ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd24c03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 914 bits (461), Expect = 0.0 Identities = 545/574 (94%), Gaps = 4/574 (0%) Strand = Plus / Plus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 |||||||||||| | ||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 78142 tatagtcaaaaaagaagatctagaatatatccag-atgtgtgtgtatatttatctaaatt 78200 Query: 61 ctatatttatagataataatgtagtccttctaaaaaatatccttatttttactcttattg 120 ||||||||||||||||| ||| ||||||| ||||| ||||||||||| |||||||||| Sbjct: 78201 ctatatttatagataat---gtaatccttcttaaaaaaatccttattttgactcttattg 78257 Query: 121 aatcgcggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78258 aatcgcggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcct 78317 Query: 181 gtcttatttgttaatttataaacttaccaaataagacaannnnnnnggtttgttccgcca 240 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 78318 gtcttatttgttaatttataaacttaccaaataagacaatttttttggtttgttccgcca 78377 Query: 241 tcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78378 tcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctg 78437 Query: 301 tcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78438 tcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaa 78497 Query: 361 aatttctttccgagttaattttctcagttttattaacccgggcggctctttattattgct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78498 aatttctttccgagttaattttctcagttttattaacccgggcggctctttattattgct 78557 Query: 421 taaaatttgtagttcttctttcaagttacaatttttcattctctattagttttattatat 480 | ||||||||||||||| |||||||||| ||||||| ||||||||||| ||||||||||| Sbjct: 78558 ttaaatttgtagttcttgtttcaagttaaaatttttaattctctattatttttattatat 78617 Query: 481 tgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaattct 540 ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 78618 tgatgctttatcacattgccttttatgatgtaattcatagaccatacatagtggaatcct 78677 Query: 541 atatcttatttatttcctcttccttctttctatc 574 |||||||||||||||||||||||||||||||||| Sbjct: 78678 atatcttatttatttcctcttccttctttctatc 78711
>gb|DQ113928.1| Calamagrostis muiriana isolate B1 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 737 bits (372), Expect = 0.0 Identities = 512/558 (91%), Gaps = 5/558 (0%) Strand = Plus / Plus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatattt-atagataa 76 |||||||||||||| || ||||||||| ||||||||||||| |||||||| |||||| | Sbjct: 33 atctagaatatatctag-atgtgtgtgtctatttatctaaattctatattttatagatga 91 Query: 77 taatgtagtccttctaaaaaatatccttatttttactcttattgaatcgcggtaaagtat 136 | ||| ||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 92 t---gtaatccttaaaaaaaatatccttatttttactcttattgaataatggtaaagtat 148 Query: 137 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 196 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 tctaattcaaaaagtatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 208 Query: 197 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 256 ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 209 tataaccttaccaaataagacaatttttttggtttgttccgccatcccacccaatgaagt 268 Query: 257 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 316 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 attaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 328 Query: 317 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 376 ||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||| Sbjct: 329 tccttgaatggttaggtctgaattccacaatggagcttccaaaaaatttctttccgagtt 388 Query: 377 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 436 |||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||| Sbjct: 389 aattttctcagttttattaaccagggcggctctttattattgctttaaatttctagttct 448 Query: 437 tctttcaagttacaatttttcattctctattagttttattatattgatgctttttcacat 496 | ||||||||||| |||| | ||||||||||| |||||||||||||||||||| |||||| Sbjct: 449 tgtttcaagttacgatttctaattctctattatttttattatattgatgctttatcacat 508 Query: 497 tgccttttatgatgtaattcatagaccatacacagtggaattctatatcttatttatttc 556 ||| |||||||||| ||||||||||||||||| | |||||| |||||||||| ||| ||| Sbjct: 509 tgctttttatgatgcaattcatagaccatacatattggaatcctatatcttacttaattc 568 Query: 557 ctcttccttctttctatc 574 |||||||||||||||||| Sbjct: 569 ctcttccttctttctatc 586
>gb|DQ113934.1| Calamagrostis breweri isolate X17 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 722 bits (364), Expect = 0.0 Identities = 510/558 (91%), Gaps = 5/558 (0%) Strand = Plus / Plus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatattt-atagataa 76 |||||||||||||| || ||||||||| ||||||||||||| |||||||| || ||| | Sbjct: 33 atctagaatatatctag-atgtgtgtgtctatttatctaaattctatattttatggatga 91 Query: 77 taatgtagtccttctaaaaaatatccttatttttactcttattgaatcgcggtaaagtat 136 | ||| ||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 92 t---gtaatccttaaaaaaaatatccttatttttactcttattgaataatggtaaagtat 148 Query: 137 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 196 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 tctaattcaaaaagtatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 208 Query: 197 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 256 ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 209 tataaccttaccaaataagacaatttttttggtttgttccgccatcccacccaatgaagt 268 Query: 257 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 316 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 attaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 328 Query: 317 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 376 ||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||| Sbjct: 329 tccttgaatggttaggtctgaattccacaatggagcttccaaaaaatttctttccgagtt 388 Query: 377 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 436 |||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||| Sbjct: 389 aattttctcagttttattaaccagggcggctctttattattgctttaaatttctagttct 448 Query: 437 tctttcaagttacaatttttcattctctattagttttattatattgatgctttttcacat 496 | |||||||||| |||| | ||||||||||| |||||||||||||||||||| |||||| Sbjct: 449 tgtttcaagttatgatttctaattctctattatttttattatattgatgctttatcacat 508 Query: 497 tgccttttatgatgtaattcatagaccatacacagtggaattctatatcttatttatttc 556 ||| |||||||||| ||||||||||||||||| | |||||| |||||||||| ||| ||| Sbjct: 509 tgctttttatgatgcaattcatagaccatacatattggaatcctatatcttacttaattc 568 Query: 557 ctcttccttctttctatc 574 |||||||||||||||||| Sbjct: 569 ctcttccttctttctatc 586
>gb|DQ113933.1| Calamagrostis breweri isolate RMP0198 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 722 bits (364), Expect = 0.0 Identities = 510/558 (91%), Gaps = 5/558 (0%) Strand = Plus / Plus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatattt-atagataa 76 |||||||||||||| || ||||||||| ||||||||||||| |||||||| || ||| | Sbjct: 33 atctagaatatatctag-atgtgtgtgtctatttatctaaattctatattttatggatga 91 Query: 77 taatgtagtccttctaaaaaatatccttatttttactcttattgaatcgcggtaaagtat 136 | ||| ||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 92 t---gtaatccttaaaaaaaatatccttatttttactcttattgaataatggtaaagtat 148 Query: 137 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 196 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 tctaattcaaaaagtatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 208 Query: 197 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 256 ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 209 tataaccttaccaaataagacaatttttttggtttgttccgccatcccacccaatgaagt 268 Query: 257 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 316 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 attaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 328 Query: 317 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 376 ||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||| Sbjct: 329 tccttgaatggttaggtctgaattccacaatggagcttccaaaaaatttctttccgagtt 388 Query: 377 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 436 |||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||| Sbjct: 389 aattttctcagttttattaaccagggcggctctttattattgctttaaatttctagttct 448 Query: 437 tctttcaagttacaatttttcattctctattagttttattatattgatgctttttcacat 496 | |||||||||| |||| | ||||||||||| |||||||||||||||||||| |||||| Sbjct: 449 tgtttcaagttatgatttctaattctctattatttttattatattgatgctttatcacat 508 Query: 497 tgccttttatgatgtaattcatagaccatacacagtggaattctatatcttatttatttc 556 ||| |||||||||| ||||||||||||||||| | |||||| |||||||||| ||| ||| Sbjct: 509 tgctttttatgatgcaattcatagaccatacatattggaatcctatatcttacttaattc 568 Query: 557 ctcttccttctttctatc 574 |||||||||||||||||| Sbjct: 569 ctcttccttctttctatc 586
>gb|DQ113932.1| Calamagrostis breweri isolate BW8259 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 722 bits (364), Expect = 0.0 Identities = 510/558 (91%), Gaps = 5/558 (0%) Strand = Plus / Plus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatattt-atagataa 76 |||||||||||||| || ||||||||| ||||||||||||| |||||||| || ||| | Sbjct: 33 atctagaatatatctag-atgtgtgtgtctatttatctaaattctatattttatggatga 91 Query: 77 taatgtagtccttctaaaaaatatccttatttttactcttattgaatcgcggtaaagtat 136 | ||| ||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 92 t---gtaatccttaaaaaaaatatccttatttttactcttattgaataatggtaaagtat 148 Query: 137 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 196 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 tctaattcaaaaagtatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 208 Query: 197 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 256 ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 209 tataaccttaccaaataagacaatttttttggtttgttccgccatcccacccaatgaagt 268 Query: 257 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 316 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 attaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 328 Query: 317 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 376 ||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||| Sbjct: 329 tccttgaatggttaggtctgaattccacaatggagcttccaaaaaatttctttccgagtt 388 Query: 377 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 436 |||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||| Sbjct: 389 aattttctcagttttattaaccagggcggctctttattattgctttaaatttctagttct 448 Query: 437 tctttcaagttacaatttttcattctctattagttttattatattgatgctttttcacat 496 | |||||||||| |||| | ||||||||||| |||||||||||||||||||| |||||| Sbjct: 449 tgtttcaagttatgatttctaattctctattatttttattatattgatgctttatcacat 508 Query: 497 tgccttttatgatgtaattcatagaccatacacagtggaattctatatcttatttatttc 556 ||| |||||||||| ||||||||||||||||| | |||||| |||||||||| ||| ||| Sbjct: 509 tgctttttatgatgcaattcatagaccatacatattggaatcctatatcttacttaattc 568 Query: 557 ctcttccttctttctatc 574 |||||||||||||||||| Sbjct: 569 ctcttccttctttctatc 586
>gb|DQ113931.1| Calamagrostis breweri isolate RMP0007 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 722 bits (364), Expect = 0.0 Identities = 510/558 (91%), Gaps = 5/558 (0%) Strand = Plus / Plus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatattt-atagataa 76 |||||||||||||| || ||||||||| ||||||||||||| |||||||| || ||| | Sbjct: 33 atctagaatatatctag-atgtgtgtgtctatttatctaaattctatattttatggatga 91 Query: 77 taatgtagtccttctaaaaaatatccttatttttactcttattgaatcgcggtaaagtat 136 | ||| ||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 92 t---gtaatccttaaaaaaaatatccttatttttactcttattgaataatggtaaagtat 148 Query: 137 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 196 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 tctaattcaaaaagtatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 208 Query: 197 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 256 ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 209 tataaccttaccaaataagacaatttttttggtttgttccgccatcccacccaatgaagt 268 Query: 257 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 316 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 attaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 328 Query: 317 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 376 ||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||| Sbjct: 329 tccttgaatggttaggtctgaattccacaatggagcttccaaaaaatttctttccgagtt 388 Query: 377 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 436 |||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||| Sbjct: 389 aattttctcagttttattaaccagggcggctctttattattgctttaaatttctagttct 448 Query: 437 tctttcaagttacaatttttcattctctattagttttattatattgatgctttttcacat 496 | |||||||||| |||| | ||||||||||| |||||||||||||||||||| |||||| Sbjct: 449 tgtttcaagttatgatttctaattctctattatttttattatattgatgctttatcacat 508 Query: 497 tgccttttatgatgtaattcatagaccatacacagtggaattctatatcttatttatttc 556 ||| |||||||||| ||||||||||||||||| | |||||| |||||||||| ||| ||| Sbjct: 509 tgctttttatgatgcaattcatagaccatacatattggaatcctatatcttacttaattc 568 Query: 557 ctcttccttctttctatc 574 |||||||||||||||||| Sbjct: 569 ctcttccttctttctatc 586
>gb|DQ113930.1| Calamagrostis muiriana isolate B4 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 722 bits (364), Expect = 0.0 Identities = 510/558 (91%), Gaps = 5/558 (0%) Strand = Plus / Plus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatattt-atagataa 76 |||||||||||||| || ||||||||| ||||||||||||| |||||||| || ||| | Sbjct: 33 atctagaatatatctag-atgtgtgtgtctatttatctaaattctatattttatggatga 91 Query: 77 taatgtagtccttctaaaaaatatccttatttttactcttattgaatcgcggtaaagtat 136 | ||| ||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 92 t---gtaatccttaaaaaaaatatccttatttttactcttattgaataatggtaaagtat 148 Query: 137 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 196 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 tctaattcaaaaagtatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 208 Query: 197 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 256 ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 209 tataaccttaccaaataagacaatttttttggtttgttccgccatcccacccaatgaagt 268 Query: 257 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 316 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 attaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 328 Query: 317 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 376 ||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||| Sbjct: 329 tccttgaatggttaggtctgaattccacaatggagcttccaaaaaatttctttccgagtt 388 Query: 377 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 436 |||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||| Sbjct: 389 aattttctcagttttattaaccagggcggctctttattattgctttaaatttctagttct 448 Query: 437 tctttcaagttacaatttttcattctctattagttttattatattgatgctttttcacat 496 | |||||||||| |||| | ||||||||||| |||||||||||||||||||| |||||| Sbjct: 449 tgtttcaagttatgatttctaattctctattatttttattatattgatgctttatcacat 508 Query: 497 tgccttttatgatgtaattcatagaccatacacagtggaattctatatcttatttatttc 556 ||| |||||||||| ||||||||||||||||| | |||||| |||||||||| ||| ||| Sbjct: 509 tgctttttatgatgcaattcatagaccatacatattggaatcctatatcttacttaattc 568 Query: 557 ctcttccttctttctatc 574 |||||||||||||||||| Sbjct: 569 ctcttccttctttctatc 586
>gb|DQ113929.1| Calamagrostis muiriana isolate B3 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 722 bits (364), Expect = 0.0 Identities = 510/558 (91%), Gaps = 5/558 (0%) Strand = Plus / Plus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatattt-atagataa 76 |||||||||||||| || ||||||||| ||||||||||||| |||||||| || ||| | Sbjct: 33 atctagaatatatctag-atgtgtgtgtctatttatctaaattctatattttatggatga 91 Query: 77 taatgtagtccttctaaaaaatatccttatttttactcttattgaatcgcggtaaagtat 136 | ||| ||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 92 t---gtaatccttaaaaaaaatatccttatttttactcttattgaataatggtaaagtat 148 Query: 137 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 196 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 tctaattcaaaaagtatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 208 Query: 197 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 256 ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 209 tataaccttaccaaataagacaatttttttggtttgttccgccatcccacccaatgaagt 268 Query: 257 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 316 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 attaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 328 Query: 317 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 376 ||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||| Sbjct: 329 tccttgaatggttaggtctgaattccacaatggagcttccaaaaaatttctttccgagtt 388 Query: 377 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 436 |||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||| Sbjct: 389 aattttctcagttttattaaccagggcggctctttattattgctttaaatttctagttct 448 Query: 437 tctttcaagttacaatttttcattctctattagttttattatattgatgctttttcacat 496 | |||||||||| |||| | ||||||||||| |||||||||||||||||||| |||||| Sbjct: 449 tgtttcaagttatgatttctaattctctattatttttattatattgatgctttatcacat 508 Query: 497 tgccttttatgatgtaattcatagaccatacacagtggaattctatatcttatttatttc 556 ||| |||||||||| ||||||||||||||||| | |||||| |||||||||| ||| ||| Sbjct: 509 tgctttttatgatgcaattcatagaccatacatattggaatcctatatcttacttaattc 568 Query: 557 ctcttccttctttctatc 574 |||||||||||||||||| Sbjct: 569 ctcttccttctttctatc 586
>gb|DQ113927.1| Calamagrostis muiriana isolate A7 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 722 bits (364), Expect = 0.0 Identities = 510/558 (91%), Gaps = 5/558 (0%) Strand = Plus / Plus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatattt-atagataa 76 |||||||||||||| || ||||||||| ||||||||||||| |||||||| || ||| | Sbjct: 33 atctagaatatatctag-atgtgtgtgtctatttatctaaattctatattttatggatga 91 Query: 77 taatgtagtccttctaaaaaatatccttatttttactcttattgaatcgcggtaaagtat 136 | ||| ||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 92 t---gtaatccttaaaaaaaatatccttatttttactcttattgaataaaggtaaagtat 148 Query: 137 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 196 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 tctaattcaaaaagtatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 208 Query: 197 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 256 ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 209 tataaccttaccaaataagacaatttttttggtttgttccgccatcccacccaatgaagt 268 Query: 257 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 316 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 attaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 328 Query: 317 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 376 ||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||| Sbjct: 329 tccttgaatggttaggtctgaattccacaatggagcttccaaaaaatttctttccgagtt 388 Query: 377 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 436 |||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||| Sbjct: 389 aattttctcagttttattaaccagggcggctctttattattgctttaaatttctagttct 448 Query: 437 tctttcaagttacaatttttcattctctattagttttattatattgatgctttttcacat 496 | |||||||||| |||| | ||||||||||| |||||||||||||||||||| |||||| Sbjct: 449 tgtttcaagttatgatttctaattctctattatttttattatattgatgctttatcacat 508 Query: 497 tgccttttatgatgtaattcatagaccatacacagtggaattctatatcttatttatttc 556 ||| |||||||||| ||||||||||||||||| | |||||| |||||||||| ||| ||| Sbjct: 509 tgctttttatgatgcaattcatagaccatacatattggaatcctatatcttacttaattc 568 Query: 557 ctcttccttctttctatc 574 |||||||||||||||||| Sbjct: 569 ctcttccttctttctatc 586
>gb|DQ113926.1| Calamagrostis muiriana isolate A1 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 722 bits (364), Expect = 0.0 Identities = 510/558 (91%), Gaps = 5/558 (0%) Strand = Plus / Plus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatattt-atagataa 76 |||||||||||||| || ||||||||| ||||||||||||| |||||||| || ||| | Sbjct: 33 atctagaatatatctag-atgtgtgtgtctatttatctaaattctatattttatggatga 91 Query: 77 taatgtagtccttctaaaaaatatccttatttttactcttattgaatcgcggtaaagtat 136 | ||| ||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 92 t---gtaatccttaaaaaaaatatccttatttttactcttattgaataaaggtaaagtat 148 Query: 137 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 196 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 tctaattcaaaaagtatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 208 Query: 197 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 256 ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 209 tataaccttaccaaataagacaatttttttggtttgttccgccatcccacccaatgaagt 268 Query: 257 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 316 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 attaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 328 Query: 317 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 376 ||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||| Sbjct: 329 tccttgaatggttaggtctgaattccacaatggagcttccaaaaaatttctttccgagtt 388 Query: 377 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 436 |||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||| Sbjct: 389 aattttctcagttttattaaccagggcggctctttattattgctttaaatttctagttct 448 Query: 437 tctttcaagttacaatttttcattctctattagttttattatattgatgctttttcacat 496 | |||||||||| |||| | ||||||||||| |||||||||||||||||||| |||||| Sbjct: 449 tgtttcaagttatgatttctaattctctattatttttattatattgatgctttatcacat 508 Query: 497 tgccttttatgatgtaattcatagaccatacacagtggaattctatatcttatttatttc 556 ||| |||||||||| ||||||||||||||||| | |||||| |||||||||| ||| ||| Sbjct: 509 tgctttttatgatgcaattcatagaccatacatattggaatcctatatcttacttaattc 568 Query: 557 ctcttccttctttctatc 574 |||||||||||||||||| Sbjct: 569 ctcttccttctttctatc 586
>gb|AY847072.1| Melica altissima ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1139 Score = 670 bits (338), Expect = 0.0 Identities = 506/559 (90%), Gaps = 8/559 (1%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 ||||||||||||||||| |||||| || |||||||||| || |||| |||||||||||| Sbjct: 777 atctagaatatatccag-atgtgtatgtctatttatctatattctat-tttatagataat 720 Query: 78 aatgtagtccttctaaaaaatatcc--ttatttttactcttattgaatcgcggtaaagta 135 ||| ||||||| ||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 719 ---gtaatccttcttaaaaaaatctatttatttttactcttattgaatcgcggtaaagta 663 Query: 136 ttctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaat 195 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 662 ttctaattcaataagtatttcgcgggcgaatatttactctttcctgtcttatttgttaat 603 Query: 196 ttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaag 255 |||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 602 ttataatcttaccaaataagacaatttttttggtttgttccgccatcccacccaatgaag 543 Query: 256 tgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgctt 315 | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 542 tattaggattcttttcaataaaatcctatggagtcataggttctgtcgttcccactgctt 483 Query: 316 ctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagt 375 |||| |||||||||||||||||||||||||| ||||||||| ||||| | ||||||||| Sbjct: 482 ctccctgaatggttaggtctgaatcccgcaatggagcttccttaaaatgtttttccgagt 423 Query: 376 taattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttc 435 ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||| Sbjct: 422 taattttctcagttttattaaccgcggcggctctttattattgctttaaatttgtacttc 363 Query: 436 ttctttcaagttacaatttttcattctctattagttttattatattgatgctttttcaca 495 || ||| ||||||| |||| ||||||| ||| |||||||||||||||||||| ||||| Sbjct: 362 ttattttaagttacgatttcgaattctctcttatttttattatattgatgctttatcaca 303 Query: 496 ttgccttttatgatgtaattcatagaccatacacagtggaattctatatcttatttattt 555 ||||||||||||||| ||||||||||||||||| | ||||| ||||||||||| || ||| Sbjct: 302 ttgccttttatgatgcaattcatagaccatacatattggaactctatatcttactt-ttt 244 Query: 556 cctcttccttctttctatc 574 |||||||||||||||||| Sbjct: 243 tctcttccttctttctatc 225
>gb|AY847115.1| Streptogyna americana ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1160 Score = 666 bits (336), Expect = 0.0 Identities = 507/562 (90%), Gaps = 11/562 (1%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||||| || |||| |||||||||||| Sbjct: 815 atctagaatatatctag-atgtgtgtgtttatttatctatattctat-tttatagataat 758 Query: 78 aatgtagtccttct-----aaaaaatatccttatttttactcttattgaatcgcggtaaa 132 ||| || |||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 757 ---gtaatctttcttaaaaaaaaaatctccttatttttactcttattgaatcgcggtaaa 701 Query: 133 gtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtt 192 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 700 gtattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtt 641 Query: 193 aatttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatg 252 |||| |||| ||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 640 aattcataaccttaccaaataaggcaatttttttggtttgttccgccatcccacccaatg 581 Query: 253 aagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactg 312 |||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 580 aagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgttcccactg 521 Query: 313 cttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccg 372 ||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct: 520 cttctcctttaatggttaggtttgaatcccgcaatggagcttccaaaaaatttctttccg 461 Query: 373 agttaattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtag 432 ||| |||||| |||||||||||||||||||| |||||||||||||||||||||||| || Sbjct: 460 agtcaattttatcagttttattaacccgggccgctctttattattgcttaaaatttttat 401 Query: 433 ttcttctttcaagttacaatttttcattctctattagttttattatattgatgctttttc 492 ||||| ||||||||||| |||| ||||||| ||| |||||||||||||||||||| || Sbjct: 400 ttcttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctttatc 341 Query: 493 acattgccttttatgatgtaattcatagaccatacacagtggaattctatatcttattta 552 |||||||||||||||||||||||||||||||||||| | |||||| ||||||||| ||| Sbjct: 340 acattgccttttatgatgtaattcatagaccatacatattggaatcctatatctttctta 281 Query: 553 tttcctcttccttctttctatc 574 ||||||||||||||||||||| Sbjct: 280 -ttcctcttccttctttctatc 260
>gb|AY847071.1| Glyceria striata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1142 Score = 660 bits (333), Expect = 0.0 Identities = 459/501 (91%), Gaps = 3/501 (0%) Strand = Plus / Minus Query: 76 ataatgtagtccttct--aaaaaatatccttatttttactcttattgaatcgcggtaaag 133 |||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 725 ataatgtaatccttcttaaaaaaatatctttatttttactcttattgaatcgcggtaaag 666 Query: 134 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 193 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 665 tattctaattcaataagtatttcgcgggcgaatatttactctttcctgtcttatttgtta 606 Query: 194 atttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatga 253 |||||||| |||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 605 atttataagcttaccaaataagagaatttttttggtttgttccgccatcccacccaatga 546 Query: 254 agtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgc 313 ||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct: 545 agtattaggattctttttaataaaatcctatggagtcataggttctgtcgttcccactgc 486 Query: 314 ttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccga 373 |||||| |||||||||||||||||||||||||| ||||||||| |||||| | ||||||| Sbjct: 485 ttctccctgaatggttaggtctgaatcccgcaatggagcttcctaaaaatatgtttccga 426 Query: 374 gttaattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagt 433 ||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||| Sbjct: 425 gttaattttctcagttttactaactgcggcggctctttattattgctttgaatttgtagt 366 Query: 434 tcttctttcaagttacaatttttcattctctattagttttattatattgatgctttttca 493 |||| ||| ||||||| |||| ||||||| ||| |||||||||||||||||||| ||| Sbjct: 365 tcttattttaagttacgatttcgaattctctcttatttttattatattgatgctttatca 306 Query: 494 cattgccttttatgatgtaattcatagaccatacacagtggaattctatatcttatttat 553 ||||||||||||||||| ||||||||||||||||| | ||||||||||||||||| |||| Sbjct: 305 cattgccttttatgatgcaattcatagaccatacatattggaattctatatcttacttat 246 Query: 554 ttcctcttccttctttctatc 574 || |||||||||||||||||| Sbjct: 245 tt-ctcttccttctttctatc 226
>gb|AY847092.1| Arundoclaytonia dissimilis ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1053 Score = 646 bits (326), Expect = 0.0 Identities = 504/561 (89%), Gaps = 10/561 (1%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||||| || |||| |||||| ||| Sbjct: 711 atctagaatatatctag-atgtgtgtgtctatttatctatattctat-tttata---aat 657 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 133 |||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 656 aatgtaatccttcttttaaaaaaatctccttatttttactcttattgaatcgcggtaaag 597 Query: 134 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 193 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 596 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 537 Query: 194 atttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatga 253 |||| ||| ||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 536 atttgtaaccttaccaaataaggcaatttttttggtttgttccgccatcccacccaatga 477 Query: 254 agtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgc 313 ||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||| | Sbjct: 476 agtattaggattcttttcaataaaatcctatccattcataggttctgtcgttcccactac 417 Query: 314 ttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccga 373 |||||||| ||||||||||||||||| || ||| |||||||||||||||||||||||||| Sbjct: 416 ttctcctttaatggttaggtctgaattccacaatggagcttccaaaaaatttctttccga 357 Query: 374 gttaattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagt 433 || ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| | Sbjct: 356 gtcaattttctcagttttcttaacccgggccgctctttattattgcttaaaatttgtatt 297 Query: 434 tcttctttcaagttacaatttttcattctctattagttttattatattgatgctttttca 493 |||| |||| |||||| |||| ||||||| ||| |||||||||||||||||||| ||| Sbjct: 296 tcttgtttcgagttacgatttcgaattctctgttatttttattatattgatgctttatca 237 Query: 494 cattgccttttatgatgtaattcatagaccatacacagtggaattctatatcttatttat 553 ||||||||||||||||||||||||||||||||||| | |||||| ||||||||| ||| Sbjct: 236 cattgccttttatgatgtaattcatagaccatacatattggaatcctatatctttctta- 178 Query: 554 ttcctcttccttctttctatc 574 ||||||||| ||||||||||| Sbjct: 177 ttcctcttctttctttctatc 157
>gb|AY912189.1| Arthrostylidium ecuadorense ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1224 Score = 640 bits (323), Expect = e-180 Identities = 506/566 (89%), Gaps = 14/566 (2%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||||| || ||||||||||| ||| Sbjct: 838 atctagaatatatctag-atgtgtgtgtctatttatctatattctatatttata---aat 783 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 133 |||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 782 aatgtaatccttcttttaaaaaaatctccttatttttactcttattgaatcgcggtaaag 723 Query: 134 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 193 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 663 Query: 194 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 248 ||||||| | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 662 atttatattataaccttaccaaataaggcaatttttttggtttgttccgccatcccaccc 603 Query: 249 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 308 |||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 602 aatgaagtattaggattcttttcaataaaatcctatccattcataggttctgtcgttccc 543 Query: 309 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 368 ||| ||||||||| ||||||||||||||||| || ||| ||||||||||||||||||||| Sbjct: 542 actacttctcctttaatggttaggtctgaattccacaatggagcttccaaaaaatttctt 483 Query: 369 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 428 ||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 482 tccgagtcaattttctcagttttcttaacccgggccgctctttattattgcttaaaattt 423 Query: 429 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 488 ||| ||||| |||| |||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 422 gtatttcttgtttcgagttacgatttcgaattctctgttatttttattatattgatgctt 363 Query: 489 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 548 | |||||||||||||||||||||||||||||||||||||| | |||||| ||||||||| Sbjct: 362 tatcacattgccttttatgatgtaattcatagaccatacatattggaatcctatatcttt 303 Query: 549 tttatttcctcttccttctttctatc 574 ||| ||||||||| ||||||||||| Sbjct: 302 ctta-ttcctcttctttctttctatc 278
>gb|AY912212.1| Sirochloa parvifolia ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1217 Score = 632 bits (319), Expect = e-178 Identities = 505/566 (89%), Gaps = 14/566 (2%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||||| || ||||||||||||||||| Sbjct: 831 atctagaatatatctag-atgtgtgtgtctatttatctatattctatatttatagataat 773 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 133 ||| || |||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 772 ---gtaatctttcttaacaaaaaatctccttatttttactcttattgaatcgcggtaaag 716 Query: 134 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 193 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 715 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 656 Query: 194 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 248 ||||||| | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 655 atttatattataaccttaccaaataaggcaattattttggtttgttccgccatcccaccc 596 Query: 249 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 308 |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 595 aatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgttccc 536 Query: 309 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 368 ||| ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 535 actacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaaatttctt 476 Query: 369 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 428 ||||||| ||||||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 475 tccgagtcaattttctcagttttattaacccgggccgctctttattattgttttaaattt 416 Query: 429 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 488 ||| ||||| ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 415 gtatttcttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 356 Query: 489 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 548 | ||||||||| ||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 355 tatcacattgctttttatgatgtaactcatagaccatacatattggaatcctatatcttt 296 Query: 549 tttatttcctcttccttctttctatc 574 ||| ||||||||| ||||||||||| Sbjct: 295 ctta-ttcctcttctttctttctatc 271
>gb|AY912199.1| Cephalostachyum pergracile ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1226 Score = 632 bits (319), Expect = e-178 Identities = 505/566 (89%), Gaps = 14/566 (2%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||||| || ||||||||||||||||| Sbjct: 840 atctagaatatatctag-atgtgtgtgtctatttatctatattctatatttatagataat 782 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 133 ||| || |||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 781 ---gtaatctttcttaacaaaaaatctccttatttttactcttattgaatcgcggtaaag 725 Query: 134 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 193 |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 724 tattttaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 665 Query: 194 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 248 ||||||| | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 664 atttatattataaccttaccaaataaggcaatttttttggtttgttccgccatcccaccc 605 Query: 249 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 308 |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 604 aatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgttccc 545 Query: 309 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 368 ||| ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 544 actacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaaatttctt 485 Query: 369 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 428 ||||||| ||||||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 484 tccgagtcaattttctcagttttattaacccgggccgctctttattattgttttaaattt 425 Query: 429 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 488 ||| ||||| ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 424 gtatttcttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 365 Query: 489 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 548 | ||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 364 tatcacattgccttttatgatgtaactcatagaccatacatattggaatcctatatcttt 305 Query: 549 tttatttcctcttccttctttctatc 574 ||| ||||||||| ||||||||||| Sbjct: 304 ctta-ttcctcttctttctttctatc 280
>gb|AY912193.1| Oxytenanthera abyssinica ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1222 Score = 632 bits (319), Expect = e-178 Identities = 505/566 (89%), Gaps = 14/566 (2%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||||| || |||||||||| |||||| Sbjct: 836 atctagaatatatctag-atgtgtgtgtctatttatctatattctatatttatggataat 778 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 133 ||| || |||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 777 ---gtaatctttcttaacaaaaaatctccttatttttactcttattgaatcgcggtaaag 721 Query: 134 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 193 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 720 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 661 Query: 194 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 248 ||||||| | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 660 atttatattataaccttaccaaataaggcaatttttttggtttgttccgccatcccaccc 601 Query: 249 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 308 |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 600 aatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgttccc 541 Query: 309 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 368 ||| ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 540 actacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaaatttctt 481 Query: 369 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 428 ||||||| ||||||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 480 tccgagtcaattttctcagttttattaacccgggccgctctttattattgttttaaattt 421 Query: 429 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 488 ||| ||||| ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 420 gtatttcttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 361 Query: 489 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 548 | ||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 360 tatcacattgccttttatgatgtaactcatagaccatacatattggaatcctatatcttt 301 Query: 549 tttatttcctcttccttctttctatc 574 ||| ||||||||| ||||||||||| Sbjct: 300 ctta-ttcctcttctttctttctatc 276
>gb|AY912192.1| Bambusa vulgaris ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1227 Score = 632 bits (319), Expect = e-178 Identities = 505/566 (89%), Gaps = 14/566 (2%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||||| || |||||||||| |||||| Sbjct: 841 atctagaatatatctag-atgtgtgtgtctatttatctatattctatatttatggataat 783 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 133 ||| || |||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 782 ---gtaatctttcttaacaaaaaatctccttatttttactcttattgaatcgcggtaaag 726 Query: 134 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 193 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 725 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 666 Query: 194 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 248 ||||||| | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 665 atttatattataaccttaccaaataaggcaatttttttggtttgttccgccatcccaccc 606 Query: 249 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 308 |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 605 aatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgttccc 546 Query: 309 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 368 ||| ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 545 actacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaaatttctt 486 Query: 369 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 428 ||||||| ||||||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 485 tccgagtcaattttctcagttttattaacccgggccgctctttattattgttttaaattt 426 Query: 429 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 488 ||| ||||| ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 425 gtatttcttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 366 Query: 489 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 548 | ||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 365 tatcacattgccttttatgatgtaactcatagaccatacatattggaatcctatatcttt 306 Query: 549 tttatttcctcttccttctttctatc 574 ||| ||||||||| ||||||||||| Sbjct: 305 ctta-ttcctcttctttctttctatc 281
>gb|AY912213.1| Valiha diffusa ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1163 Score = 624 bits (315), Expect = e-176 Identities = 504/566 (89%), Gaps = 14/566 (2%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||| | || ||||||||||||||||| Sbjct: 830 atctagaatatatctag-atgtgtgtgtctatttatccatattctatatttatagataat 772 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 133 ||| || |||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 771 ---gtaatctttcttaacaaaaaatctccttatttttactcttattgaatcgcggtaaag 715 Query: 134 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 193 |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 714 tattctaattcaataaagatttcgcgggcgaatattaactctttcctgtcttatttgtta 655 Query: 194 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 248 ||||||| | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 654 atttatattataaccttaccaaataaggcaattattttggtttgttccgccatcccaccc 595 Query: 249 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 308 |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 594 aatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgttccc 535 Query: 309 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 368 ||| ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 534 actacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaaatttctt 475 Query: 369 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 428 ||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 474 tccgagtcaattttctcagttttattaacccgggccgctctttattattgtttaaaattt 415 Query: 429 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 488 ||| ||||| ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 414 gtatttcttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 355 Query: 489 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 548 | ||||||||| ||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 354 tatcacattgctttttatgatgtaactcatagaccatacatattggaatcctatatcttt 295 Query: 549 tttatttcctcttccttctttctatc 574 ||| ||||||||| ||||||||||| Sbjct: 294 ctta-ttcctcttctttctttctatc 270
>gb|AY912202.1| Cathariostachys madagascariensis ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1085 Score = 624 bits (315), Expect = e-176 Identities = 504/566 (89%), Gaps = 14/566 (2%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||||| || ||||||||||||||||| Sbjct: 831 atctagaatatatctag-atgtgtgtgtctatttatctatattctatatttatagataat 773 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 133 ||| || |||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 772 ---gtaatctttcttaacaaaaaatctccttatttttactcttattgaatcgcggtaaag 716 Query: 134 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 193 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 715 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 656 Query: 194 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 248 ||||||| | |||| |||||||| ||| |||||||||||||||||||||| Sbjct: 655 atttatattataaccttatcaaataaggcaattattttggtttgttccgccatcccaccc 596 Query: 249 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 308 |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 595 aatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgttccc 536 Query: 309 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 368 ||| ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 535 actacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaaatttctt 476 Query: 369 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 428 ||||||| ||||||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 475 tccgagtcaattttctcagttttattaacccgggccgctctttattattgttttaaattt 416 Query: 429 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 488 ||| ||||| ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 415 gtatttcttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 356 Query: 489 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 548 | ||||||||| ||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 355 tatcacattgctttttatgatgtaactcatagaccatacatattggaatcctatatcttt 296 Query: 549 tttatttcctcttccttctttctatc 574 ||| ||||||||| ||||||||||| Sbjct: 295 ctta-ttcctcttctttctttctatc 271
>gb|AY912216.1| Streptogyna americana ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1172 Score = 622 bits (314), Expect = e-175 Identities = 508/572 (88%), Gaps = 20/572 (3%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||||| || ||||||||||||||| Sbjct: 827 atctagaatatatctag-atgtgtgtgtttatttatctatattctatatttatagata-- 771 Query: 78 aatgtagtccttct-----aaaaaatatccttattttta-----ctctt-----attgaa 122 ||||| || |||| ||||||| |||||||||||| ||||| |||||| Sbjct: 770 -atgtaatctttcttaaaaaaaaaatctccttatttttattttactcttattgaattgaa 712 Query: 123 tcgcggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgt 182 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 711 tcgcggtaaagtattctaattcaataaagatttcgcgggcgaatatttactctttcctgt 652 Query: 183 cttatttgttaatttataaacttaccaaataagacaannnnnnnggtttgttccgccatc 242 |||||||||||||| |||| ||||||||||||| ||| |||||||||||||||| Sbjct: 651 cttatttgttaattcataaccttaccaaataaggcaatttttttggtttgttccgccatc 592 Query: 243 ccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtc 302 |||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 591 ccacccaatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtc 532 Query: 303 gttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaa 362 ||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||| Sbjct: 531 gttcccactgcttctcctttaatggttaggtttgaatcccgcaatggagcttccaaaaaa 472 Query: 363 tttctttccgagttaattttctcagttttattaacccgggcggctctttattattgctta 422 ||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 471 tttctttccgagtcaattttatcagttttattaacccgggccgctctttattattgctta 412 Query: 423 aaatttgtagttcttctttcaagttacaatttttcattctctattagttttattatattg 482 |||||| || ||||| ||||||||||| |||| ||||||| ||| ||||||||||||| Sbjct: 411 aaatttttatttcttgtttcaagttacgatttcgaattctctgttatttttattatattg 352 Query: 483 atgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaattctat 542 ||||||| |||||||||||||||||||||||||||||||||||||| | |||||| |||| Sbjct: 351 atgctttatcacattgccttttatgatgtaattcatagaccatacatattggaatcctat 292 Query: 543 atcttatttatttcctcttccttctttctatc 574 ||||| ||| ||||||||||||||||||||| Sbjct: 291 atctttctta-ttcctcttccttctttctatc 261
>gb|AF133461.1|AF133461 Buergersiochloa bambusoides ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1216 Score = 618 bits (312), Expect = e-174 Identities = 497/554 (89%), Gaps = 8/554 (1%) Strand = Plus / Minus Query: 22 agaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataataatg 81 |||||||||| || ||||||||| |||||||||| || |||||||||||||| |||| Sbjct: 842 agaatatatctag-atgtgtgtgtctatttatctatattctatatttatagat---aatg 787 Query: 82 tagtccttctaaaaaatatccttatttttactcttattgaatcgcggtaaagtattctaa 141 || | | ||||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 786 tatta-taaaaaaaaatctccttatttt-actcttattgaatcgcggtaaagtattctaa 729 Query: 142 ttcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatttataa 201 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 728 ttcaataaggatttcgcgggcgaatatttactctttcctgtcttatttgttaatttataa 669 Query: 202 acttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttag 261 ||||||||||||| ||| |||||||||||||||||||||||||||||| |||| Sbjct: 668 ccttaccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattag 609 Query: 262 gattcttttcaataaaa-tcctatggaatcataggttctgtcgttcccactgcttctcct 320 ||||||||||| |||| ||||||| | ||||||||||||||||||||||| |||||||| Sbjct: 608 aattcttttcaaaaaaaatcctatgtagtcataggttctgtcgttcccactacttctcct 549 Query: 321 tgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaatt 380 | |||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||| Sbjct: 548 ttaatggttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtcaatt 489 Query: 381 ttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttcttctt 440 |||||||||||||||||||| || ||||||||||||||||| ||||||||| ||||| || Sbjct: 488 ttctcagttttattaacccgagctgctctttattattgctttaaatttgtatttcttgtt 429 Query: 441 tcaagttacaatttttcattctctattagttttattatattgatgctttttcacattgcc 500 |||||||||||||| ||||||| ||| |||||||||||||||||||| | |||||||| Sbjct: 428 tcaagttacaatttcgaattctctgttatttttattatattgatgctttattacattgcc 369 Query: 501 ttttatgatgtaattcatagaccatacacagtggaattctatatcttatttatttcctct 560 ||||||||||||| |||||||||||||| | |||||| ||||||||| ||| ||||||| Sbjct: 368 ttttatgatgtaactcatagaccatacatattggaatcctatatctttctta-ttcctct 310 Query: 561 tccttctttctatc 574 |||||||||||||| Sbjct: 309 tccttctttctatc 296
>gb|AY912208.1| Nastus elegantissimus ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1224 Score = 617 bits (311), Expect = e-173 Identities = 503/566 (88%), Gaps = 14/566 (2%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||||| || ||||||||||||||||| Sbjct: 839 atctagaatatatctag-atgtgtgtgtctatttatctatattctatatttatagataat 781 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 133 ||| || |||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 780 ---gtaatctttcttaacaaaaaatctccttatttttactcttattgaatcgcggtaaag 724 Query: 134 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 193 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 723 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 664 Query: 194 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 248 ||||||| | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 663 atttatattaaaaccttaccaaataaggcaatttttttggtttgttccgccatcccaccc 604 Query: 249 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 308 |||||||| ||||||||||||||||||||||||| || | |||||||||||||||||||| Sbjct: 603 aatgaagtattaggattcttttcaataaaatcctgtgcagtcataggttctgtcgttccc 544 Query: 309 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 368 ||| ||||||||| |||| ||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 543 actacttctcctttaatgattaggtctgaatcccacaatggagcttccaaaaaatttctt 484 Query: 369 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 428 ||||||| |||||| |||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 483 tccgagtcaattttatcagttttattaacccgggccgctctttattattgttttaaattt 424 Query: 429 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 488 ||| ||||| ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 423 gtatttcttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 364 Query: 489 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 548 | ||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 363 tatcacattgccttttatgatgtaactcatagaccatacatattggaatcctatatcttt 304 Query: 549 tttatttcctcttccttctttctatc 574 ||| ||||||||| ||||||||||| Sbjct: 303 ctta-ttcctcttctttctttctatc 279
>gb|AY912207.1| Nastus borbonicus ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1219 Score = 617 bits (311), Expect = e-173 Identities = 503/566 (88%), Gaps = 14/566 (2%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||||| || | ||||||||||||||| Sbjct: 840 atctagaatatatctag-atgtgtgtgtctatttatctatattccatatttatagataat 782 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 133 ||| || |||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 781 ---gtaatctttcttaacaaaaaatctccttatttttactcttattgaatcgcggtaaag 725 Query: 134 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 193 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 724 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 665 Query: 194 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 248 ||||||| | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 664 atttatattataaccttaccaaataaggcaatttttttggtttgttccgccatcccaccc 605 Query: 249 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 308 |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 604 aatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgttccc 545 Query: 309 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 368 ||| ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 544 actacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaaatttctt 485 Query: 369 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 428 ||||||| ||||||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 484 tccgagtcaattttctcagttttattaacccgggccgctctttattattgttttaaattt 425 Query: 429 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 488 ||| ||||| ||||||||||| |||| ||||||| ||| ||||| ||||||||||||| Sbjct: 424 gtatttcttgtttcaagttacgatttcgaattctctgttatttttaatatattgatgctt 365 Query: 489 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 548 | ||||||||| ||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 364 tatcacattgctttttatgatgtaactcatagaccatacatattggaatcctatatcttt 305 Query: 549 tttatttcctcttccttctttctatc 574 ||| ||||||||| ||||||||||| Sbjct: 304 ctta-ttcctcttctttctttctatc 280
>gb|AF133487.1|AF133487 Puelia olyriformis ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1217 Score = 617 bits (311), Expect = e-173 Identities = 436/480 (90%), Gaps = 5/480 (1%) Strand = Plus / Minus Query: 100 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 159 ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 776 tccttatttttactcttattgaatcgcggtaaagtattctaatccaataaagatttcgcg 717 Query: 160 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 219 ||||||||||||||||||||||||||||||||||||| |||| |||||||||||| | | Sbjct: 716 ggcgaatatttactctttcctgtcttatttgttaattcataaccttaccaaataaagcta 657 Query: 220 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 656 tttttttggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 597 Query: 280 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 339 |||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 596 cctatgcagtcataggttctgtcgttcccactgcttctcctttaatggttaggtctgaat 537 Query: 340 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 399 ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 536 cccgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc 477 Query: 400 gggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcat 459 |||| ||||||||||||||||| |||||| || ||||| ||||||||||| |||| || Sbjct: 476 gggccgctctttattattgctttaaatttttatttcttgtttcaagttacgatttcgaat 417 Query: 460 tctctattagttttattatattgatgctttttcacattgccttttatgatgtaattcata 519 |||| ||| |||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 416 tctcagttatttttattatattgatgctttatcacattgccttttatgatataattcata 357 Query: 520 gaccatacacagtggaattctatatcttatttat-----ttcctcttccttctttctatc 574 ||||||||| | |||||| ||||||||| |||| ||||||||||||||||||||| Sbjct: 356 gaccatacatattggaatcctatatctttcttattcctcttcctcttccttctttctatc 297
>gb|AF133460.1|AF133460 Streptogyna americana ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1228 Score = 613 bits (309), Expect = e-172 Identities = 420/458 (91%), Gaps = 1/458 (0%) Strand = Plus / Minus Query: 117 attgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctt 176 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 757 attgaatcgcggtaaagtattctaattcaataaagatttcgcgggcgaatatttactctt 698 Query: 177 tcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnnggtttgttcc 236 |||||||||||||||||||| |||| ||||||||||||| ||| |||||||||| Sbjct: 697 tcctgtcttatttgttaattcataaccttaccaaataagccaatttttttggtttgttcc 638 Query: 237 gccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggt 296 |||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||| Sbjct: 637 gccatcccacccaatgaagtattaggattcttttcaataaaatcctatgcagtcataggt 578 Query: 297 tctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttcc 356 ||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||| Sbjct: 577 tctgtcgttcccactgcttctcctttaatggttaggtttgaatcccgcaatggagcttcc 518 Query: 357 aaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctttattat 416 ||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||| Sbjct: 517 aaaaaatttctttccgagtcaattttatcagttttattaacccgggccgctctttattat 458 Query: 417 tgcttaaaatttgtagttcttctttcaagttacaatttttcattctctattagttttatt 476 |||||||||||| || ||||| ||||||||||| |||| ||||||| ||| |||| || Sbjct: 457 tgcttaaaatttttatttcttgtttcaagttacgatttcgaattctctgttatttttttt 398 Query: 477 atattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaa 536 ||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 397 atattgatgctttatcacattgccttttatgatgtaattcatagaccatacatattggaa 338 Query: 537 ttctatatcttatttatttcctcttccttctttctatc 574 | ||||||||| ||| ||||||||||||||||||||| Sbjct: 337 tcctatatctttctta-ttcctcttccttctttctatc 301
>gb|AY912211.1| Perrierbambus madagascariensis ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1214 Score = 611 bits (308), Expect = e-171 Identities = 505/570 (88%), Gaps = 15/570 (2%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||||| || |||||||||||||| || Sbjct: 829 atctagaatatatctag-atgtgtgtgtctatttatctatattctatatttatagattat 771 Query: 78 a----atgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggt 129 | ||||| || |||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 770 agataatgtaatctttcttaacaaaaaatctccttatttttactcttattgaatcgcggt 711 Query: 130 aaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttattt 189 |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 710 aaagtattctaattcaataaagatttcccgggcgaatatttactctttcctgtcttattt 651 Query: 190 gttaatttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatccc 244 ||||||||||| | ||||||||||||| ||| |||||||||||||||||| Sbjct: 650 gttaatttatattataaccttaccaaataaggcaattattttggtttgttccgccatccc 591 Query: 245 acccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgt 304 |||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||| Sbjct: 590 acccaatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgt 531 Query: 305 tcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatt 364 ||||||| ||||||||| |||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 530 tcccactacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaaatt 471 Query: 365 tctttccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaa 424 ||||||||||| ||||||||||||||||||||||||||| ||||||||||||| | ||| Sbjct: 470 tctttccgagtcaattttctcagttttattaacccgggccgctctttattatttttaaaa 411 Query: 425 atttgtagttcttctttcaagttacaatttttcattctctattagttttattatattgat 484 ||||||| ||||| ||||||||||| |||| ||||||| ||| ||||||||||||||| Sbjct: 410 atttgtatttcttgtttcaagttacgatttcgaattctctgttatttttattatattgat 351 Query: 485 gctttttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatat 544 ||||| ||||||||| ||||||||||||| |||||||||||||| | |||||| |||||| Sbjct: 350 gctttatcacattgctttttatgatgtaactcatagaccatacatattggaatcctatat 291 Query: 545 cttatttatttcctcttccttctttctatc 574 ||| ||| ||||||||| ||||||||||| Sbjct: 290 ctttctta-ttcctcttctttctttctatc 262
>gb|AF133469.1|AF133469 Nastus elatus ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1211 Score = 611 bits (308), Expect = e-171 Identities = 503/566 (88%), Gaps = 16/566 (2%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||||| || ||||||||||||||| Sbjct: 860 atctagaatatatctag-atgtgtgtgtctatttatctatattctatatttatagata-- 804 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 133 |||| || |||| ||||||| |||||||||| ||||||||||||||||||||||| Sbjct: 803 --tgtaatctttcttaacaaaaaatctccttatttt-actcttattgaatcgcggtaaag 747 Query: 134 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 193 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 746 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 687 Query: 194 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 248 ||||||| | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 686 atttatattataaccttaccaaataaggcaatttttttggtttgttccgccatcccaccc 627 Query: 249 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 308 |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 626 aatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgttccc 567 Query: 309 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 368 ||| ||||||||| |||| ||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 566 actacttctcctttaatgattaggtctgaatcccacaatggagcttccaaaaaatttctt 507 Query: 369 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 428 ||||||| ||||||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 506 tccgagtcaattttctcagttttattaacccgggccgctctttattattgttttaaattt 447 Query: 429 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 488 ||| ||||| ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 446 gtatttcttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 387 Query: 489 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 548 | ||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 386 tatcacattgccttttatgatgtaactcatagaccatacatattggaatcctatatcttt 327 Query: 549 tttatttcctcttccttctttctatc 574 ||| ||||||||| ||||||||||| Sbjct: 326 ctta-ttcctcttctttctttctatc 302
>gb|U54746.1|NEU54746 Nastus elatus ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1071 Score = 611 bits (308), Expect = e-171 Identities = 503/566 (88%), Gaps = 16/566 (2%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||||| || ||||||||||||||| Sbjct: 837 atctagaatatatctag-atgtgtgtgtctatttatctatattctatatttatagata-- 781 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 133 |||| || |||| ||||||| |||||||||| ||||||||||||||||||||||| Sbjct: 780 --tgtaatctttcttaacaaaaaatctccttatttt-actcttattgaatcgcggtaaag 724 Query: 134 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 193 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 723 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 664 Query: 194 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 248 ||||||| | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 663 atttatattataaccttaccaaataaggcaatttttttggtttgttccgccatcccaccc 604 Query: 249 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 308 |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 603 aatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgttccc 544 Query: 309 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 368 ||| ||||||||| |||| ||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 543 actacttctcctttaatgattaggtctgaatcccacaatggagcttccaaaaaatttctt 484 Query: 369 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 428 ||||||| ||||||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 483 tccgagtcaattttctcagttttattaacccgggccgctctttattattgttttaaattt 424 Query: 429 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 488 ||| ||||| ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 423 gtatttcttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 364 Query: 489 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 548 | ||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 363 tatcacattgccttttatgatgtaactcatagaccatacatattggaatcctatatcttt 304 Query: 549 tttatttcctcttccttctttctatc 574 ||| ||||||||| ||||||||||| Sbjct: 303 ctta-ttcctcttctttctttctatc 279
>gb|AY912203.1| Decaryochloa diadelpha ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1173 Score = 609 bits (307), Expect = e-171 Identities = 499/562 (88%), Gaps = 14/562 (2%) Strand = Plus / Minus Query: 22 agaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataataatg 81 |||||||||| || ||||||||| |||||||||| || ||||||||||||||||| | Sbjct: 834 agaatatatctag-atgtgtgtgtctatttatctatattctatatttatagataat---g 779 Query: 82 tagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaagtatt 137 || || |||| ||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 778 taatctttcttaacaaaaaatctccttatttttactcttattgaatcgcggtaaagtatt 719 Query: 138 ctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaattt 197 |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 718 ctaattcaataaagatttcgcgggcgaatattgactctttcctgtcttatttgttaattt 659 Query: 198 -----ataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatg 252 |||| ||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 658 ttattataaccttaccaaataaggcaattattttggtttgttccgccatcccacccaatg 599 Query: 253 aagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactg 312 |||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 598 aagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgttcccacta 539 Query: 313 cttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccg 372 ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 538 cttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaaatttctttccg 479 Query: 373 agttaattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtag 432 ||| ||||||||||||||||||||||||||| |||||||||||||| || |||||||| Sbjct: 478 agtcaattttctcagttttattaacccgggccgctctttattattgttttcaatttgtat 419 Query: 433 ttcttctttcaagttacaatttttcattctctattagttttattatattgatgctttttc 492 ||||| ||||||||||| |||| ||||||| ||| |||||||||||||||||||| || Sbjct: 418 ttcttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctttatc 359 Query: 493 acattgccttttatgatgtaattcatagaccatacacagtggaattctatatcttattta 552 ||||||| ||||||||||||| |||||||||||||| | |||||| ||||||||| ||| Sbjct: 358 acattgctttttatgatgtaactcatagaccatacatattggaatcctatatctttctta 299 Query: 553 tttcctcttccttctttctatc 574 ||||||||| ||||||||||| Sbjct: 298 -ttcctcttctttctttctatc 278
>gb|AF133471.1|AF133471 Glaziophyton mirabile ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1222 Score = 603 bits (304), Expect = e-169 Identities = 503/566 (88%), Gaps = 17/566 (3%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||||| || ||||||||||||||| Sbjct: 857 atctagaatatatctag-atgtgtgtgtctatttatctatattctatatttatagata-- 801 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 133 |||| || |||| ||||||| |||||||||| |||||||||||||||||||||| Sbjct: 800 --tgtaatctttcttaaaaaaaaatctccttattttg-ctcttattgaatcgcggtaaag 744 Query: 134 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 193 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 743 tattctaattcaataaggatttcgcgggcgaatatttactctttcctgtcttatttgtta 684 Query: 194 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 248 ||||||| | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 683 atttatattataaccttaccaaataaggcaatttttttggtttgttccgccatcccaccc 624 Query: 249 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 308 |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 623 aatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgttccc 564 Query: 309 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 368 ||| ||||||||| ||||||||||||| ||| || ||| ||||||||||||||||||||| Sbjct: 563 actacttctcctttaatggttaggtcttaattccacaatggagcttccaaaaaatttctt 504 Query: 369 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 428 ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 503 tccgagtcaattttctcagttttattaacccgggccgctctttattattgcttaaaattt 444 Query: 429 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 488 ||| ||||| |||| |||||| | ||| ||||||| ||| ||||||||| ||||||||| Sbjct: 443 gtatttcttgtttcgagttacga-tttcaattctctgttatttttattattttgatgctt 385 Query: 489 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 548 | |||||||||||||||||||||||||||||||||||||| | |||||| ||||||||| Sbjct: 384 tatcacattgccttttatgatgtaattcatagaccatacatattggaatcctatatcttt 325 Query: 549 tttatttcctcttccttctttctatc 574 ||| ||||||||| ||||||||||| Sbjct: 324 ctta-ttcctcttctttctttctatc 300
>gb|AF133470.1|AF133470 Bambusa longispiculata ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1206 Score = 603 bits (304), Expect = e-169 Identities = 502/566 (88%), Gaps = 16/566 (2%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||||| || |||||||||| ||||| Sbjct: 855 atctagaatatatctag-atgtgtgtgtctatttatctatattctatatttatggataa- 798 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 133 ||| || |||| ||||||| |||||||||| ||||||||||||||||||| ||| Sbjct: 797 ---gtaatctttcttaacaaaaaatctccttatttt-actcttattgaatcgcggttaag 742 Query: 134 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 193 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 682 Query: 194 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 248 ||||||| | ||||||||||||||||| |||||||||||||||||||||| Sbjct: 681 atttatattataaccttaccaaataagacaatttttttggtttgttccgccatcccaccc 622 Query: 249 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 308 |||||||| ||||||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 621 aatgaagtattaggattcttttcaattaaatcctatgcagtcataggttctgtcgttccc 562 Query: 309 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 368 ||| ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 561 actacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaaatttctt 502 Query: 369 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 428 ||||||| ||||||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 501 tccgagtcaattttctcagttttattaacccgggccgctctttattattgttttaaattt 442 Query: 429 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 488 ||| ||||| ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 441 gtatttcttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 382 Query: 489 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 548 | ||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 381 tatcacattgccttttatgatgtaactcatagaccatacatattggaatcctatatcttt 322 Query: 549 tttatttcctcttccttctttctatc 574 ||| ||||||||| ||||||||||| Sbjct: 321 ctta-ttcctcttctttctttctatc 297
>gb|U54748.1|GMU54748 Glaziophyton mirabile ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1068 Score = 603 bits (304), Expect = e-169 Identities = 503/566 (88%), Gaps = 17/566 (3%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||||| || ||||||||||||||| Sbjct: 834 atctagaatatatctag-atgtgtgtgtctatttatctatattctatatttatagata-- 778 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 133 |||| || |||| ||||||| |||||||||| |||||||||||||||||||||| Sbjct: 777 --tgtaatctttcttaaaaaaaaatctccttattttg-ctcttattgaatcgcggtaaag 721 Query: 134 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 193 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 720 tattctaattcaataaggatttcgcgggcgaatatttactctttcctgtcttatttgtta 661 Query: 194 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 248 ||||||| | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 660 atttatattataaccttaccaaataaggcaatttttttggtttgttccgccatcccaccc 601 Query: 249 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 308 |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 600 aatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgttccc 541 Query: 309 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 368 ||| ||||||||| ||||||||||||| ||| || ||| ||||||||||||||||||||| Sbjct: 540 actacttctcctttaatggttaggtcttaattccacaatggagcttccaaaaaatttctt 481 Query: 369 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 428 ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 480 tccgagtcaattttctcagttttattaacccgggccgctctttattattgcttaaaattt 421 Query: 429 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 488 ||| ||||| |||| |||||| | ||| ||||||| ||| ||||||||| ||||||||| Sbjct: 420 gtatttcttgtttcgagttacga-tttcaattctctgttatttttattattttgatgctt 362 Query: 489 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 548 | |||||||||||||||||||||||||||||||||||||| | |||||| ||||||||| Sbjct: 361 tatcacattgccttttatgatgtaattcatagaccatacatattggaatcctatatcttt 302 Query: 549 tttatttcctcttccttctttctatc 574 ||| ||||||||| ||||||||||| Sbjct: 301 ctta-ttcctcttctttctttctatc 277
>gb|U54745.1|BLU54745 Bambusa longispiculata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1065 Score = 603 bits (304), Expect = e-169 Identities = 502/566 (88%), Gaps = 16/566 (2%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||||| || |||||||||| ||||| Sbjct: 832 atctagaatatatctag-atgtgtgtgtctatttatctatattctatatttatggataa- 775 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 133 ||| || |||| ||||||| |||||||||| ||||||||||||||||||| ||| Sbjct: 774 ---gtaatctttcttaacaaaaaatctccttatttt-actcttattgaatcgcggttaag 719 Query: 134 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 193 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 718 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 659 Query: 194 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 248 ||||||| | ||||||||||||||||| |||||||||||||||||||||| Sbjct: 658 atttatattataaccttaccaaataagacaatttttttggtttgttccgccatcccaccc 599 Query: 249 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 308 |||||||| ||||||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 598 aatgaagtattaggattcttttcaattaaatcctatgcagtcataggttctgtcgttccc 539 Query: 309 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 368 ||| ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 538 actacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaaatttctt 479 Query: 369 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 428 ||||||| ||||||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 478 tccgagtcaattttctcagttttattaacccgggccgctctttattattgttttaaattt 419 Query: 429 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 488 ||| ||||| ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 418 gtatttcttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 359 Query: 489 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 548 | ||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 358 tatcacattgccttttatgatgtaactcatagaccatacatattggaatcctatatcttt 299 Query: 549 tttatttcctcttccttctttctatc 574 ||| ||||||||| ||||||||||| Sbjct: 298 ctta-ttcctcttctttctttctatc 274
>gb|AF133465.1|AF133465 Arundinaria gigantea ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1225 Score = 601 bits (303), Expect = e-168 Identities = 502/566 (88%), Gaps = 15/566 (2%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||||| || ||||||||||||||||| Sbjct: 860 atctagaatatatctag-atgtgtgtgtctatttatctatattctatatttatagataat 802 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 133 ||| || |||| ||||||| ||||||||| |||||||||||||||||| |||| Sbjct: 801 ---gtaatctttcttaaaaaaaaatctccttatttg-actcttattgaatcgcgggaaag 746 Query: 134 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 193 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 745 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 686 Query: 194 atttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatga 253 |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 685 atttataaccttaccaaataaggcaatttttttggtttgttccgccatcccacccaatga 626 Query: 254 agtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgc 313 ||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||| | Sbjct: 625 agtcttaggattcttttcaataaaatcctatgcagtcataggttctgtcgttcccactac 566 Query: 314 ttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccga 373 |||||||| |||||||||||||||||||||||| ||||||| | |||||||||||||||| Sbjct: 565 ttctcctttaatggttaggtctgaatcccgcaatggagctttccaaaaatttctttccga 506 Query: 374 gttaattttctcagttttattaacccgggcggctc-----tttattattgcttaaaattt 428 || ||||||||||||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 505 gtcaattttctcagttttattaacccgggccgctctttattttattattgcttaaaattt 446 Query: 429 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 488 || || || ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 445 ctattttttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 386 Query: 489 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 548 | ||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 385 tatcacattgccttttatgatgtaactcatagaccatacatattggaatcctatatcttt 326 Query: 549 tttatttcctcttccttctttctatc 574 ||| ||| ||||||||||||||||| Sbjct: 325 ctta-ttcttcttccttctttctatc 301
>gb|U54742.1|AGU54742 Arundinaria gigantea ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1065 Score = 601 bits (303), Expect = e-168 Identities = 502/566 (88%), Gaps = 15/566 (2%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||||| || ||||||||||||||||| Sbjct: 837 atctagaatatatctag-atgtgtgtgtctatttatctatattctatatttatagataat 779 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 133 ||| || |||| ||||||| ||||||||| |||||||||||||||||| |||| Sbjct: 778 ---gtaatctttcttaaaaaaaaatctccttatttg-actcttattgaatcgcgggaaag 723 Query: 134 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 193 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 663 Query: 194 atttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatga 253 |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 662 atttataaccttaccaaataaggcaatttttttggtttgttccgccatcccacccaatga 603 Query: 254 agtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgc 313 ||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||| | Sbjct: 602 agtcttaggattcttttcaataaaatcctatgcagtcataggttctgtcgttcccactac 543 Query: 314 ttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccga 373 |||||||| |||||||||||||||||||||||| ||||||| | |||||||||||||||| Sbjct: 542 ttctcctttaatggttaggtctgaatcccgcaatggagctttccaaaaatttctttccga 483 Query: 374 gttaattttctcagttttattaacccgggcggctc-----tttattattgcttaaaattt 428 || ||||||||||||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 482 gtcaattttctcagttttattaacccgggccgctctttattttattattgcttaaaattt 423 Query: 429 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 488 || || || ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 422 ctattttttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 363 Query: 489 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 548 | ||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 362 tatcacattgccttttatgatgtaactcatagaccatacatattggaatcctatatcttt 303 Query: 549 tttatttcctcttccttctttctatc 574 ||| ||| ||||||||||||||||| Sbjct: 302 ctta-ttcttcttccttctttctatc 278
>gb|AY912200.1| Schizostachyum brachycladum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1227 Score = 597 bits (301), Expect = e-167 Identities = 501/566 (88%), Gaps = 12/566 (2%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||||| || |||||| |||| | | | Sbjct: 841 atctagaatatatctag-atgtgtgtgtctatttatctatattctatatatatataga-t 784 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 133 |||||| || |||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 783 aatgtaatctttcttaacaaaaaatctccttatttttactcttattgaatcgcggtaaag 724 Query: 134 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 193 |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| || Sbjct: 723 tattttaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgcta 664 Query: 194 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 248 ||||||| | ||||||||||||| ||| || ||||||||||||||||||| Sbjct: 663 atttatattataaccttaccaaataaggcaatttttttgggttgttccgccatcccaccc 604 Query: 249 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 308 |||||||| ||| |||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 603 aatgaagtattatgattcttttcaataaaatcctatgcagtcataggttctgtcgttccc 544 Query: 309 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 368 ||| ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 543 actacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaaatttctt 484 Query: 369 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 428 ||||||| ||||||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 483 tccgagtcaattttctcagttttattaacccgggccgctctttattattgttttaaattt 424 Query: 429 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 488 ||| ||||| ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 423 gtatttcttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 364 Query: 489 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 548 | ||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 363 tatcacattgccttttatgatgtaactcatagaccatacatattggaatcctatatcttt 304 Query: 549 tttatttcctcttccttctttctatc 574 ||| ||||||||| ||||||||||| Sbjct: 303 ctta-ttcctcttctttctttctatc 279
>gb|AY912214.1| Temburongia simplex ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1075 Score = 595 bits (300), Expect = e-167 Identities = 479/539 (88%), Gaps = 13/539 (2%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||||| || ||||||||||||||||| Sbjct: 738 atctagaatatatctag-atgtgtgtgtctatttatctatattctatatttatagataat 680 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 133 ||| || |||| ||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 679 ---gtaatctttcttaacaaaaaatctccttaattttactcttattgaatcgcggtaaag 623 Query: 134 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 193 |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct: 622 tattctaattcaataaagatttcgcgggcgaataattactctttcctgtcttatttgtta 563 Query: 194 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 248 ||||||| | ||||||||||||| || |||||||||||||||||||||| Sbjct: 562 atttatattataaccttaccaaataaggaaatttttttggtttgttccgccatcccaccc 503 Query: 249 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 308 |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 502 aatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgttccc 443 Query: 309 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 368 ||| ||||||||| ||||||||||||||||| || ||| ||||||||||||||||||||| Sbjct: 442 actacttctcctttaatggttaggtctgaattccacaatggagcttccaaaaaatttctt 383 Query: 369 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 428 ||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 382 tccgagtcaattttctcagttttattaacccgggccgctctttattattgtttaaaattt 323 Query: 429 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 488 ||| ||||| ||||||||||| |||| ||||||| ||| ||||||||||| ||||||| Sbjct: 322 gtatttcttgtttcaagttacgatttcgaattctctgttatttttattatatggatgctt 263 Query: 489 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctt 547 | ||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 262 tatcacattgccttttatgatgtaactcatagaccatacatattggaatcctatatctt 204
>gb|AF133466.1|AF133466 Pseudosasa japonica ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1225 Score = 595 bits (300), Expect = e-167 Identities = 501/566 (88%), Gaps = 15/566 (2%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||||| || ||||||||||||||||| Sbjct: 860 atctagaatatatctag-atgtgtgtgtctatttatctatattctatatttatagataat 802 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 133 ||| || |||| ||||||| ||||||||| |||||||||||||||||| |||| Sbjct: 801 ---gtaatctttcttaaaaaaaaatctccttatttg-actcttattgaatcgcgggaaag 746 Query: 134 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 193 || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 745 tantctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 686 Query: 194 atttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatga 253 |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 685 atttataaccttaccaaataaggcaatttttttggtttgttccgccatcccacccaatga 626 Query: 254 agtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgc 313 ||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||| | Sbjct: 625 agtcttaggattcttttcaataaaatcctatgcagtcataggttctgtcgttcccactac 566 Query: 314 ttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccga 373 |||||||| |||||||||||||||||||||||| ||||||| | |||||||||||||||| Sbjct: 565 ttctcctttaatggttaggtctgaatcccgcaatggagctttccaaaaatttctttccga 506 Query: 374 gttaattttctcagttttattaacccgggcggctc-----tttattattgcttaaaattt 428 || ||||||||||||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 505 gtcaattttctcagttttattaacccgggccgctctttattttattattgcttaaaattt 446 Query: 429 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 488 || || || ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 445 ctattttttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 386 Query: 489 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 548 | ||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 385 tatcacattgccttttatgatgtaactcatagaccatacatattggaatcctatatcttt 326 Query: 549 tttatttcctcttccttctttctatc 574 ||| ||| ||||||||||||||||| Sbjct: 325 ctta-ttcttcttccttctttctatc 301
>gb|U54743.1|PJU54743 Pseudosasa japonica ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1065 Score = 595 bits (300), Expect = e-167 Identities = 501/566 (88%), Gaps = 15/566 (2%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||||| || ||||||||||||||||| Sbjct: 837 atctagaatatatctag-atgtgtgtgtctatttatctatattctatatttatagataat 779 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 133 ||| || |||| ||||||| ||||||||| |||||||||||||||||| |||| Sbjct: 778 ---gtaatctttcttaaaaaaaaatctccttatttg-actcttattgaatcgcgggaaag 723 Query: 134 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 193 || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 tantctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 663 Query: 194 atttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatga 253 |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 662 atttataaccttaccaaataaggcaatttttttggtttgttccgccatcccacccaatga 603 Query: 254 agtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgc 313 ||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||| | Sbjct: 602 agtcttaggattcttttcaataaaatcctatgcagtcataggttctgtcgttcccactac 543 Query: 314 ttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccga 373 |||||||| |||||||||||||||||||||||| ||||||| | |||||||||||||||| Sbjct: 542 ttctcctttaatggttaggtctgaatcccgcaatggagctttccaaaaatttctttccga 483 Query: 374 gttaattttctcagttttattaacccgggcggctc-----tttattattgcttaaaattt 428 || ||||||||||||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 482 gtcaattttctcagttttattaacccgggccgctctttattttattattgcttaaaattt 423 Query: 429 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 488 || || || ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 422 ctattttttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 363 Query: 489 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 548 | ||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 362 tatcacattgccttttatgatgtaactcatagaccatacatattggaatcctatatcttt 303 Query: 549 tttatttcctcttccttctttctatc 574 ||| ||| ||||||||||||||||| Sbjct: 302 ctta-ttcttcttccttctttctatc 278
>gb|AY912190.1| Atractantha radiata ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1175 Score = 593 bits (299), Expect = e-166 Identities = 506/574 (88%), Gaps = 24/574 (4%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||||| || ||||||||||||||| Sbjct: 847 atctagaatatatctag-atgtgtgtgtctatttatctatattctatatttatagata-- 791 Query: 78 aatgtagtccttct-------aaaaaatatccttatttttactcttattg-----aatcg 125 ||||| || |||| ||||||| ||||||||||||||||||||| ||||| Sbjct: 790 -atgtaatctttcttaaaaaaaaaaaatctccttatttttactcttattgtattgaatcg 732 Query: 126 cggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtctt 185 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 731 cggtaaagtattctaattcaataa--atttcgcgggcgaatatttactctttcctgtctt 674 Query: 186 atttgttaatttata-----aacttaccaaataagacaannnnnnnggtttgttccgcca 240 ||||||||||||||| | ||||||||||||| ||| |||||||||||||| Sbjct: 673 atttgttaatttatattataaccttaccaaataaggcaatttttttggtttgttccgcca 614 Query: 241 tcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctg 300 |||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||| Sbjct: 613 tcccacccaatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctg 554 Query: 301 tcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaa 360 ||||||||||| ||||||||| ||||||||||||||||| || ||| ||||||||||||| Sbjct: 553 tcgttcccactacttctcctttaatggttaggtctgaattccacaatggagcttccaaaa 494 Query: 361 aatttctttccgagttaattttctcagttttattaacccgggcggctctttattattgct 420 ||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 493 aatttctttccgagtcaattttctcagttttattaacccgggccgctctttattcttgct 434 Query: 421 taaaatttgtagttcttctttcaagttacaatttttcattctctattagttttattatat 480 ||||||||||| ||||| |||| |||||| |||| ||||||| ||| ||||||||||| Sbjct: 433 taaaatttgtatttcttgtttcgagttacgatttcgaattctctgttatttttattatat 374 Query: 481 tgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaattct 540 ||||||||| |||||||||||||||||||||||||||||||||||||| | |||||| || Sbjct: 373 tgatgctttatcacattgccttttatgatgtaattcatagaccatacatattggaatcct 314 Query: 541 atatcttatttatttcctcttccttctttctatc 574 ||||||| ||| ||||||||| ||||||||||| Sbjct: 313 atatctttctta-ttcctcttctttctttctatc 281
>gb|AY912210.1| Nastus productus ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1067 Score = 591 bits (298), Expect = e-165 Identities = 433/479 (90%), Gaps = 6/479 (1%) Strand = Plus / Minus Query: 101 ccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgg 160 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 751 ccttatttttactcttattgaatcgcggtaaagtattctaattcaataaagatttcgcgg 692 Query: 161 gcgaatatttactctttcctgtcttatttgttaatttata-----aacttaccaaataag 215 |||||||||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 691 gcgaatatttactctttcctgtcttatttgttaatttatattataaccttaccaaataag 632 Query: 216 acaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaata 275 ||| |||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 631 gcaatttttttggtttgttccgccatcccacccaatgaagtattaggattcttttcaata 572 Query: 276 aaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtct 335 |||||||||| | ||||||||||||||||||||||| ||||||||| |||| |||||||| Sbjct: 571 aaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatgattaggtct 512 Query: 336 gaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttatta 395 ||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 511 gaatcccacaatggagcttccaaaaaatttctttccgagtcaattttctcagttttatta 452 Query: 396 acccgggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaatttt 455 ||| |||| |||||||||||||| || ||||||||| ||||| ||||||||||| |||| Sbjct: 451 acctgggccgctctttattattgttttaaatttgtatttcttgtttcaagttacgatttc 392 Query: 456 tcattctctattagttttattatattgatgctttttcacattgccttttatgatgtaatt 515 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 391 gaattctctgttatttttattatattgatgctttatcacattgccttttatgatgtaact 332 Query: 516 catagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||||||||||| | |||||| ||||||||| ||| ||||||||| ||||||||||| Sbjct: 331 catagaccatacatattggaatcctatatctttctta-ttcctcttctttctttctatc 274 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/60 (90%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||||| || ||||||||||||||||| Sbjct: 836 atctagaatatatctag-atgtgtgtgtctatttatctatattctatatttatagataat 778
>gb|AY912191.1| Aulonemia patula ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1186 Score = 587 bits (296), Expect = e-164 Identities = 499/566 (88%), Gaps = 14/566 (2%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || |||||||||| |||||||||| || ||||||||||||||||| Sbjct: 808 atctagaatatatctag-atgtgtgtggctatttatctatattctatatttatagataat 750 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 133 ||| || |||| ||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 749 ---gtaatctttcttaaaaaaaaatctccttatttttactcttattgaatcgcgggaaag 693 Query: 134 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 193 ||||||||||||||| |||||||||||||||||||||||||||||| |||||||| || Sbjct: 692 aattctaattcaataaagatttcgcgggcgaatatttactctttcctgccttatttgcta 633 Query: 194 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 248 ||||||| | ||||||||||||| ||| || ||||||||||||||||||| Sbjct: 632 atttatattataaccttaccaaataaggcaatttttttggnttgttccgccatcccaccc 573 Query: 249 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 308 |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 572 aatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgttccc 513 Query: 309 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 368 ||| |||||| || ||||||||||||||||| || ||| |||||||||||||| |||||| Sbjct: 512 actacttctcttttaatggttaggtctgaattccacaatggagcttccaaaaagtttctt 453 Query: 369 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 428 |||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 452 tccgagccaattttctcagttttcttaacccgggccgctctttattattgcttaaaattt 393 Query: 429 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 488 ||| ||||| |||| |||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 392 gtatttcttgtttcgagttacgatttcgaattctctgttatttttattatattgatgctt 333 Query: 489 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 548 | |||||||||||||||||||||||||||||||||||||| | |||||| ||||||||| Sbjct: 332 tatcacattgccttttatgatgtaattcatagaccatacatattggaatcctatatcttt 273 Query: 549 tttatttcctcttccttctttctatc 574 ||| ||||||||| ||||||||||| Sbjct: 272 ctta-ttcctcttctttctttctatc 248
>gb|AF133467.1|AF133467 Phyllostachys pubescens ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1232 Score = 585 bits (295), Expect = e-164 Identities = 500/566 (88%), Gaps = 15/566 (2%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||||| || ||||||||||||||||| Sbjct: 860 atctagaatatatctag-atgtgtgtgtctatttatctatattctatatttatagataat 802 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 133 ||| || |||| ||||||| |||||||| |||||||||||||||||| |||| Sbjct: 801 ---gtaatctttcttaaaaaaaaatctccttattcg-actcttattgaatcgcgggaaag 746 Query: 134 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 193 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 745 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 686 Query: 194 atttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatga 253 |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 685 atttataaccttaccaaataaggcaatttttttggtttgttccgccatcccacccaatga 626 Query: 254 agtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgc 313 ||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||| | Sbjct: 625 agtcttaggattcttttcaataaaatcctatgcagtcataggttctgtcgttcccactac 566 Query: 314 ttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccga 373 |||||||| |||||||||||||||||||| ||| ||||||| | |||||||||||||||| Sbjct: 565 ttctcctttaatggttaggtctgaatcccacaatggagctttccaaaaatttctttccga 506 Query: 374 gttaattttctcagttttattaacccgggcggctc-----tttattattgcttaaaattt 428 || ||||||||||||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 505 gtcaattttctcagttttattaacccgggccgctctttattttattattgcttaaaattt 446 Query: 429 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 488 || || || ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 445 ctattttttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 386 Query: 489 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 548 | ||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 385 tatcacattgccttttatgatgtaactcatagaccatacatattggaatcctatatcttt 326 Query: 549 tttatttcctcttccttctttctatc 574 ||| ||| ||||||||||||||||| Sbjct: 325 ctta-ttcttcttccttctttctatc 301
>gb|U54744.1|PPU54744 Phyllostachys pubescens ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1072 Score = 585 bits (295), Expect = e-164 Identities = 500/566 (88%), Gaps = 15/566 (2%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||||| || ||||||||||||||||| Sbjct: 837 atctagaatatatctag-atgtgtgtgtctatttatctatattctatatttatagataat 779 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 133 ||| || |||| ||||||| |||||||| |||||||||||||||||| |||| Sbjct: 778 ---gtaatctttcttaaaaaaaaatctccttattcg-actcttattgaatcgcgggaaag 723 Query: 134 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 193 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 663 Query: 194 atttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatga 253 |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 662 atttataaccttaccaaataaggcaatttttttggtttgttccgccatcccacccaatga 603 Query: 254 agtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgc 313 ||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||| | Sbjct: 602 agtcttaggattcttttcaataaaatcctatgcagtcataggttctgtcgttcccactac 543 Query: 314 ttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccga 373 |||||||| |||||||||||||||||||| ||| ||||||| | |||||||||||||||| Sbjct: 542 ttctcctttaatggttaggtctgaatcccacaatggagctttccaaaaatttctttccga 483 Query: 374 gttaattttctcagttttattaacccgggcggctc-----tttattattgcttaaaattt 428 || ||||||||||||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 482 gtcaattttctcagttttattaacccgggccgctctttattttattattgcttaaaattt 423 Query: 429 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 488 || || || ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 422 ctattttttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 363 Query: 489 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 548 | ||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 362 tatcacattgccttttatgatgtaactcatagaccatacatattggaatcctatatcttt 303 Query: 549 tttatttcctcttccttctttctatc 574 ||| ||| ||||||||||||||||| Sbjct: 302 ctta-ttcttcttccttctttctatc 278
>gb|AY912209.1| Nastus elongatus ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1098 Score = 579 bits (292), Expect = e-162 Identities = 498/566 (87%), Gaps = 20/566 (3%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||||| || ||||||||||||||||| Sbjct: 714 atctagaatatatctag-atgtgtgtgtctatttatctatattctatatttatagataat 656 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 133 ||| || |||| ||||||| | |||||||||||||||||||||||||||||||| Sbjct: 655 ---gtaatctttcttaacaaaaaatcttcttatttttactcttattgaatcgcggtaaag 599 Query: 134 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 193 |||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 598 tattctaa------aaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 545 Query: 194 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 248 ||||||| | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 544 atttatattataaccttaccaaataaggcaattattttggtttgttccgccatcccaccc 485 Query: 249 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 308 |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 484 aatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgttccc 425 Query: 309 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 368 ||| ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 424 actacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaaatttctt 365 Query: 369 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 428 ||||||| ||||||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 364 tccgagtcaattttctcagttttattaacccgggccgctctttattattgttttaaattt 305 Query: 429 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 488 ||| ||||| ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 304 gtatttcttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 245 Query: 489 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 548 | ||||||||| ||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 244 tatcacattgctttttatgatgtaactcatagaccatacatattggaatcctatatcttt 185 Query: 549 tttatttcctcttccttctttctatc 574 ||| ||||||||| ||||||||||| Sbjct: 184 ctta-ttcctcttctttctttctatc 160
>gb|AY912205.1| Greslania rivularis ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1228 Score = 579 bits (292), Expect = e-162 Identities = 499/566 (88%), Gaps = 16/566 (2%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||||| || ||||||||||||||||| Sbjct: 843 atctagaatatatctag-atgtgtgtgtctatttatctatattctatatttatagataat 785 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 133 ||| || |||| ||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 784 ---gtaatctttcttaacaaaaaatctccttatttttactcttattgaatcgcgataaag 728 Query: 134 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 193 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 727 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 668 Query: 194 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 248 ||||||| | |||| |||||||| ||| |||||||||||||||||||||| Sbjct: 667 atttatattataaccttagcaaataaggcaatttttttggtttgttccgccatcccaccc 608 Query: 249 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 308 ||| |||| |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 607 aataaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgttccc 548 Query: 309 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 368 ||| ||||||||| |||| ||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 547 actacttctcctttaatgattaggtctgaatcccacaatggagcttccaaaaaatttctt 488 Query: 369 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 428 ||||||| ||||||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 487 tccgagtcaattttctcagttttattaacccgggccgctctttattattgttttaaattt 428 Query: 429 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 488 ||| ||||| ||||||||||| |||| ||||||| ||| ||| || ||||||||||| Sbjct: 427 gtatttcttgtttcaagttacgatttcgaattctctgtta--ttttttttattgatgctt 370 Query: 489 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 548 | ||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 369 tatcacattgccttttatgatgtaactcatagaccatacatattggaatcctatatcttt 310 Query: 549 tttatttcctcttccttctttctatc 574 ||| ||||||||| ||||||||||| Sbjct: 309 ctta-ttcctcttctttctttctatc 285
>gb|AF133476.1|AF133476 Brachyelytrum erectum ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1248 Score = 573 bits (289), Expect = e-160 Identities = 418/462 (90%), Gaps = 1/462 (0%) Strand = Plus / Minus Query: 113 tcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaatatttac 172 ||||||||||| | | |||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 762 tcttattgaattgggttaaagtattctaattcaataaggatttcgcgggcgaatatttac 703 Query: 173 tctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnnggtttg 232 ||||||||||||||||||||||||||||| ||||||||||||| ||| |||||| Sbjct: 702 tctttcctgtcttatttgttaatttataaccttaccaaataaggcaatttttttggtttg 643 Query: 233 ttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcat 292 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||| Sbjct: 642 ttccgccatcccatccaatgaagtattaggattcttttcaataaaatcctatggagtcat 583 Query: 293 aggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagc 352 ||||||||||||||||||||||||| || ||||||||||||| |||||||||| ||||| Sbjct: 582 gggttctgtcgttcccactgcttctcttttaatggttaggtctcaatcccgcaatggagc 523 Query: 353 ttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctcttta 412 ||||||||||| | ||||||||| |||||||||||||||| |||||||| | |||||||| Sbjct: 522 ttccaaaaaatatatttccgagtaaattttctcagttttaataacccggaccgctcttta 463 Query: 413 ttattgcttaaaatttgtagttcttctttcaagttacaatttttcattctctattagttt 472 ||||||||| ||||| ||||||||| ||||||||||| |||| ||| ||| ||| ||| Sbjct: 462 ttattgctttaaattagtagttcttgtttcaagttacgatttcgaattttctgttatttt 403 Query: 473 tattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagt 532 ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| | | Sbjct: 402 tattatattgatgctttatcacattgccttttatgatataattcatagaccatacatatt 343 Query: 533 ggaattctatatcttatttatttcctcttccttctttctatc 574 ||||| ||||||||| |||| ||||||||||||||||||||| Sbjct: 342 ggaatcctatatctttttta-ttcctcttccttctttctatc 302
>gb|AF133468.1|AF133468 Schizostachyum luzonicum ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1225 Score = 573 bits (289), Expect = e-160 Identities = 500/567 (88%), Gaps = 17/567 (2%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||||| || ||||||||||||||| Sbjct: 861 atctagaatatatctag-atgtgtgtgtctatttatctatattctatatttatagata-- 805 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 133 |||| || |||| ||||||| |||||||||| ||||||||||||||||||||||| Sbjct: 804 --tgtaatctttcttaacaaaaaatctccttatttt-actcttattgaatcgcggtaaag 748 Query: 134 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 193 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 747 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 688 Query: 194 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 248 ||||||| | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 687 atttatattataaccttaccaaataaggcaatttttttggtttgttccgccatcccaccc 628 Query: 249 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 308 |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 627 aatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgttccc 568 Query: 309 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 368 ||| ||||||||| |||| ||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 567 actacttctcctttaatgattaggtctgaatcccacaatggagcttccaaaaaatttctt 508 Query: 369 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 428 ||||||| ||||||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 507 tccgagtcaattttctcagttttattaacccgggccgctctttattattgttttaaattt 448 Query: 429 gtagttcttctttcaagttacaatttttcattctctatta-gttttattatattgatgct 487 ||| ||||| ||||||||||| |||| ||||||| ||| |||| || |||||||||| Sbjct: 447 gtatttcttgtttcaagttacgatttcgaattctctgttatttttttttttattgatgct 388 Query: 488 ttttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctt 547 || ||||||||||||||||||||||| |||||||||||||| | || ||| ||||||||| Sbjct: 387 ttatcacattgccttttatgatgtaactcatagaccatacatattgaaatcctatatctt 328 Query: 548 atttatttcctcttccttctttctatc 574 ||| ||||||||| ||||||||||| Sbjct: 327 tctta-ttcctcttctttctttctatc 302
>gb|U54747.1|SLU54747 Schizostachyum luzonicum ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1065 Score = 573 bits (289), Expect = e-160 Identities = 500/567 (88%), Gaps = 17/567 (2%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||||| || ||||||||||||||| Sbjct: 838 atctagaatatatctag-atgtgtgtgtctatttatctatattctatatttatagata-- 782 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 133 |||| || |||| ||||||| |||||||||| ||||||||||||||||||||||| Sbjct: 781 --tgtaatctttcttaacaaaaaatctccttatttt-actcttattgaatcgcggtaaag 725 Query: 134 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 193 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 724 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 665 Query: 194 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 248 ||||||| | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 664 atttatattataaccttaccaaataaggcaatttttttggtttgttccgccatcccaccc 605 Query: 249 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 308 |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 604 aatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgttccc 545 Query: 309 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 368 ||| ||||||||| |||| ||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 544 actacttctcctttaatgattaggtctgaatcccacaatggagcttccaaaaaatttctt 485 Query: 369 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 428 ||||||| ||||||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 484 tccgagtcaattttctcagttttattaacccgggccgctctttattattgttttaaattt 425 Query: 429 gtagttcttctttcaagttacaatttttcattctctatta-gttttattatattgatgct 487 ||| ||||| ||||||||||| |||| ||||||| ||| |||| || |||||||||| Sbjct: 424 gtatttcttgtttcaagttacgatttcgaattctctgttatttttttttttattgatgct 365 Query: 488 ttttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctt 547 || ||||||||||||||||||||||| |||||||||||||| | || ||| ||||||||| Sbjct: 364 ttatcacattgccttttatgatgtaactcatagaccatacatattgaaatcctatatctt 305 Query: 548 atttatttcctcttccttctttctatc 574 ||| ||||||||| ||||||||||| Sbjct: 304 tctta-ttcctcttctttctttctatc 279
>gb|AY912204.1| Greslania circinata ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1170 Score = 569 bits (287), Expect = e-159 Identities = 437/488 (89%), Gaps = 6/488 (1%) Strand = Plus / Minus Query: 92 aaaaaatatccttatttttactcttattgaatcgcggtaaagtattctaattcaataaga 151 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 789 aaaaaatctccttatttttactcttattgaatcgcggtaaagtattctaattcaataaag 730 Query: 152 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 206 ||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 729 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttatattataacctta 670 Query: 207 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 266 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 669 ccaaataaggcaattcttttggtttgttccgccatcccacccaatgaagtattaggattc 610 Query: 267 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 326 ||||||||||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 609 ttttcaataaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 550 Query: 327 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 386 ||||||||||||||| ||| ||||||||||| |||||||||||||||| |||||||||| Sbjct: 549 attaggtctgaatcccacaatggagcttccaataaatttctttccgagtcaattttctca 490 Query: 387 gttttattaacccgggcggctctttattattgcttaaaatttgtagttcttctttcaagt 446 ||||||||||||||| | ||||||| |||||| || ||||||||| ||||| |||||||| Sbjct: 489 gttttattaacccggtccgctctttgttattgttttaaatttgtatttcttgtttcaagt 430 Query: 447 tacaatttttcattctctattagttttattatattgatgctttttcacattgccttttat 506 || |||| ||||||| ||| |||| ||||||||||||||| |||||||||||||||| Sbjct: 429 tatgatttcgaattctctgttattttttttatattgatgctttatcacattgccttttat 370 Query: 507 gatgtaattcatagaccatacacagtggaattctatatcttatttatttcctcttccttc 566 ||||||| |||||||||||||| | |||||| ||||||||| ||| ||||||||| ||| Sbjct: 369 gatgtaactcatagaccatacatattggaatcctatatctttctta-ttcctcttctttc 311 Query: 567 tttctatc 574 |||||||| Sbjct: 310 tttctatc 303
>gb|AF133473.1|AF133473 Otatea acuminata ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1185 Score = 569 bits (287), Expect = e-159 Identities = 419/464 (90%), Gaps = 6/464 (1%) Strand = Plus / Minus Query: 116 tattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaatatttactct 175 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 758 tattgaatcgcggtaaagtattctaattcaataaagatttcgcgggcgaatatttactct 699 Query: 176 ttcctgtcttatttgttaatttata-----aacttaccaaataagacaannnnnnnggtt 230 ||||||||||||||||||||||||| | ||||||||||||| ||| |||| Sbjct: 698 ttcctgtcttatttgttaatttatattataaccttaccaaataaggcaatttttttggtt 639 Query: 231 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 290 |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | || Sbjct: 638 tgttccgccatcccacccaatgaagtattaggattcttttcaataaaatcctatgcagtc 579 Query: 291 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 350 ||||||||||||||||||||| ||||||||| ||||||||||||||||| || ||| ||| Sbjct: 578 ataggttctgtcgttcccactacttctcctttaatggttaggtctgaattccacaatgga 519 Query: 351 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 410 ||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||| Sbjct: 518 gcttccaaaaaatttctttccaagtcaattttctcagttttattaacccgggccgctctt 459 Query: 411 tattattgcttaaaatttgtagttcttctttcaagttacaatttttcattctctattagt 470 ||||||||||| ||||||||| ||||| |||| |||||| |||| ||||||| ||| | Sbjct: 458 tattattgcttcaaatttgtatttcttgtttcgagttacgatttcgaattctctgttatt 399 Query: 471 tttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacaca 530 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 398 tttattatattgatgctttatcacattgccttttatgatgtaattcatagaccatacata 339 Query: 531 gtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| ||||||||| ||| ||||||||| ||||||||||| Sbjct: 338 ttggaatcctatatctttctta-ttcctcttctttctttctatc 296 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/58 (89%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagata 75 |||||||||||||| || ||||||||| |||||||||| || ||||||||||||||| Sbjct: 813 atctagaatatatctag-atgtgtgtgtctatttatctatattctatatttatagata 757
>gb|U54749.1|OAU54749 Otatea acuminata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1025 Score = 569 bits (287), Expect = e-159 Identities = 419/464 (90%), Gaps = 6/464 (1%) Strand = Plus / Minus Query: 116 tattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaatatttactct 175 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 735 tattgaatcgcggtaaagtattctaattcaataaagatttcgcgggcgaatatttactct 676 Query: 176 ttcctgtcttatttgttaatttata-----aacttaccaaataagacaannnnnnnggtt 230 ||||||||||||||||||||||||| | ||||||||||||| ||| |||| Sbjct: 675 ttcctgtcttatttgttaatttatattataaccttaccaaataaggcaatttttttggtt 616 Query: 231 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 290 |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | || Sbjct: 615 tgttccgccatcccacccaatgaagtattaggattcttttcaataaaatcctatgcagtc 556 Query: 291 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 350 ||||||||||||||||||||| ||||||||| ||||||||||||||||| || ||| ||| Sbjct: 555 ataggttctgtcgttcccactacttctcctttaatggttaggtctgaattccacaatgga 496 Query: 351 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 410 ||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||| Sbjct: 495 gcttccaaaaaatttctttccaagtcaattttctcagttttattaacccgggccgctctt 436 Query: 411 tattattgcttaaaatttgtagttcttctttcaagttacaatttttcattctctattagt 470 ||||||||||| ||||||||| ||||| |||| |||||| |||| ||||||| ||| | Sbjct: 435 tattattgcttcaaatttgtatttcttgtttcgagttacgatttcgaattctctgttatt 376 Query: 471 tttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacaca 530 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 375 tttattatattgatgctttatcacattgccttttatgatgtaattcatagaccatacata 316 Query: 531 gtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| ||||||||| ||| ||||||||| ||||||||||| Sbjct: 315 ttggaatcctatatctttctta-ttcctcttctttctttctatc 273 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/58 (89%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagata 75 |||||||||||||| || ||||||||| |||||||||| || ||||||||||||||| Sbjct: 790 atctagaatatatctag-atgtgtgtgtctatttatctatattctatatttatagata 734
>gb|AF133474.1|AF133474 Poa pratensis ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1097 Score = 549 bits (277), Expect = e-153 Identities = 424/476 (89%), Gaps = 7/476 (1%) Strand = Plus / Minus Query: 106 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 165 |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| Sbjct: 783 tttttactcttattgaataatggtaaagtattctaattcaataaggatttcgcgggcgaa 724 Query: 166 tatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnn 225 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 723 tatttactctttcctgtcttatttgttaatttataaccttaccaaataagacaatttttt 664 Query: 226 nggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 285 |||||| ||||||||||||||||||||||| |||||||| |||| ||||||||||||| Sbjct: 663 tggtttgctccgccatcccacccaatgaagtattaggatttttttaaataaaatcctatt 604 Query: 286 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 345 |||||||||||| |||||||||||||||||||||||||||||||||| ||| || || Sbjct: 603 aaatcataggttccgtcgttcccactgcttctccttgaatggttaggttctaattccaca 544 Query: 346 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 405 | |||||||| ||||||| |||||||||||||||||||||||||||||||| |||| ||| Sbjct: 543 atggagcttcaaaaaaatatctttccgagttaattttctcagttttattaatccggtcgg 484 Query: 406 c-------tctttattattgcttaaaatttgtagttcttctttcaagttacaatttttca 458 | ||||||||||||||| |||||| ||||||| ||||||||||| |||| | | Sbjct: 483 ctctttattctttattattgctttaaatttagagttcttttttcaagttacgatttctaa 424 Query: 459 ttctctattagttttattatattgatgctttttcacattgccttttatgatgtaattcat 518 ||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||| Sbjct: 423 ttctctattagttttattatattgatgctttatcacattgttttttatgatgcaattcat 364 Query: 519 agaccatacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||||||| | |||||| |||||||||| ||| ||||||||||||||||||||| Sbjct: 363 agaccatacatattggaatcctatatcttacttaattcctcttccttctttctatc 308
>gb|AF133475.1|AF133475 Avena sativa ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1187 Score = 539 bits (272), Expect = e-150 Identities = 435/492 (88%), Gaps = 11/492 (2%) Strand = Plus / Minus Query: 94 aaaatatccttatttttactcttattgaatcgcg------gtaaagtattctaattcaat 147 |||||||| ||||||||||||||||||||| | |||||||||||||||| | Sbjct: 740 aaaatatctttatttttactcttattgaataatggtaatggtaaagtattctaattttaa 681 Query: 148 aagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatttataaacttac 207 ||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 680 aaggatttcgcgggcgaatatttactcttttctgtcttatttgttaatttataaccttac 621 Query: 208 caaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattct 267 ||||||||| || ||||||||||||||||| |||||||||||| |||||||||| Sbjct: 620 caaataagaaaatttttttggtttgttccgccatcctacccaatgaagtattaggattct 561 Query: 268 tttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatgg 327 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 560 tttcaataaaatcctatggaatcataggttctgtcgttcccactgcctctccttgaatgg 501 Query: 328 ttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctcag 387 |||||||||||| || ||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 500 ttaggtctgaattccacaatggagcttccaaaaaatttctttcccagttaattttctcag 441 Query: 388 ttttattaacccgggcggctctttattattgcttaaaatttgtagttcttctttcaa--- 444 ||||||||||| || |||||||||||||||||| |||||| |||||||| |||||| Sbjct: 440 ttttattaaccaggatggctctttattattgctttaaatttctagttcttgtttcaagtt 381 Query: 445 --gttacaatttttcattctctattagttttattatattgatgctttttcacattgcctt 502 ||||| |||| | |||||||||| |||||||||||||||||||| ||||||||| || Sbjct: 380 acgttacgatttctaattctctattttttttattatattgatgctttatcacattgcttt 321 Query: 503 ttatgatgtaattcatagaccatacacagtggaattctatatcttatttatttcctcttc 562 |||||||| ||||||||||||||||| | |||||| |||||||||| ||| | ||||||| Sbjct: 320 ttatgatgcaattcatagaccatacatattggaatcctatatcttacttaatccctcttc 261 Query: 563 cttctttctatc 574 ||||||||||| Sbjct: 260 tttctttctatc 249 Score = 42.1 bits (21), Expect = 2.0 Identities = 46/52 (88%), Gaps = 2/52 (3%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatat-ttatctaaatnctatattt 68 |||||||||||||| || ||||||||| ||| |||||||||| |||||||| Sbjct: 808 atctagaatatatctag-atgtgtgtgtctatattatctaaattctatattt 758
>ref|XM_481016.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2472 Score = 535 bits (270), Expect = e-149 Identities = 422/472 (89%), Gaps = 6/472 (1%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2458 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 2399 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 2398 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 2339 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 2338 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 2279 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 2278 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 2219 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 2218 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 2160 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 2159 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 2100 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 2099 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 2040 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 2039 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 1989
>ref|XM_481017.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2472 Score = 535 bits (270), Expect = e-149 Identities = 422/472 (89%), Gaps = 6/472 (1%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2458 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 2399 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 2398 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 2339 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 2338 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 2279 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 2278 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 2219 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 2218 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 2160 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 2159 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 2100 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 2099 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 2040 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 2039 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 1989
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 535 bits (270), Expect = e-149 Identities = 422/472 (89%), Gaps = 6/472 (1%) Strand = Plus / Plus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 78456 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 78515 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 78516 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 78575 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 78576 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 78635 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 78636 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 78695 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 78696 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 78754 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 78755 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 78814 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 78815 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 78874 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 78875 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 78925 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 78347 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 78405 Query: 61 ctatattta 69 ||||||||| Sbjct: 78406 ctatattta 78414
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 535 bits (270), Expect = e-149 Identities = 422/472 (89%), Gaps = 6/472 (1%) Strand = Plus / Plus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 78456 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 78515 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 78516 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 78575 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 78576 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 78635 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 78636 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 78695 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 78696 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 78754 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 78755 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 78814 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 78815 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 78874 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 78875 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 78925 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 78347 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 78405 Query: 61 ctatattta 69 ||||||||| Sbjct: 78406 ctatattta 78414
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 535 bits (270), Expect = e-149 Identities = 422/472 (89%), Gaps = 6/472 (1%) Strand = Plus / Plus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 78399 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 78458 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 78459 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 78518 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 78519 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 78578 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 78579 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 78638 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 78639 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 78697 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 78698 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 78757 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 78758 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 78817 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 78818 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 78868 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 78291 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 78349 Query: 61 ctatattta 69 ||||||||| Sbjct: 78350 ctatattta 78358
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 535 bits (270), Expect = e-149 Identities = 422/472 (89%), Gaps = 6/472 (1%) Strand = Plus / Plus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 54462 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 54521 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 54522 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 54581 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 54582 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 54641 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 54642 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 54701 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 54702 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 54760 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 54761 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 54820 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 54821 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 54880 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 54881 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 54931 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 54358 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 54416 Query: 61 ctatattta 69 ||||||||| Sbjct: 54417 ctatattta 54425
>gb|AC134345.2| Oryza sativa (jpaonica cultivar-group) chromosome 5 PAC clone P0012A07, complete sequence Length = 136858 Score = 535 bits (270), Expect = e-149 Identities = 422/472 (89%), Gaps = 6/472 (1%) Strand = Plus / Plus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 127290 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 127349 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 127350 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 127409 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 127410 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 127469 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 127470 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 127529 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 127530 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 127588 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 127589 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 127648 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 127649 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 127708 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 127709 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 127759 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 127186 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 127244 Query: 61 ctatattta 69 ||||||||| Sbjct: 127245 ctatattta 127253
>gb|DQ289153.1| Oryza glumipatula F ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1110 Score = 535 bits (270), Expect = e-149 Identities = 422/472 (89%), Gaps = 6/472 (1%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 760 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 701 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 700 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 641 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 640 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 581 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 580 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 521 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 520 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 462 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 461 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 402 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 401 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 342 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 341 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 291 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 865 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 807 Query: 61 ctatattta 69 ||||||||| Sbjct: 806 ctatattta 798
>gb|DQ289152.1| Oryza glumipatula E ribosomal protein L16 (ribosomal protein L16) gene, partial cds; chloroplast Length = 1109 Score = 535 bits (270), Expect = e-149 Identities = 422/472 (89%), Gaps = 6/472 (1%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 759 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 700 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 699 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 640 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 639 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 580 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 579 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 520 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 519 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 461 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 460 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 401 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 400 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 341 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 340 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 290 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 864 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 806 Query: 61 ctatattta 69 ||||||||| Sbjct: 805 ctatattta 797
>gb|DQ289151.1| Oryza meridionalis D ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1112 Score = 535 bits (270), Expect = e-149 Identities = 422/472 (89%), Gaps = 6/472 (1%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 759 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 700 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 699 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 640 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 639 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 580 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 579 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 520 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 519 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 461 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 460 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 401 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 400 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 341 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 340 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 290 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 867 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 809 Query: 61 ctatattta 69 ||||||||| Sbjct: 808 ctatattta 800
>gb|DQ289150.1| Oryza barthii C ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1106 Score = 535 bits (270), Expect = e-149 Identities = 422/472 (89%), Gaps = 6/472 (1%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 758 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 699 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 698 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 639 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 638 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 579 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 578 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 519 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 518 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 460 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 459 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 400 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 399 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 340 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 339 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 289 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 861 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 803 Query: 61 ctatattta 69 ||||||||| Sbjct: 802 ctatattta 794
>gb|DQ289148.1| Oryza sativa A ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1113 Score = 535 bits (270), Expect = e-149 Identities = 422/472 (89%), Gaps = 6/472 (1%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 759 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 700 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 699 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 640 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 639 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 580 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 579 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 520 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 519 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 461 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 460 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 401 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 400 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 341 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 340 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 290 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 868 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 810 Query: 61 ctatattta 69 ||||||||| Sbjct: 809 ctatattta 801
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 535 bits (270), Expect = e-149 Identities = 422/472 (89%), Gaps = 6/472 (1%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 14455243 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 14455184 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 14455183 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 14455124 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 14455123 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 14455064 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 14455063 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 14455004 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 14455003 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 14454945 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 14454944 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 14454885 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 14454884 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 14454825 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 14454824 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 14454774 Score = 323 bits (163), Expect = 4e-85 Identities = 307/352 (87%), Gaps = 6/352 (1%) Strand = Plus / Minus Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 11895328 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 11895269 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | |||||||||||||||||||||| |||||||||| ||||||||||| | |||| | ||| Sbjct: 11895268 agtcataggttctgtcgttcccacggcttctcctttaatggttaggttttaatctcacaa 11895209 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||| ||| || |||||||||||||||||| |||| | Sbjct: 11895208 tggagcttccaaaaaatttctttccaagtcaa-tttctcagttttattaactcgggacac 11895150 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 11895149 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 11895090 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 | ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 11895089 ttgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 11895030 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 11895029 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 11894979 Score = 165 bits (83), Expect = 2e-37 Identities = 86/87 (98%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 11895435 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 11895376 Query: 167 atttactctttcctgtcttatttgtta 193 ||||||||||||||||||||||||||| Sbjct: 11895375 atttactctttcctgtcttatttgtta 11895349 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 14455346 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 14455288 Query: 61 ctatattta 69 ||||||||| Sbjct: 14455287 ctatattta 14455279 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 11895535 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 11895477 Query: 61 ctatattta 69 ||||||||| Sbjct: 11895476 ctatattta 11895468
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 535 bits (270), Expect = e-149 Identities = 422/472 (89%), Gaps = 6/472 (1%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 9258613 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 9258554 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 9258553 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 9258494 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 9258493 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 9258434 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 9258433 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 9258374 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 9258373 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 9258315 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 9258314 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 9258255 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 9258254 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 9258195 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 9258194 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 9258144 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 9258714 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 9258656 Query: 61 ctatattta 69 ||||||||| Sbjct: 9258655 ctatattta 9258647
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 535 bits (270), Expect = e-149 Identities = 422/472 (89%), Gaps = 6/472 (1%) Strand = Plus / Plus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 12757003 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 12757062 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 12757063 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 12757122 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 12757123 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 12757182 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 12757183 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 12757242 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 12757243 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 12757301 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 12757302 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 12757361 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 12757362 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 12757421 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 12757422 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 12757472 Score = 458 bits (231), Expect = e-125 Identities = 415/473 (87%), Gaps = 8/473 (1%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 19544581 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 19544522 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||| ||||||||||||||||| |||| |||| |||||||||||| Sbjct: 19544521 atttactctttcatgtcttatttgttaattcataaccttatcaaataagacaattttttt 19544462 Query: 227 -ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 285 |||||||||||||||||||||||||||||| || ||||| ||||||| |||||||||| Sbjct: 19544461 tggtttgttccgccatcccacccaatgaagtattgggatttttttcaagaaaatcctatc 19544402 Query: 286 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 345 | |||||||||||||| |||||||||||||||||| ||||||||||| |||||| |||| Sbjct: 19544401 cagtcataggttctgtcattcccactgcttctcctttaatggttaggtttgaatctcgca 19544342 Query: 346 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 405 | |||||||||||||||||||||||||||| || |||||||| ||||||||| | || | Sbjct: 19544341 atggagcttccaaaaaatttctttccgagtcaa-tttctcag-tttattaactcaggacg 19544284 Query: 406 ctctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattc 461 |||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| |||| Sbjct: 19544283 ctctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattc 19544224 Query: 462 tctattagttttattatattgatgctttttcacattgccttttatgatgtaattcataga 521 | | ||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 19544223 tttgttatttttattatattgatgctttatcacattgctttttatgatgtaattcataga 19544164 Query: 522 ccatacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||||| | |||||| ||||||||| | | ||| |||||||||||||||||| Sbjct: 19544163 ccatacatattggaatcctatatctt-tcttttttctcttccttctttctatc 19544112 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 12756899 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 12756957 Query: 61 ctatattta 69 ||||||||| Sbjct: 12756958 ctatattta 12756966 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/52 (86%), Gaps = 1/52 (1%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatattta 69 |||||||||||||| || |||||| || |||||||||| || ||||||||| Sbjct: 19544664 atctagaatatatctag-atgtgtatgtttatttatctatattctatattta 19544614
>gb|AF133492.1|AF133492 Humbertochloa greenwayi ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1218 Score = 535 bits (270), Expect = e-149 Identities = 421/472 (89%), Gaps = 5/472 (1%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 769 ttttactcttattgaatcgcggtaaagtactctaattcaataaagatttcgcgggcgaat 710 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||| ||| Sbjct: 709 atttactctttcctgtcttatttgttaattcataaccttatcaaataaggcaactttttt 650 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||| Sbjct: 649 ggtttgttccgccatcccacccaatgaagtattaggattgttttcaaaaaaatcctatcc 590 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | |||||||||||||||||||||| |||||||||| ||||||||||| |||||| ||||| Sbjct: 589 agtcataggttctgtcgttcccacagcttctcctttaatggttaggtttgaatctcgcaa 530 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||| ||||||||||| |||||||||||||||||||||||||| || Sbjct: 529 tggagcttccaaaaaatatctttccgagtccattttctcagttttattaacccgggctgc 470 Query: 407 tctttattattgcttaaaatttgtagttcttctttcaag----ttacaatttttcattct 462 ||||| |||||||||| |||||||| ||||| |||||| |||| ||||| ||||| Sbjct: 469 tctttgttattgcttagaatttgtatttcttgtttcaatcaaattacgattttgaattct 410 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || || |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 409 ctgctatttttattatattgatgctttatcacattgccttttatgatgtaattcatagac 350 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 349 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 299 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/52 (88%), Gaps = 1/52 (1%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatattta 69 |||||||||||||| || ||||||||| |||||||||| || ||||||||| Sbjct: 861 atctagaatatatctag-atgtgtgtgtttatttatctatattctatattta 811
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 535 bits (270), Expect = e-149 Identities = 422/472 (89%), Gaps = 6/472 (1%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 69826 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 69767 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 69766 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 69707 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 69706 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 69647 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 69646 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 69587 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 69586 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 69528 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 69527 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 69468 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 69467 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 69408 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 69407 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 69357 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 69927 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 69869 Query: 61 ctatattta 69 ||||||||| Sbjct: 69868 ctatattta 69860
>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0465E03 Length = 151206 Score = 535 bits (270), Expect = e-149 Identities = 422/472 (89%), Gaps = 6/472 (1%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 147046 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 146987 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 146986 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 146927 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 146926 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 146867 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 146866 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 146807 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 146806 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 146748 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 146747 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 146688 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 146687 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 146628 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 146627 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 146577 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 147149 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 147091 Query: 61 ctatattta 69 ||||||||| Sbjct: 147090 ctatattta 147082
>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1585_D02 Length = 103172 Score = 535 bits (270), Expect = e-149 Identities = 422/472 (89%), Gaps = 6/472 (1%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 54808 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 54749 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 54748 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 54689 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 54688 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 54629 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 54628 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 54569 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 54568 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 54510 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 54509 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 54450 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 54449 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 54390 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 54389 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 54339 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 54911 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 54853 Query: 61 ctatattta 69 ||||||||| Sbjct: 54852 ctatattta 54844
>dbj|AK072149.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128P04, full insert sequence Length = 2475 Score = 535 bits (270), Expect = e-149 Identities = 422/472 (89%), Gaps = 6/472 (1%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2460 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 2401 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 2400 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 2341 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 2340 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 2281 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 2280 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 2221 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 2220 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 2162 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 2161 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 2102 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 2101 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 2042 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 2041 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 1991
>dbj|AK071967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084G06, full insert sequence Length = 1764 Score = 535 bits (270), Expect = e-149 Identities = 422/472 (89%), Gaps = 6/472 (1%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 491 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 432 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 431 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 372 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 371 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 312 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 311 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 252 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 251 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 193 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 192 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 133 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 132 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 73 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 72 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 22
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 535 bits (270), Expect = e-149 Identities = 422/472 (89%), Gaps = 6/472 (1%) Strand = Plus / Plus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 78396 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 78455 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 78456 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 78515 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 78516 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 78575 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 78576 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 78635 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 78636 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 78694 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 78695 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 78754 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 78755 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 78814 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 78815 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 78865 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 78291 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 78349 Query: 61 ctatattta 69 ||||||||| Sbjct: 78350 ctatattta 78358
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 527 bits (266), Expect = e-146 Identities = 421/472 (89%), Gaps = 6/472 (1%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 72298 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 72239 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 72238 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 72179 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 72178 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 72119 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 72118 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 72059 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 72058 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 72000 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| | || ||||| Sbjct: 71999 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgacttcgaattct 71940 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 71939 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 71880 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 71879 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 71829 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 72405 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 72347 Query: 61 ctatattta 69 ||||||||| Sbjct: 72346 ctatattta 72338
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 527 bits (266), Expect = e-146 Identities = 421/472 (89%), Gaps = 6/472 (1%) Strand = Plus / Plus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 76638 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 76697 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 76698 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 76757 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 76758 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 76817 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 76818 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 76877 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 76878 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 76936 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| | || ||||| Sbjct: 76937 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgacttcgaattct 76996 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 76997 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 77056 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 77057 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 77107 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 76536 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 76594 Query: 61 ctatattta 69 ||||||||| Sbjct: 76595 ctatattta 76603
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 527 bits (266), Expect = e-146 Identities = 421/472 (89%), Gaps = 6/472 (1%) Strand = Plus / Plus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 10702 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 10761 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 10762 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 10821 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 10822 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 10881 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 10882 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 10941 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 10942 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 11000 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| | || ||||| Sbjct: 11001 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgacttcgaattct 11060 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 11061 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 11120 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 11121 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 11171 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 10600 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 10658 Query: 61 ctatattta 69 ||||||||| Sbjct: 10659 ctatattta 10667
>gb|DQ289157.1| Oryza punctata J ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1116 Score = 527 bits (266), Expect = e-146 Identities = 421/472 (89%), Gaps = 6/472 (1%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 766 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 707 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||| ||| Sbjct: 706 atttactctttcctgtcttatttgttaattcataaccttatcaaataaggcaattttttt 647 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 646 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 587 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 586 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 527 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 526 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 468 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 467 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 408 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 407 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 348 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 347 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 297
>gb|DQ289156.1| Oryza grandiglumis I ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1117 Score = 527 bits (266), Expect = e-146 Identities = 421/472 (89%), Gaps = 6/472 (1%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 766 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 707 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||| ||| Sbjct: 706 atttactctttcctgtcttatttgttaattcataaccttatcaaataaggcaattttttt 647 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 646 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 587 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 586 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 527 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 526 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 468 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 467 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 408 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 407 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 348 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 347 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 297 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 872 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 814 Query: 61 ctatattta 69 ||||||||| Sbjct: 813 ctatattta 805
>gb|DQ289155.1| Oryza latifolia H ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1118 Score = 527 bits (266), Expect = e-146 Identities = 421/472 (89%), Gaps = 6/472 (1%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 765 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 706 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||| ||| Sbjct: 705 atttactctttcctgtcttatttgttaattcataaccttatcaaataaggcaattttttt 646 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 645 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 586 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 585 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 526 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 525 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 467 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 466 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 407 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 406 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 347 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 346 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 296 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 873 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 815 Query: 61 ctatattta 69 ||||||||| Sbjct: 814 ctatattta 806
>gb|DQ289154.1| Oryza officinalis G ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1118 Score = 527 bits (266), Expect = e-146 Identities = 421/472 (89%), Gaps = 6/472 (1%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 766 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 707 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||| ||| Sbjct: 706 atttactctttcctgtcttatttgttaattcataaccttatcaaataaggcaattttttt 647 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 646 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 587 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 586 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 527 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 526 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 468 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 467 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 408 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 407 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 348 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 347 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 297 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 873 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 815 Query: 61 ctatattta 69 ||||||||| Sbjct: 814 ctatattta 806
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 527 bits (266), Expect = e-146 Identities = 421/472 (89%), Gaps = 6/472 (1%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 9191225 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 9191166 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 9191165 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 9191106 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 9191105 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 9191046 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 9191045 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 9190986 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 9190985 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 9190927 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| | || ||||| Sbjct: 9190926 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgacttcgaattct 9190867 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 9190866 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 9190807 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 9190806 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 9190756 Score = 527 bits (266), Expect = e-146 Identities = 421/472 (89%), Gaps = 6/472 (1%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 9114272 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 9114213 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 9114212 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 9114153 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 9114152 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 9114093 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 9114092 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 9114033 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 9114032 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 9113974 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| | || ||||| Sbjct: 9113973 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgacttcgaattct 9113914 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 9113913 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 9113854 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 9113853 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 9113803 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 9191332 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 9191274 Query: 61 ctatattta 69 ||||||||| Sbjct: 9191273 ctatattta 9191265 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 9114379 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 9114321 Query: 61 ctatattta 69 ||||||||| Sbjct: 9114320 ctatattta 9114312
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 527 bits (266), Expect = e-146 Identities = 421/472 (89%), Gaps = 6/472 (1%) Strand = Plus / Plus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 10370246 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 10370305 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 10370306 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 10370365 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 10370366 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 10370425 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 10370426 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 10370485 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 10370486 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 10370544 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| | || ||||| Sbjct: 10370545 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgacttcgaattct 10370604 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 10370605 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 10370664 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 10370665 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 10370715 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 10370144 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 10370202 Query: 61 ctatattta 69 ||||||||| Sbjct: 10370203 ctatattta 10370211
>gb|AF133458.1|AF133458 Leersia virginica ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1209 Score = 527 bits (266), Expect = e-146 Identities = 421/472 (89%), Gaps = 6/472 (1%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 747 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 688 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 687 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 628 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||| | ||||||| |||||||||| Sbjct: 627 ggtttgttccgccatcccacccaatgaagtattgggacttttttcaagaaaatcctatcc 568 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 567 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 508 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || ||||||||||||||||||||||| || Sbjct: 507 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaacccgggacgc 449 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||||||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 448 tctttgttattgcttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 389 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| ||||||| |||||||||||||| Sbjct: 388 ctgttatttttattatattgatgctttatcacattgctttttatggtgtaattcatagac 329 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 328 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 278 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/60 (88%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || |||||| || |||||||||| || ||||||||||||||||| Sbjct: 845 atctagaatatatctag-atgtgtatgtttatttatctatattctatatttatagataat 787
>dbj|AK104024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-E05, full insert sequence Length = 485 Score = 527 bits (266), Expect = e-146 Identities = 421/472 (89%), Gaps = 6/472 (1%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 484 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 425 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 424 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 365 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 364 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 305 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 304 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 245 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 244 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 186 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| | ||| || |||| |||| |||| ||||| Sbjct: 185 tctttgttattccttgaaatttgtattccttgtttcaatcaaattacgatttcgaattct 126 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 125 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 66 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 65 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 15
>dbj|AK058501.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-F04, full insert sequence Length = 547 Score = 527 bits (266), Expect = e-146 Identities = 421/472 (89%), Gaps = 6/472 (1%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 532 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 473 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 472 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 413 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 412 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 353 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 352 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 293 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || ||||||||||||| |||| |||| || Sbjct: 292 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttactaactcgggacgc 234 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 233 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 174 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 173 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 114 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 113 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 63
>gb|DQ289149.1| Oryza sativa ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1103 Score = 527 bits (266), Expect = e-146 Identities = 421/472 (89%), Gaps = 6/472 (1%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 758 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 699 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 698 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 639 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 638 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 579 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 578 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 519 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 518 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 460 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||| | Sbjct: 459 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattat 400 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 399 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 340 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 339 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 289 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 858 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 800 Query: 61 ctatattta 69 ||||||||| Sbjct: 799 ctatattta 791
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 527 bits (266), Expect = e-146 Identities = 421/472 (89%), Gaps = 6/472 (1%) Strand = Plus / Plus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 10376285 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 10376344 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 10376345 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 10376404 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 10376405 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 10376464 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 10376465 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 10376524 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 10376525 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 10376583 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| | || ||||| Sbjct: 10376584 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgacttcgaattct 10376643 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 10376644 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 10376703 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 10376704 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 10376754 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 10376183 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 10376241 Query: 61 ctatattta 69 ||||||||| Sbjct: 10376242 ctatattta 10376250
>ref|XM_479425.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2380 Score = 519 bits (262), Expect = e-144 Identities = 420/472 (88%), Gaps = 6/472 (1%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2366 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 2307 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 2306 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 2247 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 2246 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 2187 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 2186 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 2127 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| | Sbjct: 2126 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggactc 2068 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| |||||| || ||||| || |||| |||| |||| ||||| Sbjct: 2067 tctttgttattccttgaaatttttatttcttgtttcaatcaaattacgatttcgaattct 2008 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 2007 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 1948 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 1947 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 1897
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 519 bits (262), Expect = e-144 Identities = 421/472 (89%), Gaps = 7/472 (1%) Strand = Plus / Plus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 78444 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 78503 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 78504 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 78563 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 78564 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 78623 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 78624 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 78683 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 78684 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 78742 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 78743 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 78802 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 78803 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 78862 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | | |||| ||||||||| |||||| |||||||||||||||||| Sbjct: 78863 catacata-ttgaatcctatatctttcttattt-ctcttccttctttctatc 78912 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 78335 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 78393 Query: 61 ctatattta 69 ||||||||| Sbjct: 78394 ctatattta 78402
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 519 bits (262), Expect = e-144 Identities = 420/472 (88%), Gaps = 6/472 (1%) Strand = Plus / Plus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 27923930 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 27923989 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 27923990 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 27924049 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 27924050 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 27924109 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 27924110 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 27924169 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| | Sbjct: 27924170 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggactc 27924228 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| |||||| || ||||| || |||| |||| |||| ||||| Sbjct: 27924229 tctttgttattccttgaaatttttatttcttgtttcaatcaaattacgatttcgaattct 27924288 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 27924289 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 27924348 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 27924349 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 27924399 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 27923830 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 27923888 Query: 61 ctatattta 69 ||||||||| Sbjct: 27923889 ctatattta 27923897
>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E03 Length = 159980 Score = 519 bits (262), Expect = e-144 Identities = 420/472 (88%), Gaps = 6/472 (1%) Strand = Plus / Plus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 87288 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 87347 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 87348 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 87407 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 87408 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 87467 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 87468 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 87527 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| | Sbjct: 87528 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggactc 87586 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| |||||| || ||||| || |||| |||| |||| ||||| Sbjct: 87587 tctttgttattccttgaaatttttatttcttgtttcaatcaaattacgatttcgaattct 87646 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 87647 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 87706 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 87707 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 87757 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 87188 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 87246 Query: 61 ctatattta 69 ||||||||| Sbjct: 87247 ctatattta 87255
>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1343_D04 Length = 143407 Score = 519 bits (262), Expect = e-144 Identities = 420/472 (88%), Gaps = 6/472 (1%) Strand = Plus / Plus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 13264 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 13323 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 13324 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 13383 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 13384 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 13443 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 13444 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 13503 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| | Sbjct: 13504 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggactc 13562 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| |||||| || ||||| || |||| |||| |||| ||||| Sbjct: 13563 tctttgttattccttgaaatttttatttcttgtttcaatcaaattacgatttcgaattct 13622 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 13623 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 13682 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 13683 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 13733 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 13164 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 13222 Query: 61 ctatattta 69 ||||||||| Sbjct: 13223 ctatattta 13231
>gb|U54750.1|RPU54750 Rhipidocladum pittieri ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1010 Score = 519 bits (262), Expect = e-144 Identities = 403/451 (89%), Gaps = 6/451 (1%) Strand = Plus / Minus Query: 129 taaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatt 188 ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 726 taaagtattctaattcaataaagatttcgcgggcgaatatttactctttcctgccttatt 667 Query: 189 tgttaatttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcc 243 |||||||||||| | ||||||||||||| ||| ||||||||||||||||| Sbjct: 666 tgttaatttatattataaccttaccaaataaggcaatttttttggtttgttccgccatcc 607 Query: 244 cacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcg 303 ||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 606 cacccaatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcg 547 Query: 304 ttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaat 363 |||||||| ||||||||| ||||||||||||||||| || ||| |||||||||||||||| Sbjct: 546 ttcccactacttctcctttaatggttaggtctgaattccacaatggagcttccaaaaaat 487 Query: 364 ttctttccgagttaattttctcagttttattaacccgggcggctctttattattgcttaa 423 |||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 486 ttctttccgagtcaattttctcagttttattaaccccggacgctctttattattgcttaa 427 Query: 424 aatttgtagttcttctttcaagttacaatttttcattctctattagttttattatattga 483 ||||| || ||||| |||| |||||| |||| |||| || ||| |||||||||||||| Sbjct: 426 aatttctatttcttgtttcgagttacgatttcgaattcgctgttatttttattatattga 367 Query: 484 tgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaattctata 543 |||||| |||||||||||||||||||||||||||||||||||||| | |||||| ||||| Sbjct: 366 tgctttatcacattgccttttatgatgtaattcatagaccatacatattggaatcctata 307 Query: 544 tcttatttatttcctcttccttctttctatc 574 |||| ||| ||||||||| ||||||||||| Sbjct: 306 tctttctta-ttcctcttctttctttctatc 277 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/52 (88%), Gaps = 1/52 (1%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatattta 69 |||||||||||||| || ||||||||| |||||||||| || ||||||||| Sbjct: 775 atctagaatatatctag-atgtgtgtgtctatttatctatattctatattta 725
>gb|AY847073.1| Danthonia spicata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1114 Score = 517 bits (261), Expect = e-143 Identities = 331/354 (93%), Gaps = 2/354 (0%) Strand = Plus / Minus Query: 153 tttcgcgggcgaatatttactcttt-cctgtcttatttgttaatttataaacttaccaaa 211 ||||||||||||||||| ||||||| |||||||| ||||||||||||||| ||||||||| Sbjct: 635 tttcgcgggcgaatatt-actcttttcctgtcttttttgttaatttataaccttaccaaa 577 Query: 212 taagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttc 271 |||||||| |||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 576 taagacaatttttttggtttgttccgccatcccacccaatgaagtattaggattcttttc 517 Query: 272 aataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatggttag 331 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 516 aataaaatcctatggagtcataggttctgtcgttcccactgcttctccttgaatggttag 457 Query: 332 gtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctcagtttt 391 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 456 gtctgaatcccgcaatggagcttccaaaaaatttctttccgagttaattttctcagtttt 397 Query: 392 attaacccgggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaa 451 |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| | Sbjct: 396 attaacccgggcggctctttattattgctttaaatttgtagttcttgtttcaagttacga 337 Query: 452 tttttcattctctattagttttattatattgatgctttttcacattgcctttta 505 ||| ||||||| ||| |||||||||||||||||||| ||||||||||||||| Sbjct: 336 tttcgaattctctgttatttttattatattgatgctttatcacattgcctttta 283 Score = 87.7 bits (44), Expect = 4e-14 Identities = 47/48 (97%) Strand = Plus / Minus Query: 92 aaaaaatatccttatttttactcttattgaatcgcggtaaagtattct 139 ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 682 aaaaaatctccttatttttactcttattgaatcgcggtaaagtattct 635 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 554 ttcctcttccttctttctatc 574 ||||||||||||||||||||| Sbjct: 252 ttcctcttccttctttctatc 232
>gb|AF133485.1|AF133485 Arundo donax ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1207 Score = 511 bits (258), Expect = e-142 Identities = 430/490 (87%), Gaps = 16/490 (3%) Strand = Plus / Minus Query: 100 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 159 |||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||| Sbjct: 791 tccttatttttactcttattgaatcgtggtaaagtattctaatccaataaagatttcgcg 732 Query: 160 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 219 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 731 ggcgaatatttactctttcctgtcttatttgttaatttataaccttaccaaataaagcaa 672 Query: 220 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 279 |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 671 tttttttggtttgttccgccatcccacccaatgaagtattaggattcttttcaataaaat 612 Query: 280 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 339 |||||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 611 cctatgtagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaat 552 Query: 340 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 399 || |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 551 cctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc 492 Query: 400 gggcggctc-------tttattattgcttaaaatttgtagttcttctttcaagttacaat 452 |||| |||| ||||||||||||| |||||| | || || ||||||||||| || Sbjct: 491 gggctgctccttattatttattattgctttaaattttgattttttatttcaagttacgat 432 Query: 453 ttttcattctctattagttttatt--------atattgatgctttttcacattgcctttt 504 || ||||||| ||| ||||||| ||||||||||||| |||||||||||||| Sbjct: 431 ttcgaattctctcttatttttattattttattatattgatgctttatcacattgcctttt 372 Query: 505 atgatgtaattcatagaccatacacagtggaattctatatcttatttatttcctcttcct 564 |||||||||||||||||||||||||| |||||| ||||||||| ||| ||| ||||||| Sbjct: 371 atgatgtaattcatagaccatacacattggaatcctatatctttctta-ttcttcttcct 313 Query: 565 tctttctatc 574 ||| |||||| Sbjct: 312 tctgtctatc 303
>gb|AY912201.1| Cathariostachys capitata ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1202 Score = 507 bits (256), Expect = e-140 Identities = 489/566 (86%), Gaps = 14/566 (2%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||| | |||||||||| || ||||||||||||||||| Sbjct: 838 atctagaatatatctag-atgtgtgggtctatttatctatattctatatttatagataat 780 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 133 ||| || |||| ||||||| |||||||||||||||| |||||||||||| ||| Sbjct: 779 ---gtaatctttcttaacaaaaaatctccttatttttactctgattgaatcgcgggcaag 723 Query: 134 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 193 |||||||||||||||| ||||||||||||||||| |||||| |||||||| |||||||| Sbjct: 722 tattctaattcaataaagatttcgcgggcgaatatctactctctcctgtctcatttgtta 663 Query: 194 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 248 || |||| | |||| |||||||| ||| || ||||||||||||||||||| Sbjct: 662 atctatatcataaccttatcaaataaggcaattattttggnttgttccgccatcccaccc 603 Query: 249 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 308 |||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 602 aatgaagtattaggattcttttcaataaaatcctatgcaggcataggttctgtcgttccc 543 Query: 309 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 368 ||| ||||||||| ||||| |||||||||||||| ||| ||||||||||||||||||||| Sbjct: 542 actacttctcctttaatggataggtctgaatcccacaatggagcttccaaaaaatttctt 483 Query: 369 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 428 ||||||| ||||||||||| ||||||||||||||| ||||||||||||||||| |||||| Sbjct: 482 tccgagtcaattttctcaggtttattaacccgggccgctctttattattgctttaaattt 423 Query: 429 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 488 | | ||||| ||||||||||| |||| || |||| | | ||||||||||||||||||| Sbjct: 422 ggatttcttgtttcaagttacgatttcgaatgctctgtgatttttattatattgatgctt 363 Query: 489 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 548 | ||||||||| ||||||||||||| |||||| ||||||| | |||||| ||||||||| Sbjct: 362 tatcacattgctttttatgatgtaactcataggccatacatattggaatcctatatcttt 303 Query: 549 tttatttcctcttccttctttctatc 574 ||| ||||||||| ||||||||||| Sbjct: 302 ctta-ttcctcttctttctttctatc 278
>gb|AY847074.1| Merxmuellera macowanii ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1077 Score = 505 bits (255), Expect = e-140 Identities = 401/453 (88%), Gaps = 8/453 (1%) Strand = Plus / Minus Query: 100 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 159 ||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||| Sbjct: 746 tccttatttttactcttattgaatcatggtaaagtattctaatccaataaagatttcgcg 687 Query: 160 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 219 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 686 ggcgaatatttactctttcctgtcttatttgttaatttataaccttaccaaataaagcaa 627 Query: 220 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 279 |||||||||||||||||||||||||||||| |||||||||||||||| ||||| Sbjct: 626 ttttgggggtttgttccgccatcccacccaatgaagtattaggattcttttcaagaaaat 567 Query: 280 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 339 |||||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 566 cctatgcagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaat 507 Query: 340 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 399 || |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 506 cctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc 447 Query: 400 gggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcat 459 |||| ||||||||||||| ||| |||||| || || || |||||||||| |||| || Sbjct: 446 gggctgctctttattatttctttaaatttttatttattgtttcaagttatgatttcaaat 387 Query: 460 tctctattagttttatt--------atattgatgctttttcacattgccttttatgatgt 511 ||||| || ||||||| ||||||||||||| ||||||||||||||||||||| Sbjct: 386 tctctcttttttttattattttattatattgatgctttatcacattgccttttatgatgt 327 Query: 512 aattcatagaccatacacagtggaattctatat 544 ||||||||||||||||||| |||||| |||||| Sbjct: 326 aattcatagaccatacacattggaatcctatat 294
>gb|AY912206.1| Hickelia madagascariensis ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1108 Score = 504 bits (254), Expect = e-139 Identities = 394/441 (89%), Gaps = 13/441 (2%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||||| || ||||||||||||||||| Sbjct: 836 atctagaatatatctag-atgtgtgtgtctatttatctatattctatatttatagataat 778 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 133 ||| || |||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 777 ---gtaatctttcttaacaaaaaatctccttatttttactcttattgaatcgcggtaaag 721 Query: 134 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 193 |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 720 tattctaattcaataaagatttcgcgggcgaaaatttactctttcctgtcttatttgtta 661 Query: 194 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 248 ||||||| | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 660 atttatattataaccttaccaaataaggcaatttttttggtttgttccgccatcccaccc 601 Query: 249 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 308 |||||||| |||||||||||||||| ||||||||||| | ||||||||| |||||||||| Sbjct: 600 aatgaagtattaggattcttttcaagaaaatcctatgcagtcataggttttgtcgttccc 541 Query: 309 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 368 ||| ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 540 actacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaaatttctt 481 Query: 369 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 428 ||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 480 tccgagtcaattttctcagttttattaacccgggcggctctttattattgttttaaattt 421 Query: 429 gtagttcttctttcaagttac 449 ||| ||||| ||||||||||| Sbjct: 420 gtatttcttgtttcaagttac 400 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 487 tttttcacattgccttttatgatgtaattcatagaccatacacagtggaat 537 ||||||||||||| ||||||||||||| |||||||||||||| | |||||| Sbjct: 347 tttttcacattgctttttatgatgtaactcatagaccatacatattggaat 297
>gb|DQ289158.1| Oryza australiensis k ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1117 Score = 504 bits (254), Expect = e-139 Identities = 418/472 (88%), Gaps = 6/472 (1%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 769 ttttactcttattgaatcgcggtaaagtattttaattcaataaaaatttcgcgggcgaat 710 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||| ||| Sbjct: 709 atttactctttcctgtcttatttgttaattcataaccttatcaaataaggcaattttttt 650 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 649 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 590 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 589 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatttcgcaa 530 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 529 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 471 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 470 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 411 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 410 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 351 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| ||||||||| |||||||| Sbjct: 350 catacatattggaatcctatatctttcttattt-ctcttccttgtttctatc 300 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 872 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 814 Query: 61 ctatattta 69 ||||||||| Sbjct: 813 ctatattta 805
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 504 bits (254), Expect = e-139 Identities = 418/472 (88%), Gaps = 6/472 (1%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 23180661 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 23180602 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| | |||||||||| Sbjct: 23180601 atttactctttcctgtcttatttgttaattcataaccttatcgaataagacaattttttt 23180542 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 23180541 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 23180482 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | | ||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 23180481 agtaataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 23180422 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || ||||||| |||||||||| |||| || Sbjct: 23180421 tggagcttccaaaaaatttctttccgagtcaa-tttctcacttttattaactcgggacgc 23180363 Query: 407 tctttattattgcttaaaatttgtagttc----ttctttcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||| ||| |||| |||| |||| ||||| Sbjct: 23180362 tctttgttattccttgaaatttgtatttctcgtttcaatcaaattacgatttcgaattct 23180303 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 23180302 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 23180243 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 23180242 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 23180192 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 23180761 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 23180703 Query: 61 ctatattta 69 ||||||||| Sbjct: 23180702 ctatattta 23180694
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 504 bits (254), Expect = e-139 Identities = 418/472 (88%), Gaps = 6/472 (1%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 131309 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 131250 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| | |||||||||| Sbjct: 131249 atttactctttcctgtcttatttgttaattcataaccttatcgaataagacaattttttt 131190 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 131189 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 131130 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | | ||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 131129 agtaataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 131070 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || ||||||| |||||||||| |||| || Sbjct: 131069 tggagcttccaaaaaatttctttccgagtcaa-tttctcacttttattaactcgggacgc 131011 Query: 407 tctttattattgcttaaaatttgtagttc----ttctttcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||| ||| |||| |||| |||| ||||| Sbjct: 131010 tctttgttattccttgaaatttgtatttctcgtttcaatcaaattacgatttcgaattct 130951 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 130950 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 130891 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 130890 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 130840 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 131409 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 131351 Query: 61 ctatattta 69 ||||||||| Sbjct: 131350 ctatattta 131342
>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0642B07 Length = 139297 Score = 504 bits (254), Expect = e-139 Identities = 418/472 (88%), Gaps = 6/472 (1%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 15423 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 15364 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| | |||||||||| Sbjct: 15363 atttactctttcctgtcttatttgttaattcataaccttatcgaataagacaattttttt 15304 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 15303 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 15244 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | | ||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 15243 agtaataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 15184 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || ||||||| |||||||||| |||| || Sbjct: 15183 tggagcttccaaaaaatttctttccgagtcaa-tttctcacttttattaactcgggacgc 15125 Query: 407 tctttattattgcttaaaatttgtagttc----ttctttcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||| ||| |||| |||| |||| ||||| Sbjct: 15124 tctttgttattccttgaaatttgtatttctcgtttcaatcaaattacgatttcgaattct 15065 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 15064 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 15005 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 15004 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 14954 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 15523 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 15465 Query: 61 ctatattta 69 ||||||||| Sbjct: 15464 ctatattta 15456
>gb|AY847081.1| Phragmites australis ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1166 Score = 500 bits (252), Expect = e-138 Identities = 422/479 (88%), Gaps = 9/479 (1%) Strand = Plus / Minus Query: 103 ttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggc 162 ||||||||||||||||||||||| | |||||||||||||| |||||| ||||||||||| Sbjct: 745 ttatttttactcttattgaatcgtg-taaagtattctaatccaataaagatttcgcgggc 687 Query: 163 gaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannn 222 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 686 gaatatttactctttcctgtcttatttgttaatttataaccttaccaaataagacaattt 627 Query: 223 nnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcct 282 |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 626 ttttggtttgttccgccatcccacccaatgaagtattaggattcttttgaataaaatcct 567 Query: 283 atggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatccc 342 ||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| Sbjct: 566 atgcagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcct 507 Query: 343 gcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccggg 402 |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 506 gcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttattaaccccgg 447 Query: 403 cggctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcattct 462 |||| |||||||||||| || ||| || || ||||||||||| |||| ||||| Sbjct: 446 ttgctccttattattgctttaatttttgtttttttgtttcaagttacgatttcgaattct 387 Query: 463 ctattagtt-------ttattatattgatgctttttcacattgccttttatgatgtaatt 515 || ||| || |||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 386 cttttattttattattttattatattgatgctttatcacattgccttttatgatgtaatt 327 Query: 516 catagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||||||||||||| |||||| ||||||||| ||| ||| |||||||||| |||||| Sbjct: 326 catagaccatacacattggaatcctatatctttctta-ttcttcttccttctatctatc 269
>gb|DQ289159.1| Oryza granulata L ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1142 Score = 498 bits (251), Expect = e-137 Identities = 422/477 (88%), Gaps = 12/477 (2%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 764 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 705 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaa-----taagacaann 221 |||||||||||||||||||||||||||||| |||| |||| |||| |||| ||| Sbjct: 704 atttactctttcctgtcttatttgttaattcataaccttatcaaatcaaataaggcaatt 645 Query: 222 nnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcc 281 ||||||||||||||||||||| |||||||| || ||||||||||||| ||||||| Sbjct: 644 tttttggtttgttccgccatcccacc-aatgaagtattgggattcttttcaagaaaatcc 586 Query: 282 tatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcc 341 ||| | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 585 tatccagtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatct 526 Query: 342 cgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgg 401 ||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 525 cgcaatggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaacccgg 467 Query: 402 gcggctctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttc 457 | ||||||| ||||||||| ||||||||| ||||| || |||| |||| |||| Sbjct: 466 gacgctctttgttattgcttgaaatttgtatttcttgtttcaatcaaattacgatttcga 407 Query: 458 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 517 ||||||| ||| |||||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 406 attctctgttatttttattatattgatgctttatcacattgctttttatgatgtaattca 347 Query: 518 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||||||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 346 tagaccatacatattggaatcctatatctttcttattt-ctcttccttctttctatc 291
>gb|AF133462.1|AF133462 Pariana radiciflora ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1262 Score = 498 bits (251), Expect = e-137 Identities = 431/487 (88%), Gaps = 10/487 (2%) Strand = Plus / Minus Query: 92 aaaaaatatccttatttttactcttattgaatcgcggtaaagtattct--aattc--aat 147 ||||||| ||||||||| ||||||||||||||||||||||||||||| ||||| ||| Sbjct: 787 aaaaaatctccttatttg-actcttattgaatcgcggtaaagtattctttaattcttaat 729 Query: 148 aagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatttataaacttac 207 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 728 aaggatttcgcgggcgaatatttactctttcctgtcttatttgttaatttataacctta- 670 Query: 208 caaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattct 267 |||||| ||| |||||||||||||||||||||||||||||| |||| ||||| Sbjct: 669 --aataagncaatttttttggtttgttccgccatcccacccaatgaagtattagaattct 612 Query: 268 tttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatgg 327 || ||| ||||||||||| | ||||||| ||| ||||||||||| ||||||||| ||||| Sbjct: 611 ttccaaaaaaatcctatgcagtcataggctctatcgttcccactacttctcctttaatgg 552 Query: 328 ttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctcag 387 ||||||||||||||| ||| ||||||| |||||||||||||||||||| ||||||||||| Sbjct: 551 ttaggtctgaatcccacaatggagctttcaaaaaatttctttccgagtcaattttctcag 492 Query: 388 ttttattaacccgggcggctctttattattgcttaaaatttgtagttcttctttcaagtt 447 |||| |||||||| || ||||||||||||||||| ||||||||| ||||| ||||||||| Sbjct: 491 tttttttaacccgagctgctctttattattgcttcaaatttgtatttcttgtttcaagtt 432 Query: 448 acaatttttcattctctattagttttattatattgatgctttttcacattgccttttatg 507 || |||| ||||||||||| |||| ||||||||||||||| | ||||||||||||||| Sbjct: 431 acgatttcaaattctctattattttt-ttatattgatgctttattacattgccttttatg 373 Query: 508 atgtaattcatagaccatacacagtggaattctatatcttatttatttcctcttccttct 567 |||||| |||||||||||||| | |||||| ||||||||| ||||| ||||||| |||| Sbjct: 372 atgtaactcatagaccatacatattggaatcctatatctttcttatt-cctcttctttct 314 Query: 568 ttctatc 574 ||||||| Sbjct: 313 ttctatc 307 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/61 (88%), Gaps = 1/61 (1%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || |||| |||| |||||||||| || ||||||||||||||||| Sbjct: 866 atctagaatatatctag-atgtctgtgtctatttatctatattctatatttatagataat 808 Query: 78 a 78 | Sbjct: 807 a 807
>gb|U54740.1|PRU54740 Pariana radiciflora ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1102 Score = 498 bits (251), Expect = e-137 Identities = 431/487 (88%), Gaps = 10/487 (2%) Strand = Plus / Minus Query: 92 aaaaaatatccttatttttactcttattgaatcgcggtaaagtattct--aattc--aat 147 ||||||| ||||||||| ||||||||||||||||||||||||||||| ||||| ||| Sbjct: 764 aaaaaatctccttatttg-actcttattgaatcgcggtaaagtattctttaattcttaat 706 Query: 148 aagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatttataaacttac 207 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 705 aaggatttcgcgggcgaatatttactctttcctgtcttatttgttaatttataacctta- 647 Query: 208 caaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattct 267 |||||| ||| |||||||||||||||||||||||||||||| |||| ||||| Sbjct: 646 --aataagncaatttttttggtttgttccgccatcccacccaatgaagtattagaattct 589 Query: 268 tttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatgg 327 || ||| ||||||||||| | ||||||| ||| ||||||||||| ||||||||| ||||| Sbjct: 588 ttccaaaaaaatcctatgcagtcataggctctatcgttcccactacttctcctttaatgg 529 Query: 328 ttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctcag 387 ||||||||||||||| ||| ||||||| |||||||||||||||||||| ||||||||||| Sbjct: 528 ttaggtctgaatcccacaatggagctttcaaaaaatttctttccgagtcaattttctcag 469 Query: 388 ttttattaacccgggcggctctttattattgcttaaaatttgtagttcttctttcaagtt 447 |||| |||||||| || ||||||||||||||||| ||||||||| ||||| ||||||||| Sbjct: 468 tttttttaacccgagctgctctttattattgcttcaaatttgtatttcttgtttcaagtt 409 Query: 448 acaatttttcattctctattagttttattatattgatgctttttcacattgccttttatg 507 || |||| ||||||||||| |||| ||||||||||||||| | ||||||||||||||| Sbjct: 408 acgatttcaaattctctatta-tttttttatattgatgctttattacattgccttttatg 350 Query: 508 atgtaattcatagaccatacacagtggaattctatatcttatttatttcctcttccttct 567 |||||| |||||||||||||| | |||||| ||||||||| ||| ||||||||| |||| Sbjct: 349 atgtaactcatagaccatacatattggaatcctatatctttctta-ttcctcttctttct 291 Query: 568 ttctatc 574 ||||||| Sbjct: 290 ttctatc 284 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/61 (88%), Gaps = 1/61 (1%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || |||| |||| |||||||||| || ||||||||||||||||| Sbjct: 843 atctagaatatatctag-atgtctgtgtctatttatctatattctatatttatagataat 785 Query: 78 a 78 | Sbjct: 784 a 784
>gb|AY847095.1| Megastachya mucronata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1154 Score = 492 bits (248), Expect = e-136 Identities = 400/451 (88%), Gaps = 4/451 (0%) Strand = Plus / Minus Query: 100 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 159 ||||| |||||| ||||||||||||| | |||||||||||||| |||||| |||||||| Sbjct: 748 tccttttttttattcttattgaatcgtg-taaagtattctaatccaataaagatttcgcg 690 Query: 160 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 219 ||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||| Sbjct: 689 ggcgaatatttactctttcctgtcttatttgttaatttaaaaccttaccaaataaaacaa 630 Query: 220 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 279 |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 629 tttttttggtttgttccgccatcccacccaatgaagtattaggattcttttcaataaaat 570 Query: 280 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 339 |||||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 569 cctatgcagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaat 510 Query: 340 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 399 || |||| |||||||||||||||||| ||||||||| |||||||||||||||||||| || Sbjct: 509 cctgcaatggagcttccaaaaaatttatttccgagtcaattttctcagttttattaatcc 450 Query: 400 gggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcat 459 ||| ||||||| ||||||||| |||||| || || || ||| ||||||| |||| || Sbjct: 449 cggctgctcttttttattgctttaaatttttatttattgtttgaagttacgatttcgaat 390 Query: 460 tctctattagtttt---attatattgatgctttttcacattgccttttatgatgtaattc 516 ||||| || |||| |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 389 tctctcttttttttataattatattgatgctttatcacattgccttttatgatgtaattc 330 Query: 517 atagaccatacacagtggaattctatatctt 547 |||||||||||||| |||||| ||||||||| Sbjct: 329 atagaccatacacattggaatcctatatctt 299
>gb|AY847088.1| Loudetia simplex ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1028 Score = 480 bits (242), Expect = e-132 Identities = 417/475 (87%), Gaps = 7/475 (1%) Strand = Plus / Minus Query: 100 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 159 |||||||||||| ||||||||||||| | |||||||||||||| |||||| |||||||| Sbjct: 705 tccttatttttattcttattgaatcgtgataaagtattctaatccaataaagatttcgcg 646 Query: 160 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 219 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 645 ggcgaatatttactctttcctgtcttatttgttaatttataaccttaccaaataaagcaa 586 Query: 220 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 279 |||||||||||||||||||||||||||||| ||||||||||||| || ||||| Sbjct: 585 gttttttggtttgttccgccatcccacccaatgaagtattaggattctttttaaaaaaat 526 Query: 280 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 339 |||||| | ||||||||| |||||||||||| ||||||| || ||||||||||| ||||| Sbjct: 525 cctatgcagtcataggttttgtcgttcccacagcttctcttttaatggttaggtttgaat 466 Query: 340 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 399 || |||| |||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 465 cctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttatcaaccg 406 Query: 400 gggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcat 459 |||| ||||||| ||||||||| || || || || ||||||||| | | || || | Sbjct: 405 gggctgctcttttttattgctttaattt-----tttttgtttcaagtttcgaattctctt 351 Query: 460 tctctattagttttattatattgatgctttttcacattgccttttatgatgtaattcata 519 | | ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 350 tttttatta-ttttattatattgatgctttatcacattgccttttatgatgtaattcata 292 Query: 520 gaccatacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||||||||| |||||| ||||||||| ||| ||| |||||||||| |||||| Sbjct: 291 gaccatacacattggaatcctatatctttctta-ttcgtcttccttctatctatc 238
>gb|AF133463.1|AF133463 Sucrea maculata ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1190 Score = 474 bits (239), Expect = e-130 Identities = 422/483 (87%), Gaps = 8/483 (1%) Strand = Plus / Minus Query: 92 aaaaaatatccttatttttactcttattgaatcgcggtaaagtattctaattcaataaga 151 ||||||| ||||||||| |||||||||||||| | ||||||||||||||||||||||| Sbjct: 774 aaaaaatctccttatttg-actcttattgaatcacagtaaagtattctaattcaataagg 716 Query: 152 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaa 211 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 715 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttataaccttaccaaa 656 Query: 212 taagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttc 271 |||||||| ||||||||||||||||| |||||||||||| |||| || | Sbjct: 655 taagacaatttttttggtttgttccgccatcctacccaatgaagtattagaat------c 602 Query: 272 aataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatggttag 331 || | ||| ||||| | ||||||||||| ||||||||||| ||||||||| ||||||||| Sbjct: 601 aaaagaattctatgcagtcataggttctatcgttcccactacttctcctttaatggttag 542 Query: 332 gtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctcagtttt 391 ||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 541 gtctgaatcccacaatggagcttccaaaaaatttctttccgagtcaattttctcagtttt 482 Query: 392 attaacccgggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaa 451 |||||| || | |||| |||||||||||| ||||||||| ||||| ||||||||||| | Sbjct: 481 attaactcgagttgctccttattattgctttaaatttgtatttcttgtttcaagttacga 422 Query: 452 tttttcattctctattagttttattatattgatgctttttcacattgccttttatgatgt 511 ||| ||||||||||| ||| |||||||||||||||| | ||||||||||||||||||| Sbjct: 421 tttcgaattctctattattttgattatattgatgctttattacattgccttttatgatgt 362 Query: 512 aattcatagaccatacacagtggaattctatatcttatttatttcctcttccttctttct 571 || ||||||||||||| || || | ||||||||| ||| ||||||||||| |||||| Sbjct: 361 aacccatagaccatacataggagagtcctatatctttctta-ttcctcttcctgctttct 303 Query: 572 atc 574 ||| Sbjct: 302 atc 300
>gb|U54741.1|SMU54741 Sucrea maculata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1030 Score = 474 bits (239), Expect = e-130 Identities = 422/483 (87%), Gaps = 8/483 (1%) Strand = Plus / Minus Query: 92 aaaaaatatccttatttttactcttattgaatcgcggtaaagtattctaattcaataaga 151 ||||||| ||||||||| |||||||||||||| | ||||||||||||||||||||||| Sbjct: 734 aaaaaatctccttatttg-actcttattgaatcacagtaaagtattctaattcaataagg 676 Query: 152 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaa 211 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 675 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttataaccttaccaaa 616 Query: 212 taagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttc 271 |||||||| ||||||||||||||||| |||||||||||| |||| || | Sbjct: 615 taagacaatttttttggtttgttccgccatcctacccaatgaagtattagaat------c 562 Query: 272 aataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatggttag 331 || | ||| ||||| | ||||||||||| ||||||||||| ||||||||| ||||||||| Sbjct: 561 aaaagaattctatgcagtcataggttctatcgttcccactacttctcctttaatggttag 502 Query: 332 gtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctcagtttt 391 ||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 501 gtctgaatcccacaatggagcttccaaaaaatttctttccgagtcaattttctcagtttt 442 Query: 392 attaacccgggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaa 451 |||||| || | |||| |||||||||||| ||||||||| ||||| ||||||||||| | Sbjct: 441 attaactcgagttgctccttattattgctttaaatttgtatttcttgtttcaagttacga 382 Query: 452 tttttcattctctattagttttattatattgatgctttttcacattgccttttatgatgt 511 ||| ||||||||||| ||| |||||||||||||||| | ||||||||||||||||||| Sbjct: 381 tttcgaattctctattattttgattatattgatgctttattacattgccttttatgatgt 322 Query: 512 aattcatagaccatacacagtggaattctatatcttatttatttcctcttccttctttct 571 || ||||||||||||| || || | ||||||||| ||| ||||||||||| |||||| Sbjct: 321 aacccatagaccatacataggagagtcctatatctttctta-ttcctcttcctgctttct 263 Query: 572 atc 574 ||| Sbjct: 262 atc 260
>gb|AY847091.1| Gynerium sagittatum ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1184 Score = 472 bits (238), Expect = e-130 Identities = 420/481 (87%), Gaps = 14/481 (2%) Strand = Plus / Minus Query: 106 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 165 |||||| ||||||||||||| | |||||| ||||||| ||||||| |||||||||||||| Sbjct: 749 tttttattcttattgaatcgtg-taaagttttctaatccaataaggatttcgcgggcgaa 691 Query: 166 tatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnn 225 ||||||||||||||||||||||||||||||||| || |||||||||||| ||| Sbjct: 690 tatttactctttcctgtcttatttgttaatttagaaccttaccaaataaagcaatttttt 631 Query: 226 nggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 630 tggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 571 Query: 286 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 345 | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| ||| Sbjct: 570 cagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgca 511 Query: 346 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 405 | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 510 atggagcttccaaaaaatttctttccgagtcaattttctcagttttattaacccgggctg 451 Query: 406 ctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcattctcta 465 |||||| ||||||||| |||||| || || || ||||||||||| |||| ||||||| Sbjct: 450 ctcttttttattgctttaaatttttatttattgtttcaagttacgatttcgaattctctc 391 Query: 466 ttagtttta--------ttatattgatgctttttcacattgcc----ttttatgatgtaa 513 || ||||| ||||||||||||||| |||||||||| ||||||||||||| Sbjct: 390 ttttttttattattttattatattgatgctttatcacattgccttttttttatgatgtaa 331 Query: 514 ttcatagaccatacacagtggaattctatatcttatttatttcctcttccttctttctat 573 ||||||| ||||||||| |||||| ||||||||| ||| ||| |||||||||| ||||| Sbjct: 330 ttcataggccatacacattggaatcctatatctttctta-ttcttcttccttctatctat 272 Query: 574 c 574 | Sbjct: 271 c 271
>gb|AF133488.1|AF133488 Pharus lappulaceus ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1182 Score = 464 bits (234), Expect = e-127 Identities = 414/471 (87%), Gaps = 4/471 (0%) Strand = Plus / Minus Query: 106 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 165 ||||||||||||||||||| | ||||||||||||||| |||||| |||||||||||||| Sbjct: 732 tttttactcttattgaatcacagtaaagtattctaatccaataaagatttcgcgggcgaa 673 Query: 166 tatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnn 225 ||||||||||||||||||||||| | ||||||||| |||||||||||| ||| Sbjct: 672 tatttactctttcctgtcttattcatcaatttataaccttaccaaataaagcaatttttt 613 Query: 226 nggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctat 284 |||||||||||||||||||||||||||||| ||||||||| |||| || |||||| ||| Sbjct: 612 tggtttgttccgccatcccacccaatgaagtattaggattcgtttttaagaaaatcttat 553 Query: 285 ggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgc 344 | | ||||||||||||||||||||||||||||||| | |||||||||||||||| ||||| Sbjct: 552 gcagtcataggttctgtcgttcccactgcttctccattaatggttaggtctgaaccccgc 493 Query: 345 aacggagcttccaa-aaaatttctttccgagttaattttctcagttttattaacccgggc 403 || ||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 492 aatggagcttccaacaaaatttctttccgagtcaattttctcagttttattaacccaggc 433 Query: 404 ggctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcattctc 463 ||||||||||||| ||| || | || ||||| ||||||||||| |||| |||||| Sbjct: 432 tgctctttattatttcttttaa-tcctatttcttgtttcaagttacgatttcgaattctc 374 Query: 464 tattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagacc 523 ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 373 agttatttttattatattgatgctttatcacattgccttttatgatgtaattcatagacc 314 Query: 524 atacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||| | |||||| ||||||||| ||| ||||| ||| ||||||||||| Sbjct: 313 atacatattggaatcctatatctttctta-ttcctattctttctttctatc 264
>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006J12, complete sequence Length = 157069 Score = 458 bits (231), Expect = e-125 Identities = 415/473 (87%), Gaps = 8/473 (1%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 145293 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 145234 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||| ||||||||||||||||| |||| |||| |||||||||||| Sbjct: 145233 atttactctttcatgtcttatttgttaattcataaccttatcaaataagacaattttttt 145174 Query: 227 -ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 285 |||||||||||||||||||||||||||||| || ||||| ||||||| |||||||||| Sbjct: 145173 tggtttgttccgccatcccacccaatgaagtattgggatttttttcaagaaaatcctatc 145114 Query: 286 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 345 | |||||||||||||| |||||||||||||||||| ||||||||||| |||||| |||| Sbjct: 145113 cagtcataggttctgtcattcccactgcttctcctttaatggttaggtttgaatctcgca 145054 Query: 346 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 405 | |||||||||||||||||||||||||||| || |||||||| ||||||||| | || | Sbjct: 145053 atggagcttccaaaaaatttctttccgagtcaa-tttctcag-tttattaactcaggacg 144996 Query: 406 ctctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattc 461 |||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| |||| Sbjct: 144995 ctctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattc 144936 Query: 462 tctattagttttattatattgatgctttttcacattgccttttatgatgtaattcataga 521 | | ||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 144935 tttgttatttttattatattgatgctttatcacattgctttttatgatgtaattcataga 144876 Query: 522 ccatacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||||| | |||||| ||||||||| | | ||| |||||||||||||||||| Sbjct: 144875 ccatacatattggaatcctatatctt-tcttttttctcttccttctttctatc 144824 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/52 (86%), Gaps = 1/52 (1%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatattta 69 |||||||||||||| || |||||| || |||||||||| || ||||||||| Sbjct: 145376 atctagaatatatctag-atgtgtatgtttatttatctatattctatattta 145326
>gb|AC104708.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1174_H11, complete sequence Length = 102567 Score = 458 bits (231), Expect = e-125 Identities = 415/473 (87%), Gaps = 8/473 (1%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 4480 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 4421 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||| ||||||||||||||||| |||| |||| |||||||||||| Sbjct: 4420 atttactctttcatgtcttatttgttaattcataaccttatcaaataagacaattttttt 4361 Query: 227 -ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 285 |||||||||||||||||||||||||||||| || ||||| ||||||| |||||||||| Sbjct: 4360 tggtttgttccgccatcccacccaatgaagtattgggatttttttcaagaaaatcctatc 4301 Query: 286 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 345 | |||||||||||||| |||||||||||||||||| ||||||||||| |||||| |||| Sbjct: 4300 cagtcataggttctgtcattcccactgcttctcctttaatggttaggtttgaatctcgca 4241 Query: 346 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 405 | |||||||||||||||||||||||||||| || |||||||| ||||||||| | || | Sbjct: 4240 atggagcttccaaaaaatttctttccgagtcaa-tttctcag-tttattaactcaggacg 4183 Query: 406 ctctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattc 461 |||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| |||| Sbjct: 4182 ctctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattc 4123 Query: 462 tctattagttttattatattgatgctttttcacattgccttttatgatgtaattcataga 521 | | ||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 4122 tttgttatttttattatattgatgctttatcacattgctttttatgatgtaattcataga 4063 Query: 522 ccatacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||||| | |||||| ||||||||| | | ||| |||||||||||||||||| Sbjct: 4062 ccatacatattggaatcctatatctt-tcttttttctcttccttctttctatc 4011 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/52 (86%), Gaps = 1/52 (1%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatattta 69 |||||||||||||| || |||||| || |||||||||| || ||||||||| Sbjct: 4563 atctagaatatatctag-atgtgtatgtttatttatctatattctatattta 4513
>gb|AY847100.1| Chasmanthium sessiliflorum ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1142 Score = 452 bits (228), Expect = e-124 Identities = 389/444 (87%), Gaps = 7/444 (1%) Strand = Plus / Minus Query: 137 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 196 |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 689 tctaatccaataaagatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 630 Query: 197 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 256 ||||| |||||||||||| || |||||||| ||||||||||||||||||||| Sbjct: 629 tataaccttaccaaataaagcattttttttggtttgtttcgccatcccacccaatgaagt 570 Query: 257 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 316 |||||||||||||||||||||||||||| | ||||||||| | |||||||||| ||||| Sbjct: 569 attaggattcttttcaataaaatcctatgcagtcataggttttctcgttcccacagcttc 510 Query: 317 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 376 ||||| ||||||||||| ||||||| |||| |||||||||||||||||||||||||||| Sbjct: 509 tcctttaatggttaggtttgaatcctgcaatggagcttccaaaaaatttctttccgagtc 450 Query: 377 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 436 ||||||||||||||||||||||| ||| ||||||| ||||||||| |||||| || || | Sbjct: 449 aattttctcagttttattaaccctggctgctcttttttattgctttaaatttttatttat 390 Query: 437 tctttcaagttacaatttttcattctctattagt------tttattatattgatgctttt 490 | ||||||||||| |||| ||||||| || | ||||||||||||||||||| Sbjct: 389 tgtttcaagttacgatttcgaattctctcttttttttttatttattatattgatgcttta 330 Query: 491 tcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatcttatt 550 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| | Sbjct: 329 tcacattgccttttatgatgtaattcatagaccatacacattggaatcctatatctttct 270 Query: 551 tatttcctcttccttctttctatc 574 || ||| |||||||||| |||||| Sbjct: 269 ta-ttcttcttccttctatctatc 247
>gb|AY847084.1| Pennisetum setaceum ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1016 Score = 452 bits (228), Expect = e-124 Identities = 421/487 (86%), Gaps = 13/487 (2%) Strand = Plus / Minus Query: 100 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 159 |||||||||||| ||||||||||||| |||||||||||||||| ||||||| |||||||| Sbjct: 747 tccttatttttattcttattgaatcgtggtaaagtattctaatccaataaggatttcgcg 688 Query: 160 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 219 ||||||||||||||||||||||||||||||||||||||| || |||| ||||||| ||| Sbjct: 687 ggcgaatatttactctttcctgtcttatttgttaatttagaatcttatcaaataaagcaa 628 Query: 220 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 279 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 627 tttttttggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 568 Query: 280 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 339 || ||| ||||||||| |||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 567 ccgatgtcgtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaat 508 Query: 340 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 399 || |||| |||||||||||||||||||||||||||| |||||||||||||||||| || | Sbjct: 507 cctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttattgacgc 448 Query: 400 gggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcat 459 |||| ||||||| ||||| ||| |||||| | || || ||||||||||| |||| || Sbjct: 447 gggctgctcttttttatttctttaaattttgattttttatttcaagttacgatttcgaat 388 Query: 460 tctctattagtttta--------ttatattgatgctttttcacattgc----cttttatg 507 ||||| || ||||| ||||||||||||||| | ||||||| ||||||| Sbjct: 387 tctctcttttttttattattttattatattgatgctttataacattgctttttttttatg 328 Query: 508 atgtaattcatagaccatacacagtggaattctatatcttatttatttcctcttccttct 567 ||||||||||||||||||||||| |||||||||||||||| ||| ||| |||||||||| Sbjct: 327 atgtaattcatagaccatacacattggaattctatatctttctta-ttcttcttccttct 269 Query: 568 ttctatc 574 |||||| Sbjct: 268 atctatc 262
>gb|AY847099.1| Chasmanthium laxum rpl16 gene, intron; chloroplast Length = 1165 Score = 448 bits (226), Expect = e-123 Identities = 389/445 (87%), Gaps = 8/445 (1%) Strand = Plus / Minus Query: 137 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 196 |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 710 tctaatccaataaagatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 651 Query: 197 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 256 ||||| |||||||||||| || |||||||| ||||||||||||||||||||| Sbjct: 650 tataaccttaccaaataaagcattttttttggtttgtttcgccatcccacccaatgaagt 591 Query: 257 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 316 |||||||||||||||||||||||||||| | ||||||||| | |||||||||| ||||| Sbjct: 590 attaggattcttttcaataaaatcctatgcagtcataggttttctcgttcccacagcttc 531 Query: 317 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 376 ||||| ||||||||||| ||||||| |||| |||||||||||||||||||||||||||| Sbjct: 530 tcctttaatggttaggtttgaatcctgcaatggagcttccaaaaaatttctttccgagtc 471 Query: 377 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 436 ||||||||||||||||||||||| ||| ||||||| ||||||||| |||||| || || | Sbjct: 470 aattttctcagttttattaaccctggctgctcttttttattgctttaaatttttatttat 411 Query: 437 tctttcaagttacaatttttcattctctattagttt-------tattatattgatgcttt 489 | ||||||||||| |||| ||||||| || ||| ||||||||||||||||| Sbjct: 410 tgtttcaagttacgatttcgaattctctctttttttttttatttattatattgatgcttt 351 Query: 490 ttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatcttat 549 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 350 atcacattgccttttatgatgtaattcatagaccatacacattggaatcctatatctttc 291 Query: 550 ttatttcctcttccttctttctatc 574 ||| ||| |||||||||| |||||| Sbjct: 290 tta-ttcttcttccttctatctatc 267
>gb|AF133482.1|AF133482 Chasmanthium laxum ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1195 Score = 448 bits (226), Expect = e-123 Identities = 413/476 (86%), Gaps = 15/476 (3%) Strand = Plus / Minus Query: 106 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 165 |||||| ||||||||||||||||| |||||| |||||| |||||||||||||| Sbjct: 760 tttttattcttattgaatcgcggtg-----ttctaagccaataaagatttcgcgggcgaa 706 Query: 166 tatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnn 225 |||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 705 tatttactctttcctgtcttatttgttaatttataaccttaccaaataaaacaatttttt 646 Query: 226 nggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 285 |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 645 tggtttgtttcgccatcccacccaatgaagtattaggattcttttcaataaaatcctatg 586 Query: 286 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 345 | |||||| |||| ||||||||| |||||||||| ||||||||||| ||||||| ||| Sbjct: 585 cagtcatagattct--cgttcccacagcttctcctttaatggttaggtttgaatcctgca 528 Query: 346 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 405 | |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| | Sbjct: 527 atggagcttccaaaaaatttctttccgagtcaattttctcagttttattaacccaggctg 468 Query: 406 ctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcattctcta 465 |||||| ||||||||| |||||| || || || ||||||||||| |||| ||||||| Sbjct: 467 ctcttttttattgctttaaatttttatttattgtttcaagttacgatttcgaattctctc 408 Query: 466 ttagttt-------tattatattgatgctttttcacattgccttttatgatgtaattcat 518 || ||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 407 ttttttttttattttattatattgatgctttatcacattgccttttatgatgtaattcat 348 Query: 519 agaccatacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||||||||| |||||| ||||||||| ||| ||| |||||||||| |||||| Sbjct: 347 agaccatacacattggaatcctatatctttctta-ttcttcttccttctatctatc 293
>gb|AY847096.1| Bromuniola gossweileri rpl16 gene, intron; chloroplast Length = 557 Score = 438 bits (221), Expect = e-120 Identities = 387/444 (87%), Gaps = 8/444 (1%) Strand = Plus / Minus Query: 137 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 196 |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 521 tctaatccaataaagatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 462 Query: 197 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 256 ||||| |||||||||||| || |||||||| ||||||||||||||||||||| Sbjct: 461 tataaccttaccaaataaagcattttttttggtttgtttcgccatcccacccaatgaagt 402 Query: 257 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 316 |||||||||||||||||||||||||||| | ||||||||| | |||||||||| ||||| Sbjct: 401 attaggattcttttcaataaaatcctatgcagtcataggttttctcgttcccacagcttc 342 Query: 317 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 376 ||||| ||||||||||| ||||||| |||| |||||||||||||||||||||||||||| Sbjct: 341 tcctttaatggttaggtttgaatcctgcaatggagcttccaaaaaatttctttccgagtc 282 Query: 377 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 436 ||||||||||||||||||||||| ||| ||||||| ||||||||| |||||| || || | Sbjct: 281 aattttctcagttttattaaccctggctgctcttttttattgctttaaatttttatttat 222 Query: 437 tctttcaagttacaatttttcattctctattagttt-------tattatattgatgcttt 489 | ||||||||||| |||| ||||||| || ||| ||||||||||| ||||| Sbjct: 221 tgtttcaagttacgatttcgaattctctctttttttttttatttattatattgaggcttt 162 Query: 490 ttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatcttat 549 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 161 atcacattgccttttatgatgtaattcatagaccatacacattggaatcctatatctttc 102 Query: 550 ttatttcctcttccttctttctat 573 ||| ||| |||||||||| ||||| Sbjct: 101 tta-ttcttcttccttctatctat 79
>gb|AY847089.1| Tristachya biseriata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1150 Score = 434 bits (219), Expect = e-118 Identities = 411/475 (86%), Gaps = 7/475 (1%) Strand = Plus / Minus Query: 100 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 159 |||||||||||| | ||||||||||| | |||||||||||||| |||||| ||||||| Sbjct: 736 tccttatttttatttttattgaatcgtgataaagtattctaatccaataaagatttcgca 677 Query: 160 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 219 |||||||||||||||||| | ||||||||||||||||||||| |||||||||||| ||| Sbjct: 676 ggcgaatatttactcttttcngtcttatttgttaatttataaccttaccaaataaagcaa 617 Query: 220 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 279 |||||||||||||||||| ||||||||||| ||||||||||||| |||||||| Sbjct: 616 tttttttggtttgttccgccatcccgcccaatgaagtattaggattctttttaataaaat 557 Query: 280 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 339 |||||| | ||||||||| |||||||||||| ||||||| || ||||||||||| ||||| Sbjct: 556 cctatgcagtcataggttttgtcgttcccacagcttctcttttaatggttaggtttgaat 497 Query: 340 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 399 || |||| |||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 496 cctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttatcaaccg 437 Query: 400 gggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcat 459 |||| ||||||| ||||||||| || || || || ||||||||| | | || || | Sbjct: 436 gggctgctcttttttattgctttaattt-----tttttgtttcaagtttcgaattctctt 382 Query: 460 tctctattagttttattatattgatgctttttcacattgccttttatgatgtaattcata 519 | | ||||| |||| |||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 381 tttttatta-tttttttattttgatgctttatcacattgccttttatgatgtaattcata 323 Query: 520 gaccatacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||||||||| |||||| ||||||||| ||| ||| |||||||||| |||||| Sbjct: 322 gaccatacacattggaatcctatatctttctta-ttcttcttccttctatctatc 269
>gb|AF133484.1|AF133484 Phragmites australis ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1199 Score = 432 bits (218), Expect = e-118 Identities = 292/319 (91%) Strand = Plus / Minus Query: 103 ttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggc 162 ||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||| Sbjct: 777 ttatttttactcttattgaatcgtggtaaagtattctaatccaataaagatttcgcgggc 718 Query: 163 gaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannn 222 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 717 gaatatttactctttcctgtcttatttgttaatttataaccttaccaaataagacaattt 658 Query: 223 nnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcct 282 |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 657 ttttggtttgttccgccatcccacccaatgaagtattaggattcttttgaataaaatcct 598 Query: 283 atggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatccc 342 ||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| Sbjct: 597 atgcagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcct 538 Query: 343 gcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccggg 402 |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 537 gcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttattaaccccgg 478 Query: 403 cggctctttattattgctt 421 |||| |||||||||||| Sbjct: 477 ttgctccttattattgctt 459 Score = 137 bits (69), Expect = 4e-29 Identities = 97/105 (92%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 470 ttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacac 529 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 398 ttttattatattgatgctttatcacattgccttttatgatgtaattcatagaccatacac 339 Query: 530 agtggaattctatatcttatttatttcctcttccttctttctatc 574 | |||||| ||||||||| ||| ||| |||||||||| |||||| Sbjct: 338 attggaatcctatatctttctta-ttcttcttccttctatctatc 295
>dbj|AK059459.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-C07, full insert sequence Length = 352 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 337 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 278 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 277 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 218 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 217 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 158 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 157 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 98 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 97 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 39 Query: 407 tctttattattgcttaaaatttgtagttcttctttcaa 444 ||||| ||||| ||| ||||||||| ||||| |||||| Sbjct: 38 tctttgttattccttgaaatttgtatttcttgtttcaa 1
>gb|AY912215.1| Temochloa liliana ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1149 Score = 426 bits (215), Expect = e-116 Identities = 388/448 (86%), Gaps = 10/448 (2%) Strand = Plus / Minus Query: 106 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 165 |||||||||||||| ||||| |||||||||||| ||| |||||| |||||||||||||| Sbjct: 739 tttttactcttattaaatcgtggtaaagtattcaaatccaataaagatttcgcgggcgaa 680 Query: 166 tatttactctttcctgtcttatttg--------ttaatttataaacttaccaaataagac 217 |||||||||||| |||||||||||| ||||||||||| |||||||||||| | Sbjct: 679 tatttactctttactgtcttatttgcttatttgttaatttataaccttaccaaataaagc 620 Query: 218 aannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaa 277 || |||||||||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 619 aatttttttggtttgttccgccatcccacccaatgaagtattaggattcttttcaaaaaa 560 Query: 278 atcctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctga 337 |||||||||| ||||||||| |||||||||||| ||||||| || |||| |||||| ||| Sbjct: 559 atcctatggagtcataggttttgtcgttcccacagcttctcttttaatgcttaggtttga 500 Query: 338 atcccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaac 397 |||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 499 atcctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttattaac 440 Query: 398 ccgggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttc 457 ||| || |||| ||||||||| || |||||| || || || ||||||||||| ||||| Sbjct: 439 ccgagctgctccttattattgttttaaatttttatttattgtttcaagttacgattttga 380 Query: 458 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 517 ||||| | || |||| || |||||||||||| ||||||||||||||||||||| ||||| Sbjct: 379 attctttctt--tttttttttattgatgctttatcacattgccttttatgatgtcattca 322 Query: 518 tagaccatacacagtggaattctatatc 545 ||||||||||||| ||||| ||||||| Sbjct: 321 tagaccatacacataggaatcctatatc 294
>gb|AY847076.1| Aristida purpurea var. curvifolia ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1112 Score = 422 bits (213), Expect = e-115 Identities = 372/425 (87%), Gaps = 3/425 (0%) Strand = Plus / Minus Query: 106 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 165 |||||||||||||| ||||| | |||||||||| ||| |||||| ||||||||||| || Sbjct: 725 tttttactcttattaaatcgtg-taaagtattcaaatccaataaagatttcgcgggcaaa 667 Query: 166 tatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnn 225 |||||||||||| ||||||||||||||||||||||| |||||||||||| ||| Sbjct: 666 tatttactctttactgtcttatttgttaatttataaccttaccaaataaagcaatttttt 607 Query: 226 nggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 285 |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| Sbjct: 606 tggtttgttccgccatcccacccaatgaagtattaggattcttttcaaaaaaatcctatg 547 Query: 286 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 345 || ||||||||| |||||||||||| ||||||| || |||| |||||| ||||||| ||| Sbjct: 546 gagtcataggttttgtcgttcccacagcttctcttttaatgcttaggtttgaatcctgca 487 Query: 346 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 405 | |||||||||||||||||||||||||||| |||||||||||||||||||||||| || | Sbjct: 486 atggagcttccaaaaaatttctttccgagtcaattttctcagttttattaacccgagctg 427 Query: 406 ctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcattctcta 465 ||| ||||||||| || |||||| || || || ||||||||||| ||||| ||||| | Sbjct: 426 ctccttattattgttttaaatttttatttattgtttcaagttacgattttgaattctttc 367 Query: 466 ttagttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccat 525 || |||| || | |||||||||| ||||||||||||||||||||| |||||||| |||| Sbjct: 366 tt--ttttttttttttgatgctttatcacattgccttttatgatgtcattcatagcccat 309 Query: 526 acaca 530 ||||| Sbjct: 308 acaca 304
>gb|AY847075.1| Karroochloa purpurea ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1053 Score = 418 bits (211), Expect = e-114 Identities = 382/440 (86%), Gaps = 6/440 (1%) Strand = Plus / Minus Query: 106 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 165 |||||| ||||||||||| ||||||||||| ||| |||||| |||||||||||||| Sbjct: 722 tttttagtcttattgaattatagtaaagtattcgaatccaataaatatttcgcgggcgaa 663 Query: 166 tatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnn 225 |||||||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 662 tatttactctttcctgtcttatttgttaatttataattttaccaaataaagcaagttttg 603 Query: 226 nggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 285 |||||||||||||||||||||| |||| || |||||||||||||||||||||||||||| Sbjct: 602 gggtttgttccgccatcccacccgatgatgtattaggattcttttcaataaaatcctatg 543 Query: 286 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 345 | ||||||||| ||||||||||| |||||||||| ||||||||||| ||||||| ||| Sbjct: 542 cagtcataggttttgtcgttcccatagcttctcctttaatggttaggtttgaatcctgca 483 Query: 346 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 405 | |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 482 atggagcttcaaaaaaatttcttttcgagttaattttctcagttttattaacccgggctg 423 Query: 406 ctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcattctcta 465 |||||||||||| ||| ||||| | | || |||||||||||||||| ||||||| Sbjct: 422 ctctttattatttctttcaattttgattagttgtttcaagttacaatttcaaattctctc 363 Query: 466 ttagttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccat 525 || |||| |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 362 tt--tttt----tattgatgctttatcacattgccttttatgatgtaattcatagaccat 309 Query: 526 acacagtggaattctatatc 545 |||| |||||| ||||||| Sbjct: 308 acacgttggaatcctatatc 289
>gb|AY847110.1| Zeugites pringlei ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1060 Score = 414 bits (209), Expect = e-112 Identities = 362/415 (87%), Gaps = 4/415 (0%) Strand = Plus / Minus Query: 137 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 196 |||||| |||||| ||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 707 tctaatccaataaagatttcgcgggcgaatgtttactctttcctgccttatttgttaatt 648 Query: 197 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 256 || || |||||||||||| | | |||||||||||||||||||||||||||||| Sbjct: 647 taaaatcttaccaaataaagccatttttttggtttgttccgccatcccacccaatgaagt 588 Query: 257 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 316 |||||||||||||| |||||||||||| | ||||||||| | |||||||||| ||||| Sbjct: 587 attaggattcttttccataaaatcctatccagtcataggttttttcgttcccacagcttc 528 Query: 317 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 376 ||||| ||||||||||| ||||||| |||| ||||||||||||||||||||||||| || Sbjct: 527 tcctttaatggttaggtttgaatcctgcaatggagcttccaaaaaatttctttccgggtc 468 Query: 377 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 436 ||||||||||||||||||||| ||||| ||||||| ||||||||| |||||| || || | Sbjct: 467 aattttctcagttttattaactcgggctgctcttttttattgctttaaatttttatttat 408 Query: 437 tctttcaagttacaatttttcattctctattagtt----ttattatattgatgctttttc 492 | ||||||||||| |||| ||||||| || || |||||||||||||||||| || Sbjct: 407 tgtttcaagttacgatttcgaattctctctttttttttcttattatattgatgctttatc 348 Query: 493 acattgccttttatgatgtaattcatagaccatacacagtggaattctatatctt 547 |||||||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 347 acattgccttttatgatgtaattcatagaccatacacattggaatactatatctt 293
>gb|AY847109.1| Zeugites munroanus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 952 Score = 414 bits (209), Expect = e-112 Identities = 362/415 (87%), Gaps = 4/415 (0%) Strand = Plus / Minus Query: 137 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 196 |||||| |||||| |||||||||| |||| |||||||||||||| |||||||||||||| Sbjct: 593 tctaatccaataaagatttcgcgggggaatgtttactctttcctgccttatttgttaatt 534 Query: 197 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 256 ||||| |||||||||||| | | |||||||||||||||||||||||||||||| Sbjct: 533 tataaccttaccaaataaagccatttttttggtttgttccgccatcccacccaatgaagt 474 Query: 257 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 316 |||||||||||||| |||||||||||| | ||||||||| | |||||||||| ||||| Sbjct: 473 attaggattcttttccataaaatcctatctagtcataggttttttcgttcccacagcttc 414 Query: 317 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 376 ||||| ||||||||||| ||||||| |||| |||||||||||||||||||||||||||| Sbjct: 413 tcctttaatggttaggtttgaatcctgcaatggagcttccaaaaaatttctttccgagtc 354 Query: 377 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 436 ||||||||||||||||||||| ||||| ||||||| ||||||||| |||||| || || | Sbjct: 353 aattttctcagttttattaactcgggctgctcttttttattgcttgaaatttttatttat 294 Query: 437 tctttcaagttacaatttttcattctctattagtt----ttattatattgatgctttttc 492 | ||||||||||| |||| ||||||| || || |||||||||||||||||| || Sbjct: 293 tgtttcaagttacgatttcaaattctctctttttttttcttattatattgatgctttatc 234 Query: 493 acattgccttttatgatgtaattcatagaccatacacagtggaattctatatctt 547 |||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 233 acattgccttttatgatgtaattcatagaccatacacatgggaatcctatatctt 179
>gb|AY847108.1| Zeugites mexicanus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1056 Score = 414 bits (209), Expect = e-112 Identities = 362/415 (87%), Gaps = 4/415 (0%) Strand = Plus / Minus Query: 137 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 196 |||||| |||||| ||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 703 tctaatccaataaagatttcgcgggcgaatgtttactctttcctgccttatttgttaatt 644 Query: 197 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 256 ||||| |||||||||||| | | |||||||||||||||||||||||||||||| Sbjct: 643 tataaccttaccaaataaagccatttttttggtttgttccgccatcccacccaatgaagt 584 Query: 257 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 316 |||||||||||||| |||||||||||| | ||||||||| | |||||||||| ||||| Sbjct: 583 attaggattcttttccataaaatcctatccagtcataggttttttcgttcccacagcttc 524 Query: 317 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 376 ||||| ||||||||||| ||||||| |||| ||||||||||||||||||||||||| || Sbjct: 523 tcctttaatggttaggtttgaatcctgcaatggagcttccaaaaaatttctttccgggtc 464 Query: 377 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 436 ||||||||||||||||||||| ||||| ||||||| ||||||||| |||||| || || | Sbjct: 463 aattttctcagttttattaactcgggctgctcttttttattgctttaaatttttatttat 404 Query: 437 tctttcaagttacaatttttcattctctattagtttt----attatattgatgctttttc 492 | ||||||||||| |||| ||||||| || |||| |||||||||||||||| || Sbjct: 403 tgtttcaagttacgatttcgaattctctctttttttttctaattatattgatgctttatc 344 Query: 493 acattgccttttatgatgtaattcatagaccatacacagtggaattctatatctt 547 |||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 343 acattgccttttatgatgtaattcatagaccatacacatgggaatcctatatctt 289
>gb|AY847080.1| Sporobolus indicus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1023 Score = 414 bits (209), Expect = e-112 Identities = 419/491 (85%), Gaps = 19/491 (3%) Strand = Plus / Minus Query: 96 aatatccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaattt 155 ||||||||| |||||| ||||||||||| ||||||||||||||| |||||| |||| Sbjct: 744 aatatccttttttttaaccttattgaatcatagtaaagtattctaatccaataaagattt 685 Query: 156 cgcgggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataag 215 ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 684 cgcgggcgaatatttactctttcttgtcttatttgttaatttataaccttaccaaataaa 625 Query: 216 acaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaata 275 ||| |||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 624 gcaatttttttggtttgttccgccatcccacccaatgaagtattaggattcttttcaata 565 Query: 276 aaatc----ctatggaatcataggttctgtcgttcccactgcttctccttgaatggttag 331 ||||| ||||| | ||||||||| |||||||||||| |||||||||| ||||||||| Sbjct: 564 aaatcaatcctatgcagtcataggttttgtcgttcccacagcttctcctttaatggttag 505 Query: 332 gtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctcagtttt 391 || ||||||| |||| |||||||||||| |||| ||||||||||||||||||||| Sbjct: 504 gtttgaatcctgcaatggagcttccaaa------cttttcgagttaattttctcagtttt 451 Query: 392 attaacccgggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaa 451 ||||| |||||| ||||||||||||||||| |||||| || || || |||||| |||| | Sbjct: 450 attaatccgggctgctctttattattgctttaaatttttatttattgtttcaaattacga 391 Query: 452 tttttcattctctattagt--------tttattatattgatgctttttcacattgccttt 503 ||| ||||||| ||| | ||||||||||||||||||| ||||||||||||| Sbjct: 390 tttaaaattctctcttatttttattattttattatattgatgctttatcacattgccttt 331 Query: 504 tatgatgtaattcatagaccatacacagtggaattctatatcttatttatttcctcttcc 563 |||||||||||||||||||||| || | |||||| |||||||| ||| ||| |||||| Sbjct: 330 tatgatgtaattcatagaccatccatattggaatcttatatctttctta-ttcttcttcc 272 Query: 564 ttctttctatc 574 ||||||||||| Sbjct: 271 ttctttctatc 261
>gb|AY847107.1| Zeugites hackelii ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1073 Score = 412 bits (208), Expect = e-112 Identities = 351/402 (87%), Gaps = 8/402 (1%) Strand = Plus / Minus Query: 154 ttcgcgggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaata 213 ||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 698 ttcgcgggcgaatgtttactctttcctgtcttatttggtaatttataaccttaccaaata 639 Query: 214 agacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaa 273 | | | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 638 aagccatttttttggtttgttccgccatcccacccaatgaagtattaggattcttttcaa 579 Query: 274 taaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggt 333 ||||||||||| | ||||||||| | |||||||||| |||||||||| ||||||||||| Sbjct: 578 taaaatcctatccagtcataggttttttcgttcccacagcttctcctttaatggttaggt 519 Query: 334 ctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttat 393 ||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 518 ttgaatcctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttat 459 Query: 394 taacccgggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaatt 453 |||||||||| ||||||| ||||||||| |||||| || || || ||||||||||| ||| Sbjct: 458 taacccgggctgctcttttttattgcttgaaatttttatttattgtttcaagttacgatt 399 Query: 454 tttcattctctattagttttattat--------attgatgctttttcacattgcctttta 505 | ||||||| || |||| |||| ||||||||||| ||||||||||||||| Sbjct: 398 tcgaattctctcttttttttcttattttattatattgatgctttatcacattgcctttta 339 Query: 506 tgatgtaattcatagaccatacacagtggaattctatatctt 547 ||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 338 tgatgtaattcatagaccatacacattggaatcctatatctt 297
>gb|AY847090.1| Isachne arundinacea ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1101 Score = 410 bits (207), Expect = e-111 Identities = 392/454 (86%), Gaps = 9/454 (1%) Strand = Plus / Minus Query: 101 ccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgg 160 ||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||| Sbjct: 714 ccttatttttactcttattgaatcgtggtaaagtattctaatccaataaagatttcgcgg 655 Query: 161 gcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaan 220 |||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 654 gcgaatttttactctttcctgtcttatttgttaatttataa-cttaccaaataaagcaat 596 Query: 221 nnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatc 280 ||||||||||||||||||| | |||||||| ||||||||||||||||||||||| Sbjct: 595 ttttttggtttgttccgccatcccatctaatgaagtattaggattcttttcaataaaatc 536 Query: 281 ctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatc 340 ||||| ||||||||| |||||||||||| |||||||||| |||| |||||| |||||| Sbjct: 535 ctatgctgtcataggttttgtcgttcccacagcttctcctttaatgtttaggtttgaatc 476 Query: 341 ccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccg 400 | |||| |||||||||||||||||||||||||||| ||||||||||||||||||||| || Sbjct: 475 ctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttattaacacg 416 Query: 401 ggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcatt 460 ||| ||| |||||||||||| ||||| | || || ||||| ||||| |||| ||| Sbjct: 415 ggctactccttattattgcttttaattt-ttttttttgtttcaggttactatttcgaatt 357 Query: 461 ctctattagttttattatattga-------tgctttttcacattgccttttatgatgtaa 513 |||| ||| ||||||||| || | |||||| ||||||||||||||||| ||||| Sbjct: 356 ctctcttatttttattattttaatatattgtgctttatcacattgccttttatggtgtaa 297 Query: 514 ttcatagaccatacacagtggaattctatatctt 547 | ||||||||||||||| ||||| ||||||||| Sbjct: 296 tccatagaccatacacataggaatcctatatctt 263
>gb|AY847085.1| Arundinella hirta ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1186 Score = 410 bits (207), Expect = e-111 Identities = 413/481 (85%), Gaps = 21/481 (4%) Strand = Plus / Minus Query: 106 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 165 |||||| ||||||||||||| |||||||||||||||| || |||||||||||||| Sbjct: 740 tttttattcttattgaatcgtggtaaagtattctaat------aggatttcgcgggcgaa 687 Query: 166 tatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnn 225 ||||||||||||||||||||||||||||||||| || ||| ||||||| ||| Sbjct: 686 tatttactctttcctgtcttatttgttaatttagaactttatcaaataaagcaatttttt 627 Query: 226 nggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 626 tggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 567 Query: 286 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 345 | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| ||| Sbjct: 566 tagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgca 507 Query: 346 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 405 | |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| | Sbjct: 506 atggagcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctg 448 Query: 406 ctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcattctcta 465 |||||| ||||||||| | |||| || || || ||||||||||| |||| ||||||| Sbjct: 447 ctcttttttattgctttatatttttatttgttgtttcaagttacgatttcgaattctctc 388 Query: 466 ttagtttta--------ttatattgatgctttttcacattgcc----ttttatgatgtaa 513 || ||||| ||||||||||||||| |||||||||| ||||||||||||| Sbjct: 387 ttttttttattattttattatattgatgctttatcacattgccttttttttatgatgtaa 328 Query: 514 ttcatagaccatacacagtggaattctatatcttatttatttcctcttccttctttctat 573 ||||||| ||||||||| |||||| ||||||||| ||| ||| |||||||||| ||||| Sbjct: 327 ttcatag-ccatacacattggaatcctatatctttctta-ttcttcttccttctatctat 270 Query: 574 c 574 | Sbjct: 269 c 269
>gb|AF133486.1|AF133486 Molinia caerulea ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1211 Score = 406 bits (205), Expect = e-110 Identities = 291/322 (90%) Strand = Plus / Minus Query: 103 ttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggc 162 ||||||||||||||||||||||| |||||||||| |||| |||||| ||||||||||| Sbjct: 779 ttatttttactcttattgaatcgtggtaaagtatcttaatccaataaagatttcgcgggc 720 Query: 163 gaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannn 222 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 719 gaatatttactctttcctgtcttatttgttaatttataaccttaccaaataaagcaattt 660 Query: 223 nnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcct 282 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 659 ttttggtttgttccgccatcccacccaatgaagtattaggattcttttcaataaaatcct 600 Query: 283 atggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatccc 342 ||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||| | Sbjct: 599 atgcagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaattct 540 Query: 343 gcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccggg 402 |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 539 gcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttattaaccccgg 480 Query: 403 cggctctttattattgcttaaa 424 |||| ||||||||||||||| Sbjct: 479 ttgctccttattattgcttaaa 458 Score = 137 bits (69), Expect = 4e-29 Identities = 97/105 (92%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 470 ttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacac 529 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 400 ttttattatattgatgctttatcacattgccttttatgatgtaattcatagaccatacac 341 Query: 530 agtggaattctatatcttatttatttcctcttccttctttctatc 574 | |||||| ||||||||| ||| ||| |||||||||| |||||| Sbjct: 340 attggaatcctatatctttctta-ttcttcttccttctatctatc 297
>gb|AF133481.1|AF133481 Chloris distichophylla ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1180 Score = 406 bits (205), Expect = e-110 Identities = 412/482 (85%), Gaps = 21/482 (4%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 |||||| ||||||||||| ||||||||||||||| |||||| ||||||||||||||| Sbjct: 766 ttttacccttattgaatcatagtaaagtattctaatccaataaagatttcgcgggcgaat 707 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||| |||||||||||||||||||||| |||| |||||||||||| Sbjct: 706 atttactctttcttgtcttatttgttaatttataaccttatcaaataagacaattttttt 647 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataa----aatcct 282 |||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| Sbjct: 646 ggtttgttccgccatcccgcccaatgaagtattaggattcttttcaataaaatcaatcct 587 Query: 283 atggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatccc 342 ||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| Sbjct: 586 atgcagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcct 527 Query: 343 gcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccggg 402 ||||||||| ||||||| ||||||||||||||||||| ||||||||||||| ||| Sbjct: 526 gcaacggagtttccaaa------ctttccgagttaattttcttagttttattaacctggg 473 Query: 403 cggctctttattattgcttaaaatttgtagttcttctttc--aagttacaatttttcatt 460 | ||||||||||||||||| |||||| || || || |||| || |||| ||||| ||| Sbjct: 472 ctgctctttattattgcttcaaatttttatttattgtttcaaaaattacgattttaaatt 413 Query: 461 ctctattagtttt--------attatattgatgctttttcacattgccttttatgatgta 512 |||| ||| |||| |||||||||||||||| |||||||||||||||||||||| Sbjct: 412 ctctcttatttttattattttattatattgatgctttatcacattgccttttatgatgta 353 Query: 513 attcatagaccatacacagtggaattctatatcttatttatttcctcttccttctttcta 572 |||||||||||||||||| |||||| |||||||| ||| ||| |||||||||| |||| Sbjct: 352 attcatagaccatacacattggaatcttatatctttctta-ttcttcttccttctatcta 294 Query: 573 tc 574 || Sbjct: 293 tc 292
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 402 bits (203), Expect = e-109 Identities = 300/332 (90%), Gaps = 2/332 (0%) Strand = Plus / Plus Query: 100 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 159 ||||| |||||| ||||||||||||| |||||||||||||||| ||||||| |||||||| Sbjct: 1320 tccttttttttattcttattgaatcgtggtaaagtattctaatccaataaggatttcgcg 1379 Query: 160 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 219 ||||||||||||||||||||||||||||||||||||||| || |||| ||||||| ||| Sbjct: 1380 ggcgaatatttactctttcctgtcttatttgttaatttagaaccttatcaaataaagcaa 1439 Query: 220 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 279 ||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1440 tttttttggtttgttccgccatcccacccaatgaagtgttaggattctttccaataaaat 1499 Query: 280 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 339 |||||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 1500 cctatgtagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaat 1559 Query: 340 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 399 || |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1560 cctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc 1619 Query: 400 gggcggctcttta-ttattgcttaaaatttgt 430 ||| |||||||| ||||||||| | |||||| Sbjct: 1620 -ggctgctctttatttattgctttatatttgt 1650 Score = 95.6 bits (48), Expect = 2e-16 Identities = 95/109 (87%), Gaps = 5/109 (4%) Strand = Plus / Plus Query: 470 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 525 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 1704 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 1763 Query: 526 acacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||| ||||| ||||||||| ||| ||| |||||||||| |||||| Sbjct: 1764 acacatgggaatcctatatctttctta-ttcttcttccttctatctatc 1811
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 402 bits (203), Expect = e-109 Identities = 300/332 (90%), Gaps = 2/332 (0%) Strand = Plus / Plus Query: 100 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 159 ||||| |||||| ||||||||||||| |||||||||||||||| ||||||| |||||||| Sbjct: 80877 tccttttttttattcttattgaatcgtggtaaagtattctaatccaataaggatttcgcg 80936 Query: 160 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 219 ||||||||||||||||||||||||||||||||||||||| || |||| ||||||| ||| Sbjct: 80937 ggcgaatatttactctttcctgtcttatttgttaatttagaaccttatcaaataaagcaa 80996 Query: 220 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 279 ||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 80997 tttttttggtttgttccgccatcccacccaatgaagtgttaggattctttccaataaaat 81056 Query: 280 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 339 |||||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 81057 cctatgtagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaat 81116 Query: 340 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 399 || |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 81117 cctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc 81176 Query: 400 gggcggctcttta-ttattgcttaaaatttgt 430 ||| |||||||| ||||||||| | |||||| Sbjct: 81177 -ggctgctctttatttattgctttatatttgt 81207 Score = 95.6 bits (48), Expect = 2e-16 Identities = 95/109 (87%), Gaps = 5/109 (4%) Strand = Plus / Plus Query: 470 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 525 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 81261 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 81320 Query: 526 acacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||| ||||| ||||||||| ||| ||| |||||||||| |||||| Sbjct: 81321 acacatgggaatcctatatctttctta-ttcttcttccttctatctatc 81368
>gb|AF133490.1|AF133490 Streptochaeta angustifolia ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1243 Score = 400 bits (202), Expect = e-108 Identities = 418/487 (85%), Gaps = 9/487 (1%) Strand = Plus / Minus Query: 95 aaatatccttatttttactcttattgaatcgcggtaaagta-----ttctaattcaataa 149 |||| ||||||||||||||||||||||||| |||||||||| || |||| |||||| Sbjct: 807 aaatctccttatttttactcttattgaatcacggtaaagtaaagtattgtaatccaataa 748 Query: 150 gaatttcgcgggcgaatatttactctttcctgtcttatttgttaatttataaacttacca 209 ||||||||||||||||||||||||||||||||||||| || |||| | || ||||||| Sbjct: 747 agatttcgcgggcgaatatttactctttcctgtcttattcgtcaattcaaaaccttacca 688 Query: 210 aataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc-tt 268 ||||| ||| |||||||||||||||||||||||||||||| ||||||||| || Sbjct: 687 aataaagcaatttttttggtttgttccgccatcccacccaatgaagtattaggattcgtt 628 Query: 269 ttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatggt 328 ||||||||||||||||| | |||||||||||||||||||||| |||||||| |||||| Sbjct: 627 ttcaataaaatcctatgtagtcataggttctgtcgttcccacagcttctccactaatggt 568 Query: 329 taggtctgaatcccgcaacggagcttccaa-aaaatttctttccgagttaattttctcag 387 |||||||||| || |||| ||||||||||| ||||||||||||||||| |||||||||| Sbjct: 567 taggtctgaaccctgcaatggagcttccaacaaaatttctttccgagtccattttctcag 508 Query: 388 ttttattaacccgggcggctctttattattgcttaaaatttgtagttcttctttcaagtt 447 |||||||||||| || ||||||||||||| ||| | || || ||||| ||||||||| Sbjct: 507 ttttattaacccaggttgctctttattatttcttttca-ttctatttcttgtttcaagtt 449 Query: 448 acaatttttcattctctattagttttattatattgatgctttttcacattgccttttatg 507 || |||| |||||| ||| || ||||||||||||||||| ||||| ||||||||||| Sbjct: 448 acgatttggaattctcagttatttatattatattgatgctttatcacactgccttttatg 389 Query: 508 atgtaattcatagaccatacacagtggaattctatatcttatttatttcctcttccttct 567 ||||||||||| ||||||||| | |||||| ||||||||| ||| ||||| ||| |||| Sbjct: 388 atgtaattcatggaccatacatattggaatcctatatctttctta-ttcctgttctttct 330 Query: 568 ttctatc 574 ||||||| Sbjct: 329 ttctatc 323
>gb|AF133459.1|AF133459 Ehrharta calycina ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1192 Score = 398 bits (201), Expect = e-108 Identities = 299/334 (89%) Strand = Plus / Minus Query: 111 actcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaatattt 170 |||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 746 actcctattgaatcacggtaaagtattctaattcaataaggatttcgcgggcgaatattt 687 Query: 171 actctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnnggtt 230 |||||||||||||||||||||||||| |||| |||| |||||||||||| |||| Sbjct: 686 actctttcctgtcttatttgttaattcataaccttatcaaataagacaatttttttggtt 627 Query: 231 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 290 |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | || Sbjct: 626 tgttccgccatcccacccaatgaagtattaggattcttttcaataaaatcctatgcagtc 567 Query: 291 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 350 || |||||||||||||||| |||||||| | |||| |||||| | ||| ||||| ||| Sbjct: 566 atgagttctgtcgttcccacagcttctcccttaatgattaggtttaaatttcgcaatgga 507 Query: 351 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 410 |||| |||||||||||||||||||| |||| | |||||||||||||||||| | |||||| Sbjct: 506 gctttcaaaaaatttctttccgagtcaattctatcagttttattaacccggaccgctctt 447 Query: 411 tattattgcttaaaatttgtagttcttctttcaa 444 ||||||||||||||||||||| ||||| |||||| Sbjct: 446 tattattgcttaaaatttgtatttcttgtttcaa 413 Score = 81.8 bits (41), Expect = 2e-12 Identities = 90/105 (85%), Gaps = 6/105 (5%) Strand = Plus / Minus Query: 475 ttatattgatgctttttcacattgccttttatg-----atgtaattcatagaccatacac 529 ||||||||||||||| |||||||||||||||| || |||||||||||||||||| Sbjct: 386 ttatattgatgctttatcacattgccttttattttattatttaattcatagaccatacat 327 Query: 530 agtggaattctatatcttatttatttcctcttccttctttctatc 574 | |||||| ||||||||| |||||| ||||||||||||||||| Sbjct: 326 attggaatcctatatctttcttattt-atcttccttctttctatc 283
>gb|AF133464.1|AF133464 Lithachne pauciflora ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1189 Score = 394 bits (199), Expect = e-106 Identities = 403/471 (85%), Gaps = 8/471 (1%) Strand = Plus / Minus Query: 111 actcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaatattt 170 |||||||||||||||| ||||||| ||| | ||||||||| ||||||||||||||||||| Sbjct: 758 actcttattgaatcgcagtaaagttttccacttcaataaggatttcgcgggcgaatattt 699 Query: 171 actctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnnggtt 230 |||||||||| |||||||||||||||||||| ||||| ||||||||||| |||| Sbjct: 698 actctttcctatcttatttgttaatttataaccttactaaataagacaatttttttggtt 639 Query: 231 tgttccgccatcccaccc--aatgaagtgttaggattcttttcaataaaatcctatggaa 288 |||||||||||||| ||| ||||||| |||| ||||||||||| ||||| |||| | Sbjct: 638 tgttccgccatccctcccctaatgaagaattagaattcttttcaaaaaaattctatacag 579 Query: 289 tcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacg 348 ||||||||||| ||||||||||| ||||||||| ||||||||||||||||| || ||| | Sbjct: 578 tcataggttctatcgttcccactacttctcctttaatggttaggtctgaattccacaatg 519 Query: 349 gagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctc 408 ||| ||||||||||| |||||| |||| ||||||||||||||||||||||| | |||| Sbjct: 518 gagtttccaaaaaatatctttctgagtcaattttctcagttttattaaccccagttgctc 459 Query: 409 tttat-----tattgcttaaaatttgtagttcttctttcaagttacaatttttcattctc 463 |||| ||||||||||||||| || ||||| ||||||||||| |||| |||||| Sbjct: 458 cttattattgtattgcttaaaatttatatttcttgtttcaagttacgatttcaaattctc 399 Query: 464 tattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagacc 523 || || |||||||||||||||||||| | ||||||||||||||||||||| ||||||||| Sbjct: 398 taatatttttattatattgatgctttattacattgccttttatgatgtaactcatagacc 339 Query: 524 atacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||| ||| | ||| ||||| ||| ||||||||||||||||||||| Sbjct: 338 atacatgtgggagtcctacatctttatta-ttcctcttccttctttctatc 289
>gb|AY847082.1| Andropogon gerardii ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1186 Score = 392 bits (198), Expect = e-106 Identities = 316/355 (89%), Gaps = 2/355 (0%) Strand = Plus / Minus Query: 100 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 159 ||||| |||||| ||||||||||||| | |||||||||||||| ||||||| |||||||| Sbjct: 754 tccttttttttattcttattgaatcgtg-taaagtattctaatccaataaggatttcgcg 696 Query: 160 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 219 ||||||||||||||||||||||||||||||||||||||| || |||| ||||||| ||| Sbjct: 695 ggcgaatatttactctttcctgtcttatttgttaatttagaaccttatcaaataaagcaa 636 Query: 220 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 279 ||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 635 tttttttggtttgttccgccatcccacccaatgaagtgttaggattctttccaataaaat 576 Query: 280 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 339 |||||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 575 cctatgtagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaat 516 Query: 340 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 399 || |||| |||||||||||||||||||||||||||| ||||||||||||||||||||| | Sbjct: 515 cctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttattaactc 456 Query: 400 gggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaattt 454 ||| ||||||| ||||||||| | |||| || || || ||||||||||| |||| Sbjct: 455 -ggctgctcttttttattgctttatatttatatttgttgtttcaagttacgattt 402 Score = 81.8 bits (41), Expect = 2e-12 Identities = 72/82 (87%), Gaps = 4/82 (4%) Strand = Plus / Minus Query: 470 ttttattatattgatgctttttcacattgcc----ttttatgatgtaattcatagaccat 525 |||||||||||||||||||| | |||||||| ||||||||| ||||||||||||||| Sbjct: 377 ttttattatattgatgctttataacattgccctttttttatgatttaattcatagaccat 318 Query: 526 acacagtggaattctatatctt 547 ||||| ||||| ||||||||| Sbjct: 317 acacatcggaatcctatatctt 296
>ref|XM_481019.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2157 Score = 385 bits (194), Expect = e-103 Identities = 253/275 (92%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 276 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 217 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 216 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 157 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 156 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 97 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 96 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 37 Query: 347 cggagcttccaaaaaatttctttccgagttaattt 381 |||||||||||||||||||||||||||| ||||| Sbjct: 36 tggagcttccaaaaaatttctttccgagtcaattt 2 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 377 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 319 Query: 61 ctatattta 69 ||||||||| Sbjct: 318 ctatattta 310
>ref|XM_507181.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0036E18.24 mRNA Length = 2157 Score = 385 bits (194), Expect = e-103 Identities = 253/275 (92%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 276 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 217 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 216 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 157 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 156 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 97 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 96 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 37 Query: 347 cggagcttccaaaaaatttctttccgagttaattt 381 |||||||||||||||||||||||||||| ||||| Sbjct: 36 tggagcttccaaaaaatttctttccgagtcaattt 2 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 377 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 319 Query: 61 ctatattta 69 ||||||||| Sbjct: 318 ctatattta 310
>gb|AY847079.1| Merxmuellera rangei ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1166 Score = 385 bits (194), Expect = e-103 Identities = 293/327 (89%), Gaps = 1/327 (0%) Strand = Plus / Minus Query: 102 cttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcggg 161 ||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 736 cttatttttactcttattgaatcatggtaaagtattctaattcaataaagatt-cgcggg 678 Query: 162 cgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaann 221 ||||||||||||||||||||||||||||| ||||||| || |||||||||||| || Sbjct: 677 cgaatatttactctttcctgtcttatttggtaatttagaatcttaccaaataaagtaatt 618 Query: 222 nnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcc 281 |||||||||||||||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 617 tttttggtttgttccgccatcccacccaatgaagtattaggattcttttcaatacaatcc 558 Query: 282 tatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcc 341 |||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| Sbjct: 557 tatgtagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcc 498 Query: 342 cgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgg 401 |||| |||||||||||||||| ||||||||||| ||||||||||||||||||| ||||| Sbjct: 497 tgcaatggagcttccaaaaaatatctttccgagtcaattttctcagttttattaccccgg 438 Query: 402 gcggctctttattattgcttaaaattt 428 || |||||||||||||| || |||||| Sbjct: 437 gctgctctttattattggtttaaattt 411 Score = 123 bits (62), Expect = 7e-25 Identities = 74/78 (94%) Strand = Plus / Minus Query: 470 ttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacac 529 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 372 ttttattatattgatgctttatcacattgccttttatgatgtaattcataaaccatacac 313 Query: 530 agtggaattctatatctt 547 | |||||| ||||||||| Sbjct: 312 attggaatcctatatctt 295
>ref|XM_479424.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2154 Score = 385 bits (194), Expect = e-103 Identities = 253/275 (92%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 276 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 217 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 216 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 157 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 156 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 97 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 96 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 37 Query: 347 cggagcttccaaaaaatttctttccgagttaattt 381 |||||||||||||||||||||||||||| ||||| Sbjct: 36 tggagcttccaaaaaatttctttccgagtcaattt 2 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 376 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 318 Query: 61 ctatattta 69 ||||||||| Sbjct: 317 ctatattta 309
>ref|XM_479423.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2154 Score = 385 bits (194), Expect = e-103 Identities = 253/275 (92%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 276 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 217 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 216 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 157 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 156 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 97 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 96 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 37 Query: 347 cggagcttccaaaaaatttctttccgagttaattt 381 |||||||||||||||||||||||||||| ||||| Sbjct: 36 tggagcttccaaaaaatttctttccgagtcaattt 2 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 376 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 318 Query: 61 ctatattta 69 ||||||||| Sbjct: 317 ctatattta 309
>dbj|AK105308.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-B12, full insert sequence Length = 2166 Score = 385 bits (194), Expect = e-103 Identities = 253/275 (92%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 276 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 217 Query: 167 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 226 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 216 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 157 Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 156 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 97 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 96 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 37 Query: 347 cggagcttccaaaaaatttctttccgagttaattt 381 |||||||||||||||||||||||||||| ||||| Sbjct: 36 tggagcttccaaaaaatttctttccgagtcaattt 2 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 386 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 328 Query: 61 ctatattta 69 ||||||||| Sbjct: 327 ctatattta 319
>gb|AY847087.1| Danthoniopsis petiolata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1147 Score = 383 bits (193), Expect = e-103 Identities = 289/322 (89%), Gaps = 1/322 (0%) Strand = Plus / Minus Query: 100 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 159 |||||||||||| ||||||||||||| | |||||||||||||| |||||| |||||||| Sbjct: 732 tccttatttttattcttattgaatcgtg-taaagtattctaatccaataaagatttcgcg 674 Query: 160 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 219 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 673 ggcgaatatttactctttcctgtcttatttgttaatttataaccttaccaaataaagcaa 614 Query: 220 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 279 |||||||||||||||||||||||||||||| ||||||||||||| | |||||| Sbjct: 613 tttttttggtttgttccgccatcccacccaatgaagtattaggattctttttactaaaat 554 Query: 280 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 339 |||||| | ||||||||| |||||||||||| ||||||| || ||||||||||| ||||| Sbjct: 553 cctatgcagtcataggttttgtcgttcccacagcttctcttttaatggttaggtttgaat 494 Query: 340 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 399 || |||| |||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 493 cctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttatcaaccg 434 Query: 400 gggcggctctttattattgctt 421 |||| ||||||| ||||||||| Sbjct: 433 gggctgctcttttttattgctt 412 Score = 89.7 bits (45), Expect = 9e-15 Identities = 93/105 (88%), Gaps = 3/105 (2%) Strand = Plus / Minus Query: 470 ttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacac 529 |||||||||||||||||||| |||||||||| ||||||| || |||| |||||||||||| Sbjct: 368 ttttattatattgatgctttatcacattgcc-tttatga-gttattcctagaccatacac 311 Query: 530 agtggaattctatatcttatttatttcctcttccttctttctatc 574 | |||||| ||||||||| ||| ||| |||||||||| |||||| Sbjct: 310 attggaatcctatatctttctta-ttcttcttccttctatctatc 267
>gb|AY847114.1| Spartochloa scirpoidea ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1176 Score = 377 bits (190), Expect = e-101 Identities = 309/350 (88%), Gaps = 2/350 (0%) Strand = Plus / Minus Query: 100 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 159 |||||||||||| ||||||||||||| | ||||||||||||| ||||||| ||||||| Sbjct: 754 tccttatttttattcttattgaatcgtg--aaagtattctaatccaataagggtttcgcg 697 Query: 160 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 219 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 696 ggcgaatatttactctttcctgtcttatttgttaatttataaccttaccaaataaagcaa 637 Query: 220 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 279 |||||||||||||||||||||||||||||| |||||||||||||||| ||||| Sbjct: 636 tttttttggtttgttccgccatcccacccaatgaagtattaggattcttttcaagaaaat 577 Query: 280 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 339 |||||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 576 cctatgcagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaat 517 Query: 340 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 399 || |||| |||||||| ||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 516 cctgcaatggagcttctaaaaaatggatttccgagtcaattttctcagttttattaaccc 457 Query: 400 gggcggctctttattattgcttaaaatttgtagttcttctttcaagttac 449 ||| ||||||| ||||||||| |||||| || || || ||| ||||||| Sbjct: 456 cggctgctcttttttattgctttaaatttttatttattgtttgaagttac 407 Score = 111 bits (56), Expect = 3e-21 Identities = 87/96 (90%), Gaps = 1/96 (1%) Strand = Plus / Minus Query: 479 attgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaatt 538 ||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||| Sbjct: 368 attgatgctttatcacattgccttttatgatgtaattcatagcccatacacattggaatc 309 Query: 539 ctatatcttatttatttcctcttccttctttctatc 574 ||||||||| ||| ||| |||||||||| |||||| Sbjct: 308 ctatatctttctta-ttcttcttccttctatctatc 274
>gb|AY847112.1| Cyperochloa hirsuta ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 931 Score = 377 bits (190), Expect = e-101 Identities = 313/355 (88%), Gaps = 1/355 (0%) Strand = Plus / Minus Query: 100 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 159 |||||||||||| ||||||||||||| | ||||||||| |||| |||||| |||||||| Sbjct: 509 tccttatttttattcttattgaatcgtg-taaagtattttaatccaataaagatttcgcg 451 Query: 160 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 219 ||||||||||||||||||||||| |||||||||||||||||| |||||||||||| | | Sbjct: 450 ggcgaatatttactctttcctgttttatttgttaatttataaccttaccaaataaagcca 391 Query: 220 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 279 |||||||||||||||||||||||||||||| |||||||||||||||| ||||| Sbjct: 390 tttttttggtttgttccgccatcccacccaatgaagtattaggattcttttcaagaaaat 331 Query: 280 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 339 |||||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 330 cctatgcagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaat 271 Query: 340 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 399 || |||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 270 cctgcaatggagcttccaaaaaatttatttccgagtcaattttctcagttttattaaccc 211 Query: 400 gggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaattt 454 ||| ||||||| || |||||| |||||| || || || ||| ||||||| |||| Sbjct: 210 cggctgctcttttttgttgctttaaatttttatttattgtttgaagttacgattt 156 Score = 123 bits (62), Expect = 7e-25 Identities = 71/74 (95%) Strand = Plus / Minus Query: 474 attatattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtg 533 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 127 attatattgatgctttatcacattgccttttatgatgtaattcatagaccatacacattg 68 Query: 534 gaattctatatctt 547 |||| ||||||||| Sbjct: 67 gaatcctatatctt 54
>gb|AY912197.1| Neurolepis nana ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1230 Score = 377 bits (190), Expect = e-101 Identities = 264/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 152 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 206 |||||||||||||||||||||||||| |||||||||||||||||||||| | |||| Sbjct: 726 atttcgcgggcgaatatttactcttttctgtcttatttgttaatttatattataacctta 667 Query: 207 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 266 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 666 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 607 Query: 267 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 326 ||||||||||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 606 ttttcaataaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 547 Query: 327 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 386 ||||||||||||| || ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 546 gttaggtctgaattccacaatggagcttccaaaaaatttctttccgagtcaattttctca 487 Query: 387 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 437 ||||||||||||||||| ||||||||||||||||| ||||||||| ||||| Sbjct: 486 gttttattaacccgggccgctctttattattgcttcaaatttgtatttctt 436 Score = 137 bits (69), Expect = 4e-29 Identities = 106/117 (90%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 458 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 517 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 426 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 367 Query: 518 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||||||||| | |||||| ||||||||| ||| ||||||||| ||||||||||| Sbjct: 366 tagaccatacatattggaatcctatatctttctta-ttcctcttctttctttctatc 311 Score = 61.9 bits (31), Expect = 2e-06 Identities = 92/110 (83%), Gaps = 7/110 (6%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||| ||||| ||||||||| || |||||||||||||||| Sbjct: 836 atctagaatatatctag-atgcgtgtgtctatttatctgtattatatatttatagataat 778 Query: 78 aatgtagtccttctaaaaaata---tccttatttttactcttattgaatc 124 ||| || |||||||||| | ||||||||||||||||||||||||| Sbjct: 777 ---gtaatctttctaaaaaaaaatctccttatttttactcttattgaatc 731
>gb|AY912194.1| Chusquea bambusoides ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1174 Score = 377 bits (190), Expect = e-101 Identities = 264/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 152 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 206 ||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 687 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttatattataacctta 628 Query: 207 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 266 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 627 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 568 Query: 267 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 326 |||||||||| |||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 567 ttttcaataagatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 508 Query: 327 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 386 |||||||||||||||| ||| ||||||| |||||||||||||||||||| |||||||||| Sbjct: 507 gttaggtctgaatcccacaatggagcttacaaaaaatttctttccgagtcaattttctca 448 Query: 387 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 437 ||||||||||||||||| ||||||||||||||||| ||||||||| ||||| Sbjct: 447 gttttattaacccgggccgctctttattattgcttcaaatttgtatttctt 397 Score = 137 bits (69), Expect = 4e-29 Identities = 106/117 (90%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 458 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 517 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 387 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 328 Query: 518 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||||||||| | |||||| ||||||||| ||| ||||||||| ||||||||||| Sbjct: 327 tagaccatacatattggaatcctatatctttctta-ttcctcttctttctttctatc 272 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 92 aaaaaatatccttatttttactcttattgaatc 124 |||| |||||||||||||||||||||||||||| Sbjct: 724 aaaatatatccttatttttactcttattgaatc 692
>gb|U62786.1|COU62786 Chusquea oxylepis ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1032 Score = 377 bits (190), Expect = e-101 Identities = 264/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 152 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 206 ||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 696 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttatattataacctta 637 Query: 207 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 266 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 636 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 577 Query: 267 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 326 |||||||||| |||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 576 ttttcaataagatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 517 Query: 327 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 386 |||||||||||||||| ||| ||||||| |||||||||||||||||||| |||||||||| Sbjct: 516 gttaggtctgaatcccacaatggagcttacaaaaaatttctttccgagtcaattttctca 457 Query: 387 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 437 ||||||||||||||||| ||||||||||||||||| ||||||||| ||||| Sbjct: 456 gttttattaacccgggccgctctttattattgcttcaaatttgtatttctt 406 Score = 137 bits (69), Expect = 4e-29 Identities = 106/117 (90%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 458 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 517 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 396 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 337 Query: 518 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||||||||| | |||||| ||||||||| ||| ||||||||| ||||||||||| Sbjct: 336 tagaccatacatattggaatactatatctttctta-ttcctcttctttctttctatc 281 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Minus Query: 92 aaaaaatatccttatttttactcttattgaatc 124 ||||||||||||||||||||||||||||||||| Sbjct: 733 aaaaaatatccttatttttactcttattgaatc 701
>gb|U62780.1|CAU62780 Chusquea aff. fendleri ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 377 bits (190), Expect = e-101 Identities = 264/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 152 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 206 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 694 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 635 Query: 207 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 266 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 634 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 575 Query: 267 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 326 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 574 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 515 Query: 327 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 386 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 514 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 455 Query: 387 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 437 ||||||||||||||||| ||||||||||||||||| ||||||||| ||||| Sbjct: 454 gttttattaacccgggccgctctttattattgcttcaaatttgtatttctt 404 Score = 137 bits (69), Expect = 4e-29 Identities = 106/117 (90%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 458 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 517 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 518 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||||||||| | |||||| ||||||||| ||| ||||||||| ||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttctta-ttcctcttctttctttctatc 279 Score = 69.9 bits (35), Expect = 9e-09 Identities = 93/110 (84%), Gaps = 7/110 (6%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||| || |||||||||||||||| Sbjct: 804 atctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttatagataat 746 Query: 78 aatgtagtccttct---aaaaaatatccttatttttactcttattgaatc 124 ||| || |||| ||||||||||||||||||||||||||||||||| Sbjct: 745 ---gtaatctttcttaaaaaaaatatccttatttttactcttattgaatc 699
>gb|AY847093.1| Thysanolaena latifolia ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1182 Score = 373 bits (188), Expect = e-100 Identities = 319/364 (87%), Gaps = 2/364 (0%) Strand = Plus / Minus Query: 101 ccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgg 160 ||||||||||| ||||||||||||| | |||||||| |||| |||||| ||||||||| Sbjct: 755 ccttatttttattcttattgaatcgtg--aaagtattataatccaataaagatttcgcgg 698 Query: 161 gcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaan 220 | ||| ||||||||||||||||| ||||||||||||||||| |||||||||||| ||| Sbjct: 697 gggaaaatttactctttcctgtcatatttgttaatttataaccttaccaaataaagcaat 638 Query: 221 nnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatc 280 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct: 637 ttttttggtttgttccgccatcccaaccaatgaagtattaggattcttttcaataaaatc 578 Query: 281 ctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatc 340 ||||| | ||||||||| |||||||||||| |||||||||| ||||||||||| |||||| Sbjct: 577 ctatgcagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatc 518 Query: 341 ccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccg 400 | |||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||| Sbjct: 517 ctgcaatggagcttccaaaaaatttatttccgagtcaattttctcagttttattaacccg 458 Query: 401 ggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcatt 460 ||| ||||||| ||||||||| ||||| || || || ||| ||||||| ||||| ||| Sbjct: 457 ggctgctcttttttattgctttcaatttttatttattgtttgaagttacgattttgaatt 398 Query: 461 ctct 464 |||| Sbjct: 397 ctct 394 Score = 131 bits (66), Expect = 3e-27 Identities = 97/106 (91%), Gaps = 1/106 (0%) Strand = Plus / Minus Query: 469 gttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccataca 528 |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 380 gtttaattatattgatgctttatcacattgccttttatgatgtaattcatagaccataca 321 Query: 529 cagtggaattctatatcttatttatttcctcttccttctttctatc 574 || |||||| ||||||||| ||| ||| |||||||||| |||||| Sbjct: 320 cattggaatcctatatctttctta-ttcttcttccttctatctatc 276
>gb|AF133479.1|AF133479 Eleusine indica ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1091 Score = 371 bits (187), Expect = 2e-99 Identities = 412/488 (84%), Gaps = 21/488 (4%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 |||||| ||||||||||| ||||||||||||||| |||||| ||||||||||||||| Sbjct: 782 ttttacccttattgaatcatagtaaagtattctaatccaataaagatttcgcgggcgaat 723 Query: 167 atttactctttcctgtcttatttgttaatttataaactt------accaaataagacaan 220 |||||||||||| |||||||||||||||||||||| ||| | ||||||| |||| Sbjct: 722 atttactctttcttgtcttatttgttaatttataaccttattaaaatcaaataaaacaat 663 Query: 221 nnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatc 280 |||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 662 ttttttggtttgttccgccatcccgcccaatgaagtattaggattcttttcaataaaatc 603 Query: 281 ----ctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctg 336 ||||| | ||||||||| |||||||||||| |||||||||| ||||||||||| || Sbjct: 602 aatcctatgcagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttg 543 Query: 337 aatcccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaa 396 ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||| Sbjct: 542 aatcctgcaacggagcttccaaacttaaactttccgagttaattttcttagttttattaa 483 Query: 397 cccgggcggctctttattattgcttaaaatttgtagttcttctttc--aagttacaattt 454 || |||| |||||||||||||||||||||||| || || || |||| || ||| |||| Sbjct: 482 cctgggctgctctttattattgcttaaaatttttatttattgtttcaaaaattatgattt 423 Query: 455 ttcattctctattagttttatta--------tattgatgctttttcacattgccttttat 506 | ||||||| ||| |||||||| |||||||||||| |||||||||||||||| Sbjct: 422 taaattctctcttatttttattattttattatattgatgctttatcacattgccttttat 363 Query: 507 gatgtaattcatagaccatacacagtggaattctatatcttatttatttcctcttccttc 566 |||||||||||||||||||||||| |||||| |||||||| ||| ||| ||||||||| Sbjct: 362 gatgtaattcatagaccatacacattggaatcttatatctttctta-ttcttcttccttc 304 Query: 567 tttctatc 574 | |||||| Sbjct: 303 tatctatc 296
>gb|AY847098.1| Chasmanthium latifolium ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1132 Score = 369 bits (186), Expect = 7e-99 Identities = 357/413 (86%), Gaps = 5/413 (1%) Strand = Plus / Minus Query: 137 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 196 |||||| |||||| ||||||||||||||||||||||| | || ||| | |||| |||| Sbjct: 679 tctaatccaataaagatttcgcgggcgaatatttactcatgccagtcct--ttgt-aatt 623 Query: 197 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 256 |||| |||||||||||| ||| || | | ||||||||||||||||||||||| Sbjct: 622 gataaccttaccaaataaagcaatttttttggctaggtccgccatcccacccaatgaagt 563 Query: 257 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 316 |||||||||||||||||||||||||||| | ||||||||| | |||||||||| ||||| Sbjct: 562 attaggattcttttcaataaaatcctatgcagtcataggttttctcgttcccacagcttc 503 Query: 317 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 376 ||||| |||||||||| ||||||| |||| |||||||||||||||||||||||||||| Sbjct: 502 tcctttcatggttaggtttgaatcctgcaatggagcttccaaaaaatttctttccgagtc 443 Query: 377 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 436 ||||||||||||||||||||||| ||| ||||||| ||||||||| ||||| || || | Sbjct: 442 aattttctcagttttattaacccaggctgctcttttttattgctttcaatttttatttat 383 Query: 437 tctttcaagttacaatttttcat--tctctattagttttattatattgatgctttttcac 494 | |||||||||||||||| || ||||| || |||||||||||||||||||| |||| Sbjct: 382 tgtttcaagttacaatttcgaattctctcttttttttttattatattgatgctttatcac 323 Query: 495 attgccttttatgatgtaattcatagaccatacacagtggaattctatatctt 547 |||||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 322 attgccttttatgatgtaattcatagaccatacacattggaatcctatatctt 270
>gb|AY912195.1| Chusquea culeou ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1181 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 152 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 206 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 692 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 633 Query: 207 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 266 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 632 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 573 Query: 267 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 326 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 572 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 513 Query: 327 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 386 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 512 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 453 Query: 387 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 437 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 452 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 402 Score = 137 bits (69), Expect = 4e-29 Identities = 106/117 (90%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 458 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 517 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 392 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 333 Query: 518 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||||||||| | |||||| ||||||||| ||| ||||||||| ||||||||||| Sbjct: 332 tagaccatacatattggaatcctatatctttctta-ttcctcttctttctttctatc 277 Score = 65.9 bits (33), Expect = 1e-07 Identities = 93/111 (83%), Gaps = 8/111 (7%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||| || ||||||||||| || Sbjct: 803 atctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttatag---at 748 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatc 124 |||||| || |||| ||||||||||||||||||||||||||||||||| Sbjct: 747 aatgtaatctttcttaaaaaaaaatatccttatttttactcttattgaatc 697
>gb|AF133472.1|AF133472 Chusquea ramosissima ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1193 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 152 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 206 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 718 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 659 Query: 207 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 266 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 658 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 599 Query: 267 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 326 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 598 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 539 Query: 327 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 386 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 538 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 479 Query: 387 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 437 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 478 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 428 Score = 137 bits (69), Expect = 4e-29 Identities = 106/117 (90%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 458 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 517 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 418 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 359 Query: 518 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||||||||| | |||||| ||||||||| ||| ||||||||| ||||||||||| Sbjct: 358 tagaccatacatattggaatcctatatctttctta-ttcctcttctttctttctatc 303 Score = 52.0 bits (26), Expect = 0.002 Identities = 91/111 (81%), Gaps = 8/111 (7%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||| || ||||||||||| || Sbjct: 829 atctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttatag---at 774 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatc 124 |||||| || |||| ||||||| |||||| |||||||||||||||||| Sbjct: 773 aatgtaatctttcttaaaaaaaaatctccttanttttactcttattgaatc 723
>gb|U62793.1|NAU62793 Neurolepis aperta ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1052 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 152 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 206 ||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 695 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttatattataacctta 636 Query: 207 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 266 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 635 ccaaataaggcaattcttttggtttgttccgccatcccacccaatgaagtattaggattc 576 Query: 267 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 326 ||||||||||||||||||| | ||||||||||||||||||||||| |||||| || |||| Sbjct: 575 ttttcaataaaatcctatgcagtcataggttctgtcgttcccactacttctcgtttaatg 516 Query: 327 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 386 ||||||||||||| || ||| ||||||||||||||| |||||||| ||| |||||||||| Sbjct: 515 gttaggtctgaattccacaatggagcttccaaaaaaattctttccaagtcaattttctca 456 Query: 387 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 437 ||||||||||||||||| ||||||||||||||||||||||||||| ||||| Sbjct: 455 gttttattaacccgggccgctctttattattgcttaaaatttgtatttctt 405 Score = 121 bits (61), Expect = 3e-24 Identities = 104/117 (88%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 458 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 517 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 395 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 336 Query: 518 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||||||||| | ||||| ||||||||| ||| ||||||||| || |||||||| Sbjct: 335 tagaccatacatataggaatcctatatctttctta-ttcctcttctttttttctatc 280 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/60 (86%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||| ||||||||| || ||||||||| ||||| |||| || ||||||||||||||||| Sbjct: 825 atctggaatatatctag-atgtgtgtgtctatttttctatattctatatttatagataat 767 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 100 tccttatttttactcttattgaatc 124 ||||||||||||||||||||||||| Sbjct: 737 tccttatttttactcttattgaatc 713
>gb|U62789.1|CTU62789 Chusquea talamancensis ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 152 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 206 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 694 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 635 Query: 207 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 266 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 634 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 575 Query: 267 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 326 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 574 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 515 Query: 327 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 386 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 514 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 455 Query: 387 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 437 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 454 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 404 Score = 137 bits (69), Expect = 4e-29 Identities = 106/117 (90%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 458 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 517 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 518 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||||||||| | |||||| ||||||||| ||| ||||||||| ||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttctta-ttcctcttctttctttctatc 279 Score = 69.9 bits (35), Expect = 9e-09 Identities = 93/110 (84%), Gaps = 7/110 (6%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||| || |||||||||||||||| Sbjct: 804 atctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttatagataat 746 Query: 78 aatgtagtccttct---aaaaaatatccttatttttactcttattgaatc 124 ||| || |||| ||||||||||||||||||||||||||||||||| Sbjct: 745 ---gtaatctttcttaaaaaaaatatccttatttttactcttattgaatc 699
>gb|U62788.1|CSU62788 Chusquea spencei ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 152 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 206 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 694 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 635 Query: 207 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 266 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 634 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 575 Query: 267 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 326 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 574 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 515 Query: 327 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 386 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 514 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 455 Query: 387 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 437 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 454 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 404 Score = 137 bits (69), Expect = 4e-29 Identities = 106/117 (90%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 458 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 517 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 518 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||||||||| | |||||| ||||||||| ||| ||||||||| ||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttctta-ttcctcttctttctttctatc 279 Score = 69.9 bits (35), Expect = 9e-09 Identities = 93/110 (84%), Gaps = 7/110 (6%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||| || |||||||||||||||| Sbjct: 804 atctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttatagataat 746 Query: 78 aatgtagtccttct---aaaaaatatccttatttttactcttattgaatc 124 ||| || |||| ||||||||||||||||||||||||||||||||| Sbjct: 745 ---gtaatctttcttaaaaaaaatatccttatttttactcttattgaatc 699
>gb|U62787.1|CSU62787 Chusquea sp. A ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 152 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 206 ||||||||||||||||||||||||||||| ||||||||||||||||||| | |||| Sbjct: 697 atttcgcgggcgaatatttactctttcctatcttatttgttaatttatattataacctta 638 Query: 207 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 266 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 637 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 578 Query: 267 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 326 |||||||||| |||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 577 ttttcaataagatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 518 Query: 327 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 386 |||||||||||||||| ||| ||||||| |||||||||||||||||||| |||||||||| Sbjct: 517 gttaggtctgaatcccacaatggagctttcaaaaaatttctttccgagtcaattttctca 458 Query: 387 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 437 ||||||||||||||||| ||||||||||||||||| ||||||||| ||||| Sbjct: 457 gttttattaacccgggccgctctttattattgcttcaaatttgtatttctt 407 Score = 129 bits (65), Expect = 1e-26 Identities = 105/117 (89%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 458 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 517 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 397 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 338 Query: 518 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||||||||| | |||||| | ||||||| ||| ||||||||| ||||||||||| Sbjct: 337 tagaccatacatattggaatcccatatctttctta-ttcctcttctttctttctatc 282 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Minus Query: 92 aaaaaatatccttatttttactcttattgaatc 124 ||||||||||||||||||||||||||||||||| Sbjct: 734 aaaaaatatccttatttttactcttattgaatc 702
>gb|U62785.1|COU62785 Chusquea oligophylla ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1032 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 152 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 206 |||||||||||| |||||||||||||||||||||||||||||||||||| | |||| Sbjct: 696 atttcgcgggcggatatttactctttcctgtcttatttgttaatttatattataacctta 637 Query: 207 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 266 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 636 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 577 Query: 267 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 326 ||||||||||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 576 ttttcaataaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 517 Query: 327 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 386 |||||||||||||||| ||| ||||||| |||||||||||||||||||| |||||||||| Sbjct: 516 gttaggtctgaatcccacaatggagcttacaaaaaatttctttccgagtcaattttctca 457 Query: 387 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 437 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 456 gttttattaacccgggccgctctttattattgcttcaaatttctatttctt 406 Score = 129 bits (65), Expect = 1e-26 Identities = 105/117 (89%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 458 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 517 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 396 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 337 Query: 518 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||||||||| | |||||| | ||||||| ||| ||||||||| ||||||||||| Sbjct: 336 tagaccatacatattggaatcccatatctttctta-ttcctcttctttctttctatc 281 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Minus Query: 92 aaaaaatatccttatttttactcttattgaatc 124 ||||||||||||||||||||||||||||||||| Sbjct: 733 aaaaaatatccttatttttactcttattgaatc 701
>gb|U62784.1|CEU62784 Chusquea exasperata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1032 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 152 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 206 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 694 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 635 Query: 207 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 266 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 634 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 575 Query: 267 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 326 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 574 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 515 Query: 327 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 386 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 514 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtcaattttctca 455 Query: 387 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 437 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 454 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 404 Score = 137 bits (69), Expect = 4e-29 Identities = 106/117 (90%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 458 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 517 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 518 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||||||||| | |||||| ||||||||| ||| ||||||||| ||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttctta-ttcctcttctttctttctatc 279 Score = 58.0 bits (29), Expect = 3e-05 Identities = 92/111 (82%), Gaps = 8/111 (7%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||| || ||||||||||| || Sbjct: 805 atctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttatag---at 750 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatc 124 |||||| || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 749 aatgtaatctttcttaaaaaaaaatctccttatttttactcttattgaatc 699
>gb|U54752.1|CTU54752 Chusquea tessellata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1031 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 152 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 206 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 694 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 635 Query: 207 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 266 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 634 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 575 Query: 267 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 326 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 574 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 515 Query: 327 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 386 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 514 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 455 Query: 387 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 437 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 454 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 404 Score = 137 bits (69), Expect = 4e-29 Identities = 106/117 (90%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 458 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 517 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 518 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||||||||| | |||||| ||||||||| ||| ||||||||| ||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttctta-ttcctcttctttctttctatc 279 Score = 69.9 bits (35), Expect = 9e-09 Identities = 93/110 (84%), Gaps = 7/110 (6%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||| || |||||||||||||||| Sbjct: 804 atctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttatagataat 746 Query: 78 aatgtagtccttct---aaaaaatatccttatttttactcttattgaatc 124 ||| || |||| ||||||||||||||||||||||||||||||||| Sbjct: 745 ---gtaatctttcttaaaaaaaatatccttatttttactcttattgaatc 699
>gb|U54758.1|CSU54758 Chusquea sp. 'LC et al. 1309' ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1035 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 152 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 206 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 695 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 636 Query: 207 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 266 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 635 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 576 Query: 267 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 326 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 575 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 516 Query: 327 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 386 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 515 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 456 Query: 387 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 437 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 455 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 405 Score = 137 bits (69), Expect = 4e-29 Identities = 106/117 (90%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 458 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 517 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 395 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 336 Query: 518 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||||||||| | |||||| ||||||||| ||| ||||||||| ||||||||||| Sbjct: 335 tagaccatacatattggaatcctatatctttctta-ttcctcttctttctttctatc 280 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 92 aaaaaatatccttatttttactcttattgaatc 124 ||||||| ||||||||||||||||||||||||| Sbjct: 732 aaaaaatctccttatttttactcttattgaatc 700
>gb|U54754.1|CSU54754 Chusquea serpens ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1031 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 152 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 206 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 694 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 635 Query: 207 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 266 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 634 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 575 Query: 267 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 326 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 574 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 515 Query: 327 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 386 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 514 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 455 Query: 387 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 437 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 454 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 404 Score = 137 bits (69), Expect = 4e-29 Identities = 106/117 (90%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 458 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 517 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 518 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||||||||| | |||||| ||||||||| ||| ||||||||| ||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttctta-ttcctcttctttctttctatc 279 Score = 58.0 bits (29), Expect = 3e-05 Identities = 92/111 (82%), Gaps = 8/111 (7%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||| || ||||||||||| || Sbjct: 805 atctagaatatatctag-atgtgtgtgtctatttatccttattatatatttatag---at 750 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatc 124 |||||| || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 749 aatgtaatctttcttaaaaaaaaatctccttatttttactcttattgaatc 699
>gb|U54753.1|CSU54753 Chusquea subtessellata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1031 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 152 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 206 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 694 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 635 Query: 207 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 266 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 634 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 575 Query: 267 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 326 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 574 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 515 Query: 327 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 386 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 514 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 455 Query: 387 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 437 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 454 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 404 Score = 137 bits (69), Expect = 4e-29 Identities = 106/117 (90%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 458 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 517 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 518 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||||||||| | |||||| ||||||||| ||| ||||||||| ||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttctta-ttcctcttctttctttctatc 279 Score = 69.9 bits (35), Expect = 9e-09 Identities = 93/110 (84%), Gaps = 7/110 (6%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||| || |||||||||||||||| Sbjct: 804 atctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttatagataat 746 Query: 78 aatgtagtccttct---aaaaaatatccttatttttactcttattgaatc 124 ||| || |||| ||||||||||||||||||||||||||||||||| Sbjct: 745 ---gtaatctttcttaaaaaaaatatccttatttttactcttattgaatc 699
>gb|U54751.1|CRU54751 Chusquea ramosissima ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1032 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 152 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 206 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 694 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 635 Query: 207 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 266 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 634 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 575 Query: 267 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 326 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 574 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 515 Query: 327 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 386 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 514 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 455 Query: 387 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 437 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 454 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 404 Score = 137 bits (69), Expect = 4e-29 Identities = 106/117 (90%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 458 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 517 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 518 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||||||||| | |||||| ||||||||| ||| ||||||||| ||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttctta-ttcctcttctttctttctatc 279 Score = 58.0 bits (29), Expect = 3e-05 Identities = 92/111 (82%), Gaps = 8/111 (7%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||| || ||||||||||| || Sbjct: 805 atctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttatag---at 750 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatc 124 |||||| || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 749 aatgtaatctttcttaaaaaaaaatctccttatttttactcttattgaatc 699
>gb|U54760.1|CLU54760 Chusquea liebmannii ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1032 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 152 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 206 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 694 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 635 Query: 207 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 266 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 634 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 575 Query: 267 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 326 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 574 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 515 Query: 327 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 386 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 514 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtcaattttctca 455 Query: 387 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 437 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 454 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 404 Score = 137 bits (69), Expect = 4e-29 Identities = 106/117 (90%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 458 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 517 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 518 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||||||||| | |||||| ||||||||| ||| ||||||||| ||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttctta-ttcctcttctttctttctatc 279 Score = 58.0 bits (29), Expect = 3e-05 Identities = 92/111 (82%), Gaps = 8/111 (7%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||| || ||||||||||| || Sbjct: 805 atctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttatag---at 750 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatc 124 |||||| || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 749 aatgtaatctttcttaaaaaaaaatctccttatttttactcttattgaatc 699
>gb|U54759.1|CCU54759 Chusquea coronalis ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1031 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 152 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 206 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 693 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 634 Query: 207 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 266 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 633 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 574 Query: 267 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 326 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 573 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 514 Query: 327 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 386 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 513 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtcaattttctca 454 Query: 387 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 437 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 453 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 403 Score = 137 bits (69), Expect = 4e-29 Identities = 106/117 (90%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 458 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 517 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 393 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 334 Query: 518 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||||||||| | |||||| ||||||||| ||| ||||||||| ||||||||||| Sbjct: 333 tagaccatacatattggaatcctatatctttctta-ttcctcttctttctttctatc 278 Score = 58.0 bits (29), Expect = 3e-05 Identities = 92/111 (82%), Gaps = 8/111 (7%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||| || ||||||||||| || Sbjct: 804 atctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttatag---at 749 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatc 124 |||||| || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 748 aatgtaatctttcttaaaaaaaaatctccttatttttactcttattgaatc 698
>gb|U54757.1|CBU54757 Chusquea bilimekii ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1033 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 152 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 206 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 695 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 636 Query: 207 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 266 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 635 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 576 Query: 267 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 326 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 575 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 516 Query: 327 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 386 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 515 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 456 Query: 387 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 437 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 455 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 405 Score = 137 bits (69), Expect = 4e-29 Identities = 106/117 (90%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 458 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 517 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 395 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 336 Query: 518 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||||||||| | |||||| ||||||||| ||| ||||||||| ||||||||||| Sbjct: 335 tagaccatacatattggaatcctatatctttctta-ttcctcttctttctttctatc 280 Score = 58.0 bits (29), Expect = 3e-05 Identities = 92/111 (82%), Gaps = 8/111 (7%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||| || ||||||||||| || Sbjct: 806 atctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttatag---at 751 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatc 124 |||||| || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 750 aatgtaatctttcttaaaaaaaaatctccttatttttactcttattgaatc 700
>gb|U62781.1|CSU62781 Chusquea scandens ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 367 bits (185), Expect = 3e-98 Identities = 256/282 (90%), Gaps = 5/282 (1%) Strand = Plus / Minus Query: 152 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 206 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 694 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 635 Query: 207 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 266 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 634 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 575 Query: 267 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 326 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 574 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 515 Query: 327 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 386 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 514 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 455 Query: 387 gttttattaacccgggcggctctttattattgcttaaaattt 428 ||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 454 gttttattaacccgggccgctctttattattgcttcaaattt 413 Score = 137 bits (69), Expect = 4e-29 Identities = 106/117 (90%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 458 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 517 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 518 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||||||||| | |||||| ||||||||| ||| ||||||||| ||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttctta-ttcctcttctttctttctatc 279 Score = 69.9 bits (35), Expect = 9e-09 Identities = 93/110 (84%), Gaps = 7/110 (6%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||| || |||||||||||||||| Sbjct: 804 atctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttatagataat 746 Query: 78 aatgtagtccttct---aaaaaatatccttatttttactcttattgaatc 124 ||| || |||| ||||||||||||||||||||||||||||||||| Sbjct: 745 ---gtaatctttcttaaaaaaaatatccttatttttactcttattgaatc 699
>gb|AF133483.1|AF133483 Zeugites pittieri ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1107 Score = 363 bits (183), Expect = 4e-97 Identities = 263/292 (90%) Strand = Plus / Minus Query: 137 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 196 |||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 742 tctaatccaataaagatttcgcgggcgaatgtttactctttcctgtcttatttgttaatt 683 Query: 197 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 256 ||||| |||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 682 tataaccttaccaaataaagcaatttttttggtttgttccgccatcccacccaatgaagt 623 Query: 257 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 316 ||||||||||||||||||||||||||| | ||||||||| | |||||||||| ||||| Sbjct: 622 attaggattcttttcaataaaatcctatccagtcataggttttttcgttcccacagcttc 563 Query: 317 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 376 ||||| ||||||||||| ||||||| |||| |||||||||||||||||||||||||||| Sbjct: 562 tcctttaatggttaggtttgaatcctgcaatggagcttccaaaaaatttctttccgagtc 503 Query: 377 aattttctcagttttattaacccgggcggctctttattattgcttaaaattt 428 ||||||||||||||||||||||||||| ||||||| ||||||||| |||||| Sbjct: 502 aattttctcagttttattaacccgggctgctcttttttattgcttgaaattt 451 Score = 131 bits (66), Expect = 3e-27 Identities = 75/78 (96%) Strand = Plus / Minus Query: 470 ttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacac 529 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 400 ttttattatattgatgctttatcacattgccttttatgatgtaattcatagaccatacac 341 Query: 530 agtggaattctatatctt 547 | |||||| ||||||||| Sbjct: 340 attggaatcctatatctt 323
>gb|U62790.1|CVU62790 Chusquea vulcanalis ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 361 bits (182), Expect = 2e-96 Identities = 262/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 152 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 206 ||||||||||||||| ||||||||||||||||||||| ||||||||||| | |||| Sbjct: 694 atttcgcgggcgaatgtttactctttcctgtcttattggttaatttatattataacctta 635 Query: 207 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 266 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 634 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 575 Query: 267 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 326 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 574 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 515 Query: 327 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 386 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 514 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 455 Query: 387 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 437 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 454 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 404 Score = 137 bits (69), Expect = 4e-29 Identities = 106/117 (90%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 458 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 517 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 518 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||||||||| | |||||| ||||||||| ||| ||||||||| ||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttctta-ttcctcttctttctttctatc 279 Score = 69.9 bits (35), Expect = 9e-09 Identities = 93/110 (84%), Gaps = 7/110 (6%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||| || |||||||||||||||| Sbjct: 804 atctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttatagataat 746 Query: 78 aatgtagtccttct---aaaaaatatccttatttttactcttattgaatc 124 ||| || |||| ||||||||||||||||||||||||||||||||| Sbjct: 745 ---gtaatctttcttaaaaaaaatatccttatttttactcttattgaatc 699
>gb|U62782.1|CTU62782 Chusquea tomentosa ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1030 Score = 361 bits (182), Expect = 2e-96 Identities = 262/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 152 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 206 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 693 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 634 Query: 207 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 266 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 633 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 574 Query: 267 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 326 ||||||| |||| |||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 573 ttttcaaaaaaaccctatgcagtcataggttctgtcgttcccactacttctcctttaatg 514 Query: 327 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 386 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 513 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 454 Query: 387 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 437 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 453 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 403 Score = 137 bits (69), Expect = 4e-29 Identities = 106/117 (90%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 458 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 517 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 393 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 334 Query: 518 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||||||||| | |||||| ||||||||| ||| ||||||||| ||||||||||| Sbjct: 333 tagaccatacatattggaatcctatatctttctta-ttcctcttctttctttctatc 278 Score = 69.9 bits (35), Expect = 9e-09 Identities = 93/110 (84%), Gaps = 7/110 (6%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||| || |||||||||||||||| Sbjct: 803 atctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttatagataat 745 Query: 78 aatgtagtccttct---aaaaaatatccttatttttactcttattgaatc 124 ||| || |||| ||||||||||||||||||||||||||||||||| Sbjct: 744 ---gtaatctttcttaaaaaaaatatccttatttttactcttattgaatc 698
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 359 bits (181), Expect = 7e-96 Identities = 277/309 (89%), Gaps = 3/309 (0%) Strand = Plus / Plus Query: 106 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 165 |||||| ||||||||||||| |||||||||||||||| ||||||| |||||||||||||| Sbjct: 80247 tttttattcttattgaatcgtggtaaagtattctaatccaataaggatttcgcgggcgaa 80306 Query: 166 tatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnn 225 ||||||||||||||||||||||||||||||||| || |||| ||||||| ||| Sbjct: 80307 tatttactctttcctgtcttatttgttaatttagaaccttatcaaataaagcaatttttt 80366 Query: 226 nggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80367 tggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 80426 Query: 286 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 345 | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| ||| Sbjct: 80427 tagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgca 80486 Query: 346 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 405 | ||||||||| || ||| ||||||||| ||||||||||||||||||||||| ||| | Sbjct: 80487 atggagcttcc--aatttttttttccgagtcaattttctcagttttattaaccc-ggctg 80543 Query: 406 ctctttatt 414 ||||||||| Sbjct: 80544 ctctttatt 80552 Score = 95.6 bits (48), Expect = 2e-16 Identities = 95/109 (87%), Gaps = 5/109 (4%) Strand = Plus / Plus Query: 470 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 525 |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 80625 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcatagaccat 80684 Query: 526 acacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||| | ||||| ||||||||| ||| ||| |||||||||| |||||| Sbjct: 80685 acatatgggaatcctatatctttctta-ttcttcttccttctatctatc 80732
>gb|AY847104.1| Zeugites sylvaticus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1051 Score = 357 bits (180), Expect = 3e-95 Identities = 291/329 (88%), Gaps = 8/329 (2%) Strand = Plus / Minus Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 597 ggtttgttccgccatcccacccaatgaagtattaggattcttttcaataaaatcctatcc 538 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| Sbjct: 537 agtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaa 478 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 477 tggagcttccaaaaaatttctttccgagtcaattttctcagttttattaacccgggctgc 418 Query: 407 tctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcattctctat 466 ||||| ||||||||| ||||| || || || ||||||||||| |||| ||||||| | Sbjct: 417 tcttttttattgcttgcaatttttatttattgtttcaagttacgatttcgaattctctct 358 Query: 467 tagttttattat--------attgatgctttttcacattgccttttatgatgtaattcat 518 | |||| |||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 357 tttttttcttattttattatattgatgctttatcacattgccttttatgatgtaattcat 298 Query: 519 agaccatacacagtggaattctatatctt 547 |||||||||||| |||||| ||||||||| Sbjct: 297 agaccatacacattggaatcctatatctt 269 Score = 107 bits (54), Expect = 4e-20 Identities = 72/78 (92%) Strand = Plus / Minus Query: 137 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 196 |||||| |||||| ||||| |||||||||| ||||||||||||||||||||||| ||||| Sbjct: 686 tctaatccaataaaaatttagcgggcgaatgtttactctttcctgtcttatttggtaatt 627 Query: 197 tataaacttaccaaataa 214 ||||| |||||||||||| Sbjct: 626 tataaccttaccaaataa 609
>gb|AY912196.1| Neurolepis aristata ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1206 Score = 353 bits (178), Expect = 4e-94 Identities = 261/291 (89%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 152 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 206 |||||||||||||| ||||||||||| ||| |||||||||||||||||| | |||| Sbjct: 704 atttcgcgggcgaaaatttactcttttctggcttatttgttaatttatattataacctta 645 Query: 207 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 266 ||||||||| ||| |||||||||||||||||||||||||||| | ||||||||| Sbjct: 644 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaaatattaggattc 585 Query: 267 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 326 ||||||||||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 584 ttttcaataaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 525 Query: 327 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 386 ||||||||||||| || ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 524 gttaggtctgaattccacaatggagcttccaaaaaatttctttccgagtcaattttctca 465 Query: 387 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 437 ||||||||||||||||| ||||||||||||||||| ||||||||| ||||| Sbjct: 464 gttttattaacccgggccgctctttattattgcttcaaatttgtatttctt 414 Score = 137 bits (69), Expect = 4e-29 Identities = 106/117 (90%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 458 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 517 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 404 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 345 Query: 518 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||||||||| | |||||| ||||||||| ||| ||||||||| ||||||||||| Sbjct: 344 tagaccatacatattggaatcctatatctttctta-ttcctcttctttctttctatc 289 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 92 aaaaaatatccttatttttactcttattgaatc 124 ||||||| ||||||||||||||||||||||||| Sbjct: 741 aaaaaatctccttatttttactcttattgaatc 709
>gb|AY847086.1| Danthoniopsis dinteri ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1152 Score = 351 bits (177), Expect = 2e-93 Identities = 285/322 (88%), Gaps = 1/322 (0%) Strand = Plus / Minus Query: 100 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 159 |||||||||||| ||||||||||||| | |||||||||||||| ||||| |||||||| Sbjct: 737 tccttatttttattcttattgaatcgtg-taaagtattctaatctaataaagatttcgcg 679 Query: 160 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 219 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 678 ggcgaatatttactctttcctgtcttatttgttaatttataaccttaccaaataaagcaa 619 Query: 220 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 279 |||||| ||||||||||||||||||||||| ||||||||||||| | ||||| Sbjct: 618 tttttttggtttgatccgccatcccacccaatgaagtattaggattctttttcaaaaaat 559 Query: 280 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 339 |||||| | ||||||||| |||||||||||| ||||||| || || |||||||| ||||| Sbjct: 558 cctatgcagtcataggttttgtcgttcccacagcttctcttttaaaggttaggtttgaat 499 Query: 340 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 399 || |||| |||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 498 cctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttatcaaccg 439 Query: 400 gggcggctctttattattgctt 421 |||| ||||||| ||||||||| Sbjct: 438 gggctgctcttttttattgctt 417 Score = 121 bits (61), Expect = 3e-24 Identities = 95/105 (90%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 470 ttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacac 529 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 371 ttttattatatcgatgctttatcacattgccttttatgatgtaattcatagaccatgcac 312 Query: 530 agtggaattctatatcttatttatttcctcttccttctttctatc 574 | |||||| ||||||||| ||| ||| |||||||||| |||||| Sbjct: 311 attggaatcctatatctttctta-ttcttcttccttctatctatc 268
>gb|AY847077.1| Stipagrostis zeyheri ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1146 Score = 351 bits (177), Expect = 2e-93 Identities = 346/402 (86%), Gaps = 12/402 (2%) Strand = Plus / Minus Query: 183 cttatttgttaatttataaacttaccaaataagacaannnnnnnggtttgttccgccatc 242 ||||||||||||||||||| || ||||||||| ||| |||||||||||||||| Sbjct: 669 cttatttgttaatttataatct-accaaataaagcaatttttttggtttgttccgccatc 611 Query: 243 ccacccaatgaagtgttaggattcttttcaataaaa--tcctatggaatcataggttctg 300 |||||||||||||| |||||||||||||||| |||| ||||||| | ||||||||| || Sbjct: 610 ccacccaatgaagtattaggattcttttcaaaaaaaaatcctatgcagtcataggttttg 551 Query: 301 tcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaa 360 |||||||||| |||||||||| ||||||||||| ||||||| |||| ||||||||||||| Sbjct: 550 tcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatggagcttccaaaa 491 Query: 361 aatttctttccgagttaattttctcagttttattaacccgggcggctctttattattgct 420 ||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||| Sbjct: 490 aatttctttccgagtcaattttctcagttttattaacccgagctgctctttattattgct 431 Query: 421 taaaatttgtagttcttctttcaagttacaatttttcattctctattagttt-------- 472 | |||||| || || || |||||||||| ||||| ||||| | ||| ||| Sbjct: 430 ttaaatttttattttttgtttcaagttatgattttgaattctttcttatttttaatattt 371 Query: 473 tattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagt 532 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | | Sbjct: 370 tattatattgatgctttatcacattgccttttatgatgtaattcatagaccatacatatt 311 Query: 533 ggaattctatatcttatttatttcctcttccttctttctatc 574 ||||| ||||||| | ||| ||| |||||||||| |||||| Sbjct: 310 ggaatcctatatccttctta-ttcttcttccttctatctatc 270 Score = 69.9 bits (35), Expect = 9e-09 Identities = 41/43 (95%) Strand = Plus / Minus Query: 106 tttttactcttattgaatcgcggtaaagtattctaattcaata 148 |||||||||||||||||||| |||||||||||||||| ||||| Sbjct: 712 tttttactcttattgaatcgtggtaaagtattctaatccaata 670
>gb|AF133477.1|AF133477 Zea mays ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1190 Score = 351 bits (177), Expect = 2e-93 Identities = 275/309 (88%), Gaps = 2/309 (0%) Strand = Plus / Minus Query: 106 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 165 |||||| ||||||||||||| |||||||||||||||| ||||||| |||||||||||||| Sbjct: 743 tttttattcttattgaatcgtggtaaagtattctaatccaataaggatttcgcgggcgaa 684 Query: 166 tatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnn 225 ||||||||||||||||||||||||||||||||| || | || ||||||| ||| Sbjct: 683 tatttactctttcctgtcttatttgttaatttagaatcctatcaaataaagcaatttttt 624 Query: 226 nggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 623 tggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 564 Query: 286 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 345 | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| ||| Sbjct: 563 tagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgca 504 Query: 346 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 405 | ||||||||| || ||| ||||||||| ||||||||||||||||||||||||| | Sbjct: 503 atggagcttcc--aatttttttttccgagtcaattttctcagttttattaacccggctga 446 Query: 406 ctctttatt 414 ||||||||| Sbjct: 445 ctctttatt 437 Score = 103 bits (52), Expect = 6e-19 Identities = 96/109 (88%), Gaps = 5/109 (4%) Strand = Plus / Minus Query: 470 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 525 |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 365 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcatagaccat 306 Query: 526 acacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||| | |||||| ||||||||| ||| ||| |||||||||| |||||| Sbjct: 305 acatattggaatcctatatctttctta-ttcttcttccttctatctatc 258
>gb|U62791.1|CJU62791 Chusquea juergensii ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1059 Score = 351 bits (177), Expect = 2e-93 Identities = 263/293 (89%), Gaps = 7/293 (2%) Strand = Plus / Minus Query: 152 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 206 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 700 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 641 Query: 207 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 266 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 640 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 581 Query: 267 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 326 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 580 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 521 Query: 327 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagt--taattttct 384 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||| Sbjct: 520 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaaaattttct 461 Query: 385 cagttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 437 ||||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 460 cagttttattaacccgggccgctctttattattgcttcaaatttttatttctt 408 Score = 111 bits (56), Expect = 3e-21 Identities = 106/121 (87%), Gaps = 5/121 (4%) Strand = Plus / Minus Query: 458 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 517 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 398 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 339 Query: 518 tagaccatacacag----tggaattctatatcttatttatttcctcttccttctttctat 573 ||||||||||| | |||||| ||||||||| ||||| ||||||| |||||||||| Sbjct: 338 tagaccatacatacatattggaatcctatatctttcttatt-cctcttctttctttctat 280 Query: 574 c 574 | Sbjct: 279 c 279 Score = 58.0 bits (29), Expect = 3e-05 Identities = 92/111 (82%), Gaps = 8/111 (7%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||| || ||||||||||| || Sbjct: 811 atctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttatag---at 756 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatc 124 |||||| || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 755 aatgtaatctttcttaaaaaaaaatctccttatttttactcttattgaatc 705
>gb|U54756.1|CPU54756 Chusquea pinifolia ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1038 Score = 351 bits (177), Expect = 2e-93 Identities = 263/293 (89%), Gaps = 7/293 (2%) Strand = Plus / Minus Query: 152 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 206 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 700 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 641 Query: 207 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 266 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 640 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 581 Query: 267 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 326 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 580 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 521 Query: 327 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagt--taattttct 384 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||| Sbjct: 520 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaaaattttct 461 Query: 385 cagttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 437 ||||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 460 cagttttattaacccgggccgctctttattattgcttcaaatttttatttctt 408 Score = 111 bits (56), Expect = 3e-21 Identities = 106/121 (87%), Gaps = 5/121 (4%) Strand = Plus / Minus Query: 458 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 517 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 398 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 339 Query: 518 tagaccatacacag----tggaattctatatcttatttatttcctcttccttctttctat 573 ||||||||||| | |||||| ||||||||| ||||| ||||||| |||||||||| Sbjct: 338 tagaccatacatacatattggaatcctatatctttcttatt-cctcttctttctttctat 280 Query: 574 c 574 | Sbjct: 279 c 279 Score = 58.0 bits (29), Expect = 3e-05 Identities = 92/111 (82%), Gaps = 8/111 (7%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||| || ||||||||||| || Sbjct: 811 atctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttatag---at 756 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatc 124 |||||| || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 755 aatgtaatctttcttaaaaaaaaatctccttatttttactcttattgaatc 705
>gb|AY847083.1| Paspalum conjugatum ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1157 Score = 349 bits (176), Expect = 6e-93 Identities = 305/352 (86%), Gaps = 10/352 (2%) Strand = Plus / Minus Query: 103 ttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggc 162 ||||||||| ||||||||||||| |||||||||| |||| ||||||||||| Sbjct: 733 ttatttttattcttattgaatcgtggtaaagtat----------taaggatttcgcgggc 684 Query: 163 gaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannn 222 |||||||||||||||||||||||||||||||||||| || |||| ||||||| ||| Sbjct: 683 gaatatttactctttcctgtcttatttgttaatttagaaccttatcaaataaagcaattt 624 Query: 223 nnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcct 282 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 623 ttttggtttgctccgccatcccacccaatgaagtgttaggattcttttcaataaaatcct 564 Query: 283 atggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatccc 342 ||| | ||||||||| |||||||||||| |||||||||| ||||| ||||| ||||||| Sbjct: 563 atgcagtcataggttttgtcgttcccacagcttctcctttaatggctaggtttgaatcct 504 Query: 343 gcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccggg 402 |||| |||||||| |||||||| |||||||||| |||||||||||||||||||||||||| Sbjct: 503 gcaatggagcttcaaaaaaattgctttccgagtcaattttctcagttttattaacccggg 444 Query: 403 cggctctttattattgcttaaaatttgtagttcttctttcaagttacaattt 454 | ||||||| ||||||||| ||||| || || || ||||||||||| |||| Sbjct: 443 ctgctcttttttattgctttcaatttttatttgttgtttcaagttacgattt 392 Score = 107 bits (54), Expect = 4e-20 Identities = 74/80 (92%), Gaps = 3/80 (3%) Strand = Plus / Minus Query: 470 ttttattatattgatgctttttcacattgcctttt---atgatgtaattcatagaccata 526 |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 370 ttttattatattgatgctttatcacattgcctttttttatgatgtaattcatagaccata 311 Query: 527 cacagtggaattctatatct 546 |||| |||||| |||||||| Sbjct: 310 cacattggaatcctatatct 291
>gb|AY847078.1| Eragrostis curvula ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1163 Score = 349 bits (176), Expect = 6e-93 Identities = 295/337 (87%), Gaps = 10/337 (2%) Strand = Plus / Minus Query: 96 aatatccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaattt 155 ||||||||||||||||| ||||||||||| ||||||||||| ||| ||||||| |||| Sbjct: 755 aatatccttatttttacccttattgaatcatagtaaagtattcgaatccaataaggattt 696 Query: 156 cgcgggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataag 215 ||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||| Sbjct: 695 cgcgggcgaatatttactctttcttgtcttatttgttaatttataaccttaacaaataaa 636 Query: 216 acaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaata 275 ||| |||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 635 gcaatttttttggtttgttccgccatcccacccaatgaagtattaggattcttttcaata 576 Query: 276 ----aaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatggttag 331 |||||||||| | |||||| || |||||||||||| |||||||||| ||||||||| Sbjct: 575 aaataaatcctatgcagtcatagcttttgtcgttcccacagcttctcctttaatggttag 516 Query: 332 gtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctcagtttt 391 || ||||||| |||| |||||||||||| ||||||||||||||| |||||||||| Sbjct: 515 gtttgaatcctgcaatggagcttccaaa------ctttccgagttaattctctcagtttt 462 Query: 392 attaacccgggcggctctttattattgcttaaaattt 428 |||||||||||| ||||||||||||||||| |||||| Sbjct: 461 attaacccgggctgctctttattattgctttaaattt 425 Score = 129 bits (65), Expect = 1e-26 Identities = 96/105 (91%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 470 ttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacac 529 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 374 ttttattatattgatgctttatcacattgccttttatgatgtaattcatagaccatacac 315 Query: 530 agtggaattctatatcttatttatttcctcttccttctttctatc 574 | |||||| |||||||| ||| ||| |||||||||| |||||| Sbjct: 314 attggaatcttatatctttctta-ttcttcttccttctatctatc 271
>gb|AF133480.1|AF133480 Zoysia matrella ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1204 Score = 347 bits (175), Expect = 2e-92 Identities = 296/337 (87%), Gaps = 5/337 (1%) Strand = Plus / Minus Query: 96 aatatccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaattt 155 |||||||||||||| |||| || || ||| ||||| ||||||||| |||||| |||| Sbjct: 786 aatatccttattttgactccta-tggatcatagtaaactattctaatccaataaagattt 728 Query: 156 cgcgggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataag 215 ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 727 cgcgggcgaatatttactctttcttgtcttatttgttaatttataaccttaccaaataaa 668 Query: 216 acaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaata 275 ||| |||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 667 gcaatttttttggtttgttccgccatcccacccaatgaagtattaggattcttttcaata 608 Query: 276 a----aatcctatggaatcataggttctgtcgttcccactgcttctccttgaatggttag 331 | ||||||||| | ||||||||| |||||||||||| |||||||||| ||||||||| Sbjct: 607 aaatcaatcctatgcagtcataggttttgtcgttcccacagcttctcctttaatggttag 548 Query: 332 gtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctcagtttt 391 || ||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 547 gtttgaatcctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagtttt 488 Query: 392 attaacccgggcggctctttattattgcttaaaattt 428 |||||| ||||| ||||||| ||||| ||| |||||| Sbjct: 487 attaacgcgggctgctcttttttatttctttaaattt 451 Score = 99.6 bits (50), Expect = 1e-17 Identities = 72/78 (92%), Gaps = 1/78 (1%) Strand = Plus / Minus Query: 470 ttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacac 529 |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct: 399 ttttattatattgatgctttatcacattgc-ttttatgatgtaattcatagaccatacat 341 Query: 530 agtggaattctatatctt 547 | |||||| |||||||| Sbjct: 340 attggaatcttatatctt 323
>gb|AY847105.1| Zeugites americanus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 944 Score = 343 bits (173), Expect = 4e-91 Identities = 324/375 (86%), Gaps = 5/375 (1%) Strand = Plus / Minus Query: 137 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 196 |||||| |||||| ||||||||||||||| |||||||||||||| ||||||||||| || Sbjct: 592 tctaatccaataaagatttcgcgggcgaatgtttactctttcctgccttatttgtta-tt 534 Query: 197 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 256 ||||| |||||||||||| | | |||||||||||||||||||||||||||||| Sbjct: 533 tataaccttaccaaataaagccatttttttggtttgttccgccatcccacccaatgaagt 474 Query: 257 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 316 |||||||||||||| |||||||||||| | ||||||||| | |||||||||| ||||| Sbjct: 473 attaggattcttttccataaaatcctatccagtcataggttttttcgttcccacagcttc 414 Query: 317 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 376 ||||| ||||||||||| ||||||| |||| ||||||||||||||||||||||||| || Sbjct: 413 tcctttaatggttaggtttgaatcctgcaatggagcttccaaaaaatttctttccgggtc 354 Query: 377 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 436 ||||||||||||||||||||| ||||| ||||||| ||||||||| |||||| || || | Sbjct: 353 aattttctcagttttattaactcgggctgctcttttttattgctttaaatttttatttat 294 Query: 437 tctttcaagttacaatttttcattctctattagtt----ttattatattgatgctttttc 492 | ||||||||||| |||| ||||||| || || |||||||||||||||||| || Sbjct: 293 tgtttcaagttacgatttcgaattctctctttttttttcttattatattgatgctttatc 234 Query: 493 acattgccttttatg 507 ||||||||||||||| Sbjct: 233 acattgccttttatg 219
>gb|U62783.1|CSU62783 Chusquea sp. B ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 343 bits (173), Expect = 4e-91 Identities = 253/282 (89%), Gaps = 5/282 (1%) Strand = Plus / Minus Query: 152 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 206 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 694 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 635 Query: 207 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 266 ||||||||| | | |||||||||||||||||||||||||||||| ||||||||| Sbjct: 634 ccaaataaggccatttttttggtttgttccgccatcccacccaatgaagtattaggattc 575 Query: 267 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 326 ||||||| ||||||||||| | ||||||||||||||||||||| | ||||||||| |||| Sbjct: 574 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccattacttctcctttaatg 515 Query: 327 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 386 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 514 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 455 Query: 387 gttttattaacccgggcggctctttattattgcttaaaattt 428 ||||||||||||||||| |||||||||||| |||| |||||| Sbjct: 454 gttttattaacccgggccgctctttattatggcttcaaattt 413 Score = 129 bits (65), Expect = 1e-26 Identities = 105/117 (89%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 458 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 517 ||||||| ||| ||||||||||| |||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatatggatgctttatcacattgccttttatgatgtaactca 335 Query: 518 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||||||||| | |||||| ||||||||| ||| ||||||||| ||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttctta-ttcctcttctttctttctatc 279 Score = 69.9 bits (35), Expect = 9e-09 Identities = 93/110 (84%), Gaps = 7/110 (6%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||| || |||||||||||||||| Sbjct: 804 atctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttatagataat 746 Query: 78 aatgtagtccttct---aaaaaatatccttatttttactcttattgaatc 124 ||| || |||| ||||||||||||||||||||||||||||||||| Sbjct: 745 ---gtaatctttcttaaaaaaaatatccttatttttactcttattgaatc 699
>gb|U54755.1|CWU54755 Chusquea windischii ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1034 Score = 343 bits (173), Expect = 4e-91 Identities = 262/293 (89%), Gaps = 7/293 (2%) Strand = Plus / Minus Query: 152 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 206 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 696 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 637 Query: 207 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 266 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 636 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 577 Query: 267 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 326 ||||||| ||||||||| | | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 576 ttttcaaaaaaatcctaggcagtcataggttctgtcgttcccactacttctcctttaatg 517 Query: 327 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagt--taattttct 384 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||| Sbjct: 516 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaaaattttct 457 Query: 385 cagttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 437 ||||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 456 cagttttattaacccgggccgctctttattattgcttcaaatttttatttctt 404 Score = 137 bits (69), Expect = 4e-29 Identities = 106/117 (90%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 458 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 517 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 518 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||||||||| | |||||| ||||||||| ||| ||||||||| ||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttctta-ttcctcttctttctttctatc 279 Score = 58.0 bits (29), Expect = 3e-05 Identities = 92/111 (82%), Gaps = 8/111 (7%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||| || ||||||||||| || Sbjct: 807 atctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttatag---at 752 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatc 124 |||||| || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 751 aatgtaatctttcttaaaaaaaaatctccttatttttactcttattgaatc 701
>gb|AY847103.1| Pohlidium petiolatum rpl16 gene, intron; chloroplast Length = 1018 Score = 339 bits (171), Expect = 6e-90 Identities = 260/292 (89%) Strand = Plus / Minus Query: 137 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 196 |||||| |||||| ||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 663 tctaatccaataaagatttcgcgggcgaatgtttaccctttcctgtcttatttgttaatt 604 Query: 197 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 256 ||||| |||||||||||| | | |||||||||||||||||||||||||||||| Sbjct: 603 tataaccttaccaaataaagccatttttttggtttgttccgccatcccacccaatgaagt 544 Query: 257 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 316 |||||||||||||||| |||||||||| | ||||||||| |||||||||||| ||||| Sbjct: 543 attaggattcttttcaaaaaaatcctatccagtcataggttttgtcgttcccacagcttc 484 Query: 317 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 376 ||||| ||||||||||| ||||||| |||| |||||||||||||||||||||||||||| Sbjct: 483 tcctttaatggttaggtttgaatcctgcaatggagcttccaaaaaatttctttccgagtc 424 Query: 377 aattttctcagttttattaacccgggcggctctttattattgcttaaaattt 428 |||||||||||||||||||||| |||| ||||||| ||||||||| |||||| Sbjct: 423 aattttctcagttttattaaccggggctgctcttttttattgcttgaaattt 372 Score = 115 bits (58), Expect = 2e-22 Identities = 70/74 (94%) Strand = Plus / Minus Query: 474 attatattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtg 533 |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| || Sbjct: 320 attatattgatgctttatcacattgccttttatgacgtaattcatagaccatacacattg 261 Query: 534 gaattctatatctt 547 |||| ||||||||| Sbjct: 260 gaatcctatatctt 247
>gb|AY847094.1| Centotheca lappacea ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 815 Score = 335 bits (169), Expect = 9e-89 Identities = 307/355 (86%), Gaps = 9/355 (2%) Strand = Plus / Minus Query: 100 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 159 |||||||||||| ||||||||||||| | |||||||||||||| || |||||| Sbjct: 397 tccttatttttattcttattgaatcgtg-taaagtattctaatcca--------ttcgcg 347 Query: 160 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 219 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 346 ggcgaatatttactctttcctgtcttatttgttaatttataaccttaccaaataaagcaa 287 Query: 220 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 279 |||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 286 tttttttggtttgttccgccatcccgcccaatgaagtattaggattcttttcaataaaat 227 Query: 280 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 339 |||||| | ||||| ||| |||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 226 cctatgcagtcataagttttgtcgttcccacagcttctcctttaatggttaggtttgaat 167 Query: 340 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 399 || |||| |||||||||||||||||| ||||||| | ||||||||||||||||||||||| Sbjct: 166 cctgcaatggagcttccaaaaaatttatttccgaatcaattttctcagttttattaaccc 107 Query: 400 gggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaattt 454 ||| ||||||| ||| |||| |||||| || || || ||| ||||||| |||| Sbjct: 106 cggctgctcttttttaccgctttaaatttttatttattgtttgaagttacgattt 52
>gb|AY847106.1| Zeugites capillaris ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1062 Score = 333 bits (168), Expect = 4e-88 Identities = 288/329 (87%), Gaps = 8/329 (2%) Strand = Plus / Minus Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 623 ggtttgttccgccatcccacccaatgaagtattaggatttttttcaataaaatcctatcc 564 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||| |||||||||||| |||||||||| |||||||||| ||||||| |||| Sbjct: 563 agtcataggttttgtcgttcccacagcttctcctttaatggttaggcttgaatcctgcaa 504 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 503 tggagcttccaaaaaatttctttccgagtcaattttctcagttttattaacccgggctgc 444 Query: 407 tctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcattctctat 466 ||||| ||||||||| ||||| || || || |||||||| || |||| ||||||| | Sbjct: 443 tcttttttattgcttgcaatttttatttattgtttcaagtgacgatttcgaattctctct 384 Query: 467 tagttttattat--------attgatgctttttcacattgccttttatgatgtaattcat 518 | |||| |||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 383 tttttttcttattttattatattgatgctttatcacattgccttttatgatgtaattcat 324 Query: 519 agaccatacacagtggaattctatatctt 547 |||||||||||| |||||| ||||||||| Sbjct: 323 agaccatacacattggaatcctatatctt 295 Score = 101 bits (51), Expect = 2e-18 Identities = 60/63 (95%) Strand = Plus / Minus Query: 152 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaa 211 ||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 696 atttcgcgggcgaatgtttactctttcctgtcttatttggtaatttataaccttaccaaa 637 Query: 212 taa 214 ||| Sbjct: 636 taa 634
>gb|AF133491.1|AF133491 Joinvillea ascendens ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1229 Score = 327 bits (165), Expect = 2e-86 Identities = 281/319 (88%), Gaps = 6/319 (1%) Strand = Plus / Minus Query: 106 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 165 ||||||||||||| ||||||||| ||| |||| |||| |||||| |||||||||||||| Sbjct: 757 tttttactcttatcgaatcgcggcaaaatattgtaatccaataaagatttcgcgggcgaa 698 Query: 166 tatttactctttcctgtcttatttg----ttaatttataaacttaccaaataagacaann 221 ||||||||||||||||||||||| | | |||| |||| ||||||||||||||||| Sbjct: 697 tatttactctttcctgtcttattcgaggttcaattcataaccttaccaaataagacaatt 638 Query: 222 nnnnnggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatc 280 |||||||||||||||||||||||||||| | ||||||||| ||||||||| |||| Sbjct: 637 ttcttggtttgttccgccatcccacccaatgaattcttaggattcgttttcaatagaatc 578 Query: 281 ctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatc 340 ||||| | |||||||||||||||||||||| |||||||| | |||||||||||||||| | Sbjct: 577 ctatgcagtcataggttctgtcgttcccacagcttctccattaatggttaggtctgaacc 518 Query: 341 ccgcaacggagcttcc-aaaaaatttctttccgagttaattttctcagttttattaaccc 399 |||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 517 ccgcaatggagcttccaaaaaaatttctttccgagtcaattttctcagttttattaaccc 458 Query: 400 gggcggctctttattattg 418 || |||||||||||||| Sbjct: 457 agggtgctctttattattg 439 Score = 109 bits (55), Expect = 1e-20 Identities = 70/75 (93%) Strand = Plus / Minus Query: 473 tattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagt 532 ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| | | Sbjct: 385 tattatattgatgctttctcacactgccttttatgatgtaattcatagaccatacatatt 326 Query: 533 ggaattctatatctt 547 ||||| ||||||||| Sbjct: 325 ggaatcctatatctt 311
>ref|XM_506652.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1001_G09.24 mRNA Length = 1742 Score = 323 bits (163), Expect = 4e-85 Identities = 307/352 (87%), Gaps = 6/352 (1%) Strand = Plus / Minus Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 371 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 312 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | |||||||||||||||||||||| |||||||||| ||||||||||| | |||| | ||| Sbjct: 311 agtcataggttctgtcgttcccacggcttctcctttaatggttaggttttaatctcacaa 252 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||| ||| || |||||||||||||||||| |||| | Sbjct: 251 tggagcttccaaaaaatttctttccaagtcaa-tttctcagttttattaactcgggacac 193 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 192 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 133 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 | ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 132 ttgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 73 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 72 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 22 Score = 165 bits (83), Expect = 2e-37 Identities = 86/87 (98%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 478 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 419 Query: 167 atttactctttcctgtcttatttgtta 193 ||||||||||||||||||||||||||| Sbjct: 418 atttactctttcctgtcttatttgtta 392 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 578 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 520 Query: 61 ctatattta 69 ||||||||| Sbjct: 519 ctatattta 511
>gb|AY912198.1| Guadua angustifolia ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1079 Score = 323 bits (163), Expect = 4e-85 Identities = 240/268 (89%), Gaps = 5/268 (1%) Strand = Plus / Minus Query: 180 tgtcttatttgttaatttata-----aacttaccaaataagacaannnnnnnggtttgtt 234 ||||||||||||||||||||| | ||||||||||||| ||| |||||||| Sbjct: 559 tgtcttatttgttaatttatattagaaccttaccaaataaggcaatttttttggtttgtt 500 Query: 235 ccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcatag 294 |||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||| Sbjct: 499 ccgccatcccacccaatgaagtattaggattcttttcaataaaatcctatgcagtcatag 440 Query: 295 gttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagctt 354 ||||||||||||||||| ||||||||| ||||||||||||||||| || ||| ||||||| Sbjct: 439 gttctgtcgttcccactacttctcctttaatggttaggtctgaattccacaatggagctt 380 Query: 355 ccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctttatt 414 ||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||| Sbjct: 379 ccaaaaaatttctttccaagtcaattttctcagttttattaacccgggccgctctttatt 320 Query: 415 attgcttaaaatttgtagttcttctttc 442 ||||||| ||||||||| ||||| |||| Sbjct: 319 attgcttcaaatttgtatttcttgtttc 292 Score = 127 bits (64), Expect = 4e-26 Identities = 119/136 (87%), Gaps = 10/136 (7%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||||| || ||||||||||||||||| Sbjct: 693 atctagaatatatctag-atgtgtgtgtctatttatctatattctatatttatagataat 635 Query: 78 aatgtagtccttct------aaaaaatatccttatttttactcttattgaatcgcggtaa 131 ||| ||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 634 ---gtaatccttcttaaaaaaaaaaatctccttatttttactcttattgaatcgcggtaa 578 Query: 132 agtattctaattcaat 147 |||||||||||||||| Sbjct: 577 agtattctaattcaat 562 Score = 93.7 bits (47), Expect = 6e-16 Identities = 82/91 (90%), Gaps = 2/91 (2%) Strand = Plus / Minus Query: 484 tgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaattctata 543 |||||| |||||| ||||||||||||||||||||||||||||||| | |||||| ||||| Sbjct: 244 tgctttatcacat-gccttttatgatgtaattcatagaccatacatattggaatcctata 186 Query: 544 tcttatttatttcctcttccttctttctatc 574 |||| ||| ||||||||| ||||||||||| Sbjct: 185 tctttctta-ttcctcttctttctttctatc 156
>gb|AF133478.1|AF133478 Sorghum bicolor ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1200 Score = 323 bits (163), Expect = 4e-85 Identities = 258/293 (88%), Gaps = 8/293 (2%) Strand = Plus / Minus Query: 106 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 165 |||||| ||||||||||||| ||||||||||||||| | |||||||||||||| Sbjct: 762 tttttattcttattgaatcgtggtaaagtattctaa--------ggatttcgcgggcgaa 711 Query: 166 tatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnn 225 ||||||||||||||||||||||||||||||||| || |||| ||||||| ||| Sbjct: 710 tatttactctttcctgtcttatttgttaatttagaaccttatcaaataaagcaaattttt 651 Query: 226 nggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 285 ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 650 tggtttgttccgccatcccacccaatgaagagttaggattctttccaataaaatcctatg 591 Query: 286 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 345 | ||||||| | |||||||||||| |||||||||| ||||||||||| ||||||| ||| Sbjct: 590 tagtcataggctttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgca 531 Query: 346 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacc 398 | |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 530 atggagcttccaaaaaatttctttccgagtcaattttctcagttttattaacc 478 Score = 107 bits (54), Expect = 4e-20 Identities = 96/108 (88%), Gaps = 4/108 (3%) Strand = Plus / Minus Query: 470 ttttattatattgatgctttttcacattgcctttt---atgatgtaattcatagaccata 526 |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 395 ttttattatattgatgctttatcacattgcctttttttatgatgtaattcatagaccata 336 Query: 527 cacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||| ||||| ||||||||| ||| ||| |||||||||| |||||| Sbjct: 335 cacatgggaatcctatatctttctta-ttcttcttccttctatctatc 289
>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1001_G09 Length = 118018 Score = 323 bits (163), Expect = 4e-85 Identities = 307/352 (87%), Gaps = 6/352 (1%) Strand = Plus / Minus Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 76818 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 76759 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | |||||||||||||||||||||| |||||||||| ||||||||||| | |||| | ||| Sbjct: 76758 agtcataggttctgtcgttcccacggcttctcctttaatggttaggttttaatctcacaa 76699 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||| ||| || |||||||||||||||||| |||| | Sbjct: 76698 tggagcttccaaaaaatttctttccaagtcaa-tttctcagttttattaactcgggacac 76640 Query: 407 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 462 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 76639 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 76580 Query: 463 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 522 | ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 76579 ttgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 76520 Query: 523 catacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 |||||| | |||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 76519 catacatattggaatcctatatctttcttattt-ctcttccttctttctatc 76469 Score = 165 bits (83), Expect = 2e-37 Identities = 86/87 (98%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 76925 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 76866 Query: 167 atttactctttcctgtcttatttgtta 193 ||||||||||||||||||||||||||| Sbjct: 76865 atttactctttcctgtcttatttgtta 76839 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 77025 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 76967 Query: 61 ctatattta 69 ||||||||| Sbjct: 76966 ctatattta 76958
>gb|U62792.1|CNU62792 Chusquea nudiramea ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1034 Score = 319 bits (161), Expect = 6e-84 Identities = 259/293 (88%), Gaps = 7/293 (2%) Strand = Plus / Minus Query: 152 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 206 ||||||||||||||| | ||||||| ||||||||| |||| |||||||| | |||| Sbjct: 696 atttcgcgggcgaatgtatactcttgcctgtcttaattgtcaatttatattataacctta 637 Query: 207 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 266 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 636 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 577 Query: 267 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 326 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 576 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 517 Query: 327 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagt--taattttct 384 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||| Sbjct: 516 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaaaattttct 457 Query: 385 cagttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 437 ||||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 456 cagttttattaacccgggccgctctttattattgcttcaaatttttatttctt 404 Score = 137 bits (69), Expect = 4e-29 Identities = 106/117 (90%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 458 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 517 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 518 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||||||||| | |||||| ||||||||| ||| ||||||||| ||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttctta-ttcctcttctttctttctatc 279 Score = 58.0 bits (29), Expect = 3e-05 Identities = 92/111 (82%), Gaps = 8/111 (7%) Strand = Plus / Minus Query: 18 atctagaatatatccagnatgtgtgtggatatttatctaaatnctatatttatagataat 77 |||||||||||||| || ||||||||| |||||||| || ||||||||||| || Sbjct: 807 atctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttatag---at 752 Query: 78 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatc 124 |||||| || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 751 aatgtaatctttcttaaaaaaaaatctccttatttttactcttattgaatc 701
>gb|AY847101.1| Orthoclada laxa ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1068 Score = 301 bits (152), Expect = 1e-78 Identities = 278/322 (86%), Gaps = 4/322 (1%) Strand = Plus / Minus Query: 137 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 196 |||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 716 tctaatccaataaagatttcgcgggcgaatgtttactctttcctgtcttatttgttaatt 657 Query: 197 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 256 ||||| |||||||||||| | | |||||||||||||||||||||||||||| | Sbjct: 656 tataaccttaccaaataaagccatttttttggtttgttccgccatcccacccaatgaaat 597 Query: 257 gttaggattcttttcaataaaat----cctatggaatcataggttctgtcgttcccactg 312 |||||||||||||||||||||| ||||| | ||||||||| |||||||||||| | Sbjct: 596 attaggattcttttcaataaaataaatcctatccagtcataggttttgtcgttcccacag 537 Query: 313 cttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccg 372 ||||||||| |||||||||| ||||| | |||| ||||||||||||||||||||||||| Sbjct: 536 cttctcctttaatggttaggattgaattctgcaatggagcttccaaaaaatttctttccg 477 Query: 373 agttaattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtag 432 || |||||||||||||||||||||||||| ||||||| ||||||||| ||||||| | Sbjct: 476 agcccattttctcagttttattaacccgggctgctcttttttattgctttaaatttggat 417 Query: 433 ttcttctttcaagttacaattt 454 || || ||||||| ||| |||| Sbjct: 416 ttattgtttcaaggtacgattt 395 Score = 101 bits (51), Expect = 2e-18 Identities = 60/63 (95%) Strand = Plus / Minus Query: 485 gctttttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatat 544 |||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||| Sbjct: 357 gctttttcacattgccttttatgatgtaattcatagcccatacacattggaatcctatat 298 Query: 545 ctt 547 ||| Sbjct: 297 ctt 295
>gb|AY847111.1| Zeugites sagittatus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1018 Score = 281 bits (142), Expect = 1e-72 Identities = 214/238 (89%) Strand = Plus / Minus Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 570 ggtttgttccgccatcccccccaatgaagtattaggattcttttcaataaaatcctatcc 511 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| Sbjct: 510 agtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaa 451 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 450 tggagcttccaaaaaatttctttccgagtcaattttctcagttttattaacccgggctgc 391 Query: 407 tctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcattctct 464 ||||| ||||||||| ||||| | || || ||||||||||| |||| | ||||||| Sbjct: 390 tcttttttattgcttgcaatttttttttattgtttcaagttacgatttctaattctct 333 Score = 137 bits (69), Expect = 4e-29 Identities = 81/85 (95%) Strand = Plus / Minus Query: 470 ttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacac 529 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 318 ttttattatattgatgctttatcacattgccttttatgatgtaattcatagaccatacac 259 Query: 530 agtggaattctatatcttatttatt 554 | |||||| ||||||||| |||||| Sbjct: 258 attggaatcctatatcttttttatt 234 Score = 107 bits (54), Expect = 4e-20 Identities = 72/78 (92%) Strand = Plus / Minus Query: 137 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 196 |||||| |||||| ||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 659 tctaatccaataaagatttcgcgggcgaatgtttactctttcctgtcttatttggtaatt 600 Query: 197 tataaacttaccaaataa 214 ||||| |||||||||||| Sbjct: 599 tataaccttaccaaataa 582
>gb|AY847102.1| Lophatherum gracile ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1078 Score = 281 bits (142), Expect = 1e-72 Identities = 214/238 (89%) Strand = Plus / Minus Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 630 ggtttgttccgccatcccccccaatgaagtattaggattcttttcaataaaatcctatcc 571 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| Sbjct: 570 agtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaa 511 Query: 347 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 406 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 510 tggagcttccaaaaaatttctttccgagtcaattttctcagttttattaacccgggctgc 451 Query: 407 tctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcattctct 464 ||||| ||||||||| ||||| | || || ||||||||||| |||| | ||||||| Sbjct: 450 tcttttttattgcttgcaatttttttttattgtttcaagttacgatttctaattctct 393 Score = 137 bits (69), Expect = 4e-29 Identities = 81/85 (95%) Strand = Plus / Minus Query: 470 ttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacac 529 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 378 ttttattatattgatgctttatcacattgccttttatgatgtaattcatagaccatacac 319 Query: 530 agtggaattctatatcttatttatt 554 | |||||| ||||||||| |||||| Sbjct: 318 attggaatcctatatcttttttatt 294 Score = 107 bits (54), Expect = 4e-20 Identities = 72/78 (92%) Strand = Plus / Minus Query: 137 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 196 |||||| |||||| ||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 719 tctaatccaataaagatttcgcgggcgaatgtttactctttcctgtcttatttggtaatt 660 Query: 197 tataaacttaccaaataa 214 ||||| |||||||||||| Sbjct: 659 tataaccttaccaaataa 642
>gb|AY847113.1| Micraira lazaridis ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 757 Score = 278 bits (140), Expect = 2e-71 Identities = 214/238 (89%), Gaps = 2/238 (0%) Strand = Plus / Minus Query: 184 ttatttgttaatttataaacttaccaaataagacaannnnnnnggtttgttccgccatcc 243 |||||||||||||||||| |||||||||||| ||| ||||||||||||||||| Sbjct: 325 ttatttgttaatttataa-cttaccaaataaagcaatttttt-ggtttgttccgccatcc 268 Query: 244 cacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcg 303 ||||||||||||| |||||||||||||||||||||||||||| | ||||||||| ||||| Sbjct: 267 cacccaatgaagtattaggattcttttcaataaaatcctatgcagtcataggttttgtcg 208 Query: 304 ttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaat 363 ||||||| |||||||||| ||||||||||| ||||||| |||| |||||||||||||||| Sbjct: 207 ttcccacagcttctcctttaatggttaggtttgaatcctgcaatggagcttccaaaaaat 148 Query: 364 ttctttccgagttaattttctcagttttattaacccgggcggctctttattattgctt 421 || ||||||||| ||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 147 ttatttccgagtcaattttctcagttttattaacccgggctactctttattaatgctt 90 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 470 ttttattatattgatgctttttcacattgcctttta 505 ||||| |||||||||||||| ||||||||||||||| Sbjct: 36 ttttaatatattgatgctttatcacattgcctttta 1 Score = 52.0 bits (26), Expect = 0.002 Identities = 49/54 (90%), Gaps = 2/54 (3%) Strand = Plus / Minus Query: 96 aatatccttatttttactct-tattgaatcgcggtaaagtattctaattcaata 148 |||| ||||||||||||||| |||| ||||| |||||||||||||||| ||||| Sbjct: 378 aatacccttatttttactctatatt-aatcgtggtaaagtattctaatacaata 326
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 272 bits (137), Expect = 1e-69 Identities = 271/309 (87%), Gaps = 9/309 (2%) Strand = Plus / Plus Query: 106 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 165 |||||| ||||||||||||| |||||||||||||||| ||||||| |||||||||||||| Sbjct: 80231 tttttattcttattgaatcgtggtaaagtattctaatccaataaggatttcgcgggcgaa 80290 Query: 166 tatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnn 225 ||||||||||||||||||||||||||||||||| || |||| ||||||| ||| Sbjct: 80291 tatttactctttcctgtcttatttgttaatttagaaccttatcaaataaagcaattttgt 80350 Query: 226 nggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 285 ||||||| ||||||||| ||||||||||||||||||||||| ||||||| ||||||| Sbjct: 80351 -ggtttgt-ccgccatcca--ccaatgaagtgttaggattcttt-caataaa-tcctatg 80404 Query: 286 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 345 | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| ||| Sbjct: 80405 tagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgca 80464 Query: 346 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 405 | ||||||||| || ||| ||||||||| ||||||||||||||||||||||| ||| | Sbjct: 80465 atggagcttcc--aatttttttttccgagtcaattttctcagttttattaaccc-ggctg 80521 Query: 406 ctctttatt 414 ||||||||| Sbjct: 80522 ctctttatt 80530 Score = 79.8 bits (40), Expect = 9e-12 Identities = 94/109 (86%), Gaps = 6/109 (5%) Strand = Plus / Plus Query: 470 ttttattatattgatgctttttcacattgcc----ttttatgatgtaattcatagaccat 525 |||||||||||||||||||| |||||||||| |||||||||| |||||||||||||| Sbjct: 80600 ttttattatattgatgctttatcacattgccttttttttatgatg-aattcatagaccat 80658 Query: 526 acacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||| | ||||| ||||||||| ||| ||| |||||||||| |||||| Sbjct: 80659 acatatgggaatcctatatctttctta-ttcttcttccttctatctatc 80706
>gb|M15176.1|MZECPPG Zea mays chloroplast Eco x DNA Length = 1368 Score = 272 bits (137), Expect = 1e-69 Identities = 271/309 (87%), Gaps = 9/309 (2%) Strand = Plus / Minus Query: 106 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 165 |||||| ||||||||||||| |||||||||||||||| ||||||| |||||||||||||| Sbjct: 346 tttttattcttattgaatcgtggtaaagtattctaatccaataaggatttcgcgggcgaa 287 Query: 166 tatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnn 225 ||||||||||||||||||||||||||||||||| || |||| ||||||| ||| Sbjct: 286 tatttactctttcctgtcttatttgttaatttagaaccttatcaaataaagcaa-ttttg 228 Query: 226 nggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 285 |||||| |||||||||| |||||||||||||||||||| ||||||| |||||||||| Sbjct: 227 tggtttg-tccgccatcc--accaatgaagtgttaggattc-tttcaat-aaatcctatg 173 Query: 286 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 345 | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| ||| Sbjct: 172 tagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgca 113 Query: 346 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 405 | ||||||||| || ||| ||||||||| ||||||||||||||||||||||| ||| | Sbjct: 112 atggagcttcc--aatttttttttccgagtcaattttctcagttttattaaccc-ggctg 56 Query: 406 ctctttatt 414 ||||||||| Sbjct: 55 ctctttatt 47
>gb|AY847097.1| Chasmanthium curvifolium ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 982 Score = 270 bits (136), Expect = 5e-69 Identities = 210/237 (88%) Strand = Plus / Minus Query: 185 tatttgttaatttataaacttaccaaataagacaannnnnnnggtttgttccgccatccc 244 ||||||||||||||||| || ||||||||| ||| || ||||||||||||||| Sbjct: 660 tatttgttaatttataacctaaccaaataaagcaatttttttggcttgttccgccatccc 601 Query: 245 acccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgt 304 |||||||||||| |||||||||||||||||||||||||||| | ||||||||| | |||| Sbjct: 600 acccaatgaagtattaggattcttttcaataaaatcctatgcagtcataggttttctcgt 541 Query: 305 tcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatt 364 |||||| |||||||||| |||||||||| ||||||| |||| ||||||||||||||||| Sbjct: 540 tcccacagcttctcctttcatggttaggtttgaatcctgcaatggagcttccaaaaaatt 481 Query: 365 tctttccgagttaattttctcagttttattaacccgggcggctctttattattgctt 421 ||||||||||| ||||||||||||||||||||||| ||| ||||||| ||||||||| Sbjct: 480 tctttccgagtcaattttctcagttttattaacccaggctgctcttttttattgctt 424 Score = 137 bits (69), Expect = 4e-29 Identities = 97/105 (92%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 470 ttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacac 529 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 369 ttttattatattgatgctttatcacattgccttttatgatgtaattcatagaccatacac 310 Query: 530 agtggaattctatatcttatttatttcctcttccttctttctatc 574 | |||||| ||||||||| ||| ||| |||||||||| |||||| Sbjct: 309 attggaatcctatatctttctta-ttcttcttccttctatctatc 266
>dbj|AP007101.1| Saccharum spontaneum chloroplast gene for ribosomal protein L16, partial cds, strain: SES205A, clone: SSE-79kb Length = 671 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 231 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 290 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 291 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 350 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 351 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 410 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 411 ta-ttattgcttaaaatttgt 430 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 95.6 bits (48), Expect = 2e-16 Identities = 95/109 (87%), Gaps = 5/109 (4%) Strand = Plus / Plus Query: 470 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 525 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 260 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 319 Query: 526 acacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||| ||||| ||||||||| ||| ||| |||||||||| |||||| Sbjct: 320 acacatgggaatcctatatctttctta-ttcttcttccttctatctatc 367
>dbj|AP007100.1| Saccharum spontaneum chloroplast gene for ribosomal protein L16, partial cds, strain: Jw385, clone: SJw-79kb Length = 672 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 231 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 290 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 291 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 350 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 351 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 410 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 411 ta-ttattgcttaaaatttgt 430 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 95.6 bits (48), Expect = 2e-16 Identities = 95/109 (87%), Gaps = 5/109 (4%) Strand = Plus / Plus Query: 470 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 525 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 260 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 319 Query: 526 acacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||| ||||| ||||||||| ||| ||| |||||||||| |||||| Sbjct: 320 acacatgggaatcctatatctttctta-ttcttcttccttctatctatc 367
>dbj|AP007099.1| Saccharum spontaneum chloroplast gene for ribosomal protein L16, partial cds, strain: Glagah, clone: SGl-79kb Length = 671 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 231 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 290 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 291 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 350 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 351 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 410 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 411 ta-ttattgcttaaaatttgt 430 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 95.6 bits (48), Expect = 2e-16 Identities = 95/109 (87%), Gaps = 5/109 (4%) Strand = Plus / Plus Query: 470 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 525 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 260 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 319 Query: 526 acacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||| ||||| ||||||||| ||| ||| |||||||||| |||||| Sbjct: 320 acacatgggaatcctatatctttctta-ttcttcttccttctatctatc 367
>dbj|AP007098.1| Saccharum edule chloroplast gene for ribosomal protein L16, partial cds, strain: COL/PAPUA N.G/TARC/E12, clone: EPN-79kb Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 231 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 290 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 291 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 350 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 351 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 410 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 411 ta-ttattgcttaaaatttgt 430 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 95.6 bits (48), Expect = 2e-16 Identities = 95/109 (87%), Gaps = 5/109 (4%) Strand = Plus / Plus Query: 470 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 525 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 255 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 314 Query: 526 acacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||| ||||| ||||||||| ||| ||| |||||||||| |||||| Sbjct: 315 acacatgggaatcctatatctttctta-ttcttcttccttctatctatc 362
>dbj|AP007097.1| Saccharum edule chloroplast gene for ribosomal protein L16, partial cds, strain: IN95-009, clone: EIN-79kb Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 231 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 290 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 291 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 350 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 351 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 410 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 411 ta-ttattgcttaaaatttgt 430 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 95.6 bits (48), Expect = 2e-16 Identities = 95/109 (87%), Gaps = 5/109 (4%) Strand = Plus / Plus Query: 470 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 525 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 255 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 314 Query: 526 acacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||| ||||| ||||||||| ||| ||| |||||||||| |||||| Sbjct: 315 acacatgggaatcctatatctttctta-ttcttcttccttctatctatc 362
>dbj|AP007096.1| Saccharum sinense chloroplast gene for ribosomal protein L16, partial cds, strain: Ooshima, clone: SiO-79kb Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 231 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 290 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 291 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 350 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 351 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 410 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 411 ta-ttattgcttaaaatttgt 430 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 95.6 bits (48), Expect = 2e-16 Identities = 95/109 (87%), Gaps = 5/109 (4%) Strand = Plus / Plus Query: 470 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 525 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 255 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 314 Query: 526 acacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||| ||||| ||||||||| ||| ||| |||||||||| |||||| Sbjct: 315 acacatgggaatcctatatctttctta-ttcttcttccttctatctatc 362
>dbj|AP007095.1| Saccharum barberi chloroplast gene for ribosomal protein L16, partial cds, strain: Chunnee, clone: BCh-79kb Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 231 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 290 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 291 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 350 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 351 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 410 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 411 ta-ttattgcttaaaatttgt 430 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 95.6 bits (48), Expect = 2e-16 Identities = 95/109 (87%), Gaps = 5/109 (4%) Strand = Plus / Plus Query: 470 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 525 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 255 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 314 Query: 526 acacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||| ||||| ||||||||| ||| ||| |||||||||| |||||| Sbjct: 315 acacatgggaatcctatatctttctta-ttcttcttccttctatctatc 362
>dbj|AP007094.1| Saccharum sinense chloroplast gene for ribosomal protein L16, partial cds, strain: Tekcha, clone: SiTe-79kb Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 231 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 290 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 291 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 350 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 351 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 410 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 411 ta-ttattgcttaaaatttgt 430 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 95.6 bits (48), Expect = 2e-16 Identities = 95/109 (87%), Gaps = 5/109 (4%) Strand = Plus / Plus Query: 470 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 525 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 255 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 314 Query: 526 acacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||| ||||| ||||||||| ||| ||| |||||||||| |||||| Sbjct: 315 acacatgggaatcctatatctttctta-ttcttcttccttctatctatc 362
>dbj|AP007093.1| Saccharum barberi chloroplast gene for ribosomal protein L16, partial cds, strain: Kewali14, clone: BKe-79kb Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 231 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 290 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 291 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 350 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 351 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 410 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 411 ta-ttattgcttaaaatttgt 430 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 95.6 bits (48), Expect = 2e-16 Identities = 95/109 (87%), Gaps = 5/109 (4%) Strand = Plus / Plus Query: 470 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 525 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 255 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 314 Query: 526 acacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||| ||||| ||||||||| ||| ||| |||||||||| |||||| Sbjct: 315 acacatgggaatcctatatctttctta-ttcttcttccttctatctatc 362
>dbj|AP007092.1| Saccharum robustum chloroplast gene for ribosomal protein L16, exon 2, partial sequence Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 231 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 290 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 291 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 350 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 351 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 410 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 411 ta-ttattgcttaaaatttgt 430 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 95.6 bits (48), Expect = 2e-16 Identities = 95/109 (87%), Gaps = 5/109 (4%) Strand = Plus / Plus Query: 470 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 525 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 255 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 314 Query: 526 acacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||| ||||| ||||||||| ||| ||| |||||||||| |||||| Sbjct: 315 acacatgggaatcctatatctttctta-ttcttcttccttctatctatc 362
>dbj|AP007091.1| Saccharum robustum chloroplast gene for ribosomal protein L16, partial cds, strain: 6, clone: R6-79kb Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 231 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 290 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 291 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 350 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 351 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 410 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 411 ta-ttattgcttaaaatttgt 430 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 95.6 bits (48), Expect = 2e-16 Identities = 95/109 (87%), Gaps = 5/109 (4%) Strand = Plus / Plus Query: 470 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 525 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 255 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 314 Query: 526 acacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||| ||||| ||||||||| ||| ||| |||||||||| |||||| Sbjct: 315 acacatgggaatcctatatctttctta-ttcttcttccttctatctatc 362
>dbj|AP007090.1| Saccharum officinarum chloroplast gene for ribosomal protein L16, partial cds, strain: Fiji40, clone: OFi-79kb Length = 665 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 231 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 290 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 291 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 350 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 351 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 410 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 411 ta-ttattgcttaaaatttgt 430 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 95.6 bits (48), Expect = 2e-16 Identities = 95/109 (87%), Gaps = 5/109 (4%) Strand = Plus / Plus Query: 470 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 525 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 254 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 313 Query: 526 acacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||| ||||| ||||||||| ||| ||| |||||||||| |||||| Sbjct: 314 acacatgggaatcctatatctttctta-ttcttcttccttctatctatc 361
>dbj|AP007089.1| Saccharum officinarum chloroplast gene for ribosomal protein L16, partial cds, strain: Badila, clone: OBa-79kb Length = 665 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 231 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 290 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 291 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 350 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 351 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 410 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 411 ta-ttattgcttaaaatttgt 430 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 95.6 bits (48), Expect = 2e-16 Identities = 95/109 (87%), Gaps = 5/109 (4%) Strand = Plus / Plus Query: 470 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 525 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 254 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 313 Query: 526 acacagtggaattctatatcttatttatttcctcttccttctttctatc 574 ||||| ||||| ||||||||| ||| ||| |||||||||| |||||| Sbjct: 314 acacatgggaatcctatatctttctta-ttcttcttccttctatctatc 361
>ref|XM_450631.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2141 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Minus Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 286 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 156 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 97 Query: 287 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 346 | |||||||||||||||||||||| |||||||||| ||||||||||| | |||| | ||| Sbjct: 96 agtcataggttctgtcgttcccacggcttctcctttaatggttaggttttaatctcacaa 37 Query: 347 cggagcttccaaaaaatttctttccgagttaattt 381 |||||||||||||||||||||||| ||| ||||| Sbjct: 36 tggagcttccaaaaaatttctttccaagtcaattt 2 Score = 165 bits (83), Expect = 2e-37 Identities = 86/87 (98%) Strand = Plus / Minus Query: 107 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 166 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 263 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 204 Query: 167 atttactctttcctgtcttatttgtta 193 ||||||||||||||||||||||||||| Sbjct: 203 atttactctttcctgtcttatttgtta 177 Score = 46.1 bits (23), Expect = 0.13 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 1 tatagtcaaaaagnagcatctagaatatatccagnatgtgtgtggatatttatctaaatn 60 ||||||||| || || |||||||||||||| || |||||| || |||||||||| || Sbjct: 363 tatagtcaagaaagaggatctagaatatatctag-atgtgtatgtttatttatctatatt 305 Query: 61 ctatattta 69 ||||||||| Sbjct: 304 ctatattta 296
>gb|AF276969.1| Spartina anglica ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 680 Score = 186 bits (94), Expect = 5e-44 Identities = 148/167 (88%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 114 cttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaatatttact 173 ||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 206 cttattgaatcatagtaaagtattctaatccaataaagatttcgcgggcgaatatttact 147 Query: 174 ctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnnggtttgt 233 ||||| |||||||||||||||||||||| |||||||||||| ||| ||||||| Sbjct: 146 ctttcttgtcttatttgttaatttataaccttaccaaataaagcaatttttttggtttgt 87 Query: 234 tccgccatcccacccaatgaagtgttaggattcttttcaataaaatc 280 ||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 86 tccgccatccc-cccaatgaagtattaggattcttttcaataaaatc 41 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 96 aatatccttatttttactcttattgaatc 124 |||||||||||||||| ||||||||||| Sbjct: 272 aatatccttatttttaaccttattgaatc 244
>gb|AF276968.1| Spartina alterniflora ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 680 Score = 186 bits (94), Expect = 5e-44 Identities = 148/167 (88%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 114 cttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaatatttact 173 ||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 206 cttattgaatcatagtaaagtattctaatccaataaagatttcgcgggcgaatatttact 147 Query: 174 ctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnnggtttgt 233 ||||| |||||||||||||||||||||| |||||||||||| ||| ||||||| Sbjct: 146 ctttcttgtcttatttgttaatttataaccttaccaaataaagcaatttttttggtttgt 87 Query: 234 tccgccatcccacccaatgaagtgttaggattcttttcaataaaatc 280 ||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 86 tccgccatccc-cccaatgaagtattaggattcttttcaataaaatc 41 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 96 aatatccttatttttactcttattgaatc 124 |||||||||||||||| ||||||||||| Sbjct: 272 aatatccttatttttaaccttattgaatc 244
>gb|AF133489.1|AF133489 Anomochloa marantoidea ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1222 Score = 184 bits (93), Expect = 2e-43 Identities = 152/169 (89%), Gaps = 2/169 (1%) Strand = Plus / Minus Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 285 |||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||| Sbjct: 632 ggtttgttccgccatcccacccaatgaagtgttaggattcgttttcaaaagaatcctatg 573 Query: 286 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 345 | |||| ||||||||||||||||| |||||||| | |||||||||||||||| || ||| Sbjct: 572 cagtcatgggttctgtcgttcccacagcttctccattaatggttaggtctgaaccctgca 513 Query: 346 acggagcttccaa-aaaatttctttccgagttaattttctcagttttat 393 | ||||||||||| |||||| ||||||||| |||||||||||||||| Sbjct: 512 atggagcttccaaccaaatttatttccgagtccattttctcagttttat 464 Score = 65.9 bits (33), Expect = 1e-07 Identities = 79/93 (84%), Gaps = 1/93 (1%) Strand = Plus / Minus Query: 92 aaaaaatatccttatttttactcttattgaatcgcggtaaagtattctaattc-aataag 150 ||||||| || || |||||| |||||||||||| || |||||||| | | | ||||| Sbjct: 782 aaaaaatctctttctttttattcttattgaatcatgggaaagtattgttactataataaa 723 Query: 151 aatttcgcgggcgaatatttactctttcctgtc 183 |||||||||||||||||||||||||||||||| Sbjct: 722 gatttcgcgggcgaatatttactctttcctgtc 690 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 473 tattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagt 532 |||| ||| |||||||| ||||| ||||||||| ||||||||||||||||||||| | | Sbjct: 403 tattctatggatgctttatcacactgccttttagaatgtaattcatagaccatacatatt 344 Query: 533 ggaat 537 ||||| Sbjct: 343 ggaat 339
>gb|AF276970.1| Spartina maritima ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 656 Score = 180 bits (91), Expect = 3e-42 Identities = 136/152 (89%), Gaps = 1/152 (0%) Strand = Plus / Minus Query: 129 taaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatt 188 |||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 191 taaagtattctaatccaataaagatttcgcgggcgaatatttactctttcttgtcttatt 132 Query: 189 tgttaatttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 248 ||||||||||||| |||||||||||| ||| |||||||||||||||||| ||| Sbjct: 131 tgttaatttataaccttaccaaataaagcaatttttttggtttgttccgccatccc-ccc 73 Query: 249 aatgaagtgttaggattcttttcaataaaatc 280 |||||||| ||||||||||||||||||||||| Sbjct: 72 aatgaagtattaggattcttttcaataaaatc 41 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 96 aatatccttatttttactcttattgaatc 124 |||||||||||||||| ||||||||||| Sbjct: 248 aatatccttatttttaaccttattgaatc 220
>gb|AY855878.1| Musa textilis voucher NEU0001 (CIRAD) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1033 Score = 101 bits (51), Expect = 2e-18 Identities = 162/194 (83%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 285 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||||||||| Sbjct: 482 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcctatg 541 Query: 286 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 345 | ||| |||||| |||||||||| |||||||| | |||||||||||||||| | ||| Sbjct: 542 cagtcacaggttccgtcgttcccatagcttctccattaatggttaggtctgaactctgca 601 Query: 346 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 403 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 602 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 659 Query: 404 ggctctttattatt 417 |||||||||||||| Sbjct: 660 ggctctttattatt 673 Score = 71.9 bits (36), Expect = 2e-09 Identities = 55/60 (91%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 478 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaat 537 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | |||||| Sbjct: 690 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 748 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 153 tttcgcgggcgaatatttactctttcctgtcttatt 188 ||||||||||||||||| ||||||| |||| ||||| Sbjct: 402 tttcgcgggcgaatattgactctttactgttttatt 437
>gb|AY855877.1| Musa troglodytarum voucher NEU0388 (CIRAD) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1032 Score = 101 bits (51), Expect = 2e-18 Identities = 162/194 (83%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 285 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||||||||| Sbjct: 482 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcctatg 541 Query: 286 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 345 | ||| |||||| |||||||||| |||||||| | |||||||||||||||| | ||| Sbjct: 542 cagtcacaggttccgtcgttcccatagcttctccattaatggttaggtctgaactctgca 601 Query: 346 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 403 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 602 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 659 Query: 404 ggctctttattatt 417 |||||||||||||| Sbjct: 660 ggctctttattatt 673 Score = 71.9 bits (36), Expect = 2e-09 Identities = 55/60 (91%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 478 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaat 537 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | |||||| Sbjct: 690 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 748 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 153 tttcgcgggcgaatatttactctttcctgtcttatt 188 ||||||||||||||||| ||||||| |||| ||||| Sbjct: 402 tttcgcgggcgaatattgactctttactgttttatt 437
>gb|AY855876.1| Musa troglodytarum voucher NEU0385 (CIRAD) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1032 Score = 101 bits (51), Expect = 2e-18 Identities = 162/194 (83%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 285 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||||||||| Sbjct: 482 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcctatg 541 Query: 286 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 345 | ||| |||||| |||||||||| |||||||| | |||||||||||||||| | ||| Sbjct: 542 cagtcacaggttccgtcgttcccatagcttctccattaatggttaggtctgaactctgca 601 Query: 346 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 403 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 602 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 659 Query: 404 ggctctttattatt 417 |||||||||||||| Sbjct: 660 ggctctttattatt 673 Score = 71.9 bits (36), Expect = 2e-09 Identities = 55/60 (91%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 478 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaat 537 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | |||||| Sbjct: 690 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 748 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 153 tttcgcgggcgaatatttactctttcctgtcttatt 188 ||||||||||||||||| ||||||| |||| ||||| Sbjct: 402 tttcgcgggcgaatattgactctttactgttttatt 437
>gb|AY855875.1| Musa jackeyi voucher NEU0389 (CIRAD) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1032 Score = 101 bits (51), Expect = 2e-18 Identities = 162/194 (83%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 285 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||||||||| Sbjct: 482 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcctatg 541 Query: 286 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 345 | ||| |||||| |||||||||| |||||||| | |||||||||||||||| | ||| Sbjct: 542 cagtcacaggttccgtcgttcccatagcttctccattaatggttaggtctgaactctgca 601 Query: 346 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 403 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 602 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 659 Query: 404 ggctctttattatt 417 |||||||||||||| Sbjct: 660 ggctctttattatt 673 Score = 71.9 bits (36), Expect = 2e-09 Identities = 55/60 (91%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 478 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaat 537 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | |||||| Sbjct: 690 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 748 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 153 tttcgcgggcgaatatttactctttcctgtcttatt 188 ||||||||||||||||| ||||||| |||| ||||| Sbjct: 402 tttcgcgggcgaatattgactctttactgttttatt 437
>gb|AY500680.1| Physocarpus opulifolius voucher JSh1015 rpl16 gene, intron; chloroplast Length = 932 Score = 93.7 bits (47), Expect = 6e-16 Identities = 108/127 (85%), Gaps = 1/127 (0%) Strand = Plus / Minus Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 285 |||| |||||||||||| |||||||||| ||||||||| ||||||||| |||| |||| Sbjct: 530 ggttcgttccgccatcctacccaatgaatcattaggattcgttttcaatagaatcttatg 471 Query: 286 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 345 | ||| |||||||||||||||||| |||||| | ||||||||||||||||| | || Sbjct: 470 cattcacaggttctgtcgttcccaccacttctcgattaatggttaggtctgaattctaca 411 Query: 346 acggagc 352 ||||||| Sbjct: 410 acggagc 404 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 154 ttcgcgggcgaatatttactctttc 178 ||||||||||||||||||||||||| Sbjct: 615 ttcgcgggcgaatatttactctttc 591
>gb|AY727405.1| Trillium ovatum rpL16 gene, intron; chloroplast Length = 988 Score = 93.7 bits (47), Expect = 6e-16 Identities = 108/127 (85%), Gaps = 1/127 (0%) Strand = Plus / Minus Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 285 |||| ||||||||||||||||||||||| ||||||||| ||||||||| |||||||| Sbjct: 561 ggttcgttccgccatcccacccaatgaatcattaggattcgttttcaatagaatcctata 502 Query: 286 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 345 ||||| |||||||||||||||| ||||| || | |||||||||| |||||| | ||| Sbjct: 501 caatcacgggttctgtcgttcccatagcttcgccattaatggttaggcctgaattctgca 442 Query: 346 acggagc 352 | ||||| Sbjct: 441 atggagc 435 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 481 tgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaat 537 ||||||||| ||||| |||||||||||| | |||||||||||||||| | |||||| Sbjct: 347 tgatgctttatcacactgccttttatgagatgattcatagaccatacatattggaat 291 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 154 ttcgcgggcgaatatttactctttc 178 |||||||||||||||| |||||||| Sbjct: 649 ttcgcgggcgaatattgactctttc 625
>gb|AY855889.1| Musa x paradisiaca voucher TM128 ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1074 Score = 93.7 bits (47), Expect = 6e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 285 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||||||||| Sbjct: 460 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcctatg 519 Query: 286 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 345 | ||| |||||| |||||||||| |||||||| | |||||||||| ||||| | ||| Sbjct: 520 cagtcacaggttccgtcgttcccatagcttctccgttaatggttaggcctgaactctgca 579 Query: 346 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 403 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 580 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 637 Query: 404 ggctctttattatt 417 |||||||||||||| Sbjct: 638 ggctctttattatt 651 Score = 71.9 bits (36), Expect = 2e-09 Identities = 55/60 (91%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 478 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaat 537 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | |||||| Sbjct: 677 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 735 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 153 tttcgcgggcgaatatttactctttcctgtcttatt 188 ||||||||||||||||||||||||| |||| ||||| Sbjct: 380 tttcgcgggcgaatatttactctttactgttttatt 415
>gb|AY855888.1| Musa x paradisiaca voucher ITC0677 ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 93.7 bits (47), Expect = 6e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 285 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||||||||| Sbjct: 460 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcctatg 519 Query: 286 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 345 | ||| |||||| |||||||||| |||||||| | |||||||||| ||||| | ||| Sbjct: 520 cagtcacaggttccgtcgttcccatagcttctccgttaatggttaggcctgaactctgca 579 Query: 346 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 403 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 580 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 637 Query: 404 ggctctttattatt 417 |||||||||||||| Sbjct: 638 ggctctttattatt 651 Score = 71.9 bits (36), Expect = 2e-09 Identities = 55/60 (91%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 478 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaat 537 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | |||||| Sbjct: 677 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 735 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 153 tttcgcgggcgaatatttactctttcctgtcttatt 188 ||||||||||||||||||||||||| |||| ||||| Sbjct: 380 tttcgcgggcgaatatttactctttactgttttatt 415
>gb|AY855886.1| Musa x paradisiaca voucher ITC0983 ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1074 Score = 93.7 bits (47), Expect = 6e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 285 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||||||||| Sbjct: 460 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcctatg 519 Query: 286 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 345 | ||| |||||| |||||||||| |||||||| | |||||||||| ||||| | ||| Sbjct: 520 cagtcacaggttccgtcgttcccatagcttctccgttaatggttaggcctgaactctgca 579 Query: 346 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 403 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 580 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 637 Query: 404 ggctctttattatt 417 |||||||||||||| Sbjct: 638 ggctctttattatt 651 Score = 71.9 bits (36), Expect = 2e-09 Identities = 55/60 (91%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 478 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaat 537 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | |||||| Sbjct: 677 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 735 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 153 tttcgcgggcgaatatttactctttcctgtcttatt 188 ||||||||||||||||||||||||| |||| ||||| Sbjct: 380 tttcgcgggcgaatatttactctttactgttttatt 415
>gb|AY855885.1| Musa x paradisiaca voucher TM139 ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1074 Score = 93.7 bits (47), Expect = 6e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 285 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||||||||| Sbjct: 460 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcctatg 519 Query: 286 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 345 | ||| |||||| |||||||||| |||||||| | |||||||||| ||||| | ||| Sbjct: 520 cagtcacaggttccgtcgttcccatagcttctccgttaatggttaggcctgaactctgca 579 Query: 346 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 403 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 580 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 637 Query: 404 ggctctttattatt 417 |||||||||||||| Sbjct: 638 ggctctttattatt 651 Score = 71.9 bits (36), Expect = 2e-09 Identities = 55/60 (91%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 478 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaat 537 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | |||||| Sbjct: 677 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 735 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 153 tttcgcgggcgaatatttactctttcctgtcttatt 188 ||||||||||||||||||||||||| |||| ||||| Sbjct: 380 tttcgcgggcgaatatttactctttactgttttatt 415
>gb|AY855884.1| Musa acuminata voucher TM71 (QSG) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 93.7 bits (47), Expect = 6e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 285 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||||||||| Sbjct: 460 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcctatg 519 Query: 286 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 345 | ||| |||||| |||||||||| |||||||| | |||||||||| ||||| | ||| Sbjct: 520 cagtcacaggttccgtcgttcccatagcttctccgttaatggttaggcctgaactctgca 579 Query: 346 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 403 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 580 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 637 Query: 404 ggctctttattatt 417 |||||||||||||| Sbjct: 638 ggctctttattatt 651 Score = 71.9 bits (36), Expect = 2e-09 Identities = 55/60 (91%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 478 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaat 537 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | |||||| Sbjct: 677 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 735 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 153 tttcgcgggcgaatatttactctttcctgtcttatt 188 ||||||||||||||||||||||||| |||| ||||| Sbjct: 380 tttcgcgggcgaatatttactctttactgttttatt 415
>gb|AY855881.1| Musa banksii voucher ITC0254 (CIRAD) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 93.7 bits (47), Expect = 6e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 285 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||||||||| Sbjct: 460 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcctatg 519 Query: 286 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 345 | ||| |||||| |||||||||| |||||||| | |||||||||| ||||| | ||| Sbjct: 520 cagtcacaggttccgtcgttcccatagcttctccgttaatggttaggcctgaactctgca 579 Query: 346 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 403 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 580 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 637 Query: 404 ggctctttattatt 417 |||||||||||||| Sbjct: 638 ggctctttattatt 651 Score = 71.9 bits (36), Expect = 2e-09 Identities = 55/60 (91%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 478 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaat 537 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | |||||| Sbjct: 677 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 735 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 153 tttcgcgggcgaatatttactctttcctgtcttatt 188 ||||||||||||||||||||||||| |||| ||||| Sbjct: 380 tttcgcgggcgaatatttactctttactgttttatt 415
>gb|AY855880.1| Musa acuminata subsp. malaccensis voucher ITC0250 (CIRAD) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 93.7 bits (47), Expect = 6e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 285 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||||||||| Sbjct: 460 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcctatg 519 Query: 286 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 345 | ||| |||||| |||||||||| |||||||| | |||||||||| ||||| | ||| Sbjct: 520 cagtcacaggttccgtcgttcccatagcttctccgttaatggttaggcctgaactctgca 579 Query: 346 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 403 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 580 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 637 Query: 404 ggctctttattatt 417 |||||||||||||| Sbjct: 638 ggctctttattatt 651 Score = 71.9 bits (36), Expect = 2e-09 Identities = 55/60 (91%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 478 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaat 537 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | |||||| Sbjct: 677 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 735 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 153 tttcgcgggcgaatatttactctttcctgtcttatt 188 ||||||||||||||||||||||||| |||| ||||| Sbjct: 380 tttcgcgggcgaatatttactctttactgttttatt 415
>gb|AY855879.1| Musa acuminata subsp. malaccensis voucher TM68 ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 93.7 bits (47), Expect = 6e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 285 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||||||||| Sbjct: 460 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcctatg 519 Query: 286 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 345 | ||| |||||| |||||||||| |||||||| | |||||||||| ||||| | ||| Sbjct: 520 cagtcacaggttccgtcgttcccatagcttctccgttaatggttaggcctgaactctgca 579 Query: 346 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 403 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 580 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 637 Query: 404 ggctctttattatt 417 |||||||||||||| Sbjct: 638 ggctctttattatt 651 Score = 71.9 bits (36), Expect = 2e-09 Identities = 55/60 (91%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 478 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaat 537 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | |||||| Sbjct: 677 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 735 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 153 tttcgcgggcgaatatttactctttcctgtcttatt 188 ||||||||||||||||||||||||| |||| ||||| Sbjct: 380 tttcgcgggcgaatatttactctttactgttttatt 415
>gb|DQ100233.1| Purshia tridentata voucher 20A ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 787 Score = 89.7 bits (45), Expect = 9e-15 Identities = 103/121 (85%), Gaps = 1/121 (0%) Strand = Plus / Minus Query: 233 ttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatggaatca 291 ||||||||||| |||||||||| ||||||||| ||||||||| |||| |||| | ||| Sbjct: 511 ttccgccatcctacccaatgaatcattaggattcgttttcaatagaatcttatgcattca 452 Query: 292 taggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggag 351 |||||||||||||||||| |||||| | ||||||||||||||||| | |||||||| Sbjct: 451 caggttctgtcgttcccaccacttctcgattaatggttaggtctgaattctacaacggag 392 Query: 352 c 352 | Sbjct: 391 c 391 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 154 ttcgcgggcgaatatttactctttc 178 ||||||||||||||||||||||||| Sbjct: 602 ttcgcgggcgaatatttactctttc 578
>gb|DQ100231.1| Purshia tridentata voucher 1-1 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 787 Score = 89.7 bits (45), Expect = 9e-15 Identities = 103/121 (85%), Gaps = 1/121 (0%) Strand = Plus / Minus Query: 233 ttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatggaatca 291 ||||||||||| |||||||||| ||||||||| ||||||||| |||| |||| | ||| Sbjct: 511 ttccgccatcctacccaatgaatcattaggattcgttttcaatagaatcttatgcattca 452 Query: 292 taggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggag 351 |||||||||||||||||| |||||| | ||||||||||||||||| | |||||||| Sbjct: 451 caggttctgtcgttcccaccacttctcgattaatggttaggtctgaattctacaacggag 392 Query: 352 c 352 | Sbjct: 391 c 391 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 154 ttcgcgggcgaatatttactctttc 178 ||||||||||||||||||||||||| Sbjct: 602 ttcgcgggcgaatatttactctttc 578
>gb|DQ100229.1| Purshia tridentata voucher B23 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 787 Score = 89.7 bits (45), Expect = 9e-15 Identities = 103/121 (85%), Gaps = 1/121 (0%) Strand = Plus / Minus Query: 233 ttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatggaatca 291 ||||||||||| |||||||||| ||||||||| ||||||||| |||| |||| | ||| Sbjct: 511 ttccgccatcctacccaatgaatcattaggattcgttttcaatagaatcttatgcattca 452 Query: 292 taggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggag 351 |||||||||||||||||| |||||| | ||||||||||||||||| | |||||||| Sbjct: 451 caggttctgtcgttcccaccacttctcgattaatggttaggtctgaattctacaacggag 392 Query: 352 c 352 | Sbjct: 391 c 391 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 154 ttcgcgggcgaatatttactctttc 178 ||||||||||||||||||||||||| Sbjct: 602 ttcgcgggcgaatatttactctttc 578
>gb|AY151625.1| Stylapterus ericoides subsp. pallidus rpl16 gene, intron; chloroplast gene for chloroplast product Length = 956 Score = 89.7 bits (45), Expect = 9e-15 Identities = 108/128 (84%), Gaps = 2/128 (1%) Strand = Plus / Minus Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattc--ttttcaataaaatcctat 284 |||| ||||||||||||||||||||||| | ||||||||| |||||||| ||||||||| Sbjct: 506 ggttcgttccgccatcccacccaatgaattattaggattcgtttttcaatgaaatcctat 447 Query: 285 ggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgc 344 | | ||| |||||| |||||||||| | ||||| | ||||||||||| ||||| | | Sbjct: 446 gtattcacaggttccgtcgttcccatcgtttctcaattaatggttaggtttgaattctac 387 Query: 345 aacggagc 352 |||||||| Sbjct: 386 aacggagc 379 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 154 ttcgcgggcgaatatttactctttc 178 ||||||||||||||||| ||||||| Sbjct: 591 ttcgcgggcgaatatttcctctttc 567
>gb|AY151624.1| Stylapterus ericifolius rpl16 gene, intron; chloroplast gene for chloroplast product Length = 956 Score = 89.7 bits (45), Expect = 9e-15 Identities = 108/128 (84%), Gaps = 2/128 (1%) Strand = Plus / Minus Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattc--ttttcaataaaatcctat 284 |||| ||||||||||||||||||||||| | ||||||||| |||||||| ||||||||| Sbjct: 506 ggttcgttccgccatcccacccaatgaattattaggattcatttttcaatgaaatcctat 447 Query: 285 ggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgc 344 | | ||| |||||| |||||||||| | ||||| | ||||||||||| ||||| | | Sbjct: 446 gtattcacaggttccgtcgttcccatcgtttctcaattaatggttaggtttgaattctac 387 Query: 345 aacggagc 352 |||||||| Sbjct: 386 aacggagc 379 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 154 ttcgcgggcgaatatttactctttc 178 ||||||||||||||||| ||||||| Sbjct: 591 ttcgcgggcgaatatttcctctttc 567
>gb|AY151623.1| Sonderothamnus speciosus rpl16 gene, intron; chloroplast gene for chloroplast product Length = 965 Score = 89.7 bits (45), Expect = 9e-15 Identities = 108/128 (84%), Gaps = 2/128 (1%) Strand = Plus / Minus Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattc--ttttcaataaaatcctat 284 |||| ||||||||||||||||||||||| | ||||||||| |||||||| ||||||||| Sbjct: 514 ggttcgttccgccatcccacccaatgaattattaggattcgtttttcaatgaaatcctat 455 Query: 285 ggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgc 344 | | ||| |||||| |||||||||| | ||||| | ||||||||||| ||||| | | Sbjct: 454 gtattcacaggttccgtcgttcccatcgtttctcaattaatggttaggtttgaattctac 395 Query: 345 aacggagc 352 |||||||| Sbjct: 394 aacggagc 387 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 154 ttcgcgggcgaatatttactctttc 178 ||||||||||||||||| ||||||| Sbjct: 599 ttcgcgggcgaatatttcctctttc 575
>gb|AY151622.1| Sonderothamnus petraeus rpl16 gene, intron; chloroplast gene for chloroplast product Length = 972 Score = 89.7 bits (45), Expect = 9e-15 Identities = 108/128 (84%), Gaps = 2/128 (1%) Strand = Plus / Minus Query: 227 ggtttgttccgccatcccacccaatgaagtgttaggattc--ttttcaataaaatcctat 284 |||| ||||||||||||||||||||||| | ||||||||| |||||||| ||||||||| Sbjct: 514 ggttcgttccgccatcccacccaatgaattattaggattcgtttttcaatgaaatcctat 455 Query: 285 ggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgc 344 | | ||| |||||| |||||||||| | ||||| | ||||||||||| ||||| | | Sbjct: 454 gtattcacaggttccgtcgttcccatcgtttctcaattaatggttaggtttgaattctac 395 Query: 345 aacggagc 352 |||||||| Sbjct: 394 aacggagc 387 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 154 ttcgcgggcgaatatttactctttc 178 ||||||||||||||||| ||||||| Sbjct: 606 ttcgcgggcgaatatttcctctttc 582 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8,175,883 Number of Sequences: 3902068 Number of extensions: 8175883 Number of successful extensions: 206885 Number of sequences better than 10.0: 2895 Number of HSP's better than 10.0 without gapping: 2867 Number of HSP's successfully gapped in prelim test: 31 Number of HSP's that attempted gapping in prelim test: 196068 Number of HSP's gapped (non-prelim): 9293 length of query: 574 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 551 effective length of database: 17,143,297,704 effective search space: 9445957034904 effective search space used: 9445957034904 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
