||||||||||||||||||| ||||  | | | ||   ||||||
Sbjct: 1145 atcatccctaaaggcatactcaacagaaatcaccctatccaaaagcatggtagcatgagt 1086

                                                                        
Query: 479  agcatctagtgcttttgaggcttcttcctgagtttcaaattgcacaaaagcaaagttctt 538
            ||| || || || ||   |||||||||  | ||||||||  | |||||||||||||||||
Sbjct: 1085 agcttcaagagccttacgggcttcttctagtgtttcaaaccggacaaaagcaaagttctt 1026

                                                                        
Query: 539  ccttatccgaacatttgaaatcctcccaaatggaccaaaatgccgttcaagatcactgac 598
            |||||||| |||| |||| ||  ||||||||||  |||| || | ||| | |||||||||
Sbjct: 1025 ccttatcctaacacttgatatgttcccaaatggtgcaaagtgtctttcgatatcactgac 966

                                                                     
Query: 599  tcttgtgttgattgggtcaaagttaattacaaacagtgtcttggtgggcttagtatt 655
            ||||||||  ||||| ||||||||||| ||||||| ||| || || |||||||||||
Sbjct: 965  tcttgtgtccattggatcaaagttaatgacaaacaatgttttagttggcttagtatt 909



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 128/157 (81%), Gaps = 3/157 (1%)
 Strand = Plus / Minus

                                                                        
Query: 157  ttctcgattagtcataaccccttctgttgggagctggggatcttgagcgctggacaggag 216
            |||| |||||||||||  | |||| ||||| || |||||||||||| || |   ||||||
Sbjct: 1377 ttcttgattagtcatatgctcttcggttggcaggtggggatcttgatcggtaagcaggag 1318

                                                                        
Query: 217  atcggcttcgatagcgatcacggacaggactcctgctcctgccatatgcaccatactgag 276
            |||   | |||||||| ||||| |||||||| |||||||||||||| | ||||||   ||
Sbjct: 1317 atc---tccgatagcggtcacgaacaggacttctgctcctgccatacgaaccatatacag 1261

                                                 
Query: 277  gactcactggacgaccatagtcaggactaggtcgtga 313
            ||||  |||| ||||||||||| |||||||| |||||
Sbjct: 1260 gacttgctgggcgaccatagtctggactaggacgtga 1224
to top
>gb|AY620402.1| Zea mays arginine/serine-rich splicing factor 1 mRNA, complete cds
          Length = 893

 Score =  129 bits (65), Expect = 1e-26
 Identities = 194/237 (81%)
 Strand = Plus / Minus

                                                                       
Query: 419 atcatccctgaaggcatactcaacagaaatcaccctgtccagtaacttcgtcaaatgagt 478
           ||||||||| |||||||||||||||||||||||||| ||||  | | | ||   ||||||
Sbjct: 630 atcatccctaaaggcatactcaacagaaatcaccctatccaaaagcatggtagcatgagt 571

                                                                       
Query: 479 agcatctagtgcttttgaggcttcttcctgagtttcaaattgcacaaaagcaaagttctt 538
           ||| || || || ||   |||||||||  | ||||||||  | |||||||||||||||||
Sbjct: 570 agcttcaagagccttacgggcttcttctagtgtttcaaaccggacaaaagcaaagttctt 511

                                                                       
Query: 539 ccttatccgaacatttgaaatcctcccaaatggaccaaaatgccgttcaagatcactgac 598
           |||||||| |||| |||| ||  ||||||||||  |||| || | ||| | |||||||||
Sbjct: 510 ccttatcctaacacttgatatgttcccaaatggtgcaaagtgtctttcgatatcactgac 451

                                                                    
Query: 599 tcttgtgttgattgggtcaaagttaattacaaacagtgtcttggtgggcttagtatt 655
           ||||||||  ||||| ||||||||||| ||||||| ||| || || |||||||||||
Sbjct: 450 tcttgtgtccattggatcaaagttaatgacaaacaatgttttagttggcttagtatt 394



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 128/157 (81%), Gaps = 3/157 (1%)
 Strand = Plus / Minus

                                                                       
Query: 157 ttctcgattagtcataaccccttctgttgggagctggggatcttgagcgctggacaggag 216
           |||| |||||||||||  | |||| ||||| || |||||||||||| || |   ||||||
Sbjct: 862 ttcttgattagtcatatgctcttcggttggcaggtggggatcttgatcggtaagcaggag 803

                                                                       
Query: 217 atcggcttcgatagcgatcacggacaggactcctgctcctgccatatgcaccatactgag 276
           |||   | |||||||| ||||| |||||||| |||||||||||||| | ||||||   ||
Sbjct: 802 atc---tccgatagcggtcacgaacaggacttctgctcctgccatacgaaccatatacag 746

                                                
Query: 277 gactcactggacgaccatagtcaggactaggtcgtga 313
           ||||  |||| ||||||||||| |||||||| |||||
Sbjct: 745 gacttgctgggcgaccatagtctggactaggacgtga 709
to top
>gb|AY616013.1| Zea mays arginine/serine-rich splicing factor 1 (SRP1) gene, complete
            cds, alternatively spliced; and arginine/serine-rich
            splicing factor 1 variant 4 (SRP1) gene, partial cds
          Length = 3835

 Score =  109 bits (55), Expect = 1e-20
 Identities = 133/159 (83%)
 Strand = Plus / Minus

                                                                        
Query: 497  ggcttcttcctgagtttcaaattgcacaaaagcaaagttcttccttatccgaacatttga 556
            |||||||||  | ||||||||  | ||||||||||||||||||||||||| |||| ||||
Sbjct: 1784 ggcttcttctagtgtttcaaaccggacaaaagcaaagttcttccttatcctaacacttga 1725

                                                                        
Query: 557  aatcctcccaaatggaccaaaatgccgttcaagatcactgactcttgtgttgattgggtc 616
             ||  ||||||||||  |||| || | ||| | |||||||||||||||||  ||||| ||
Sbjct: 1724 tatgttcccaaatggtgcaaagtgtctttcgatatcactgactcttgtgtccattggatc 1665

                                                   
Query: 617  aaagttaattacaaacagtgtcttggtgggcttagtatt 655
            ||||||||| ||||||| ||| || || |||||||||||
Sbjct: 1664 aaagttaatgacaaacaatgttttagttggcttagtatt 1626



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 76/89 (85%)
 Strand = Plus / Minus

                                                                        
Query: 225  cgatagcgatcacggacaggactcctgctcctgccatatgcaccatactgaggactcact 284
            |||||||| ||||| |||||||| |||||||||||||| | ||||||   ||||||  ||
Sbjct: 3035 cgatagcggtcacgaacaggacttctgctcctgccatacgaaccatatacaggacttgct 2976

                                         
Query: 285  ggacgaccatagtcaggactaggtcgtga 313
            || ||||||||||| |||||||| |||||
Sbjct: 2975 gggcgaccatagtctggactaggacgtga 2947



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                     
Query: 419  atcatccctgaaggcatactcaacagaaatcaccctgtcca 459
            ||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 2868 atcatccctaaaggcatactcaacagaaatcaccctatcca 2828
to top
>ref|NM_116051.2| Arabidopsis thaliana ATRSP31; RNA binding / nucleic acid binding
           AT3G61860 (ATRSP31) mRNA, complete cds
          Length = 1118

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 612 gggtcaaagttaattacaaacagtgtcttggtgggctt 649
           |||||||||||||| |||||||||||||| || |||||
Sbjct: 389 gggtcaaagttaatgacaaacagtgtctttgtaggctt 352
to top
>emb|X99435.1|ATRSP31 A.thaliana mRNA for arginine/serine-rich splicing factor, RSp31
          Length = 1043

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 612 gggtcaaagttaattacaaacagtgtcttggtgggctt 649
           |||||||||||||| |||||||||||||| || |||||
Sbjct: 380 gggtcaaagttaatgacaaacagtgtctttgtaggctt 343
to top
>emb|AL138642.1|ATF21F14 Arabidopsis thaliana DNA chromosome 3, BAC clone F21F14
          Length = 142001

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                   
Query: 612   gggtcaaagttaattacaaacagtgtcttggtgggctt 649
             |||||||||||||| |||||||||||||| || |||||
Sbjct: 63645 gggtcaaagttaatgacaaacagtgtctttgtaggctt 63682
to top
>gb|AY125565.1| Arabidopsis thaliana AT3g61860/F21F14_30 mRNA, complete cds
          Length = 795

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 612 gggtcaaagttaattacaaacagtgtcttggtgggctt 649
           |||||||||||||| |||||||||||||| || |||||
Sbjct: 305 gggtcaaagttaatgacaaacagtgtctttgtaggctt 268
to top
>gb|AF439831.1|AF439831 Arabidopsis thaliana AT3g61860/F21F14_30 mRNA, complete cds
          Length = 1090

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 612 gggtcaaagttaattacaaacagtgtcttggtgggctt 649
           |||||||||||||| |||||||||||||| || |||||
Sbjct: 389 gggtcaaagttaatgacaaacagtgtctttgtaggctt 352
to top
>emb|BX823950.1|CNS0A6JH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS9ZF03 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1462

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 612 gggtcaaagttaattacaaacagtgtcttggtgggctt 649
           |||||||||||||| |||||||||||||| || |||||
Sbjct: 840 gggtcaaagttaatgacaaacagtgtctttgtaggctt 803
to top
>emb|BX823547.1|CNS0A6LF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS4ZG03 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1506

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 612 gggtcaaagttaattacaaacagtgtcttggtgggctt 649
           |||||||||||||| |||||||||||||| || |||||
Sbjct: 892 gggtcaaagttaatgacaaacagtgtctttgtaggctt 855
to top
>emb|BX822079.1|CNS0A4WZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB10ZE01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1490

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 612 gggtcaaagttaattacaaacagtgtcttggtgggctt 649
           |||||||||||||| |||||||||||||| || |||||
Sbjct: 843 gggtcaaagttaatgacaaacagtgtctttgtaggctt 806
to top
>gb|BT017345.1| Zea mays clone EL01N0323C10.c mRNA sequence
          Length = 1281

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 432 gcatactcaacagaaatcaccctgtcca 459
           |||||||||||||| |||||||||||||
Sbjct: 645 gcatactcaacagagatcaccctgtcca 618



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 599 tcttgtgttgattgggtcaaagttaattacaaaca 633
           |||||||||||| ||||||||||| || |||||||
Sbjct: 478 tcttgtgttgatcgggtcaaagttgatcacaaaca 444
to top
>gb|AY107469.1| Zea mays PCO065052 mRNA sequence
          Length = 1116

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 432 gcatactcaacagaaatcaccctgtcca 459
           |||||||||||||| |||||||||||||
Sbjct: 465 gcatactcaacagagatcaccctgtcca 438



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 599 tcttgtgttgattgggtcaaagttaattacaaaca 633
           |||||||||||| ||||||||||| || |||||||
Sbjct: 298 tcttgtgttgatcgggtcaaagttgatcacaaaca 264
to top
>ref|NM_130226.2| Arabidopsis thaliana RNA binding / nucleic acid binding AT2G46610
           transcript variant AT2G46610.1 mRNA, complete cds
          Length = 1007

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 423 tccctgaaggcatactcaacagaaa 447
           ||||| |||||||||||||||||||
Sbjct: 595 tccctcaaggcatactcaacagaaa 571
to top
>ref|NM_201973.1| Arabidopsis thaliana RNA binding / nucleic acid binding AT2G46610
            transcript variant AT2G46610.2 mRNA, complete cds
          Length = 1539

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 423  tccctgaaggcatactcaacagaaa 447
            ||||| |||||||||||||||||||
Sbjct: 1118 tccctcaaggcatactcaacagaaa 1094
to top
>ref|XM_817268.1| Trypanosoma brucei TREU927 serine carboxypeptidase III precursor
           (Tb10.70.7100) partial mRNA
          Length = 1395

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 36  aggtgtcggaggacatgtccaactt 60
           |||||||||||||||||| ||||||
Sbjct: 446 aggtgtcggaggacatgtacaactt 470
to top
>gb|BT000995.1| Arabidopsis thaliana clone U18735 putative arginine/serine-rich
           splicing factor (At2g46610) mRNA, complete cds
          Length = 784

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 423 tccctgaaggcatactcaacagaaa 447
           ||||| |||||||||||||||||||
Sbjct: 500 tccctcaaggcatactcaacagaaa 476
to top
>emb|AL359377.18| Human DNA sequence from clone RP11-96C4 on chromosome 10 Contains part
             of the ANK3 gene for ankyrin 3, node of Ranvier (ankyrin
             G), complete sequence
          Length = 172177

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 106   ctagagctgaaacagcagatggagg 130
             |||||||||| ||||||||||||||
Sbjct: 52550 ctagagctgagacagcagatggagg 52574
to top
>gb|AY065237.1| Arabidopsis thaliana putative arginine/serine-rich splicing factor
           (At2g46610) mRNA, complete cds
          Length = 1025

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 423 tccctgaaggcatactcaacagaaa 447
           ||||| |||||||||||||||||||
Sbjct: 596 tccctcaaggcatactcaacagaaa 572
to top
>gb|AC006418.4| Arabidopsis thaliana chromosome 2 clone F13A10 map CIC06C03, complete
             sequence
          Length = 84825

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 423   tccctgaaggcatactcaacagaaa 447
             ||||| |||||||||||||||||||
Sbjct: 61758 tccctcaaggcatactcaacagaaa 61782
to top
>emb|BX820508.1|CNS0A9OP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH41ZF03 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1481

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 423  tccctgaaggcatactcaacagaaa 447
            ||||| |||||||||||||||||||
Sbjct: 1108 tccctcaaggcatactcaacagaaa 1084
to top
>emb|BX820396.1|CNS0A9MC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH29ZE08 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1538

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 423  tccctgaaggcatactcaacagaaa 447
            ||||| |||||||||||||||||||
Sbjct: 1118 tccctcaaggcatactcaacagaaa 1094
to top
>emb|BX323079.7| Zebrafish DNA sequence from clone DKEYP-113D7 in linkage group 19,
             complete sequence
          Length = 165200

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 611   tgggtcaaagttaattacaaa 631
             |||||||||||||||||||||
Sbjct: 66285 tgggtcaaagttaattacaaa 66265
to top
>gb|AE015924.1| Porphyromonas gingivalis W83, complete genome
          Length = 2343476

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 519     tgcacaaaagcaaagttcttc 539
               |||||||||||||||||||||
Sbjct: 1579606 tgcacaaaagcaaagttcttc 1579626
to top
>gb|AC103673.8| Mus musculus chromosome 1, clone RP24-336F10, complete sequence
          Length = 187158

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 348   gaactgtcatcctgccttcc 367
             ||||||||||||||||||||
Sbjct: 54198 gaactgtcatcctgccttcc 54217
to top
>ref|NM_190415.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1734

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 125  tggaggcggcctcactgcca 144
            ||||||||||||||||||||
Sbjct: 1008 tggaggcggcctcactgcca 989
to top
>gb|BT018810.1| Zea mays clone EL01N0530C10.d mRNA sequence
          Length = 1699

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 235  cacggacaggactcctgctcctgc 258
            ||||||| ||||||||||||||||
Sbjct: 1412 cacggactggactcctgctcctgc 1389
to top
>gb|AC129942.7| Mus musculus chromosome 8, clone RP23-267A22, complete sequence
          Length = 175030

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   accccttctgttgggagctg 192
             ||||||||||||||||||||
Sbjct: 51290 accccttctgttgggagctg 51271
to top
>ref|XM_606578.2| PREDICTED: Bos taurus similar to death effector filament-forming
            Ced-4-like apoptosis protein isoform 1 (LOC528166), mRNA
          Length = 3867

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 112  ctgaaacagcagatggaggc 131
            ||||||||||||||||||||
Sbjct: 1285 ctgaaacagcagatggaggc 1304
to top
>gb|AC132405.3| Mus musculus BAC clone RP23-332I1 from chromosome 3, complete sequence
          Length = 207726

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 245    actcctgctcctgccatatg 264
              ||||||||||||||||||||
Sbjct: 156202 actcctgctcctgccatatg 156183
to top
>gb|AC124475.3| Mus musculus BAC clone RP24-92F8 from chromosome 8, complete sequence
          Length = 212858

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 182   gttgggagctggggatcttg 201
             ||||||||||||||||||||
Sbjct: 88081 gttgggagctggggatcttg 88062
to top
>gb|AC158625.9| Mus musculus 6 BAC RP23-78J15 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 246705

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 526   aagcaaagttcttccttatc 545
             ||||||||||||||||||||
Sbjct: 41387 aagcaaagttcttccttatc 41406
to top
>ref|XM_850587.1| PREDICTED: Canis familiaris similar to PMS1 protein homolog 1 (DNA
            mismatch repair protein PMS1), transcript variant 2
            (LOC478840), mRNA
          Length = 2735

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 526  aagcaaagttcttccttatc 545
            ||||||||||||||||||||
Sbjct: 2054 aagcaaagttcttccttatc 2035
to top
>ref|XM_536002.2| PREDICTED: Canis familiaris similar to PMS1 protein homolog 1 (DNA
            mismatch repair protein PMS1), transcript variant 1
            (LOC478840), mRNA
          Length = 2852

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 526  aagcaaagttcttccttatc 545
            ||||||||||||||||||||
Sbjct: 2171 aagcaaagttcttccttatc 2152
to top
>gb|AC129013.3| Mus musculus BAC clone RP24-550P17 from chromosome 6, complete sequence
          Length = 169094

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 347   tgaactgtcatcctgccttccata 370
             |||||||||||| |||||||||||
Sbjct: 18951 tgaactgtcatcttgccttccata 18974
to top
>gb|AC160032.7| Mus musculus 6 BAC RP24-179I4 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 200439

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 347   tgaactgtcatcctgccttccata 370
             |||||||||||| |||||||||||
Sbjct: 97076 tgaactgtcatcttgccttccata 97053
to top
>ref|XM_504727.1| Yarrowia lipolytica CLIB122, YALI0E33377g predicted mRNA
          Length = 4095

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 361 gccttccataaccaccagca 380
           ||||||||||||||||||||
Sbjct: 561 gccttccataaccaccagca 580
to top
>emb|AL109830.11|HSJ977K12 Human DNA sequence from clone RP5-977K12 on chromosome 20 Contains
             ESTs, STSs and GSSs, complete sequence
          Length = 61772

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 100   ctaatgctagagctgaaacagcagatggaggc 131
             ||||||||||  |||||| |||||||||||||
Sbjct: 59279 ctaatgctaggactgaaagagcagatggaggc 59310
to top
>emb|AL009177.1|HS365E2 Human DNA sequence from clone RP3-365E2 on chromosome 6p22.3-24.1,
             complete sequence
          Length = 137730

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 591   tcactgactcttgtgttgat 610
             ||||||||||||||||||||
Sbjct: 38612 tcactgactcttgtgttgat 38593
to top
>emb|AJ843998.1| Plantago major mRNA for putative structural protein (psp1 gene)
          Length = 1087

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 351 ctgtcatcctgccttccataaccaccagcacc 382
           |||| |||||| ||| ||||||||||||||||
Sbjct: 260 ctgtgatcctggcttgcataaccaccagcacc 229
to top
>emb|AJ843266.1| Plantago major partial mRNA for vascular specific protein 5 (vp5
           gene)
          Length = 464

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 351 ctgtcatcctgccttccataaccaccagcacc 382
           |||| |||||| ||| ||||||||||||||||
Sbjct: 249 ctgtgatcctggcttgcataaccaccagcacc 218
to top
>gb|AC007716.8| Homo sapiens chromosome , clone RP11-94O8, complete sequence
          Length = 166759

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 497   ggcttcttcctgagtttcaa 516
             ||||||||||||||||||||
Sbjct: 37970 ggcttcttcctgagtttcaa 37951
to top
>gb|AC048334.21| Homo sapiens 3 BAC RP11-572C15 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 215719

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 416  actatcatccctgaaggcat 435
            ||||||||||||||||||||
Sbjct: 5248 actatcatccctgaaggcat 5229
to top
>emb|BX323460.10| Zebrafish DNA sequence from clone DKEYP-47G11 in linkage group 3,
              complete sequence
          Length = 202017

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 638    cttggtgggcttagtattca 657
              ||||||||||||||||||||
Sbjct: 145117 cttggtgggcttagtattca 145098
to top
>gb|AC155814.6| Mus musculus BAC clone RP24-137M22 from chromosome 8, complete sequence
          Length = 191336

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 173    accccttctgttgggagctg 192
              ||||||||||||||||||||
Sbjct: 149422 accccttctgttgggagctg 149403
to top
>gb|AC025767.6|AC025767 Homo sapiens chromosome 5 clone CTD-2087B2, complete sequence
          Length = 134545

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 100   ctaatgctagagctgaaacagcagatggaggc 131
             ||||||||||  |||||| |||||||||||||
Sbjct: 28037 ctaatgctaggactgaaagagcagatggaggc 28006
to top
>gb|AY634297.1| Caenorhabditis briggsae strain AF16 gpa-4 gene, complete cds
          Length = 1566

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 177 cttctgttgggagctgggga 196
           ||||||||||||||||||||
Sbjct: 153 cttctgttgggagctgggga 172
to top
>gb|AC044817.5|AC044817 Homo sapiens, clone RP11-197P20, complete sequence
          Length = 109398

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 615   tcaaagttaattacaaacag 634
             ||||||||||||||||||||
Sbjct: 60358 tcaaagttaattacaaacag 60339
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 125      tggaggcggcctcactgcca 144
                ||||||||||||||||||||
Sbjct: 35392500 tggaggcggcctcactgcca 35392519
to top
>gb|AC008177.3| Homo sapiens BAC clone RP11-527A7 from 2, complete sequence
          Length = 152996

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 583   gttcaagatcactgactctt 602
             ||||||||||||||||||||
Sbjct: 31865 gttcaagatcactgactctt 31884
to top
>gb|AC006440.9|AC006440 Homo sapiens chromosome 17, clone RP11-115N5, complete sequence
          Length = 169960

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 497   ggcttcttcctgagtttcaa 516
             ||||||||||||||||||||
Sbjct: 22145 ggcttcttcctgagtttcaa 22164
to top
>gb|AC091182.5| Homo sapiens chromosome 8, clone RP11-527N22, complete sequence
          Length = 206852

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 615    tcaaagttaattacaaacag 634
              ||||||||||||||||||||
Sbjct: 130987 tcaaagttaattacaaacag 131006
to top
>dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1088C09
          Length = 154084

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   tggaggcggcctcactgcca 144
             ||||||||||||||||||||
Sbjct: 16449 tggaggcggcctcactgcca 16468
to top
>dbj|AK120476.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111G20, full
           insert sequence
          Length = 2018

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 125 tggaggcggcctcactgcca 144
           ||||||||||||||||||||
Sbjct: 900 tggaggcggcctcactgcca 881
to top
>dbj|AK073922.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071C19, full
           insert sequence
          Length = 2011

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 125 tggaggcggcctcactgcca 144
           ||||||||||||||||||||
Sbjct: 896 tggaggcggcctcactgcca 877
to top
>gb|AC137151.3| Mus musculus BAC clone RP24-217N24 from 6, complete sequence
          Length = 177615

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 117    acagcagatggaggcggcct 136
              ||||||||||||||||||||
Sbjct: 125610 acagcagatggaggcggcct 125591
to top
>gb|AY103933.1| Zea mays PCO094535 mRNA sequence
          Length = 1426

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 235  cacggacaggactcctgctcctgc 258
            ||||||| ||||||||||||||||
Sbjct: 1404 cacggactggactcctgctcctgc 1381
to top
>dbj|AP006306.1| Homo sapiens genomic DNA, chromosome 8 clone:RP11-591J4, complete
             sequence
          Length = 211750

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 615   tcaaagttaattacaaacag 634
             ||||||||||||||||||||
Sbjct: 49869 tcaaagttaattacaaacag 49850
to top
>dbj|AP006304.1| Homo sapiens genomic DNA, chromosome 8 clone:RP11-53I21, complete
              sequence
          Length = 156583

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 615    tcaaagttaattacaaacag 634
              ||||||||||||||||||||
Sbjct: 101801 tcaaagttaattacaaacag 101782
to top
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    gagctgaaacagcagatgga 128
              ||||||||||||||||||||
Sbjct: 249862 gagctgaaacagcagatgga 249843
to top
>gb|AE000520.1| Treponema pallidum subsp. pallidum str. Nichols complete genome
          Length = 1138011

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 238    ggacaggactcctgctcctg 257
              ||||||||||||||||||||
Sbjct: 373264 ggacaggactcctgctcctg 373245
to top
>emb|AL928740.6| Zebrafish DNA sequence from clone CH211-129O13, complete sequence
          Length = 177281

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 638   cttggtgggcttagtattca 657
             ||||||||||||||||||||
Sbjct: 31929 cttggtgggcttagtattca 31948
to top
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 361     gccttccataaccaccagca 380
               ||||||||||||||||||||
Sbjct: 3956463 gccttccataaccaccagca 3956482
to top
>dbj|AP000070.1| Homo sapiens genomic DNA, chromosome 8p11.2, senescence gene region,
             section 6/19
          Length = 100000

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 615   tcaaagttaattacaaacag 634
             ||||||||||||||||||||
Sbjct: 59956 tcaaagttaattacaaacag 59975
to top
>dbj|AP005019.1| Homo sapiens genomic DNA, chromosome 11q clone:RP11-169D4, complete
             sequences
          Length = 98501

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 443   agaaatcaccctgtccagtaactt 466
             ||||||||||||||||||| ||||
Sbjct: 29733 agaaatcaccctgtccagtgactt 29756


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,364,566
Number of Sequences: 3902068
Number of extensions: 5364566
Number of successful extensions: 92814
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92538
Number of HSP's gapped (non-prelim): 272
length of query: 716
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 693
effective length of database: 17,143,297,704
effective search space: 11880305308872
effective search space used: 11880305308872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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