Clone Name	rbasd24b13
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|AK060396.1| Oryza sativa (japonica cultivar-group) cDNA clon...	224	2e-55
2	gb|AY107547.1| Zea mays PCO133895 mRNA sequence	174	1e-40
3	gb|AC120533.4| Oryza sativa (japonica cultivar-group) chromosome...	105	1e-19
4	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	105	1e-19
5	gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...	105	1e-19
6	gb|AY110144.1| Zea mays CL7431_1 mRNA sequence	94	4e-16
7	ref|NM_101380.2| Arabidopsis thaliana ubiquinol-cytochrome-c red...	66	8e-08
8	emb|BX818740.1|CNS0AAJA Arabidopsis thaliana Full-length cDNA Co...	66	8e-08
9	gb|AY085872.1| Arabidopsis thaliana clone 19178 mRNA, complete s...	66	8e-08
10	emb|BX818654.1|CNS0AE7V Arabidopsis thaliana Full-length cDNA Co...	50	0.005
11	gb|AC007591.2|F9L1 Arabidopsis thaliana chromosome 1 BAC F9L1 se...	50	0.005
12	emb|AL034397.1|HS159A1 Human DNA sequence from clone RP6-159A1 o...	46	0.077
13	emb|CT009635.18| Mouse DNA sequence from clone RP23-109E18 on ch...	44	0.30
14	ref|NM_126171.2| Arabidopsis thaliana ubiquinol-cytochrome-c red...	42	1.2
15	ref|XM_525567.1| PREDICTED: Pan troglodytes phospholipase A2, gr...	42	1.2
16	emb|CT009550.5| Mouse DNA sequence from clone RP23-38F20 on chro...	42	1.2
17	gb|AY040063.1| Arabidopsis thaliana putative ubiquinol-cytochrom...	42	1.2
18	gb|AF360220.1| Arabidopsis thaliana putative ubiquinol-cytochrom...	42	1.2
19	gb|AC105316.5| Homo sapiens BAC clone RP11-524B5 from 4, complet...	42	1.2
20	gb|AC006837.16| Arabidopsis thaliana chromosome 2 BAC F23H14 gen...	42	1.2
21	gb|AC009078.6| Homo sapiens chromosome 16 clone RP11-331F4, comp...	42	1.2
22	gb|AC019181.4| Homo sapiens BAC clone RP11-272E3 from 2, complet...	42	1.2
23	gb|AC005005.1|AC005005 Homo sapiens PAC clone RP3-412A9 from 22,...	42	1.2
24	gb|AC166333.9| Mus musculus chromosome 1, clone RP23-395A13, com...	40	4.8
25	ref|NM_015633.1| Homo sapiens FGFR1 oncogene partner 2 (FGFR1OP2...	40	4.8
26	gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chr...	40	4.8
27	ref|XM_612091.2| PREDICTED: Bos taurus similar to FGFR1 oncogene...	40	4.8
28	ref|XM_864324.1| PREDICTED: Bos taurus similar to FGFR1 oncogene...	40	4.8
29	gb|AY506561.1| Homo sapiens HSPC123-like protein mRNA, complete cds	40	4.8
30	ref|XM_567721.1| Cryptococcus neoformans var. neoformans JEC21 u...	40	4.8
31	gb|AC163007.4| Mus musculus chromosome 1, clone RP23-421G18, com...	40	4.8
32	gb|AC161606.5| Mus musculus BAC clone RP23-232M18 from chromosom...	40	4.8
33	emb|CR925699.6| Zebrafish DNA sequence from clone RP71-18J1 in l...	40	4.8
34	gb|AC116904.7| Homo sapiens chromosome 18, clone RP11-1112M8, co...	40	4.8
35	gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome	40	4.8
36	dbj|AK094888.1| Homo sapiens cDNA FLJ37569 fis, clone BRCOC2002659	40	4.8
37	dbj|AK001534.1| Homo sapiens cDNA FLJ10672 fis, clone NT2RP2006365	40	4.8
38	dbj|AB179153.1| Macaca fascicularis testis cDNA clone: QtsA-1382...	40	4.8
39	gb|AF161472.1|AF161472 Homo sapiens HSPC123 mRNA, complete cds	40	4.8
40	gb|AC125611.4| Homo sapiens 12 BAC RP11-161H23 (Roswell Park Can...	40	4.8
41	gb|AY107160.1| Zea mays PCO136336 mRNA sequence	40	4.8
42	gb|AC116952.4| Mus musculus BAC clone RP23-104A7 from 14, comple...	40	4.8
43	emb|AL117608.1|HSM801143 Homo sapiens mRNA; cDNA DKFZp564O1863 (...	40	4.8

---

>dbj|AK060396.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-B03, full
           insert sequence
          Length = 484

 Score =  224 bits (113), Expect = 2e-55
 Identities = 191/217 (88%)
 Strand = Plus / Minus

                                                                       
Query: 115 atcatttcagcttttcaaagagctttggtgctacacatttatcgatgcatgaccaatagt 174
           ||||||| ||||| |||| ||| || |||||||||||||| || ||||||||||||||||
Sbjct: 323 atcatttgagcttctcaaggagtttcggtgctacacatttgtcaatgcatgaccaatagt 264

                                                                       
Query: 175 caaaatattgcccagtgcagtgcttgtgcccggtatcatcggcctcaactctcttgatac 234
           | |||||||||||||||||||| || ||||| ||||||||   ||| ||||||||||  |
Sbjct: 263 cgaaatattgcccagtgcagtgtttatgcccagtatcatccttctccactctcttgacgc 204

                                                                       
Query: 235 atttctcatactcatacagcggctttacacactgtggcttgcaccgctcctcaagatact 294
           | |||||||||||||| || |||||||| ||||| |||||||| ||||||||||| ||||
Sbjct: 203 acttctcatactcatagagtggctttacgcactggggcttgcagcgctcctcaaggtact 144

                                                
Query: 295 tcttgggatcaacaggttcctcatccgccatggcgat 331
           |||| |||||||||||||| |||||||||||||||||
Sbjct: 143 tctttggatcaacaggttcttcatccgccatggcgat 107

---

>gb|AY107547.1| Zea mays PCO133895 mRNA sequence
          Length = 564

 Score =  174 bits (88), Expect = 1e-40
 Identities = 184/216 (85%)
 Strand = Plus / Minus

                                                                       
Query: 115 atcatttcagcttttcaaagagctttggtgctacacatttatcgatgcatgaccaatagt 174
           ||||||| ||||| | ||||||||||| |||||||||||| |||||||||||||| || |
Sbjct: 322 atcatttgagcttcttaaagagctttgatgctacacatttgtcgatgcatgaccagtaat 263

                                                                       
Query: 175 caaaatattgcccagtgcagtgcttgtgcccggtatcatcggcctcaactctcttgatac 234
           |||| ||||||||||||||||| ||||| || ||||||||   ||||||||||||||  |
Sbjct: 262 caaagtattgcccagtgcagtgtttgtgaccagtatcatcattctcaactctcttgacgc 203

                                                                       
Query: 235 atttctcatactcatacagcggctttacacactgtggcttgcaccgctcctcaagatact 294
           |||||||||| || || || |  |||||||| || |||||||| || ||||||||||| |
Sbjct: 202 atttctcatattcgtaaagtgattttacacattgcggcttgcatcgttcctcaagatatt 143

                                               
Query: 295 tcttgggatcaacaggttcctcatccgccatggcga 330
           ||||  |||||||| ||||||| ||| |||||||||
Sbjct: 142 tcttctgatcaacaagttcctcgtcctccatggcga 107

---

>gb|AC120533.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0081F16 map E50055S, complete sequence
          Length = 148220

 Score =  105 bits (53), Expect = 1e-19
 Identities = 77/85 (90%)
 Strand = Plus / Minus

                                                                         
Query: 239   ctcatactcatacagcggctttacacactgtggcttgcaccgctcctcaagatacttctt 298
             |||||||||||| || |||||||| ||||| |||||||| ||||||||||| ||||||||
Sbjct: 24239 ctcatactcatagagtggctttacgcactggggcttgcagcgctcctcaaggtacttctt 24180

                                      
Query: 299   gggatcaacaggttcctcatccgcc 323
              |||||||||||||| |||||||||
Sbjct: 24179 tggatcaacaggttcttcatccgcc 24155



 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                         
Query: 146   tacacatttatcgatgcatgaccaatagtcaaaatattgcccagtgcagtgcttgtgccc 205
             ||||||||| || ||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct: 25148 tacacatttgtcaatgcatgaccaatagtcgaaatattgcccagtgcagtgtttatgccc 25089

                                       
Query: 206   ggtatcatcggcctcaactctcttga 231
              ||||||||   ||| ||||||||||
Sbjct: 25088 agtatcatccttctccactctcttga 25063

---

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  105 bits (53), Expect = 1e-19
 Identities = 77/85 (90%)
 Strand = Plus / Minus

                                                                           
Query: 239     ctcatactcatacagcggctttacacactgtggcttgcaccgctcctcaagatacttctt 298
               |||||||||||| || |||||||| ||||| |||||||| ||||||||||| ||||||||
Sbjct: 3018869 ctcatactcatagagtggctttacgcactggggcttgcagcgctcctcaaggtacttctt 3018810

                                        
Query: 299     gggatcaacaggttcctcatccgcc 323
                |||||||||||||| |||||||||
Sbjct: 3018809 tggatcaacaggttcttcatccgcc 3018785



 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                           
Query: 146     tacacatttatcgatgcatgaccaatagtcaaaatattgcccagtgcagtgcttgtgccc 205
               ||||||||| || ||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct: 3019778 tacacatttgtcaatgcatgaccaatagtcgaaatattgcccagtgcagtgtttatgccc 3019719

                                         
Query: 206     ggtatcatcggcctcaactctcttga 231
                ||||||||   ||| ||||||||||
Sbjct: 3019718 agtatcatccttctccactctcttga 3019693

---

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  105 bits (53), Expect = 1e-19
 Identities = 77/85 (90%)
 Strand = Plus / Minus

                                                                           
Query: 239     ctcatactcatacagcggctttacacactgtggcttgcaccgctcctcaagatacttctt 298
               |||||||||||| || |||||||| ||||| |||||||| ||||||||||| ||||||||
Sbjct: 3027900 ctcatactcatagagtggctttacgcactggggcttgcagcgctcctcaaggtacttctt 3027841

                                        
Query: 299     gggatcaacaggttcctcatccgcc 323
                |||||||||||||| |||||||||
Sbjct: 3027840 tggatcaacaggttcttcatccgcc 3027816



 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                           
Query: 146     tacacatttatcgatgcatgaccaatagtcaaaatattgcccagtgcagtgcttgtgccc 205
               ||||||||| || ||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct: 3028809 tacacatttgtcaatgcatgaccaatagtcgaaatattgcccagtgcagtgtttatgccc 3028750

                                         
Query: 206     ggtatcatcggcctcaactctcttga 231
                ||||||||   ||| ||||||||||
Sbjct: 3028749 agtatcatccttctccactctcttga 3028724

---

>gb|AY110144.1| Zea mays CL7431_1 mRNA sequence
          Length = 1515

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 168/210 (80%)
 Strand = Plus / Minus

                                                                       
Query: 114 tatcatttcagcttttcaaagagctttggtgctacacatttatcgatgcatgaccaatag 173
           ||||||||||| || || |||||||||||||| ||||| || || | ||||||||| |||
Sbjct: 655 tatcatttcagtttgtcgaagagctttggtgcaacacacttgtcaacgcatgaccagtag 596

                                                                       
Query: 174 tcaaaatattgcccagtgcagtgcttgtgcccggtatcatcggcctcaactctcttgata 233
           || || ||||| || ||||||||||| |||||  |  | |||  ||| ||||||||||  
Sbjct: 595 tcgaagtattggccggtgcagtgcttctgcccacttccgtcgctctcgactctcttgacg 536

                                                                       
Query: 234 catttctcatactcatacagcggctttacacactgtggcttgcaccgctcctcaagatac 293
           ||||||||||| |||||||  |     ||||| || |||||||| || |||||||| || 
Sbjct: 535 catttctcataatcatacaatgnnnnnacacattgcggcttgcaacgttcctcaaggtaa 476

                                         
Query: 294 ttcttgggatcaacaggttcctcatccgcc 323
           |||||  |||||||||||||  ||||||||
Sbjct: 475 ttcttctgatcaacaggttcagcatccgcc 446

---

>ref|NM_101380.2| Arabidopsis thaliana ubiquinol-cytochrome-c reductase AT1G15120
           mRNA, complete cds
          Length = 599

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                       
Query: 130 caaagagctttggtgctacacatttatcgatgcatgaccaatagtcaaaatattgcccag 189
           |||| ||||||||||| |||||||| || ||||||  ||| ||||||||||| || ||||
Sbjct: 289 caaacagctttggtgcaacacatttgtcaatgcattgccagtagtcaaaatactggccag 230

                        
Query: 190 tgcagtgcttgtg 202
           |||| ||||||||
Sbjct: 229 tgcaatgcttgtg 217

---

>emb|BX818740.1|CNS0AAJA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL9ZB07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 409

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                       
Query: 130 caaagagctttggtgctacacatttatcgatgcatgaccaatagtcaaaatattgcccag 189
           |||| ||||||||||| |||||||| || ||||||  ||| ||||||||||| || ||||
Sbjct: 222 caaacagctttggtgcaacacatttgtcaatgcattgccagtagtcaaaatactggccag 163

                        
Query: 190 tgcagtgcttgtg 202
           |||| ||||||||
Sbjct: 162 tgcaatgcttgtg 150

---

>gb|AY085872.1| Arabidopsis thaliana clone 19178 mRNA, complete sequence
          Length = 595

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                       
Query: 130 caaagagctttggtgctacacatttatcgatgcatgaccaatagtcaaaatattgcccag 189
           |||| ||||||||||| |||||||| || ||||||  ||| ||||||||||| || ||||
Sbjct: 290 caaacagctttggtgcaacacatttgtcaatgcattgccagtagtcaaaatactggccag 231

                        
Query: 190 tgcagtgcttgtg 202
           |||| ||||||||
Sbjct: 230 tgcaatgcttgtg 218

---

>emb|BX818654.1|CNS0AE7V Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL90ZC01 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 570

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 61/73 (83%)
 Strand = Plus / Minus

                                                                       
Query: 130 caaagagctttggtgctacacatttatcgatgcatgaccaatagtcaaaatattgcccag 189
           |||| ||||||||||| | |||||| |  ||||||  ||| ||||||||||| || ||||
Sbjct: 262 caaacagctttggtgcaaaacatttgttaatgcattgccagtagtcaaaatactggccag 203

                        
Query: 190 tgcagtgcttgtg 202
           |||| ||||||||
Sbjct: 202 tgcaatgcttgtg 190

---

>gb|AC007591.2|F9L1 Arabidopsis thaliana chromosome 1 BAC F9L1 sequence, complete sequence
          Length = 141984

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                      
Query: 146   tacacatttatcgatgcatgaccaatagtcaaaatattgcccagtgcagtgcttgtg 202
             ||||||||| || ||||||  ||| ||||||||||| || |||||||| ||||||||
Sbjct: 19305 tacacatttgtcaatgcattgccagtagtcaaaatactggccagtgcaatgcttgtg 19249

---

>emb|AL034397.1|HS159A1 Human DNA sequence from clone RP6-159A1 on chromosome Xq12-13.3
             Contains the gene for Ig superfamily protein (Z39IG), a
             novel gene, a heterogenous nuclear ribonucleoprotein G
             pseudogene and a CpG island, complete sequence
          Length = 115218

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 178   aatattgcccagtgcagtgcttg 200
             |||||||||||||||||||||||
Sbjct: 64614 aatattgcccagtgcagtgcttg 64636

---

>emb|CT009635.18| Mouse DNA sequence from clone RP23-109E18 on chromosome 17, complete
              sequence
          Length = 216634

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 114    tatcatttcagcttttcaaaga 135
              ||||||||||||||||||||||
Sbjct: 168234 tatcatttcagcttttcaaaga 168255

---

>ref|NM_126171.2| Arabidopsis thaliana ubiquinol-cytochrome-c reductase AT2G01090
           mRNA, complete cds
          Length = 512

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 174 tcaaaatattgcccagtgcagtgcttgtg 202
           |||||||||||||||||||| || |||||
Sbjct: 232 tcaaaatattgcccagtgcaatgtttgtg 204

---

>ref|XM_525567.1| PREDICTED: Pan troglodytes phospholipase A2, group III (LOC470183),
           mRNA
          Length = 2022

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 122 cagcttttcaaagagctttgg 142
           |||||||||||||||||||||
Sbjct: 232 cagcttttcaaagagctttgg 252

---

>emb|CT009550.5| Mouse DNA sequence from clone RP23-38F20 on chromosome 14, complete
             sequence
          Length = 229049

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 183   tgcccagtgcagtgcttgtgc 203
             |||||||||||||||||||||
Sbjct: 91594 tgcccagtgcagtgcttgtgc 91614

---

>gb|AY040063.1| Arabidopsis thaliana putative ubiquinol-cytochrome c reductase
           (At2g01090) mRNA, complete cds
          Length = 189

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 174 tcaaaatattgcccagtgcagtgcttgtg 202
           |||||||||||||||||||| || |||||
Sbjct: 152 tcaaaatattgcccagtgcaatgtttgtg 124

---

>gb|AF360220.1| Arabidopsis thaliana putative ubiquinol-cytochrome c reductase
           (At2g01090) mRNA, complete cds
          Length = 399

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 174 tcaaaatattgcccagtgcagtgcttgtg 202
           |||||||||||||||||||| || |||||
Sbjct: 232 tcaaaatattgcccagtgcaatgtttgtg 204

---

>gb|AC105316.5| Homo sapiens BAC clone RP11-524B5 from 4, complete sequence
          Length = 148571

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 77    caatgaccaggctcactcact 97
             |||||||||||||||||||||
Sbjct: 75108 caatgaccaggctcactcact 75088

---

>gb|AC006837.16| Arabidopsis thaliana chromosome 2 BAC F23H14 genomic sequence, complete
             sequence
          Length = 91268

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 174   tcaaaatattgcccagtgcagtgcttgtg 202
             |||||||||||||||||||| || |||||
Sbjct: 79920 tcaaaatattgcccagtgcaatgtttgtg 79892

---

>gb|AC009078.6| Homo sapiens chromosome 16 clone RP11-331F4, complete sequence
          Length = 176926

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 282   tcctcaagatacttcttggga 302
             |||||||||||||||||||||
Sbjct: 91063 tcctcaagatacttcttggga 91043

---

>gb|AC019181.4| Homo sapiens BAC clone RP11-272E3 from 2, complete sequence
          Length = 190998

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 159   atgcatgaccaatagtcaaaa 179
             |||||||||||||||||||||
Sbjct: 47990 atgcatgaccaatagtcaaaa 47970

---

>gb|AC005005.1|AC005005 Homo sapiens PAC clone RP3-412A9 from 22, complete sequence
          Length = 133893

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 122   cagcttttcaaagagctttgg 142
             |||||||||||||||||||||
Sbjct: 18047 cagcttttcaaagagctttgg 18067

---

>gb|AC166333.9| Mus musculus chromosome 1, clone RP23-395A13, complete sequence
          Length = 188044

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 4      tcatgaaatcaaaacacagt 23
              ||||||||||||||||||||
Sbjct: 187966 tcatgaaatcaaaacacagt 187947

---

>ref|NM_015633.1| Homo sapiens FGFR1 oncogene partner 2 (FGFR1OP2), mRNA
          Length = 2306

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 49  aatatttcaacttgaacaag 68
           ||||||||||||||||||||
Sbjct: 951 aatatttcaacttgaacaag 970

---

>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete
              sequence
          Length = 1019846

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 281    ctcctcaagatacttcttgg 300
              ||||||||||||||||||||
Sbjct: 730736 ctcctcaagatacttcttgg 730717

---

>ref|XM_612091.2| PREDICTED: Bos taurus similar to FGFR1 oncogene partner 2,
           transcript variant 1 (LOC532881), mRNA
          Length = 2655

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 49  aatatttcaacttgaacaag 68
           ||||||||||||||||||||
Sbjct: 495 aatatttcaacttgaacaag 514

---

>ref|XM_864324.1| PREDICTED: Bos taurus similar to FGFR1 oncogene partner 2,
           transcript variant 2 (LOC532881), mRNA
          Length = 762

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 49  aatatttcaacttgaacaag 68
           ||||||||||||||||||||
Sbjct: 609 aatatttcaacttgaacaag 628

---

>gb|AY506561.1| Homo sapiens HSPC123-like protein mRNA, complete cds
          Length = 648

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 49  aatatttcaacttgaacaag 68
           ||||||||||||||||||||
Sbjct: 495 aatatttcaacttgaacaag 514

---

>ref|XM_567721.1| Cryptococcus neoformans var. neoformans JEC21 uroporphyrinogen-III
           synthase (CNK02510) partial mRNA
          Length = 900

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 281 ctcctcaagatacttcttgg 300
           ||||||||||||||||||||
Sbjct: 816 ctcctcaagatacttcttgg 797

---

>gb|AC163007.4| Mus musculus chromosome 1, clone RP23-421G18, complete sequence
          Length = 195727

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 4      tcatgaaatcaaaacacagt 23
              ||||||||||||||||||||
Sbjct: 143720 tcatgaaatcaaaacacagt 143739

---

>gb|AC161606.5| Mus musculus BAC clone RP23-232M18 from chromosome 14, complete
             sequence
          Length = 223037

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 175   caaaatattgcccagtgcagtgct 198
             |||||||| |||||||||||||||
Sbjct: 59430 caaaatatagcccagtgcagtgct 59407

---

>emb|CR925699.6| Zebrafish DNA sequence from clone RP71-18J1 in linkage group 4,
             complete sequence
          Length = 150030

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 234   catttctcatactcatacag 253
             ||||||||||||||||||||
Sbjct: 17011 catttctcatactcatacag 16992

---

>gb|AC116904.7| Homo sapiens chromosome 18, clone RP11-1112M8, complete sequence
          Length = 164394

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                         
Query: 178   aatattgcccagtgcagtg-cttgtgcc 204
             ||||||||||||||||||| ||||||||
Sbjct: 37644 aatattgcccagtgcagtgacttgtgcc 37617

---

>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 118    atttcagcttttcaaagagc 137
              ||||||||||||||||||||
Sbjct: 138258 atttcagcttttcaaagagc 138277

---

>dbj|AK094888.1| Homo sapiens cDNA FLJ37569 fis, clone BRCOC2002659
          Length = 2938

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 49   aatatttcaacttgaacaag 68
            ||||||||||||||||||||
Sbjct: 2438 aatatttcaacttgaacaag 2457

---

>dbj|AK001534.1| Homo sapiens cDNA FLJ10672 fis, clone NT2RP2006365
          Length = 2306

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 49  aatatttcaacttgaacaag 68
           ||||||||||||||||||||
Sbjct: 951 aatatttcaacttgaacaag 970

---

>dbj|AB179153.1| Macaca fascicularis testis cDNA clone: QtsA-13825, similar to human
            FGFR1 oncogene partner 2 (FGFR1OP2), mRNA, RefSeq:
            NM_015633.1
          Length = 2404

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 49   aatatttcaacttgaacaag 68
            ||||||||||||||||||||
Sbjct: 1732 aatatttcaacttgaacaag 1751

---

>gb|AF161472.1|AF161472 Homo sapiens HSPC123 mRNA, complete cds
          Length = 1520

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 49  aatatttcaacttgaacaag 68
           ||||||||||||||||||||
Sbjct: 714 aatatttcaacttgaacaag 733

---

>gb|AC125611.4| Homo sapiens 12 BAC RP11-161H23 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 194578

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    aatatttcaacttgaacaag 68
             ||||||||||||||||||||
Sbjct: 57561 aatatttcaacttgaacaag 57542

---

>gb|AY107160.1| Zea mays PCO136336 mRNA sequence
          Length = 849

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                       
Query: 192 cagtgcttgtgcccggtatcatcggcctcaactctcttgatacatttctcatactcatac 251
           |||||||||||||| || |||||| ||||||  || || | |||||||| ||| ||||||
Sbjct: 272 cagtgcttgtgcccagtctcatcgtcctcaatccttttaacacatttctgataatcatac 213

---

>gb|AC116952.4| Mus musculus BAC clone RP23-104A7 from 14, complete sequence
          Length = 210088

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 175    caaaatattgcccagtgcagtgct 198
              |||||||| |||||||||||||||
Sbjct: 197494 caaaatatagcccagtgcagtgct 197471

---

>emb|AL117608.1|HSM801143 Homo sapiens mRNA; cDNA DKFZp564O1863 (from clone DKFZp564O1863);
           partial cds
          Length = 2445

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 49  aatatttcaacttgaacaag 68
           ||||||||||||||||||||
Sbjct: 356 aatatttcaacttgaacaag 375


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,081,922
Number of Sequences: 3902068
Number of extensions: 3081922
Number of successful extensions: 58050
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 57944
Number of HSP's gapped (non-prelim): 107
length of query: 358
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 336
effective length of database: 17,147,199,772
effective search space: 5761459123392
effective search space used: 5761459123392
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---