ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd24b13 |
|---|---|
| Clone Library Name | barley_pub |
>UCRH_SOLTU (P48504) Ubiquinol-cytochrome c reductase complex 7.8 kDa protein| (EC 1.10.2.2) (Mitochondrial hinge protein) (CR7) Length = 68 Score = 112 bits (280), Expect = 2e-25 Identities = 48/68 (70%), Positives = 55/68 (80%) Frame = -1 Query: 322 ADEEPVDPKKYLEERCKPQCVKPLYEYEKCIKRVEADDTGHKHCTGQYFDYWSCIDKCVA 143 +DEE VDPK LE CKP+CV+ L EY+ C KRVE D++GHKHCTGQYFDYW CIDKCVA Sbjct: 1 SDEEVVDPKATLEVSCKPKCVRQLKEYQACTKRVEGDESGHKHCTGQYFDYWHCIDKCVA 60 Query: 142 PKLFEKLK 119 KLF+ LK Sbjct: 61 AKLFDHLK 68
>UCRH_RAT (Q5M9I5) Ubiquinol-cytochrome c reductase complex 11 kDa protein,| mitochondrial precursor (EC 1.10.2.2) (Mitochondrial hinge protein) (Cytochrome C1, nonheme 11 kDa protein) (Complex III subunit VIII) Length = 89 Score = 51.2 bits (121), Expect = 6e-07 Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 2/69 (2%) Frame = -1 Query: 319 DEEPVDPKKYLEERCKP--QCVKPLYEYEKCIKRVEADDTGHKHCTGQYFDYWSCIDKCV 146 +EE VDP + E C+ +CVK E C +RV + + CT + FD+ D CV Sbjct: 21 EEELVDPLTTVREHCEQLEKCVKARERLESCDRRVSSRSQTEEDCTEELFDFLHARDHCV 80 Query: 145 APKLFEKLK 119 A KLF+ LK Sbjct: 81 AHKLFKSLK 89
>UCRH_MOUSE (P99028) Ubiquinol-cytochrome c reductase complex 11 kDa protein,| mitochondrial precursor (EC 1.10.2.2) (Mitochondrial hinge protein) (Cytochrome C1, nonheme 11 kDa protein) (Complex III subunit VIII) Length = 89 Score = 49.7 bits (117), Expect = 2e-06 Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 2/69 (2%) Frame = -1 Query: 319 DEEPVDPKKYLEERCKP--QCVKPLYEYEKCIKRVEADDTGHKHCTGQYFDYWSCIDKCV 146 +EE VDP + E C+ +CVK E C RV + + CT + FD+ D CV Sbjct: 21 EEELVDPLTTVREHCEQLEKCVKARERLELCDNRVSSRSQTEEDCTEELFDFLHARDHCV 80 Query: 145 APKLFEKLK 119 A KLF+ LK Sbjct: 81 AHKLFKNLK 89
>UCRH_HUMAN (P07919) Ubiquinol-cytochrome c reductase complex 11 kDa protein,| mitochondrial precursor (EC 1.10.2.2) (Mitochondrial hinge protein) (Cytochrome C1, nonheme 11 kDa protein) (Complex III subunit VIII) Length = 91 Score = 49.7 bits (117), Expect = 2e-06 Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 2/69 (2%) Frame = -1 Query: 319 DEEPVDPKKYLEERCKP--QCVKPLYEYEKCIKRVEADDTGHKHCTGQYFDYWSCIDKCV 146 +EE VDP + E+C+ +CVK E C +RV + + CT + FD+ D CV Sbjct: 23 EEELVDPLTTVREQCEQLEKCVKARERLELCDERVSSRSHTEEDCTEELFDFLHARDHCV 82 Query: 145 APKLFEKLK 119 A KLF LK Sbjct: 83 AHKLFNNLK 91
>UCRH_MACFA (Q8SPH5) Ubiquinol-cytochrome c reductase complex 11 kDa protein,| mitochondrial precursor (EC 1.10.2.2) (Mitochondrial hinge protein) (Cytochrome C1, nonheme 11 kDa protein) (Complex III subunit VIII) Length = 91 Score = 48.9 bits (115), Expect = 3e-06 Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 2/69 (2%) Frame = -1 Query: 319 DEEPVDPKKYLEERCKP--QCVKPLYEYEKCIKRVEADDTGHKHCTGQYFDYWSCIDKCV 146 +EE VDP + E+C+ +CVK E C KRV + + CT + D+ D CV Sbjct: 23 EEELVDPLTTVREQCEQLEKCVKARERLELCDKRVSSRSRTEEDCTEELLDFLHARDHCV 82 Query: 145 APKLFEKLK 119 A KLF LK Sbjct: 83 AYKLFNNLK 91
>UCRH_BOVIN (P00126) Ubiquinol-cytochrome c reductase complex 11 kDa protein| (EC 1.10.2.2) (Mitochondrial hinge protein) (Cytochrome C1, nonheme 11 kDa protein) (Complex III subunit VIII) Length = 78 Score = 47.8 bits (112), Expect = 7e-06 Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 2/69 (2%) Frame = -1 Query: 319 DEEPVDPKKYLEERCKP--QCVKPLYEYEKCIKRVEADDTGHKHCTGQYFDYWSCIDKCV 146 +EE VDP + E+C+ +CVK E C +RV + + CT + D+ D CV Sbjct: 10 EEELVDPLTTVREQCEQLEKCVKARERLELCDERVSSRSQTEEDCTEELLDFLHARDHCV 69 Query: 145 APKLFEKLK 119 A KLF LK Sbjct: 70 AHKLFNSLK 78
>UCRH_YEAST (P00127) Ubiquinol-cytochrome c reductase complex 17 kDa protein| (EC 1.10.2.2) (Mitochondrial hinge protein) (Complex III polypeptide VI) Length = 147 Score = 35.0 bits (79), Expect = 0.045 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 10/77 (12%) Frame = -1 Query: 319 DEEPVDPKKYLEERCK--PQCVKPLYEYEKCIKRVEAD-------DTGHKH-CTGQYFDY 170 +EE D + L E K + ++ YE+C +RV+ D HK C ++F Sbjct: 71 EEEVTDQLEDLREHFKNTEEGKALVHHYEECAERVKIQQQQPGYADLEHKEDCVEEFFHL 130 Query: 169 WSCIDKCVAPKLFEKLK 119 +D AP+LF+KLK Sbjct: 131 QHYLDTATAPRLFDKLK 147
>SLA1_YEAST (P32790) Cytoskeleton assembly control protein SLA1| Length = 1244 Score = 31.2 bits (69), Expect = 0.65 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%) Frame = -1 Query: 349 TRSDRVIAMADEEPVD--PKKYLEERCKPQCVKPLYEYEKCIKRVEADDTGHKHCTGQYF 176 T RVI EEPV P Y+EE + V+ +Y+YE+ ++ + + T H++ F Sbjct: 43 TVKKRVIGSDSEEPVGLVPSTYIEEAPVLKKVRAIYDYEQ-VQNADEELTFHENDVFDVF 101 Query: 175 D 173 D Sbjct: 102 D 102
>CASZ1_HUMAN (Q86V15) Castor homolog 1 zinc finger protein (Castor-related| protein) Length = 1044 Score = 30.8 bits (68), Expect = 0.85 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Frame = -1 Query: 274 KPQCVKPLYEYEKCIKRVEADD-TGHKHCTGQYFDYWSCID 155 KP + + Y+K I R GH HC QY +++ C+D Sbjct: 332 KPAVTEDVNIYQKYIARFSGSQHCGHIHCAYQYREHYHCLD 372
>NDUA8_BOVIN (P42029) NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit| 8 (EC 1.6.5.3) (EC 1.6.99.3) (NADH-ubiquinone oxidoreductase 19 kDa subunit) (Complex I-19KD) (CI-19KD) (Complex I-PGIV) (CI-PGIV) Length = 171 Score = 30.8 bits (68), Expect = 0.85 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Frame = -1 Query: 313 EPVDPKKYLEE-RCKPQCVKPLYEYEKCIKRVEADDTGHKHCTGQYFDYWSCID 155 E DP++ LEE + QC E+ + IKR HC + +YW+CID Sbjct: 48 EEKDPRRCLEEGKLVNQCA---LEFFRQIKR---------HCAEPFTEYWTCID 89
>TYK2_HUMAN (P29597) Non-receptor tyrosine-protein kinase TYK2 (EC 2.7.10.2)| Length = 1187 Score = 30.4 bits (67), Expect = 1.1 Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 7/59 (11%) Frame = +1 Query: 196 ACARYHRPQLS*YISHTHTAALHTVACTAPQDTSWDQQVPHPP---W--RLRG--PSGW 351 A A Y L +SHTH A +H V P++ + V H P W R RG P W Sbjct: 652 ALAFYETASLMSQVSHTHLAFVHGVCVRGPENIMVTEYVEHGPLDVWLRRERGHVPMAW 710
>SLIK6_MOUSE (Q8C110) SLIT and NTRK-like protein 6 precursor| Length = 840 Score = 30.0 bits (66), Expect = 1.5 Identities = 12/19 (63%), Positives = 13/19 (68%) Frame = +3 Query: 180 YCPVQCLCPVSSASTLLIH 236 YCP+ C C V S S LLIH Sbjct: 327 YCPIPCNCKVLSPSGLLIH 345
>SLIK6_HUMAN (Q9H5Y7) SLIT and NTRK-like protein 6 precursor| Length = 841 Score = 30.0 bits (66), Expect = 1.5 Identities = 12/19 (63%), Positives = 13/19 (68%) Frame = +3 Query: 180 YCPVQCLCPVSSASTLLIH 236 YCP+ C C V S S LLIH Sbjct: 328 YCPIPCNCKVLSPSGLLIH 346
>SSXT_HUMAN (Q15532) SSXT protein (Synovial sarcoma, translocated to X| chromosome) (SYT protein) Length = 418 Score = 29.6 bits (65), Expect = 1.9 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%) Frame = +1 Query: 148 HIYRCMTNSQNIAQCSACARYHRPQLS*YISHTHTAALHTVACTAPQDTSWDQQVPHPPW 327 H+ +C+ +SQN + S C++Y + + HT+ L T+ A + + +P PP Sbjct: 30 HLIQCIMDSQNKGKTSECSQYQQ------MLHTNLVYLATI---ADSNQNMQSLLPAPPT 80 Query: 328 R--LRGPSG 348 + GP G Sbjct: 81 QNMPMGPGG 89
>ZNF14_MACFA (Q4R4C7) Zinc finger protein 14| Length = 642 Score = 29.3 bits (64), Expect = 2.5 Identities = 11/40 (27%), Positives = 23/40 (57%) Frame = -1 Query: 316 EEPVDPKKYLEERCKPQCVKPLYEYEKCIKRVEADDTGHK 197 ++P + ++Y ++ CK + V + Y C+++ E TG K Sbjct: 128 QKPNEYQEYEKQPCKRKAVGKTFSYRHCVRKHERTHTGGK 167
>SNF12_YEAST (P53628) Transcription regulatory protein SNF12 (SWI/SNF complex| component SWP73) Length = 566 Score = 29.3 bits (64), Expect = 2.5 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = +3 Query: 6 MKSKHSHRTIXRLVKYFNLNKVLANDQA 89 +KS SH I + KY +LN++L ND++ Sbjct: 320 LKSGTSHDAIFSIYKYIHLNELLTNDES 347
>HEMA_IAPUE (P03452) Hemagglutinin precursor [Contains: Hemagglutinin HA1| chain; Hemagglutinin HA2 chain] Length = 566 Score = 28.9 bits (63), Expect = 3.2 Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 4/53 (7%) Frame = +3 Query: 84 QAHSLKVAPQYHFSFSKSFGA----THLSMHDQ*SKYCPVQCLCPVSSASTLL 230 +A+ +AP+Y F+ S+ FG+ ++ SMH+ C +C P+ + ++ L Sbjct: 260 EANGNLIAPRYAFALSRGFGSGIITSNASMHE-----CNTKCQTPLGAINSSL 307
>L1CAM_RAT (Q05695) Neural cell adhesion molecule L1 precursor (N-CAM L1)| (Nerve-growth factor-inducible large external glycoprotein) (NILE) Length = 1259 Score = 28.9 bits (63), Expect = 3.2 Identities = 11/27 (40%), Positives = 19/27 (70%) Frame = +3 Query: 48 KYFNLNKVLANDQAHSLKVAPQYHFSF 128 K+F+L KV N + +LK++P H++F Sbjct: 660 KWFSLGKVPGNQTSTTLKLSPYVHYTF 686
>L1CAM_MOUSE (P11627) Neural cell adhesion molecule L1 precursor (N-CAM L1)| Length = 1260 Score = 28.9 bits (63), Expect = 3.2 Identities = 11/27 (40%), Positives = 19/27 (70%) Frame = +3 Query: 48 KYFNLNKVLANDQAHSLKVAPQYHFSF 128 K+F+L KV N + +LK++P H++F Sbjct: 660 KWFSLGKVPGNQTSTTLKLSPYVHYTF 686
>CAPC_BACSU (P96737) PGA biosynthesis protein capC| Length = 149 Score = 28.9 bits (63), Expect = 3.2 Identities = 16/50 (32%), Positives = 30/50 (60%) Frame = +2 Query: 179 ILPSAVLVPGIIGLNSLDTFLILIQRLYTLWLAPLLKILLGINRFLIRHG 328 I+P+ ++VPG +GL IL+ L +L ++K G+++F+I +G Sbjct: 26 IVPAGLVVPGYLGLVFNQPVFILLVLLVSLLTYVIVK--YGLSKFMILYG 73
>DCBD2_RAT (Q91ZV2) Discoidin, CUB and LCCL domain-containing protein 2| precursor (Endothelial and smooth muscle cell-derived neuropilin-like protein) Length = 769 Score = 28.5 bits (62), Expect = 4.2 Identities = 13/35 (37%), Positives = 16/35 (45%) Frame = +3 Query: 174 SKYCPVQCLCPVSSASTLLIHFSYSYSGFTHCGLH 278 SKYCP CL P + S + H S G+H Sbjct: 205 SKYCPAGCLLPFAEISGTIPHGYRDSSPLCMAGIH 239
>DCBD2_MOUSE (Q91ZV3) Discoidin, CUB and LCCL domain-containing protein 2| precursor (Endothelial and smooth muscle cell-derived neuropilin-like protein) Length = 769 Score = 28.5 bits (62), Expect = 4.2 Identities = 13/35 (37%), Positives = 16/35 (45%) Frame = +3 Query: 174 SKYCPVQCLCPVSSASTLLIHFSYSYSGFTHCGLH 278 SKYCP CL P + S + H S G+H Sbjct: 205 SKYCPAGCLLPFAEISGTIPHGYRDSSPLCMAGIH 239
>VATC_HORVU (Q9SCB9) Vacuolar ATP synthase subunit C (EC 3.6.3.14) (V-ATPase C| subunit) (Vacuolar proton pump C subunit) Length = 354 Score = 28.5 bits (62), Expect = 4.2 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = +2 Query: 44 RQIFQLEQGSGQ*PGSLTESSTPISFQLFKELW 142 RQI LE+ G PG+LT P+ L + +W Sbjct: 80 RQIEDLERAGGVEPGTLTVDGVPVDSYLTRFVW 112
>SKP2_HUMAN (Q13309) S-phase kinase-associated protein 2 (F-box protein Skp2)| (Cyclin A/CDK2-associated protein p45) (p45skp2) (F-box/LRR-repeat protein 1) Length = 424 Score = 28.5 bits (62), Expect = 4.2 Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Frame = -2 Query: 330 SPWRMRNLLIPRSILRSGASHSV*SRCMSMRNVSRE-LRPMIPGTSTALGN 181 SP+R++++ + S++ H + S+C ++N+S E LR P +T N Sbjct: 179 SPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKN 229
>STXB2_MOUSE (Q64324) Syntaxin-binding protein 2 (UNC-18 homolog 2) (UNC-18B)| (MUSEC1) Length = 593 Score = 28.5 bits (62), Expect = 4.2 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 13/82 (15%) Frame = +3 Query: 3 FMKSKHSH-----RTIXRLVKYFNLNKVLANDQA------HSLKVAPQYHFSFSKSFGAT 149 +++ +H H + + L+K F +K L D+A H LK PQY +K +T Sbjct: 288 WVELRHMHIADVSKKVTELLKTFCESKRLTTDKANIKDLSHILKKMPQYQKELNKY--ST 345 Query: 150 HLSMHDQ*SKYC--PVQCLCPV 209 HL + D K+ V+ LC V Sbjct: 346 HLHLADDCMKHFKGSVEKLCSV 367
>STXB2_RAT (Q62753) Syntaxin-binding protein 2 (Unc-18 homolog 2) (Unc-18B)| (Unc18-2) Length = 594 Score = 28.1 bits (61), Expect = 5.5 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 13/82 (15%) Frame = +3 Query: 3 FMKSKHSH-----RTIXRLVKYFNLNKVLANDQA------HSLKVAPQYHFSFSKSFGAT 149 +++ +H H + + L+K F +K L D+A H LK PQY +K +T Sbjct: 288 WVELRHMHIADVSKKVTELLKTFCESKRLTTDKANIKDLSHILKKMPQYQKELNKY--ST 345 Query: 150 HLSMHDQ*SKYC--PVQCLCPV 209 HL + D K+ V+ LC V Sbjct: 346 HLHLADDCMKHFKGSVEKLCGV 367
>CTL1_TORMA (Q9I9B9) Choline transporter-like protein 1| Length = 646 Score = 28.1 bits (61), Expect = 5.5 Identities = 15/35 (42%), Positives = 21/35 (60%) Frame = +2 Query: 194 VLVPGIIGLNSLDTFLILIQRLYTLWLAPLLKILL 298 VLV G +G+ L+ QR YT+W+ PL+ I L Sbjct: 541 VLVTGFVGI-----ILLNYQRDYTVWVLPLIIICL 570
>SDB84_MOUSE (Q9CQE7) Serologically defined breast cancer antigen NY-BR-84| homolog Length = 383 Score = 28.1 bits (61), Expect = 5.5 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +3 Query: 99 KVAPQYHFSFSKSFGATHLSMHD 167 KVA +HF+ KSF +H+ +HD Sbjct: 209 KVAGNFHFAPGKSFQQSHVHVHD 231
>SDB84_HUMAN (Q9Y282) Serologically defined breast cancer antigen NY-BR-84| Length = 383 Score = 28.1 bits (61), Expect = 5.5 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +3 Query: 99 KVAPQYHFSFSKSFGATHLSMHD 167 KVA +HF+ KSF +H+ +HD Sbjct: 209 KVAGNFHFAPGKSFQQSHVHVHD 231
>YL71_CAEEL (Q20624) Hypothetical protein F49E2.1 in chromosome X| Length = 600 Score = 28.1 bits (61), Expect = 5.5 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +3 Query: 198 LCPVSSASTLLIHFSYSYSGFTHCGLHRSSRYFL 299 L PV+SAS++L+H S H LH S +F+ Sbjct: 392 LTPVTSASSILVHL--PSSSLYHSHLHSSRHFFI 423
>NDUA8_HUMAN (P51970) NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit| 8 (EC 1.6.5.3) (EC 1.6.99.3) (NADH-ubiquinone oxidoreductase 19 kDa subunit) (Complex I-19KD) (CI-19KD) (Complex I-PGIV) (CI-PGIV) Length = 171 Score = 28.1 bits (61), Expect = 5.5 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Frame = -1 Query: 313 EPVDPKKYLEE-RCKPQCVKPLYEYEKCIKRVEADDTGHKHCTGQYFDYWSCID 155 E DP++ LEE + +C + K +HC + +YW+CID Sbjct: 48 EEKDPRRCLEEGKLVNKCALDFFRQIK------------RHCAEPFTEYWTCID 89
>DCBD2_HUMAN (Q96PD2) Discoidin, CUB and LCCL domain-containing protein 2| precursor (Endothelial and smooth muscle cell-derived neuropilin-like protein) (CUB, LCCL and coagulation factor V/VIII-homology domains protein 1) Length = 775 Score = 28.1 bits (61), Expect = 5.5 Identities = 13/35 (37%), Positives = 16/35 (45%) Frame = +3 Query: 174 SKYCPVQCLCPVSSASTLLIHFSYSYSGFTHCGLH 278 SKYCP CL P + S + H S G+H Sbjct: 208 SKYCPAGCLLPFAEISGTIPHGYRDSSPLCMAGVH 242
>STXB2_CANFA (Q28288) Syntaxin-binding protein 2 (Unc-18 homolog 2) (Unc-18B)| (Unc18-2) Length = 593 Score = 28.1 bits (61), Expect = 5.5 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 13/82 (15%) Frame = +3 Query: 3 FMKSKHSH-----RTIXRLVKYFNLNKVLANDQA------HSLKVAPQYHFSFSKSFGAT 149 +++ +H H + + L+K F +K L D+A H LK PQY +K +T Sbjct: 288 WVELRHMHIADVSKKVTELLKTFCESKRLTTDKANIKDLSHILKKMPQYQKELNKY--ST 345 Query: 150 HLSMHDQ*SKYC--PVQCLCPV 209 HL + D K+ V+ LC V Sbjct: 346 HLHLADDCMKHFKGSVEKLCGV 367
>OREX_HUMAN (O43612) Orexin precursor (Hypocretin) (Hcrt) [Contains: Orexin-A| (Hypocretin-1) (Hcrt1); Orexin-B (Hypocretin-2) (Hcrt2)] Length = 131 Score = 28.1 bits (61), Expect = 5.5 Identities = 15/48 (31%), Positives = 23/48 (47%) Frame = -2 Query: 309 LLIPRSILRSGASHSV*SRCMSMRNVSRELRPMIPGTSTALGNILTIG 166 LL+P ++L SGA+ C + S L ++ G ILT+G Sbjct: 20 LLLPPALLSSGAAAQPLPDCCRQKTCSCRLYELLHGAGNHAAGILTLG 67
>PAP2_HUMAN (Q9BXP8) Pappalysin-2 precursor (EC 3.4.24.-) (Pregnancy-associated| plasma protein-A2) (PAPP-A2) (Pregnancy-associated plasma protein-E1) (PAPP-E) Length = 1791 Score = 28.1 bits (61), Expect = 5.5 Identities = 18/64 (28%), Positives = 23/64 (35%), Gaps = 10/64 (15%) Frame = -1 Query: 304 DPKKYLEERCKPQCVKPLYEYE--------KCIKRVEADDTGHKHCTGQY--FDYWSCID 155 +P K + C P+C PL Y+ +C D H C FD C D Sbjct: 587 EPSKIGNDHCDPECEHPLTGYDGGDCRLQGRCYSWNRRDGLCHVECNNMLNDFDDGDCCD 646 Query: 154 KCVA 143 VA Sbjct: 647 PQVA 650
>PYEL1_METAC (P58862) PyrE-like protein 1| Length = 204 Score = 27.7 bits (60), Expect = 7.2 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = +1 Query: 10 NQNTVTGQXADSSNIST*TRFWPMTR 87 N VTGQ AD N+S T W +TR Sbjct: 16 NNGLVTGQIADELNVSRETVTWLLTR 41
>PSAJ_TOBAC (P12193) Photosystem I reaction center subunit IX (PSI-J)| Length = 44 Score = 27.7 bits (60), Expect = 7.2 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = +2 Query: 218 LNSLDTFLILIQRLYTLWLAPLLKILLGINRF 313 + L T+L + L TLW L +L+ INRF Sbjct: 1 MRDLKTYLSVAPVLSTLWFGALAGLLIEINRF 32
>PSAJ_PANGI (Q68RY6) Photosystem I reaction center subunit IX (PSI-J)| Length = 42 Score = 27.7 bits (60), Expect = 7.2 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = +2 Query: 218 LNSLDTFLILIQRLYTLWLAPLLKILLGINRF 313 + L T+L + L TLW L +L+ INRF Sbjct: 1 MRDLKTYLSVAPVLSTLWFGSLAGLLIEINRF 32
>ARAB_BACSU (P94524) Ribulokinase (EC 2.7.1.16)| Length = 560 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/35 (34%), Positives = 21/35 (60%) Frame = -2 Query: 282 SGASHSV*SRCMSMRNVSRELRPMIPGTSTALGNI 178 SG+ HSV + S+ +L ++PGT+ A+ N+ Sbjct: 236 SGSIHSVGEKAGSLTEKMAKLTGLLPGTAVAVANV 270
>OAZ1_MESAU (P70112) Ornithine decarboxylase antizyme (ODC-Az)| Length = 221 Score = 27.3 bits (59), Expect = 9.4 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = +1 Query: 238 SHTHTAALHTVACTAPQDTSWDQQVPHPPWRLRGPSG 348 S + AALH + P W VPHPP ++ G G Sbjct: 46 SESSRAALHCCSNLGP-GPRWCSYVPHPPLKIPGGRG 81
>HSDR_STAS1 (Q4A127) Type-1 restriction enzyme R protein (EC 3.1.21.3) (Type I| restriction enzyme R protein) Length = 930 Score = 27.3 bits (59), Expect = 9.4 Identities = 12/33 (36%), Positives = 21/33 (63%) Frame = +3 Query: 27 RTIXRLVKYFNLNKVLANDQAHSLKVAPQYHFS 125 ++I LVKY++ K ++ D H LKVA + ++ Sbjct: 501 QSIPALVKYYDAFKKISKDYEHPLKVAGVFSYA 533
>INSR_HUMAN (P06213) Insulin receptor precursor (EC 2.7.10.1) (IR) (CD220| antigen) [Contains: Insulin receptor alpha subunit; Insulin receptor beta subunit] Length = 1382 Score = 27.3 bits (59), Expect = 9.4 Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 9/48 (18%) Frame = -1 Query: 313 EPVDPKK-------YLEERCKPQCVKPLYEYE--KCIKRVEADDTGHK 197 +P DP K YL+ RC C P Y ++ +C+ D HK Sbjct: 245 QPDDPTKCVACRNFYLDGRCVETCPPPYYHFQDWRCVNFSFCQDLHHK 292
>E74EB_DROME (P11536) Ecdysone-induced protein 74EF isoform B (ETS-related| protein E74B) Length = 883 Score = 27.3 bits (59), Expect = 9.4 Identities = 20/74 (27%), Positives = 30/74 (40%) Frame = +1 Query: 121 SAFQRALVLHIYRCMTNSQNIAQCSACARYHRPQLS*YISHTHTAALHTVACTAPQDTSW 300 +A QR ++ Y + Q Q S ++ + +SH ALH + Q Sbjct: 598 AASQRGTTINGYHSLHQQQQQQQQSQQSQQQQQLAHQQLSHQQQQALHQ-QLSHQQQQQQ 656 Query: 301 DQQVPHPPWRLRGP 342 QQ HP +L GP Sbjct: 657 QQQQQHPHSQLNGP 670
>E74EA_DROME (P20105) Ecdysone-induced protein 74EF isoform A (ETS-related| protein E74A) Length = 829 Score = 27.3 bits (59), Expect = 9.4 Identities = 20/74 (27%), Positives = 30/74 (40%) Frame = +1 Query: 121 SAFQRALVLHIYRCMTNSQNIAQCSACARYHRPQLS*YISHTHTAALHTVACTAPQDTSW 300 +A QR ++ Y + Q Q S ++ + +SH ALH + Q Sbjct: 544 AASQRGTTINGYHSLHQQQQQQQQSQQSQQQQQLAHQQLSHQQQQALHQ-QLSHQQQQQQ 602 Query: 301 DQQVPHPPWRLRGP 342 QQ HP +L GP Sbjct: 603 QQQQQHPHSQLNGP 616
>TRMU_CHLAB (Q5L6D1) Probable tRNA| (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) Length = 362 Score = 27.3 bits (59), Expect = 9.4 Identities = 16/53 (30%), Positives = 23/53 (43%) Frame = +1 Query: 127 FQRALVLHIYRCMTNSQNIAQCSACARYHRPQLS*YISHTHTAALHTVACTAP 285 +Q+ L + ++I +CSA RY P I HT T V T+P Sbjct: 277 YQQELTAKELNWFVSPESITRCSAKVRYRSPDEECEILHTGTQDTVRVRFTSP 329
>ACEK_PSEPK (Q88EA1) Isocitrate dehydrogenase kinase/phosphatase (EC 2.7.11.5)| (EC 3.1.3.-) (IDH kinase/phosphatase) (IDHK/P) Length = 571 Score = 27.3 bits (59), Expect = 9.4 Identities = 14/50 (28%), Positives = 22/50 (44%) Frame = -1 Query: 340 DRVIAMADEEPVDPKKYLEERCKPQCVKPLYEYEKCIKRVEADDTGHKHC 191 DRV MAD + ++ + +P C+ L E +E D +HC Sbjct: 367 DRVGRMADTQEFADFRFPRSKFEPDCLAELLEVAPSTVALEGDTVLIRHC 416 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,654,639 Number of Sequences: 219361 Number of extensions: 1086578 Number of successful extensions: 2970 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 2905 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2968 length of database: 80,573,946 effective HSP length: 94 effective length of database: 59,954,012 effective search space used: 1438896288 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
