ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd24b15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_193473.1| Oryza sativa (japonica cultivar-group), predic... 113 5e-22
2gb|AF489111.1| Oryza sativa putative Ca2+/H+ exchanger mRNA, com... 113 5e-22
3dbj|AB112656.1| Oryza sativa (japonica cultivar-group) OsCAX1a m... 113 5e-22
4dbj|AK100765.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 5e-22
5gb|AY108295.1| Zea mays PCO087284 mRNA sequence 101 2e-18
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 74 4e-10
7dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic D... 74 4e-10
8dbj|AP003372.2| Oryza sativa (japonica cultivar-group) genomic D... 74 4e-10
9gb|AF256229.1|AF256229 Zea mays calcium/proton exchanger CAX1-li... 52 0.002
10gb|AY133219.1| Oryza latifolia clone 78-2 pangrangja MITE elemen... 46 0.100
11gb|AY133218.1| Oryza grandiglumis clone 77-9 pangrangja MITE ele... 46 0.100
12gb|AY133216.1| Oryza alta clone 74-2 pangrangja MITE element, pa... 46 0.100
13gb|AY133214.1| Oryza alta clone 75-8 pangrangja MITE element, pa... 46 0.100
14gb|AC090699.10| Homo sapiens chromosome 17, clone RP11-794C22, c... 46 0.100
15emb|BX936408.10| Zebrafish DNA sequence from clone CH211-195A15 ... 44 0.39
16gb|AC133078.3| Mus musculus BAC clone RP24-444O21 from chromosom... 44 0.39
17gb|AC123028.4| Mus musculus BAC clone RP24-553H21 from chromosom... 44 0.39
18gb|AY112735.1| Bean common mosaic virus strain NL1, complete genome 44 0.39
19gb|DQ054364.1|DQ054364S1 Bean common mosaic virus polyprotein pr... 44 0.39
20dbj|AB112770.1| Oryza sativa (japonica cultivar-group) OsCAX1b m... 44 0.39
21dbj|AK072134.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.39
22dbj|AK069021.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.39
23gb|AC149215.3| Mus musculus BAC clone RP24-201G21 from chromosom... 42 1.6
24gb|AC155823.8| Mus musculus BAC clone RP23-348C5 from chromosome... 42 1.6
25ref|XM_965355.1| PREDICTED: Tribolium castaneum similar to CG352... 42 1.6
26gb|U32996.1|HSMAP19 Human microtuble-associated protein-2 (MAP-2... 42 1.6
27dbj|AK142691.1| Mus musculus 16 days neonate heart cDNA, RIKEN f... 42 1.6
28gb|AC004398.1|AC004398 Homo sapiens Cosmid g5129z190, complete s... 42 1.6
29dbj|AP006428.1| Lotus japonicus genomic DNA, chromosome 5, clone... 42 1.6
30emb|AL671338.15| Mouse DNA sequence from clone RP23-113J9 on chr... 42 1.6
31gb|AC136217.4| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
32ref|XM_639626.1| Dictyostelium discoideum hypothetical protein (... 40 6.1
33ref|XM_639440.1| Dictyostelium discoideum hypothetical protein (... 40 6.1
34ref|XM_513484.1| PREDICTED: Pan troglodytes similar to dJ677H15.... 40 6.1
35ref|NM_004768.2| Homo sapiens splicing factor, arginine/serine-r... 40 6.1
36gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 40 6.1
37gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete... 40 6.1
38gb|BC040436.1| Homo sapiens splicing factor, arginine/serine-ric... 40 6.1
39gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome 40 6.1
40ref|XM_596187.2| PREDICTED: Bos taurus similar to NM23-H8 (LOC51... 40 6.1
41ref|XM_872994.1| PREDICTED: Bos taurus similar to splicing facto... 40 6.1
42ref|XM_872908.1| PREDICTED: Bos taurus similar to splicing facto... 40 6.1
43ref|XM_872806.1| PREDICTED: Bos taurus similar to splicing facto... 40 6.1
44ref|XM_872718.1| PREDICTED: Bos taurus similar to splicing facto... 40 6.1
45ref|XM_591132.2| PREDICTED: Bos taurus similar to splicing facto... 40 6.1
46ref|XM_872510.1| PREDICTED: Bos taurus similar to splicing facto... 40 6.1
47ref|XM_872407.1| PREDICTED: Bos taurus similar to splicing facto... 40 6.1
48ref|XM_872310.1| PREDICTED: Bos taurus similar to splicing facto... 40 6.1
49ref|XM_872193.1| PREDICTED: Bos taurus similar to splicing facto... 40 6.1
50ref|XM_864072.1| PREDICTED: Bos taurus similar to splicing facto... 40 6.1
51emb|CR853302.11| Zebrafish DNA sequence from clone DKEY-91M3 in ... 40 6.1
52gb|AC114817.3| Mus musculus BAC clone RP23-28O15 from 14, comple... 40 6.1
53ref|XM_721459.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 6.1
54gb|CP000001.1| Bacillus cereus E33L, complete genome 40 6.1
55gb|BC017359.2| Homo sapiens splicing factor, arginine/serine-ric... 40 6.1
56gb|BC002784.2| Homo sapiens splicing factor, arginine/serine-ric... 40 6.1
57emb|CR762396.8| Zebrafish DNA sequence from clone DKEY-262O12 in... 40 6.1
58emb|AL353771.8| Human DNA sequence from clone RP4-677H15 on chro... 40 6.1
59emb|BX640645.1|HSM806696 Homo sapiens mRNA; cDNA DKFZp686P22142 ... 40 6.1
60gb|AC130727.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
61emb|CR614713.1| full-length cDNA clone CS0DM004YH12 of Fetal liv... 40 6.1
62gb|AC091976.2| Homo sapiens chromosome 5 clone RP11-528F16, comp... 40 6.1
63gb|AC008428.5| Homo sapiens chromosome 5 clone CTC-308D9, comple... 40 6.1
64gb|BC110179.1| Bos taurus cDNA clone MGC:133838 IMAGE:8059306, c... 40 6.1
65dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
66gb|AC116984.2| Dictyostelium discoideum chromosome 2 map 2567470... 40 6.1
67emb|BX641004.1|HSM807168 Homo sapiens mRNA; cDNA DKFZp686D02116 ... 40 6.1
68emb|BX571817.14| Zebrafish DNA sequence from clone DKEY-287H13 i... 40 6.1
69emb|BX294670.6| Zebrafish DNA sequence from clone CH211-154O6 in... 40 6.1
70emb|CR391947.13| Zebrafish DNA sequence from clone DKEYP-88A4 in... 40 6.1
71gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 40 6.1
72gb|AE016879.1| Bacillus anthracis str. Ames, complete genome 40 6.1
73gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome 40 6.1
74emb|AL772403.11| Mouse DNA sequence from clone RP23-458E2 on chr... 40 6.1
75gb|U34972.1|PSU34972 Peanut stripe virus mRNA polyprotein mRNA, ... 40 6.1
76dbj|AP004484.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 6.1
77gb|U05771.1|PSU05771 Peanut stripe virus, complete genome 40 6.1
78emb|AL928801.6| Mouse DNA sequence from clone RP23-116P4 on chro... 40 6.1
79emb|AL832279.1|HSM803586 Homo sapiens mRNA; cDNA DKFZp667E0418 (... 40 6.1
80gb|M74002.1|HUMARGNP Human arginine-rich nuclear protein mRNA, c... 40 6.1 
>ref|NM_193473.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1275

 Score =  113 bits (57), Expect = 5e-22
 Identities = 100/113 (88%), Gaps = 1/113 (0%)
 Strand = Plus / Minus

                                                                        
Query: 341  gcgccgataacaatgtagcataggaggaggaggactcccttgaggtaatgtgacgttcca 400
            |||||||| ||||||||||| ||||||||||| |  ||||| ||||||||||| ||||||
Sbjct: 1178 gcgccgatgacaatgtagcacaggaggaggagaatccccttcaggtaatgtgatgttcca 1119

                                                                 
Query: 401  tcctggagggtgaaggccgtcactagcacccgagatgaagagagagccggtct 453
            ||||| ||||||||||||||||| |||| |||  ||||| |||||||||||||
Sbjct: 1118 tcctgcagggtgaaggccgtcaccagca-ccgccatgaacagagagccggtct 1067
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>gb|AF489111.1| Oryza sativa putative Ca2+/H+ exchanger mRNA, complete cds
          Length = 1065

 Score =  113 bits (57), Expect = 5e-22
 Identities = 100/113 (88%), Gaps = 1/113 (0%)
 Strand = Plus / Minus

                                                                       
Query: 341 gcgccgataacaatgtagcataggaggaggaggactcccttgaggtaatgtgacgttcca 400
           |||||||| ||||||||||| ||||||||||| |  ||||| ||||||||||| ||||||
Sbjct: 929 gcgccgatgacaatgtagcacaggaggaggagaatccccttcaggtaatgtgatgttcca 870

                                                                
Query: 401 tcctggagggtgaaggccgtcactagcacccgagatgaagagagagccggtct 453
           ||||| ||||||||||||||||| |||| |||  ||||| |||||||||||||
Sbjct: 869 tcctgcagggtgaaggccgtcaccagca-ccgccatgaacagagagccggtct 818
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>dbj|AB112656.1| Oryza sativa (japonica cultivar-group) OsCAX1a mRNA for cation/proton
            exchanger 1a, complete cds
          Length = 1895

 Score =  113 bits (57), Expect = 5e-22
 Identities = 100/113 (88%), Gaps = 1/113 (0%)
 Strand = Plus / Minus

                                                                        
Query: 341  gcgccgataacaatgtagcataggaggaggaggactcccttgaggtaatgtgacgttcca 400
            |||||||| ||||||||||| ||||||||||| |  ||||| ||||||||||| ||||||
Sbjct: 1460 gcgccgatgacaatgtagcacaggaggaggagaatccccttcaggtaatgtgatgttcca 1401

                                                                 
Query: 401  tcctggagggtgaaggccgtcactagcacccgagatgaagagagagccggtct 453
            ||||| ||||||||||||||||| |||| |||  ||||| |||||||||||||
Sbjct: 1400 tcctgcagggtgaaggccgtcaccagca-ccgccatgaacagagagccggtct 1349
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>dbj|AK100765.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023119J24, full
            insert sequence
          Length = 1962

 Score =  113 bits (57), Expect = 5e-22
 Identities = 100/113 (88%), Gaps = 1/113 (0%)
 Strand = Plus / Minus

                                                                        
Query: 341  gcgccgataacaatgtagcataggaggaggaggactcccttgaggtaatgtgacgttcca 400
            |||||||| ||||||||||| ||||||||||| |  ||||| ||||||||||| ||||||
Sbjct: 1450 gcgccgatgacaatgtagcacaggaggaggagaatccccttcaggtaatgtgatgttcca 1391

                                                                 
Query: 401  tcctggagggtgaaggccgtcactagcacccgagatgaagagagagccggtct 453
            ||||| ||||||||||||||||| |||| |||  ||||| |||||||||||||
Sbjct: 1390 tcctgcagggtgaaggccgtcaccagca-ccgccatgaacagagagccggtct 1339
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>gb|AY108295.1| Zea mays PCO087284 mRNA sequence
          Length = 1825

 Score =  101 bits (51), Expect = 2e-18
 Identities = 112/131 (85%), Gaps = 1/131 (0%)
 Strand = Plus / Minus

                                                                        
Query: 323  ctcgtaacaaagaagcaagcgccgataacaatgtagcataggaggaggaggactcccttg 382
            ||||||||||||||||| || ||||| ||||||||||| || || || ||||  ||||||
Sbjct: 1410 ctcgtaacaaagaagcatgcaccgatcacaatgtagcacagcagcagaaggatccccttg 1351

                                                                        
Query: 383  aggtaatgtgacgttccatcctggagggtgaaggccgtcactagcacccgagatgaagag 442
            ||||| |||||||  ||||||||||||||||| || |||||||  | | |||| ||||||
Sbjct: 1350 aggtagtgtgacgaaccatcctggagggtgaatgctgtcactatta-ctgagacgaagag 1292

                       
Query: 443  agagccggtct 453
            |||||||||||
Sbjct: 1291 agagccggtct 1281
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                            
Query: 341      gcgccgataacaatgtagcataggaggaggaggactcccttgaggtaatgtgacgttcca 400
                |||||||| ||||||||||| ||||||||||| |  ||||| ||||||||||| ||||||
Sbjct: 21068752 gcgccgatgacaatgtagcacaggaggaggagaatccccttcaggtaatgtgatgttcca 21068811

                     
Query: 401      tcctg 405
                |||||
Sbjct: 21068812 tcctg 21068816



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 46/52 (88%), Gaps = 1/52 (1%)
 Strand = Plus / Plus

                                                                    
Query: 402      cctggagggtgaaggccgtcactagcacccgagatgaagagagagccggtct 453
                |||| ||||||||||||||||| |||| |||  ||||| |||||||||||||
Sbjct: 21068954 cctgcagggtgaaggccgtcaccagca-ccgccatgaacagagagccggtct 21069004
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>dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1144D11
          Length = 157943

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                         
Query: 341   gcgccgataacaatgtagcataggaggaggaggactcccttgaggtaatgtgacgttcca 400
             |||||||| ||||||||||| ||||||||||| |  ||||| ||||||||||| ||||||
Sbjct: 36297 gcgccgatgacaatgtagcacaggaggaggagaatccccttcaggtaatgtgatgttcca 36356

                  
Query: 401   tcctg 405
             |||||
Sbjct: 36357 tcctg 36361



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 46/52 (88%), Gaps = 1/52 (1%)
 Strand = Plus / Plus

                                                                 
Query: 402   cctggagggtgaaggccgtcactagcacccgagatgaagagagagccggtct 453
             |||| ||||||||||||||||| |||| |||  ||||| |||||||||||||
Sbjct: 36499 cctgcagggtgaaggccgtcaccagca-ccgccatgaacagagagccggtct 36549
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>dbj|AP003372.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OJ1014_G12
          Length = 158830

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                          
Query: 341    gcgccgataacaatgtagcataggaggaggaggactcccttgaggtaatgtgacgttcca 400
              |||||||| ||||||||||| ||||||||||| |  ||||| ||||||||||| ||||||
Sbjct: 131954 gcgccgatgacaatgtagcacaggaggaggagaatccccttcaggtaatgtgatgttcca 132013

                   
Query: 401    tcctg 405
              |||||
Sbjct: 132014 tcctg 132018



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 46/52 (88%), Gaps = 1/52 (1%)
 Strand = Plus / Plus

                                                                  
Query: 402    cctggagggtgaaggccgtcactagcacccgagatgaagagagagccggtct 453
              |||| ||||||||||||||||| |||| |||  ||||| |||||||||||||
Sbjct: 132156 cctgcagggtgaaggccgtcaccagca-ccgccatgaacagagagccggtct 132206
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>gb|AF256229.1|AF256229 Zea mays calcium/proton exchanger CAX1-like protein mRNA, complete
            cds
          Length = 1601

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 376  tcccttgaggtaatgtgacgttccatcctggagggtgaaggccgtcacta 425
            |||||| || |||||||| | |||||||||||| ||||||||||| ||||
Sbjct: 1140 tcccttcagataatgtgatgatccatcctggagcgtgaaggccgttacta 1091
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>gb|AY133219.1| Oryza latifolia clone 78-2 pangrangja MITE element, partial
           sequence
          Length = 458

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 113 tgcttttctcgcaacagtaatca 135
           |||||||||||||||||||||||
Sbjct: 274 tgcttttctcgcaacagtaatca 252
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>gb|AY133218.1| Oryza grandiglumis clone 77-9 pangrangja MITE element, partial
           sequence
          Length = 458

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 113 tgcttttctcgcaacagtaatca 135
           |||||||||||||||||||||||
Sbjct: 274 tgcttttctcgcaacagtaatca 252
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>gb|AY133216.1| Oryza alta clone 74-2 pangrangja MITE element, partial sequence
          Length = 458

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 113 tgcttttctcgcaacagtaatca 135
           |||||||||||||||||||||||
Sbjct: 274 tgcttttctcgcaacagtaatca 252
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>gb|AY133214.1| Oryza alta clone 75-8 pangrangja MITE element, partial sequence
          Length = 458

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 113 tgcttttctcgcaacagtaatca 135
           |||||||||||||||||||||||
Sbjct: 274 tgcttttctcgcaacagtaatca 252
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>gb|AC090699.10| Homo sapiens chromosome 17, clone RP11-794C22, complete sequence
          Length = 138379

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 78     tcaagaaaataaagaaaaaatctggta 104
              ||||||||| |||||||||||||||||
Sbjct: 123732 tcaagaaaaaaaagaaaaaatctggta 123706
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>emb|BX936408.10| Zebrafish DNA sequence from clone CH211-195A15 in linkage group 17,
             complete sequence
          Length = 198387

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 312   gttctgtttgtctcgtaacaaagaag 337
             ||||||||||||| ||||||||||||
Sbjct: 99432 gttctgtttgtcttgtaacaaagaag 99407
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>gb|AC133078.3| Mus musculus BAC clone RP24-444O21 from chromosome 10, complete sequence
          Length = 141420

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 83     aaaataaagaaaaaatctggta 104
              ||||||||||||||||||||||
Sbjct: 102767 aaaataaagaaaaaatctggta 102746
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>gb|AC123028.4| Mus musculus BAC clone RP24-553H21 from chromosome 10, complete sequence
          Length = 175143

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 83     aaaataaagaaaaaatctggta 104
              ||||||||||||||||||||||
Sbjct: 130799 aaaataaagaaaaaatctggta 130820
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>gb|AY112735.1| Bean common mosaic virus strain NL1, complete genome
          Length = 10054

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 133  tcagttatgcacatatatgata 154
            ||||||||||||||||||||||
Sbjct: 3723 tcagttatgcacatatatgata 3744
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>gb|DQ054364.1|DQ054364S1 Bean common mosaic virus polyprotein precursor, gene, partial cds
          Length = 4537

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 133  tcagttatgcacatatatgata 154
            ||||||||||||||||||||||
Sbjct: 3077 tcagttatgcacatatatgata 3098
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>dbj|AB112770.1| Oryza sativa (japonica cultivar-group) OsCAX1b mRNA for cation/proton
            exchanger 1b, complet cds
          Length = 1848

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 376  tcccttgaggtaatgtgacgttccatcctggagggtgaaggccgtcacta 425
            |||||| || ||||||||   ||| ||||||||||||||||| |||||||
Sbjct: 1265 tcccttcagataatgtgattctccctcctggagggtgaaggctgtcacta 1216
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>dbj|AK072134.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129P04, full
            insert sequence
          Length = 1925

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 376  tcccttgaggtaatgtgacgttccatcctggagggtgaaggccgtcacta 425
            |||||| || ||||||||   ||| ||||||||||||||||| |||||||
Sbjct: 1328 tcccttcagataatgtgattctccctcctggagggtgaaggctgtcacta 1279
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>dbj|AK069021.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170B16, full
            insert sequence
          Length = 2369

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 376  tcccttgaggtaatgtgacgttccatcctggagggtgaaggccgtcacta 425
            |||||| || ||||||||   ||| ||||||||||||||||| |||||||
Sbjct: 1772 tcccttcagataatgtgattctccctcctggagggtgaaggctgtcacta 1723
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>gb|AC149215.3| Mus musculus BAC clone RP24-201G21 from chromosome 7, complete sequence
          Length = 174164

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 81    agaaaataaagaaaaaatctg 101
             |||||||||||||||||||||
Sbjct: 84572 agaaaataaagaaaaaatctg 84592
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>gb|AC155823.8| Mus musculus BAC clone RP23-348C5 from chromosome 8, complete sequence
          Length = 219597

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 362    aggaggaggaggactcccttg 382
              |||||||||||||||||||||
Sbjct: 152563 aggaggaggaggactcccttg 152583
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>ref|XM_965355.1| PREDICTED: Tribolium castaneum similar to CG3523-PA (LOC659016), mRNA
          Length = 6468

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 79   caagaaaataaagaaaaaatc 99
            |||||||||||||||||||||
Sbjct: 6118 caagaaaataaagaaaaaatc 6138
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>gb|U32996.1|HSMAP19 Human microtuble-associated protein-2 (MAP-2) gene, exon 19
          Length = 3814

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 80   aagaaaataaagaaaaaatct 100
            |||||||||||||||||||||
Sbjct: 1449 aagaaaataaagaaaaaatct 1429
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>dbj|AK142691.1| Mus musculus 16 days neonate heart cDNA, RIKEN full-length enriched
           library, clone:D830006E18 product:unclassifiable, full
           insert sequence
          Length = 3310

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 130 taatcagttatgcacatatat 150
           |||||||||||||||||||||
Sbjct: 677 taatcagttatgcacatatat 657
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>gb|AC004398.1|AC004398 Homo sapiens Cosmid g5129z190, complete sequence
          Length = 42304

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 78    tcaagaaaataaagaaaaaat 98
             |||||||||||||||||||||
Sbjct: 13445 tcaagaaaataaagaaaaaat 13425
to top
>dbj|AP006428.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT04J15, TM0321,
              complete sequence
          Length = 127049

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 106    aattgcatgcttttctcgcaa 126
              |||||||||||||||||||||
Sbjct: 100305 aattgcatgcttttctcgcaa 100325
to top
>emb|AL671338.15| Mouse DNA sequence from clone RP23-113J9 on chromosome 4, complete
              sequence
          Length = 172327

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 130    taatcagttatgcacatatat 150
              |||||||||||||||||||||
Sbjct: 152433 taatcagttatgcacatatat 152453
to top
>gb|AC136217.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0030I14, complete sequence
          Length = 159035

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 402   cctggagggtgaaggccgtcacta 425
             |||||||||||||||| |||||||
Sbjct: 17255 cctggagggtgaaggctgtcacta 17278
to top
>ref|XM_639626.1| Dictyostelium discoideum hypothetical protein (DDB0168059), partial
            mRNA
          Length = 6147

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 75   ggttcaagaaaataaagaaa 94
            ||||||||||||||||||||
Sbjct: 6063 ggttcaagaaaataaagaaa 6082
to top
>ref|XM_639440.1| Dictyostelium discoideum hypothetical protein (DDB0217329), partial
            mRNA
          Length = 6147

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 75   ggttcaagaaaataaagaaa 94
            ||||||||||||||||||||
Sbjct: 6063 ggttcaagaaaataaagaaa 6082
to top
>ref|XM_513484.1| PREDICTED: Pan troglodytes similar to dJ677H15.2 (splicing factor,
            arginine/serine-rich 11) (LOC456937), mRNA
          Length = 1961

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 361  taggaggaggaggactccct 380
            ||||||||||||||||||||
Sbjct: 981  taggaggaggaggactccct 1000
to top
>ref|NM_004768.2| Homo sapiens splicing factor, arginine/serine-rich 11 (SFRS11),
           mRNA
          Length = 2775

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 361 taggaggaggaggactccct 380
           ||||||||||||||||||||
Sbjct: 889 taggaggaggaggactccct 908
to top
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 79      caagaaaataaagaaaaaat 98
               ||||||||||||||||||||
Sbjct: 1579335 caagaaaataaagaaaaaat 1579354
to top
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 79      caagaaaataaagaaaaaat 98
               ||||||||||||||||||||
Sbjct: 1553185 caagaaaataaagaaaaaat 1553204
to top
>gb|BC040436.1| Homo sapiens splicing factor, arginine/serine-rich 11, mRNA (cDNA
           clone MGC:48837 IMAGE:5518580), complete cds
          Length = 2351

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 361 taggaggaggaggactccct 380
           ||||||||||||||||||||
Sbjct: 844 taggaggaggaggactccct 863
to top
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 79      caagaaaataaagaaaaaat 98
               ||||||||||||||||||||
Sbjct: 1553139 caagaaaataaagaaaaaat 1553158
to top
>ref|XM_596187.2| PREDICTED: Bos taurus similar to NM23-H8 (LOC518005), mRNA
          Length = 1767

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 76  gttcaagaaaataaagaaaaaatc 99
           |||||||||| |||||||||||||
Sbjct: 508 gttcaagaaattaaagaaaaaatc 531
to top
>ref|XM_872994.1| PREDICTED: Bos taurus similar to splicing factor p54, transcript
           variant 16 (LOC513451), mRNA
          Length = 4197

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 361 taggaggaggaggactccct 380
           ||||||||||||||||||||
Sbjct: 916 taggaggaggaggactccct 935
to top
>ref|XM_872908.1| PREDICTED: Bos taurus similar to splicing factor p54, transcript
            variant 15 (LOC513451), mRNA
          Length = 4290

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 361  taggaggaggaggactccct 380
            ||||||||||||||||||||
Sbjct: 985  taggaggaggaggactccct 1004
to top
>ref|XM_872806.1| PREDICTED: Bos taurus similar to splicing factor p54, transcript
           variant 14 (LOC513451), mRNA
          Length = 4137

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 361 taggaggaggaggactccct 380
           ||||||||||||||||||||
Sbjct: 916 taggaggaggaggactccct 935
to top
>ref|XM_872718.1| PREDICTED: Bos taurus similar to splicing factor p54, transcript
            variant 13 (LOC513451), mRNA
          Length = 4909

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 361  taggaggaggaggactccct 380
            ||||||||||||||||||||
Sbjct: 1625 taggaggaggaggactccct 1644
to top
>ref|XM_591132.2| PREDICTED: Bos taurus similar to splicing factor p54, transcript
           variant 1 (LOC513451), mRNA
          Length = 4188

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 361 taggaggaggaggactccct 380
           ||||||||||||||||||||
Sbjct: 919 taggaggaggaggactccct 938
to top
>ref|XM_872510.1| PREDICTED: Bos taurus similar to splicing factor p54, transcript
            variant 12 (LOC513451), mRNA
          Length = 5386

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 361  taggaggaggaggactccct 380
            ||||||||||||||||||||
Sbjct: 2102 taggaggaggaggactccct 2121
to top
>ref|XM_872407.1| PREDICTED: Bos taurus similar to splicing factor p54, transcript
           variant 11 (LOC513451), mRNA
          Length = 3902

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 361 taggaggaggaggactccct 380
           ||||||||||||||||||||
Sbjct: 618 taggaggaggaggactccct 637
to top
>ref|XM_872310.1| PREDICTED: Bos taurus similar to splicing factor p54, transcript
           variant 10 (LOC513451), mRNA
          Length = 3864

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 361 taggaggaggaggactccct 380
           ||||||||||||||||||||
Sbjct: 916 taggaggaggaggactccct 935
to top
>ref|XM_872193.1| PREDICTED: Bos taurus similar to splicing factor p54, transcript
            variant 9 (LOC513451), mRNA
          Length = 5680

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 361  taggaggaggaggactccct 380
            ||||||||||||||||||||
Sbjct: 2396 taggaggaggaggactccct 2415
to top
>ref|XM_864072.1| PREDICTED: Bos taurus similar to splicing factor p54, transcript
           variant 2 (LOC513451), mRNA
          Length = 1268

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 361 taggaggaggaggactccct 380
           ||||||||||||||||||||
Sbjct: 916 taggaggaggaggactccct 935
to top
>emb|CR853302.11| Zebrafish DNA sequence from clone DKEY-91M3 in linkage group 11,
             complete sequence
          Length = 231837

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    aagaaaataaagaaaaaatc 99
             ||||||||||||||||||||
Sbjct: 21240 aagaaaataaagaaaaaatc 21221
to top
>gb|AC114817.3| Mus musculus BAC clone RP23-28O15 from 14, complete sequence
          Length = 211624

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 83     aaaataaagaaaaaatctggtaca 106
              ||||||||||||||| ||||||||
Sbjct: 146094 aaaataaagaaaaaacctggtaca 146071
to top
>ref|XM_721459.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein
          (PY05985) partial mRNA
          Length = 586

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 78 tcaagaaaataaagaaaaaa 97
          ||||||||||||||||||||
Sbjct: 54 tcaagaaaataaagaaaaaa 73
to top
>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 79      caagaaaataaagaaaaaat 98
               ||||||||||||||||||||
Sbjct: 1577951 caagaaaataaagaaaaaat 1577970
to top
>gb|BC017359.2| Homo sapiens splicing factor, arginine/serine-rich 11, mRNA (cDNA
            clone IMAGE:5092873), partial cds
          Length = 1423

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 361  taggaggaggaggactccct 380
            ||||||||||||||||||||
Sbjct: 1006 taggaggaggaggactccct 1025
to top
>gb|BC002784.2| Homo sapiens splicing factor, arginine/serine-rich 11, mRNA (cDNA
           clone IMAGE:3615263), partial cds
          Length = 1098

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 361 taggaggaggaggactccct 380
           ||||||||||||||||||||
Sbjct: 900 taggaggaggaggactccct 919
to top
>emb|CR762396.8| Zebrafish DNA sequence from clone DKEY-262O12 in linkage group 1,
              complete sequence
          Length = 163635

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 93     aaaaatctggtacaattgcatgct 116
              ||||||||||||||||| ||||||
Sbjct: 124764 aaaaatctggtacaatttcatgct 124741
to top
>emb|AL353771.8| Human DNA sequence from clone RP4-677H15 on chromosome 1p31.3-32.3
             Contains gene FLJ20331, two novel genes, the SFRS11 gene
             for arginine/serine-rich 11 splicing factor and the 3' end
             of gene DKFZP566D1346, complete sequence
          Length = 131612

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 361   taggaggaggaggactccct 380
             ||||||||||||||||||||
Sbjct: 97842 taggaggaggaggactccct 97861
to top
>emb|BX640645.1|HSM806696 Homo sapiens mRNA; cDNA DKFZp686P22142 (from clone DKFZp686P22142)
          Length = 4093

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 361  taggaggaggaggactccct 380
            ||||||||||||||||||||
Sbjct: 2126 taggaggaggaggactccct 2145
to top
>gb|AC130727.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560F03,
             complete sequence
          Length = 45160

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 402   cctggagggtgaaggccgtcacta 425
             |||||||||||||||| |||||||
Sbjct: 24035 cctggagggtgaaggctgtcacta 24012
to top
>emb|CR614713.1| full-length cDNA clone CS0DM004YH12 of Fetal liver of Homo sapiens
           (human)
          Length = 2121

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 361 taggaggaggaggactccct 380
           ||||||||||||||||||||
Sbjct: 258 taggaggaggaggactccct 277
to top
>gb|AC091976.2| Homo sapiens chromosome 5 clone RP11-528F16, complete sequence
          Length = 175529

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    caagaaaataaagaaaaaat 98
             ||||||||||||||||||||
Sbjct: 46210 caagaaaataaagaaaaaat 46191
to top
>gb|AC008428.5| Homo sapiens chromosome 5 clone CTC-308D9, complete sequence
          Length = 148069

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 79   caagaaaataaagaaaaaat 98
            ||||||||||||||||||||
Sbjct: 6620 caagaaaataaagaaaaaat 6639
to top
>gb|BC110179.1| Bos taurus cDNA clone MGC:133838 IMAGE:8059306, complete cds
          Length = 1475

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 76  gttcaagaaaataaagaaaaaatc 99
           |||||||||| |||||||||||||
Sbjct: 610 gttcaagaaattaaagaaaaaatc 633
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 402      cctggagggtgaaggccgtcacta 425
                |||||||||||||||| |||||||
Sbjct: 29369230 cctggagggtgaaggctgtcacta 29369253
to top
>gb|AC116984.2| Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4,
              complete sequence
          Length = 541399

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     ggttcaagaaaataaagaaa 94
              ||||||||||||||||||||
Sbjct: 311782 ggttcaagaaaataaagaaa 311801
to top
>emb|BX641004.1|HSM807168 Homo sapiens mRNA; cDNA DKFZp686D02116 (from clone DKFZp686D02116)
          Length = 3272

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 361 taggaggaggaggactccct 380
           ||||||||||||||||||||
Sbjct: 309 taggaggaggaggactccct 328
to top
>emb|BX571817.14| Zebrafish DNA sequence from clone DKEY-287H13 in linkage group 18,
              complete sequence
          Length = 167381

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    gtaatcagttatgcacatat 148
              ||||||||||||||||||||
Sbjct: 160985 gtaatcagttatgcacatat 161004
to top
>emb|BX294670.6| Zebrafish DNA sequence from clone CH211-154O6 in linkage group 16,
             complete sequence
          Length = 199070

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    aaataaagaaaaaatctggt 103
             ||||||||||||||||||||
Sbjct: 58106 aaataaagaaaaaatctggt 58087
to top
>emb|CR391947.13| Zebrafish DNA sequence from clone DKEYP-88A4 in linkage group 1, complete
              sequence
          Length = 167207

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 93     aaaaatctggtacaattgcatgct 116
              ||||||||||||||||| ||||||
Sbjct: 144049 aaaaatctggtacaatttcatgct 144026
to top
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 79      caagaaaataaagaaaaaat 98
               ||||||||||||||||||||
Sbjct: 1570554 caagaaaataaagaaaaaat 1570573
to top
>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 79      caagaaaataaagaaaaaat 98
               ||||||||||||||||||||
Sbjct: 1553062 caagaaaataaagaaaaaat 1553081
to top
>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 79      caagaaaataaagaaaaaat 98
               ||||||||||||||||||||
Sbjct: 1678918 caagaaaataaagaaaaaat 1678937
to top
>emb|AL772403.11| Mouse DNA sequence from clone RP23-458E2 on chromosome 4, complete
             sequence
          Length = 108612

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 79    caagaaaataaagaaaaaat 98
             ||||||||||||||||||||
Sbjct: 73584 caagaaaataaagaaaaaat 73603
to top
>gb|U34972.1|PSU34972 Peanut stripe virus mRNA polyprotein mRNA, complete cds
          Length = 10086

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 131  aatcagttatgcacatatatgata 154
            ||||||||||| ||||||||||||
Sbjct: 3723 aatcagttatgtacatatatgata 3746
to top
>dbj|AP004484.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT06I17, TM0017,
             complete sequence
          Length = 121127

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    agaaaataaagaaaaaatct 100
             ||||||||||||||||||||
Sbjct: 27022 agaaaataaagaaaaaatct 27041
to top
>gb|U05771.1|PSU05771 Peanut stripe virus, complete genome
          Length = 10056

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 131  aatcagttatgcacatatatgata 154
            ||||||||||| ||||||||||||
Sbjct: 3723 aatcagttatgtacatatatgata 3746
to top
>emb|AL928801.6| Mouse DNA sequence from clone RP23-116P4 on chromosome 2, complete
             sequence
          Length = 132674

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 145   atatatgatagacacaattt 164
             ||||||||||||||||||||
Sbjct: 79993 atatatgatagacacaattt 80012
to top
>emb|AL832279.1|HSM803586 Homo sapiens mRNA; cDNA DKFZp667E0418 (from clone DKFZp667E0418)
          Length = 3075

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 361  taggaggaggaggactccct 380
            ||||||||||||||||||||
Sbjct: 1148 taggaggaggaggactccct 1167
to top
>gb|M74002.1|HUMARGNP Human arginine-rich nuclear protein mRNA, complete cds
          Length = 2736

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 361 taggaggaggaggactccct 380
           ||||||||||||||||||||
Sbjct: 848 taggaggaggaggactccct 867


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,623,722
Number of Sequences: 3902068
Number of extensions: 4623722
Number of successful extensions: 105272
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104801
Number of HSP's gapped (non-prelim): 463
length of query: 456
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 434
effective length of database: 17,147,199,772
effective search space: 7441884701048
effective search space used: 7441884701048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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