>ATCU_ECOLI (Q59385) Copper-transporting P-type ATPase (EC 3.6.3.4)|
          Length = 833

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 20/55 (36%), Positives = 29/55 (52%)
 Frame = -3

Query: 542 MDCEGCERRVKNAVKSIRGVTSVAVNPKMSKVTVTGHVEPRKVLERVKSTGKAAE 378
           M C  C  RV+NA++S+ GVT   VN       V G   P+ +++ V+  G  AE
Sbjct: 107 MSCASCVTRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKAGYGAE 161

>ATCU_ECO57 (Q8XD24) Copper-transporting P-type ATPase (EC 3.6.3.4)|
          Length = 833

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 20/55 (36%), Positives = 29/55 (52%)
 Frame = -3

Query: 542 MDCEGCERRVKNAVKSIRGVTSVAVNPKMSKVTVTGHVEPRKVLERVKSTGKAAE 378
           M C  C  RV+NA++S+ GVT   VN       V G   P+ +++ V+  G  AE
Sbjct: 107 MSCASCVTRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKAGYGAE 161

>ATCU_SALTY (Q8ZR95) Copper-transporting P-type ATPase (EC 3.6.3.4)|
          Length = 832

 Score = 36.2 bits (82), Expect = 0.10
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = -3

Query: 542 MDCEGCERRVKNAVKSIRGVTSVAVNPKMSKVTVTGHVEPRKVLERVKSTGKAAE 378
           M C  C  RV++A++S+ GVT   VN       V G      +++ V+  G  AE
Sbjct: 106 MSCASCVTRVQHALQSVPGVTQARVNLAERTALVMGSASAADLVQAVEKAGYGAE 160

>ATCU_SALTI (Q8Z8S4) Copper-transporting P-type ATPase (EC 3.6.3.4)|
          Length = 832

 Score = 36.2 bits (82), Expect = 0.10
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = -3

Query: 542 MDCEGCERRVKNAVKSIRGVTSVAVNPKMSKVTVTGHVEPRKVLERVKSTGKAAE 378
           M C  C  RV++A++S+ GVT   VN       V G      +++ V+  G  AE
Sbjct: 106 MSCASCVTRVQHALQSVPGVTQARVNLAERTALVMGSASAADLVQAVEKAGYGAE 160

>CADA2_LISMO (Q60048) Probable cadmium-transporting ATPase (EC 3.6.3.3) (Cadmium|
           efflux ATPase)
          Length = 711

 Score = 36.2 bits (82), Expect = 0.10
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = -3

Query: 542 MDCEGCERRVKNAVKSIRGVTSVAVNPKMSKVTVTGHVEPRKV 414
           + C  C  + +  VK I GVT   VN   SK+TVTG    ++V
Sbjct: 12  LSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEASIQQV 54

>ATCU_RHIME (Q9X5X3) Copper-transporting P-type ATPase (EC 3.6.3.4)|
          Length = 827

 Score = 35.8 bits (81), Expect = 0.13
 Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = -3

Query: 542 MDCEGCERRVKNAVKSIRGVTSVAVNPKMSKVTV--TGHVEPRKVLERVKSTGKA 384
           M C  C RRV+ A+ ++ GV S  VN    + TV   G  E   VL  V+  G A
Sbjct: 24  MTCASCVRRVEKAIAAVPGVASANVNLATERATVQFNGVPETTSVLRAVEKAGYA 78

>PSBB_ANASP (P20093) Photosystem II P680 chlorophyll A apoprotein (CP-47|
           protein)
          Length = 509

 Score = 35.4 bits (80), Expect = 0.17
 Identities = 22/74 (29%), Positives = 29/74 (39%)
 Frame = -3

Query: 422 RKVLERVKSTGKAAEMWPYVPYTLATYPYVGGAYDKKAPAGFVRSAPQAMADPAAPEIHY 243
           R+V   V      +E W  +P  LA Y YVG   +  A  G  R+ P    D  A     
Sbjct: 286 RRVQSSVAQGASLSEAWSQIPEKLAFYDYVG---NSPAKGGLFRTGPMVKGDGIAQSWQG 342

Query: 242 MNMFNDEDVNACTV 201
             +F D +    TV
Sbjct: 343 HGVFKDAEGRELTV 356

>ATCU_YERPE (Q8ZCA7) Copper-transporting P-type ATPase (EC 3.6.3.4)|
          Length = 961

 Score = 35.0 bits (79), Expect = 0.22
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = -3

Query: 542 MDCEGCERRVKNAVKSIRGVTSVAVNPKMSKVTVTGHVEPRKVLERVKSTGKAAEM 375
           M C  C  +V+NA++ + GV    VN       VTG      ++  VK+ G  AE+
Sbjct: 235 MSCASCVSKVQNALQRVDGVQVARVNLAERSALVTGTQNNEALIAAVKNAGYGAEI 290



 Score = 34.3 bits (77), Expect = 0.38
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = -3

Query: 542 MDCEGCERRVKNAVKSIRGVTSVAVNPKMSKVTVTGHVEPRKVLERVKSTGKAA 381
           + C  C +RVK A++S   V    VN   +K  VTG  +   ++E +K TG  A
Sbjct: 12  LSCMNCAQRVKAALESREDVHHAEVNVHYAK--VTGEADTHALIETIKQTGYQA 63

>CCS1_YEAST (P40202) Superoxide dismutase 1 copper chaperone|
          Length = 249

 Score = 34.7 bits (78), Expect = 0.29
 Identities = 14/56 (25%), Positives = 30/56 (53%)
 Frame = -3

Query: 548 VKMDCEGCERRVKNAVKSIRGVTSVAVNPKMSKVTVTGHVEPRKVLERVKSTGKAA 381
           + M CE C   +K  +K++ G+ S+  + +   ++V   V P  ++  +++ GK A
Sbjct: 13  IPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDA 68

>ATCU2_RHIME (P58342) Copper-transporting ATPase 2 (EC 3.6.3.4)|
          Length = 827

 Score = 34.3 bits (77), Expect = 0.38
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = -3

Query: 542 MDCEGCERRVKNAVKSIRGVTSVAVNPKMSKVTV--TGHVEPRKVLERVKSTGKA 384
           M C  C RRV+ A+ ++ GV S  VN    + TV   G  +   VL  ++  G A
Sbjct: 24  MTCASCVRRVEKAITAVPGVASANVNLATERATVQFDGEPDTLAVLHAIEKAGYA 78



 Score = 33.1 bits (74), Expect = 0.85
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -3

Query: 542 MDCEGCERRVKNAVKSIRGVTSVAVNPKMSKVTVT 438
           M C  C  RV+ A+K++ GV   AVN    K TV+
Sbjct: 91  MTCASCVSRVEKALKAVPGVADAAVNLATEKATVS 125

>ATZN_ECOLI (P37617) Lead, cadmium, zinc and mercury-transporting ATPase (EC|
           3.6.3.3) (EC 3.6.3.5)
          Length = 732

 Score = 33.9 bits (76), Expect = 0.50
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = -3

Query: 542 MDCEGCERRVKNAVKSIRGVTSVAVNPKMSKVTVTGHVEPRKVLE 408
           MDC  C R+V+NAV+ + GV  V V     K+ V    + R  +E
Sbjct: 57  MDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVE 101

>HXK_SCHMA (Q26609) Hexokinase (EC 2.7.1.1)|
          Length = 451

 Score = 33.1 bits (74), Expect = 0.85
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
 Frame = -3

Query: 467 NPKMSKVTVTGHVEPRKVLERV------KSTGKAAEMWPYVPYTLATYPYVGGAYDKKAP 306
           N ++  VT+ G  +  ++ ER       K +G   E++ Y+  TLA +    G  DKK  
Sbjct: 79  NYRVLSVTLEGKGKSPRIQERTYCIPAEKMSGSGTELFKYIAETLADFLENNGMKDKKFD 138

Query: 305 AGFVRSAP 282
            GF  S P
Sbjct: 139 LGFTFSFP 146

>ATCU1_RHIME (P58341) Copper-transporting ATPase 1 (EC 3.6.3.4)|
          Length = 826

 Score = 33.1 bits (74), Expect = 0.85
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = -3

Query: 542 MDCEGCERRVKNAVKSIRGVTSVAVN--PKMSKVTVTGHVEPRKVLERVKSTG 390
           M C  C RRV+ A+ ++ GV S  VN   + + V  TG  +   VL  ++  G
Sbjct: 24  MTCASCVRRVEKAISAVPGVASATVNLATERASVQFTGAPDTGGVLLAIEKAG 76

>ATZN_SYNY3 (Q59998) Zinc-transporting ATPase (EC 3.6.3.5)|
           (Zn(2+)-translocating P-type ATPase)
          Length = 721

 Score = 33.1 bits (74), Expect = 0.85
 Identities = 16/61 (26%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
 Frame = -3

Query: 587 LRKKRPQQTVNIKVK-MDCEGCERRVKNAVKSIRGVTSVAVNPKMSKVTVTGHVEPRKVL 411
           + +  P +T  ++V  MDC  C+ +++ +++ ++GV   +V     ++TVT   +P++V 
Sbjct: 1   MTQSSPLKTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVT--YDPKQVS 58

Query: 410 E 408
           E
Sbjct: 59  E 59

>PSBB_CYAPA (P48103) Photosystem II P680 chlorophyll A apoprotein (CP-47|
           protein)
          Length = 509

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 21/74 (28%), Positives = 31/74 (41%)
 Frame = -3

Query: 422 RKVLERVKSTGKAAEMWPYVPYTLATYPYVGGAYDKKAPAGFVRSAPQAMADPAAPEIHY 243
           R+V + V +    +E W  +P  LA Y Y+G   +  A  G  R+ P    D  A     
Sbjct: 286 RRVQKDVAAGASLSEAWNRIPAKLAFYDYIG---NNPAKGGLFRAGPMNKGDGIAESWLG 342

Query: 242 MNMFNDEDVNACTV 201
              F D++    TV
Sbjct: 343 HATFKDKEGRELTV 356

>RL31_CYAPA (Q9XGL4) 60S ribosomal protein L31|
          Length = 119

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 9/98 (9%)
 Frame = -3

Query: 608 ETKESLKLRKKRPQQTVNIKVKMDCEGCERRVKNAVKSIR-------GVTSVAVNPKMSK 450
           E K+S        + T+N+  ++   G ++R   AVK I+       G T V V+P+++K
Sbjct: 5   ENKKSRAAEIVTREYTINLHKRLHGVGFKKRAPRAVKEIKKFASKIMGTTDVRVDPRLNK 64

Query: 449 VTVTGHVE--PRKVLERVKSTGKAAEMWPYVPYTLATY 342
                 +   P +V  R+       E      YTL TY
Sbjct: 65  FVWNQGIRSVPYRVRVRLARKRNDDEDAKEKLYTLVTY 102

>MERA_THIFE (P17239) Mercuric reductase (EC 1.16.1.1) (Hg(II) reductase)|
          Length = 547

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
 Frame = -3

Query: 542 MDCEGCERRVKNAVKSIRGVTSVAVN--PKMSKVTVTGHVEPRKVLERVKSTG 390
           M C+GC   V+ A++ + GV    V+     ++V + G V  +++++ V ++G
Sbjct: 14  MTCDGCAAHVRKALEGVPGVREAQVSYPDATARVVLEGEVPMQRLIKAVVASG 66

>MERA_SHEPU (Q54465) Mercuric reductase (EC 1.16.1.1) (Hg(II) reductase)|
          Length = 557

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
 Frame = -3

Query: 542 MDCEGCERRVKNAVKSIRGVTSVAVNPKMSKVTVT--GHVEPRKVLERVKSTGKAAE 378
           M C  C   VK A+ +I GV  V ++ + ++ T+T  G V    ++  +++ G  A+
Sbjct: 9   MTCPSCVAHVKEALDAIEGVNKVEISYENARATITTNGGVSVTVLIGAIEALGYIAK 65

>CADA1_LISMO (P58414) Probable cadmium-transporting ATPase (EC 3.6.3.3) (Cadmium|
           efflux ATPase)
          Length = 707

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = -3

Query: 578 KRPQQTVNIKVKMDCEGCERRVKNAVKSIRGVTSVAVNPKMSKVTVTG 435
           K  +QT      M C  C  + +  VK++ GVT   VN    K++V G
Sbjct: 3   KASKQTTYRVDGMSCTNCAGKFEKNVKNLEGVTDAKVNFGAGKISVYG 50

>CO4A1_CAEEL (P17139) Collagen alpha-1(IV) chain precursor|
          Length = 1759

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 21/50 (42%), Positives = 25/50 (50%)
 Frame = -2

Query: 648  GRLGSPL*FVQHDGDKGIPQAQEEAATADGEHQGEDGLRGLREESQERRQ 499
            G+LG+P       GD G P A  E    D  +QG DG  GLR ES +  Q
Sbjct: 1203 GQLGTP-------GDVGYPGAPGE--NGDNGNQGRDGQPGLRGESGQPGQ 1243

>PSBB_ODOSI (P49471) Photosystem II P680 chlorophyll A apoprotein (CP-47|
           protein)
          Length = 509

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 21/74 (28%), Positives = 30/74 (40%)
 Frame = -3

Query: 422 RKVLERVKSTGKAAEMWPYVPYTLATYPYVGGAYDKKAPAGFVRSAPQAMADPAAPEIHY 243
           R+V   V      ++ W  +P  LA Y Y+G   +  A  G  R+ P    D  A     
Sbjct: 286 RQVETSVSEGLSESQAWSRIPDKLAFYDYIG---NNPAKGGLFRAGPMNKGDGIAEAWLG 342

Query: 242 MNMFNDEDVNACTV 201
             +F D+D    TV
Sbjct: 343 HPIFRDKDGRELTV 356

>ASSY_METCA (Q609X7) Argininosuccinate synthase (EC 6.3.4.5)|
           (Citrulline--aspartate ligase)
          Length = 408

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = -3

Query: 455 SKVTVTGHVEPRKVLERVKSTGKAAEMWPYVPYTLATYPYVGGAYDKKAPAGFVR 291
           S+ TV G V  +     V   G+ +E        +AT+    GAYD+K   GF++
Sbjct: 337 SQATVNGVVRVKLYKGNVSVVGRKSESNSLFDMNIATFEDDRGAYDQKDAEGFIK 391

>ASSY_CHRVO (Q7NWJ5) Argininosuccinate synthase (EC 6.3.4.5)|
           (Citrulline--aspartate ligase)
          Length = 408

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = -3

Query: 455 SKVTVTGHVEPRKVLERVKSTGKAAEMWPYVPYTLATYPYVGGAYDKKAPAGFVR 291
           S+ TV G V  +     V   G+ ++       T+AT+   GGAY+    AGF+R
Sbjct: 337 SQATVNGWVRLKLYKGNVIVVGRESKTDSLFDPTIATFDEDGGAYNHADAAGFIR 391

>ATOX1_CANFA (Q9TT99) Copper transport protein ATOX1 (Metal transport protein|
           ATX1)
          Length = 68

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = -3

Query: 548 VKMDCEGCERRVKNAVKSIRGVTSVAVNPKMSKVTVTGHVEPRKVLERVKSTGKA 384
           V M CEGC   V   +  + GV    ++    KV +        +LE ++ TGKA
Sbjct: 8   VDMTCEGCSNAVSRVLNKLGGV-EFDIDLPNKKVCINSEHSVDILLETLEKTGKA 61

>TOP2_TRYCR (P30190) DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II)|
          Length = 1232

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 37/131 (28%), Positives = 55/131 (41%), Gaps = 7/131 (5%)
 Frame = -3

Query: 644  ALDHLSDLCSMTETKESLKLRKKRPQQTVNIKVKMDCEGCERRVKNAVKSIRGVTSVAVN 465
            +L++L+   S TE K   KL+K  P Q    ++       E     AV +I  +    VN
Sbjct: 1066 SLENLNRKISETE-KRIDKLKKTAPVQMWLDELDRFDRAFEEHENTAVATI--LKERRVN 1122

Query: 464  PKMSKVTVTGHVEPRKVLERVKSTGKAAEMWP-------YVPYTLATYPYVGGAYDKKAP 306
            P    V+     +PR  LE VK +    +  P       YVP   +  P+VG +      
Sbjct: 1123 PPTGDVS-RNLQQPRLELEEVKVSSSGGKSVPMRVRVRKYVPPPPSKRPHVGQSVGGGGG 1181

Query: 305  AGFVRSAPQAM 273
             G VRS+  A+
Sbjct: 1182 GGSVRSSAAAV 1192

>PSBB_GUITH (O78511) Photosystem II P680 chlorophyll A apoprotein (CP-47|
           protein)
          Length = 509

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 21/74 (28%), Positives = 30/74 (40%)
 Frame = -3

Query: 422 RKVLERVKSTGKAAEMWPYVPYTLATYPYVGGAYDKKAPAGFVRSAPQAMADPAAPEIHY 243
           R+V   +      +E W  +P  LA Y YVG   +  A  G  R+ P    D  A     
Sbjct: 286 RRVENSLNEGLSLSEAWSRIPDKLAFYDYVG---NNPAKGGLFRAGPMNKGDGIAEAWLG 342

Query: 242 MNMFNDEDVNACTV 201
             +F D++    TV
Sbjct: 343 HPVFQDKEGRELTV 356

>PRP5_GIBZE (Q4IP34) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC|
           3.6.1.-)
          Length = 1227

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
 Frame = -3

Query: 638 DHLSDLCSMTETKESLKLRKKR--PQQTVNIKVKMDCEGCERRVKNAVKSIRGVTSVAVN 465
           + L+ L +  + KES   ++K   P QT N+  +MD +      K    S+  + S A  
Sbjct: 227 ERLAKLEAWKKKKESASQKQKEVNPSQTRNLLAEMDKKASGASSKTVSPSVSAIASPAAT 286

Query: 464 PKMSK--VTVTGHVEPRKVLER 405
           P +     + +G  +P+ + ++
Sbjct: 287 PTVESPAASYSGKFDPKAIAKK 308

>ULK1_HUMAN (O75385) Serine/threonine-protein kinase ULK1 (EC 2.7.11.1)|
           (Unc-51-like kinase 1)
          Length = 1050

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
 Frame = +2

Query: 242 CSGSQAPRGR--PWPAVRCGRSPPVP 313
           CS S +P GR  P+ + RCG S P+P
Sbjct: 408 CSSSPSPSGRAGPFSSSRCGASVPIP 433


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,908,950
Number of Sequences: 219361
Number of extensions: 1765734
Number of successful extensions: 6045
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 5763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6040
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7139613222
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)