Clone Name | rbasd23m24 |
---|---|
Clone Library Name | barley_pub |
>MGR4_HUMAN (Q14833) Metabotropic glutamate receptor 4 precursor (mGluR4)| Length = 912 Score = 32.7 bits (73), Expect = 1.2 Identities = 15/40 (37%), Positives = 18/40 (45%) Frame = -2 Query: 481 CSMHCNTCDGYSYSTNVYTFKLLVVGSRILPSCQSRRGCR 362 C HC C GY Y + YT K R ++R GCR Sbjct: 538 CCWHCEPCTGYQYQVDRYTCKTCPYDMR---PTENRTGCR 574
>PLCG1_MOUSE (Q62077) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase| gamma 1 (EC 3.1.4.11) (Phosphoinositide phospholipase C) (PLC-gamma-1) (Phospholipase C-gamma-1) (PLC-II) (PLC-148) Length = 1302 Score = 32.0 bits (71), Expect = 2.0 Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 4/53 (7%) Frame = -3 Query: 309 HLCAAM-VPVFLTLMLSKRTIEPDRVSL---LQMWKISWREGGSKDSNTVDVK 163 HLC ++ V +TL SK++ P+R + L+ +I+W G K ++D++ Sbjct: 24 HLCRSLEVGTVMTLFYSKKSQRPERKTFQVKLETRQITWSRGADKIEGSIDIR 76
>PLCG1_RAT (P10686) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase| gamma 1 (EC 3.1.4.11) (Phosphoinositide phospholipase C) (PLC-gamma-1) (Phospholipase C-gamma-1) (PLC-II) (PLC-148) Length = 1290 Score = 32.0 bits (71), Expect = 2.0 Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 4/53 (7%) Frame = -3 Query: 309 HLCAAM-VPVFLTLMLSKRTIEPDRVSL---LQMWKISWREGGSKDSNTVDVK 163 HLC ++ V +TL SK++ P+R + L+ +I+W G K ++D++ Sbjct: 24 HLCRSLEVGTVMTLFYSKKSQRPERKTFQVKLETRQITWSRGADKIEGSIDIR 76
>MGR6_RAT (P35349) Metabotropic glutamate receptor 6 precursor (mGluR6)| Length = 871 Score = 31.2 bits (69), Expect = 3.5 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = -2 Query: 481 CSMHCNTCDGYSYSTNVYTFKLLVVGSRILPSCQSRRGCRQT 356 C HC CDGY + + +T + R P + GCR T Sbjct: 530 CCWHCEACDGYRFQVDEFTCEACPGDMRPTP---NHTGCRPT 568
>MGR6_RABIT (Q863I4) Metabotropic glutamate receptor 6 precursor (mGluR6)| Length = 868 Score = 31.2 bits (69), Expect = 3.5 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = -2 Query: 481 CSMHCNTCDGYSYSTNVYTFKLLVVGSRILPSCQSRRGCRQT 356 C HC CDGY + + +T + R P + GCR T Sbjct: 527 CCWHCEACDGYRFQVDEFTCEACPRDMRPTP---NHTGCRPT 565
>MGR6_HUMAN (O15303) Metabotropic glutamate receptor 6 precursor (mGluR6)| Length = 877 Score = 31.2 bits (69), Expect = 3.5 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = -2 Query: 481 CSMHCNTCDGYSYSTNVYTFKLLVVGSRILPSCQSRRGCRQT 356 C HC CDGY + + +T + R P + GCR T Sbjct: 536 CCWHCEACDGYRFQVDEFTCEACPGDMRPTP---NHTGCRPT 574
>RL20_PSEFL (Q9X6E8) 50S ribosomal protein L20| Length = 118 Score = 30.8 bits (68), Expect = 4.5 Identities = 18/54 (33%), Positives = 30/54 (55%) Frame = +2 Query: 494 AYGRRSSKKLQYRMLSAPAITRGARDFVPALSSTLSMMKMATIDVKAIVIGNLS 655 AY R KK Q+R L I GAR+ + S ++ +K A+I++ V+ +L+ Sbjct: 46 AYRDRRQKKRQFRALWIARINAGARNNGLSYSRLIAGLKKASIEIDRKVLADLA 99
>MGR6_MOUSE (Q5NCH9) Metabotropic glutamate receptor 6 precursor (mGluR6)| Length = 871 Score = 30.8 bits (68), Expect = 4.5 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = -2 Query: 481 CSMHCNTCDGYSYSTNVYTFKLLVVGSRILPSCQSRRGCRQT 356 C HC CDGY + + +T + R P + GCR T Sbjct: 530 CCWHCEACDGYRFQVDEFTCEACPGHMRPTP---NHTGCRPT 568
>NU5C_MARPO (P06264) NAD(P)H-quinone oxidoreductase chain 5, chloroplast (EC| 1.6.5.-) (NAD(P)H dehydrogenase, chain 5) (NADH-plastoquinone oxidoreductase chain 5) Length = 692 Score = 30.4 bits (67), Expect = 5.9 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = +1 Query: 67 YSDGYYFYTSGYIMKNTYLLLFRRS*NCSIIIFDIYRVAIF 189 YSD Y FY GYI YL LF S ++ ++ +V IF Sbjct: 110 YSDSYMFYDEGYIKFFCYLSLFTASMLGLVLSPNLIQVYIF 150
>RL20_PSEPK (Q88K24) 50S ribosomal protein L20| Length = 118 Score = 30.0 bits (66), Expect = 7.7 Identities = 18/54 (33%), Positives = 29/54 (53%) Frame = +2 Query: 494 AYGRRSSKKLQYRMLSAPAITRGARDFVPALSSTLSMMKMATIDVKAIVIGNLS 655 AY R KK Q+R L I GAR + S ++ +K A+I++ V+ +L+ Sbjct: 46 AYRDRRQKKRQFRALWIARINAGARTNGLSYSRLIAGLKKASIEIDRKVLADLA 99
>RL20_NEIMA (Q9JVA1) 50S ribosomal protein L20| Length = 119 Score = 30.0 bits (66), Expect = 7.7 Identities = 17/54 (31%), Positives = 30/54 (55%) Frame = +2 Query: 494 AYGRRSSKKLQYRMLSAPAITRGARDFVPALSSTLSMMKMATIDVKAIVIGNLS 655 AY R +K Q+R L I GAR+ + S ++ +K A+I++ V+ +L+ Sbjct: 46 AYRDRRQRKRQFRQLWIVRINAGARENGLSYSKFMNGLKRASIEIDRKVLADLA 99 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 105,292,071 Number of Sequences: 219361 Number of extensions: 2188728 Number of successful extensions: 5330 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 5101 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5330 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7592921998 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)