Clone Name	rbasd24b08
Clone Library Name	barley_pub

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No.	Definition	Score (bits)	E Value
1	RU17_XENLA (P09406) U1 small nuclear ribonucleoprotein 70 kDa (U...	40	0.005
2	RU17_DROME (P17133) U1 small nuclear ribonucleoprotein 70 kDa (U...	39	0.012
3	K0553_HUMAN (Q9UKJ3) Protein KIAA0553	39	0.016
4	RU17_MOUSE (Q62376) U1 small nuclear ribonucleoprotein 70 kDa (U...	39	0.016
5	DHX8_ARATH (Q38953) Probable pre-mRNA-splicing factor ATP-depend...	38	0.020
6	RBM25_HUMAN (P49756) Probable RNA-binding protein 25 (RNA-bindin...	38	0.020
7	ACINU_MOUSE (Q9JIX8) Apoptotic chromatin condensation inducer in...	38	0.027
8	ACINU_HUMAN (Q9UKV3) Apoptotic chromatin condensation inducer in...	38	0.027
9	K0853_HUMAN (Q5T200) Protein KIAA0853	38	0.027
10	DHX8_HUMAN (Q14562) ATP-dependent RNA helicase DHX8 (EC 3.6.1.-)...	38	0.027
11	DDX23_PONPY (Q5RC67) Probable ATP-dependent RNA helicase DDX23 (...	38	0.027
12	DDX23_HUMAN (Q9BUQ8) Probable ATP-dependent RNA helicase DDX23 (...	38	0.027
13	CPSF6_BRARE (Q6NWC6) Cleavage and polyadenylation specificity fa...	37	0.035
14	MOG5_CAEEL (Q09530) Probable pre-mRNA-splicing factor ATP-depend...	37	0.035
15	CWC25_ASPFU (Q4X1D7) Pre-mRNA-splicing factor cwc25	37	0.035
16	CPSF6_PONPY (Q5NVH8) Cleavage and polyadenylation specificity fa...	37	0.035
17	CPSF6_MOUSE (Q6NVF9) Cleavage and polyadenylation specificity fa...	37	0.035
18	CPSF6_HUMAN (Q16630) Cleavage and polyadenylation specificity fa...	37	0.035
19	CPSF6_CHICK (Q5ZL34) Cleavage and polyadenylation specificity fa...	37	0.035
20	CPSF6_XENLA (Q6DDW4) Cleavage and polyadenylation specificity fa...	37	0.035
21	CROP_PONPY (Q5R8W6) Cisplatin resistance-associated overexpresse...	37	0.045
22	CROP_MOUSE (Q5SUF2) Cisplatin resistance-associated overexpresse...	37	0.045
23	CROP_HUMAN (O95232) Cisplatin resistance-associated overexpresse...	37	0.045
24	CROP_BOVIN (Q3SX41) Cisplatin resistance-associated overexpresse...	37	0.045
25	RU17_XENTR (Q66II8) U1 small nuclear ribonucleoprotein 70 kDa (U...	37	0.045
26	RU17_HUMAN (P08621) U1 small nuclear ribonucleoprotein 70 kDa (U...	37	0.045
27	PRP5_CRYNE (Q5KME7) Pre-mRNA-processing ATP-dependent RNA helica...	37	0.059
28	RU17_ARATH (Q42404) U1 small nuclear ribonucleoprotein 70 kDa (U...	37	0.059
29	FIP1_HUMAN (Q6UN15) Pre-mRNA 3'-end-processing factor FIP1 (FIP1...	37	0.059
30	RSP7_CAEEL (O01159) Probable splicing factor, arginine/serine-ri...	37	0.059
31	FIP1_PONPY (Q5RAA7) Pre-mRNA 3'-end-processing factor FIP1 (FIP1...	37	0.059
32	RBM5_HUMAN (P52756) RNA-binding protein 5 (RNA-binding motif pro...	36	0.077
33	U2AF2_CAEBR (P90727) Splicing factor U2AF 65 kDa subunit (U2 aux...	36	0.10
34	NELFE_HUMAN (P18615) Negative elongation factor E (NELF-E) (RD p...	36	0.10
35	PRP5_YARLI (Q6CCZ1) Pre-mRNA-processing ATP-dependent RNA helica...	35	0.13
36	U2AFM_HUMAN (Q15696) U2 small nuclear ribonucleoprotein auxiliar...	35	0.13
37	RBM16_HUMAN (Q9UPN6) Putative RNA-binding protein 16 (RNA-bindin...	35	0.17
38	DDX3Y_PANTR (Q6GVM6) ATP-dependent RNA helicase DDX3Y (EC 3.6.1....	35	0.23
39	CWC25_NEUCR (Q7SI59) Pre-mRNA-splicing factor cwc-25	35	0.23
40	BRE1A_MOUSE (Q5DTM8) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-)...	35	0.23
41	LC7L2_MOUSE (Q7TNC4) Putative RNA-binding protein Luc7-like 2 (C...	35	0.23
42	NELFE_MOUSE (P19426) Negative elongation factor E (NELF-E) (RD p...	35	0.23
43	PPIL4_USTMA (P0C196) Peptidyl-prolyl cis-trans isomerase-like 4 ...	35	0.23
44	STC_DROME (P40798) Protein shuttle craft	34	0.29
45	CACB2_HUMAN (Q08289) Voltage-dependent L-type calcium channel be...	34	0.29
46	BRE1A_HUMAN (Q5VTR2) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-)...	34	0.29
47	TRSF_DROME (P11596) Female-specific protein transformer	34	0.29
48	CWC25_EMENI (Q5B0I1) Pre-mRNA-splicing factor cwc25	34	0.29
49	ENT1_SCHPO (O74423) Epsin-1	34	0.29
50	RED_HUMAN (Q13123) Protein Red (Protein RER) (IK factor) (Cytoki...	34	0.29
51	DIDO1_HUMAN (Q9BTC0) Death-inducer obliterator 1 (DIO-1) (Death-...	34	0.29
52	RSP6_CAEEL (Q18409) Probable splicing factor, arginine/serine-ri...	34	0.29
53	TR150_XENLA (Q5BJ39) Thyroid hormone receptor-associated protein...	34	0.38
54	TR150_RAT (Q5M7V8) Thyroid hormone receptor-associated protein 3...	34	0.38
55	TR150_MOUSE (Q569Z6) Thyroid hormone receptor-associated protein...	34	0.38
56	CWC25_YARLI (Q6C1V6) Pre-mRNA-splicing factor CWC25	34	0.38
57	CCNL1_MOUSE (Q52KE7) Cyclin-L1 (Cyclin-L) (Cyclin Ania-6a)	34	0.38
58	CACB2_RABIT (P54288) Voltage-dependent L-type calcium channel be...	34	0.38
59	DHX15_MOUSE (O35286) Putative pre-mRNA-splicing factor ATP-depen...	34	0.38
60	DHX15_HUMAN (O43143) Putative pre-mRNA-splicing factor ATP-depen...	34	0.38
61	PPIL4_CRYNE (Q5KNY5) Peptidyl-prolyl cis-trans isomerase-like 4 ...	34	0.38
62	CCNL1_RAT (Q9R1Q2) Cyclin-L1 (Cyclin-L) (Cyclin Ania-6a)	34	0.38
63	CCNL1_HUMAN (Q9UK58) Cyclin-L1 (Cyclin-L)	34	0.38
64	TR150_HUMAN (Q9Y2W1) Thyroid hormone receptor-associated protein...	34	0.38
65	DDX3Y_HUMAN (O15523) ATP-dependent RNA helicase DDX3Y (EC 3.6.1....	33	0.50
66	CF151_MOUSE (Q9D361) U11/U12 snRNP 48 kDa protein	33	0.50
67	PRP16_HUMAN (Q92620) Pre-mRNA-splicing factor ATP-dependent RNA ...	33	0.50
68	SFR12_MOUSE (Q8BZX4) Splicing factor, arginine/serine-rich 12 (S...	33	0.50
69	DDX3Y_PONPY (Q5RF43) ATP-dependent RNA helicase DDX3Y (EC 3.6.1....	33	0.50
70	CD2L5_HUMAN (Q14004) Cell division cycle 2-like protein kinase 5...	33	0.50
71	DIDO1_MOUSE (Q8C9B9) Death-inducer obliterator 1 (DIO-1) (Death-...	33	0.50
72	SPP2_NEUCR (Q7SBU7) Pre-mRNA-splicing factor spp-2	33	0.66
73	CACB2_BOVIN (Q9MZL5) Voltage-dependent L-type calcium channel be...	33	0.66
74	LUC7L_HUMAN (Q9NQ29) Putative RNA-binding protein Luc7-like 1 (S...	33	0.66
75	SFR11_HUMAN (Q05519) Splicing factor arginine/serine-rich 11 (Ar...	33	0.66
76	PPIL4_NEUCR (Q871A4) Peptidyl-prolyl cis-trans isomerase-like 4 ...	33	0.66
77	U2AF2_CAEEL (P90978) Splicing factor U2AF 65 kDa subunit (U2 aux...	33	0.66
78	PRP5_ASPFU (Q4WT99) Pre-mRNA-processing ATP-dependent RNA helica...	33	0.86
79	LUC7L_MOUSE (Q9CYI4) Putative RNA-binding protein Luc7-like 1	33	0.86
80	FIP1_MOUSE (Q9D824) Pre-mRNA 3'-end-processing factor FIP1 (FIP1...	33	0.86
81	LC7L2_HUMAN (Q9Y383) Putative RNA-binding protein Luc7-like 2	33	0.86
82	FIP1_RAT (Q5U317) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-l...	33	0.86
83	CS029_MOUSE (Q9CS00) Protein C19orf29 homolog	33	0.86
84	RED_MOUSE (Q9Z1M8) Protein Red (Protein RER) (IK factor) (Cytoki...	33	0.86
85	ARS2_HUMAN (Q9BXP5) Arsenite-resistance protein 2	32	1.1
86	SFR12_RAT (Q9JKL7) Splicing factor, arginine/serine-rich 12 (Ser...	32	1.1
87	PRP5_NEUCR (Q7SH33) Pre-mRNA-processing ATP-dependent RNA helica...	32	1.1
88	ARS2_MOUSE (Q99MR6) Arsenite-resistance protein 2	32	1.1
89	TOP1_DROME (P30189) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoi...	32	1.1
90	PRP5_EMENI (Q5BDW4) Pre-mRNA-processing ATP-dependent RNA helica...	32	1.1
91	PQBP1_HUMAN (O60828) Polyglutamine-binding protein 1 (Polyglutam...	32	1.1
92	BRE1A_CHICK (Q5ZLS3) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-)...	32	1.1
93	YOW5_CAEEL (P30651) Hypothetical protein ZK643.5	32	1.1
94	PRP5_GIBZE (Q4IP34) Pre-mRNA-processing ATP-dependent RNA helica...	32	1.5
95	CYP1_BRUMA (Q27450) Peptidyl-prolyl cis-trans isomerase 1 (EC 5....	32	1.5
96	CF151_HUMAN (Q6IEG0) U11/U12 snRNP 48 kDa protein	32	1.5
97	RSRC1_RAT (Q5PPJ2) Arginine/serine-rich coiled coil protein 1	32	1.9
98	DDX46_BRARE (Q4TVV3) Probable ATP-dependent RNA helicase DDX46 (...	32	1.9
99	VE2_HPV20 (P50766) Regulatory protein E2	32	1.9
100	SFR12_HUMAN (Q8WXA9) Splicing factor, arginine/serine-rich 12 (S...	32	1.9
101	YLPM1_MOUSE (Q9R0I7) YLP motif-containing protein 1 (Nuclear pro...	32	1.9
102	YTDC1_HUMAN (Q96MU7) YTH domain-containing protein 1 (Putative s...	32	1.9
103	YTDC1_RAT (Q9QY02) YTH domain-containing protein 1 (Putative spl...	32	1.9
104	TOP1_MOUSE (Q04750) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoi...	32	1.9
105	NCOR1_XENTR (Q4KKX4) Nuclear receptor corepressor 1 (N-CoR1) (N-...	31	2.5
106	U2AF2_DROME (Q24562) Splicing factor U2AF 50 kDa subunit (U2 aux...	31	2.5
107	RSRC1_MOUSE (Q9DBU6) Arginine/serine-rich coiled coil protein 1	31	2.5
108	RSRC1_HUMAN (Q96IZ7) Arginine/serine-rich coiled coil protein 1	31	2.5
109	SNUT3_HUMAN (Q8WVK2) U4/U6.U5 tri-snRNP-associated protein 3 (U4...	31	2.5
110	SFR17_HUMAN (Q8TF01) Splicing factor, arginine/serine-rich 130 (...	31	2.5
111	YP62_CAEEL (Q09437) Putative serine/threonine-protein kinase B04...	31	2.5
112	CD2L7_CAEEL (P46551) Putative cell division cycle 2-related prot...	31	2.5
113	SNUT3_BRARE (Q6DH74) U4/U6.U5 tri-snRNP-associated protein 3	31	2.5
114	DDX3Y_MOUSE (Q62095) ATP-dependent RNA helicase DDX3Y (EC 3.6.1....	31	2.5
115	TOP1_HUMAN (P11387) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoi...	31	2.5
116	MOG1_CAEEL (P34498) Probable pre-mRNA-splicing factor ATP-depend...	31	2.5
117	CNG3_CHICK (Q90980) Cyclic nucleotide-gated channel, rod photore...	31	2.5
118	CACB2_RAT (Q8VGC3) Voltage-dependent L-type calcium channel beta...	31	3.3
119	CACB2_MOUSE (Q8CC27) Voltage-dependent L-type calcium channel be...	31	3.3
120	SFR15_RAT (Q63627) Splicing factor, arginine/serine-rich 15 (CTD...	31	3.3
121	DDX46_RAT (Q62780) Probable ATP-dependent RNA helicase DDX46 (EC...	31	3.3
122	DDX46_PONPY (Q5R6D8) Probable ATP-dependent RNA helicase DDX46 (...	31	3.3
123	DDX46_MOUSE (Q569Z5) Probable ATP-dependent RNA helicase DDX46 (...	31	3.3
124	DDX46_HUMAN (Q7L014) Probable ATP-dependent RNA helicase DDX46 (...	31	3.3
125	PRP5_ASPOR (Q2U2J6) Pre-mRNA-processing ATP-dependent RNA helica...	31	3.3
126	FIP1_BRARE (Q5XJD3) Pre-mRNA 3'-end-processing factor FIP1 (FIP1...	31	3.3
127	CD2L5_MOUSE (Q69ZA1) Cell division cycle 2-like protein kinase 5...	31	3.3
128	U2AF2_MOUSE (P26369) Splicing factor U2AF 65 kDa subunit (U2 aux...	31	3.3
129	U2AF2_HUMAN (P26368) Splicing factor U2AF 65 kDa subunit (U2 aux...	31	3.3
130	ZO2_HUMAN (Q9UDY2) Tight junction protein ZO-2 (Zonula occludens...	31	3.3
131	TOP1_RAT (Q9WUL0) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoiso...	31	3.3
132	TOP1_CRIGR (Q07050) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoi...	31	3.3
133	TOP1_CERAE (Q7YR26) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoi...	31	3.3
134	SFR15_HUMAN (O95104) Splicing factor, arginine/serine-rich 15 (C...	31	3.3
135	BTBDA_PONPY (Q5R585) BTB/POZ domain-containing protein 10	25	3.4
136	BTBDA_HUMAN (Q9BSF8) BTB/POZ domain-containing protein 10	25	3.4
137	YL53_CAEEL (P34433) Hypothetical protein F44E2.3	30	4.2
138	SPP2_EMENI (Q5B4R9) Pre-mRNA-splicing factor spp2	30	4.2
139	RBM23_HUMAN (Q86U06) Probable RNA-binding protein 23 (RNA-bindin...	30	4.2
140	BTBDA_MOUSE (Q80X66) BTB/POZ domain-containing protein 10	25	4.3
141	NO40_MACFA (Q95KF9) Nucleolar protein of 40 kDa (pNO40) (Zinc fi...	30	5.6
142	CWC25_DEBHA (Q6BNE1) Pre-mRNA-splicing factor CWC25	30	5.6
143	SNUT3_MOUSE (Q8K194) U4/U6.U5 tri-snRNP-associated protein 3	30	5.6
144	CVCB_PEA (P13919) Convicilin precursor (Fragment)	30	5.6
145	PPIL4_GIBZE (Q4IE79) Peptidyl-prolyl cis-trans isomerase-like 4 ...	30	5.6
146	CCAR1_XENLA (Q641G3) Cell division cycle and apoptosis regulator...	30	5.6
147	YP68_CAEEL (Q09217) Hypothetical protein B0495.8	30	5.6
148	SAFB1_RAT (O88453) Scaffold attachment factor B (Scaffold attach...	30	5.6
149	NO40_HUMAN (Q9NP64) Nucleolar protein of 40 kDa (pNO40) (Zinc fi...	30	5.6
150	CYP8_CAEEL (P52016) Peptidyl-prolyl cis-trans isomerase 8 (EC 5....	30	5.6
151	NCOR1_XENLA (Q8QG78) Nuclear receptor corepressor 1 (N-CoR1) (N-...	30	7.2
152	XE7_HUMAN (Q02040) B-lymphocyte antigen precursor (B-lymphocyte ...	30	7.2
153	CAC1B_DISOM (P56698) Probable voltage-dependent N-type calcium c...	30	7.2
154	CCNT_DROME (O96433) Cyclin-T	30	7.2
155	CBX8_HUMAN (Q9HC52) Chromobox protein homolog 8 (Polycomb 3 homo...	30	7.2
156	CWC22_YARLI (Q6C8C5) Pre-mRNA-splicing factor CWC22	30	7.2
157	SWC5_ASPFU (Q4WRE2) SWR1-complex protein 5	30	7.2
158	SFR16_MOUSE (Q8CFC7) Splicing factor, arginine/serine-rich 16 (S...	30	7.2
159	CCNL1_BRARE (Q7ZVX0) Cyclin-L1	30	7.2
160	DDX3X_MOUSE (Q62167) ATP-dependent RNA helicase DDX3X (EC 3.6.1....	30	7.2
161	DDX3X_HUMAN (O00571) ATP-dependent RNA helicase DDX3X (EC 3.6.1....	30	7.2
162	VP40_SCMVC (P16046) Capsid protein P40 [Contains: Assemblin (EC ...	29	9.5
163	PRP40_MOUSE (Q9R1C7) Pre-mRNA-processing factor 40 homolog A (Fo...	29	9.5
164	IF3A_MOUSE (P23116) Eukaryotic translation initiation factor 3 s...	29	9.5
165	TRA2_DROME (P19018) Transformer-2 sex-determining protein	29	9.5
166	RERE_RAT (Q62901) Arginine-glutamic acid dipeptide repeats prote...	29	9.5
167	CTDP1_HUMAN (Q9Y5B0) RNA polymerase II subunit A C-terminal doma...	29	9.5
168	DNMT1_HUMAN (P26358) DNA (cytosine-5)-methyltransferase 1 (EC 2....	29	9.5
169	IF3A_HUMAN (Q14152) Eukaryotic translation initiation factor 3 s...	29	9.5
170	RERE_MOUSE (Q80TZ9) Arginine-glutamic acid dipeptide repeats pro...	29	9.5

---

>RU17_XENLA (P09406) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70|
           kDa) (snRNP70) (U1-70K)
          Length = 471

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 21/53 (39%), Positives = 33/53 (62%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDR 454
           E++ D+E  ++D   RD D +R+RDR + HR RD+     D+++ R R  RDR
Sbjct: 355 ERDRDREKGEKD---RDKDRDRDRDRRRSHRDRDREKD-RDRDRDRRR-DRDR 402



 Score = 38.9 bits (89), Expect = 0.012
 Identities = 21/51 (41%), Positives = 30/51 (58%)
 Frame = -1

Query: 606 EVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDR 454
           E+ QE  ++    R+ D ER+RDR K  + RDK     D+++ R RS RDR
Sbjct: 340 ELKQEPEEKS---RERDRERDRDREKGEKDRDKD---RDRDRDRRRSHRDR 384



 Score = 34.3 bits (77), Expect = 0.29
 Identities = 16/52 (30%), Positives = 29/52 (55%)
 Frame = -1

Query: 606 EVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRA 451
           +V+     RD   R  + +RER+R +R RSR++     ++ +SR R  R ++
Sbjct: 208 DVNIRHSGRDDTSRYDERDRERERDRRERSREREKEPRERRRSRSRERRRKS 259



 Score = 33.9 bits (76), Expect = 0.38
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = -1

Query: 585 DRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRA 451
           D   R  + D ERERDR +R R R+K      + +SR R  + R+
Sbjct: 217 DDTSRYDERDRERERDRRERSREREKEPRERRRSRSRERRRKSRS 261



 Score = 33.5 bits (75), Expect = 0.50
 Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
 Frame = -1

Query: 612 EKEVDQEAX-DRDIRG--RDSDHERERDRAK-RHRSRDKSSGYSDKEKSRHRSSRDRA 451
           EK+ D++   DRD R   RD D E++RDR + R R RD+     DK+  R R   DR+
Sbjct: 364 EKDRDKDRDRDRDRRRSHRDRDREKDRDRDRDRRRDRDRDR-ERDKDHKRERDRGDRS 420



 Score = 32.3 bits (72), Expect = 1.1
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 8/61 (13%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDK--------SSGYSDKEKSRHRSSRD 457
           E++  + + +R+   R+    R R+R ++ RSR+K         S   DKEK +    RD
Sbjct: 230 ERDRRERSREREKEPRERRRSRSRERRRKSRSREKEERKRTREKSKDKDKEKDKDNKDRD 289

Query: 456 R 454
           R
Sbjct: 290 R 290



 Score = 32.0 bits (71), Expect = 1.5
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = -1

Query: 585 DRDIRGRDSDHERERDRAKRHRSRDK 508
           DRD R RD DH+RERDR  R   R++
Sbjct: 401 DRD-RERDKDHKRERDRGDRSEKREE 425



 Score = 31.6 bits (70), Expect = 1.9
 Identities = 20/61 (32%), Positives = 32/61 (52%)
 Frame = -1

Query: 606 EVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYYSSGDK 427
           E D+E  +RD R R  + E+E    +R RSR++      +EK   + +R++     S DK
Sbjct: 224 ERDRER-ERDRRERSREREKEPRERRRSRSRERRRKSRSREKEERKRTREK-----SKDK 277

Query: 426 D 424
           D
Sbjct: 278 D 278

---

>RU17_DROME (P17133) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70|
           kDa) (snRNP70)
          Length = 448

 Score = 38.9 bits (89), Expect = 0.012
 Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERD-RAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYYSS 436
           E+  + +  DR  R R+ D +RER+ + KR +SR++ S    +E+ R R  R+R G  S 
Sbjct: 297 ERYDEFDRRDRRDRERERDRDREREKKKKRSKSRERESSRERRERKRERRDRER-GTGSG 355

Query: 435 GD 430
           GD
Sbjct: 356 GD 357

---

>K0553_HUMAN (Q9UKJ3) Protein KIAA0553|
          Length = 1089

 Score = 38.5 bits (88), Expect = 0.016
 Identities = 22/59 (37%), Positives = 27/59 (45%)
 Frame = -1

Query: 600 DQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYYSSGDKD 424
           DQ    R     D  +    DR++RH  R   S  SD   S+HRS R +   YSS D D
Sbjct: 466 DQSCYSRQRSYSDDSYSDYSDRSRRHSKRSHDSDDSDYASSKHRSKRHK---YSSSDDD 521

---

>RU17_MOUSE (Q62376) U1 small nuclear ribonucleoprotein 70 kDa (U1 SNRNP 70|
           kDa) (snRNP70)
          Length = 448

 Score = 38.5 bits (88), Expect = 0.016
 Identities = 24/59 (40%), Positives = 32/59 (54%)
 Frame = -1

Query: 600 DQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYYSSGDKD 424
           D+      +  RD D +RER+R +R R RDK     ++E+ R R SRDR     S DKD
Sbjct: 220 DERPGPSPLPHRDRDRDRERERRERSRERDK-----ERERRRSR-SRDRRRRSRSRDKD 272



 Score = 35.8 bits (81), Expect = 0.10
 Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERER------DRAKRHRSRDKSSGYSDKEKSRHRSSRDR 454
           +++ D+E   R+ R R+ D ERER      DR +R RSRDK      +E+S+ +  RDR
Sbjct: 232 DRDRDRERERRE-RSRERDKERERRRSRSRDRRRRSRSRDKDERRRSRERSKDK-DRDR 288



 Score = 34.7 bits (78), Expect = 0.23
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = -1

Query: 609 KEVDQEAXDRDIRGRDSDHE-RERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRA 451
           +E D+E   R  R RD     R RD+ +R RSR++S       K R   SR+RA
Sbjct: 246 RERDKERERRRSRSRDRRRRSRSRDKDERRRSRERSKDKDRDRKRRSSRSRERA 299



 Score = 31.2 bits (69), Expect = 2.5
 Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 10/60 (16%)
 Frame = -1

Query: 573 RGRDSDHERER-----DRAK-----RHRSRDKSSGYSDKEKSRHRSSRDRAGYYSSGDKD 424
           R RD D ERER     +R K     R RSRD+      ++K   R SR+R     S DKD
Sbjct: 231 RDRDRDRERERRERSRERDKERERRRSRSRDRRRRSRSRDKDERRRSRER-----SKDKD 285

---

>DHX8_ARATH (Q38953) Probable pre-mRNA-splicing factor ATP-dependent RNA|
           helicase (EC 3.6.1.-)
          Length = 1168

 Score = 38.1 bits (87), Expect = 0.020
 Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 13/64 (20%)
 Frame = -1

Query: 612 EKEVDQEAX----------DRDIR--GRDSDHERERDR-AKRHRSRDKSSGYSDKEKSRH 472
           EKE+++EA           DRD R  GRD D +R RDR  +R R RD+     D+E    
Sbjct: 111 EKEIEREAEERRREEDRNRDRDRRESGRDRDRDRNRDRDDRRDRHRDRERNRGDEEGEDR 170

Query: 471 RSSR 460
           RS R
Sbjct: 171 RSDR 174

---

>RBM25_HUMAN (P49756) Probable RNA-binding protein 25 (RNA-binding motif protein|
           25) (RNA-binding region-containing protein 7) (Protein
           S164)
          Length = 784

 Score = 38.1 bits (87), Expect = 0.020
 Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRS-SRDR 454
           +KE +++  +++ R R+ + ERER+R +R R R++     +KEK R R   RDR
Sbjct: 238 KKEKERQEIEKERRERERERERERERRERERERERER-EREKEKERERERERDR 290



 Score = 37.4 bits (85), Expect = 0.035
 Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDR-AKRHRSRDKSSGYSDKEKSRHRS---SRDR 454
           EKE ++E      R RD   ER+RDR  +R R RD+    SD+ K R RS   SRDR
Sbjct: 277 EKEKERERERERDRDRDRTKERDRDRDRERDRDRDRERS-SDRNKDRSRSREKSRDR 332



 Score = 31.2 bits (69), Expect = 2.5
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGY 445
           EK  D+E      R R+ + ERER+R +      +     +K+K R R   +   Y
Sbjct: 327 EKSRDREREREREREREREREREREREREREREREREREREKDKKRDREEDEEDAY 382



 Score = 31.2 bits (69), Expect = 2.5
 Identities = 23/42 (54%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
 Frame = -1

Query: 585 DRDIRGRDSDHERER--DRAK-RHRSRDKSSGYSDKEKSRHR 469
           DRD R RD D +RER  DR K R RSR+KS    D+E+ R R
Sbjct: 301 DRD-RERDRDRDRERSSDRNKDRSRSREKS---RDRERERER 338



 Score = 31.2 bits (69), Expect = 2.5
 Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAK-----RHRSRDKSSGYSDKEKSRHRSSRDR 454
           E+E ++E  +R+ R R+ + ERER+R K     R R RD+     D+ K R R  RDR
Sbjct: 252 ERERERER-ERERREREREREREREREKEKERERERERDRD---RDRTKERDR-DRDR 304



 Score = 30.8 bits (68), Expect = 3.3
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDR---AKRHRSRDKSSGYSDKEKSRHRSS 463
           E+E ++E      + R+ + ER+RDR    +R R RD+     D+++ R RSS
Sbjct: 267 EREREREREREKEKERERERERDRDRDRTKERDRDRDRE---RDRDRDRERSS 316



 Score = 29.6 bits (65), Expect = 7.2
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDR-AKRHRSRDKSSGYSDKEKSRHRSSRDRA 451
           E+E ++E      R R+ + ERER++  KR R  D+   Y  ++  R    ++ A
Sbjct: 343 EREREREREREREREREREREREREKDKKRDREEDEEDAYERRKLERKLREKEAA 397

---

>ACINU_MOUSE (Q9JIX8) Apoptotic chromatin condensation inducer in the nucleus|
            (Acinus)
          Length = 1338

 Score = 37.7 bits (86), Expect = 0.027
 Identities = 18/51 (35%), Positives = 29/51 (56%)
 Frame = -1

Query: 609  KEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRD 457
            +++++E      R R+ D ERERDR  R R R++     D+++ R R  RD
Sbjct: 1272 RQLEREKRREHSRERERDRERERDRGDRERERER-----DRDRGRERDRRD 1317



 Score = 32.0 bits (71), Expect = 1.5
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -1

Query: 573  RGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRA 451
            R RD + ER+R   +R R RD+  G     +   R SR R+
Sbjct: 1286 RERDRERERDRGDRERERERDRDRGRERDRRDTKRHSRSRS 1326



 Score = 31.2 bits (69), Expect = 2.5
 Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
 Frame = -1

Query: 612  EKEVDQEAXDRDIRGRDSDHERERDRAK-RHRSRDKSSGYSDKEKSRHRSSRDRAG 448
            E+E D+E  +RD RG D + ERERDR + R R R  +  +S + +SR    RDR G
Sbjct: 1285 ERERDRER-ERD-RG-DRERERERDRDRGRERDRRDTKRHS-RSRSRSTPVRDRGG 1336

---

>ACINU_HUMAN (Q9UKV3) Apoptotic chromatin condensation inducer in the nucleus|
            (Acinus)
          Length = 1341

 Score = 37.7 bits (86), Expect = 0.027
 Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = -1

Query: 612  EKEVDQEAXDRDIRGRDSDHERERDRAK-RHRSRDKSSGYSDKEKSRHRS-SRDR 454
            EKE ++E   +  R +  +H RERDR + R R RD+     D+E+ R R   RDR
Sbjct: 1264 EKEAERERNRQLEREKRREHSRERDRERERERERDRGDRDRDRERDRERGRERDR 1318



 Score = 36.6 bits (83), Expect = 0.059
 Identities = 18/51 (35%), Positives = 29/51 (56%)
 Frame = -1

Query: 609  KEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRD 457
            +++++E      R RD + ERER+R +  R RD+     D+E+ R R  RD
Sbjct: 1273 RQLEREKRREHSRERDRERERERERDRGDRDRDRE---RDRERGRERDRRD 1320



 Score = 31.2 bits (69), Expect = 2.5
 Identities = 17/54 (31%), Positives = 25/54 (46%)
 Frame = -1

Query: 612  EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRA 451
            E+E  +E      R R+ + ER+R    R R RD+  G     +   R SR R+
Sbjct: 1276 EREKRREHSRERDRERERERERDRGDRDRDRERDRERGRERDRRDTKRHSRSRS 1329



 Score = 31.2 bits (69), Expect = 2.5
 Identities = 19/58 (32%), Positives = 30/58 (51%)
 Frame = -1

Query: 597  QEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYYSSGDKD 424
            +E  + + + R+ + ERER+R      R + S   D+E+ R R  RDR      GD+D
Sbjct: 1253 KEQEEEEQKEREKEAERERNRQLEREKRREHSRERDRERERER-ERDR------GDRD 1303



 Score = 30.4 bits (67), Expect = 4.2
 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = -1

Query: 609  KEVDQEAXDRDIRGR-DSDHERERDRAKRHRSRD-KSSGYSDKEKSRHRSSRDRAG 448
            +E D+E      R R D D +RERDR +R R RD + +    + +SR    RDR G
Sbjct: 1285 RERDRERERERERDRGDRDRDRERDR-ERGRERDRRDTKRHSRSRSRSTPVRDRGG 1339



 Score = 29.6 bits (65), Expect = 7.2
 Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
 Frame = -1

Query: 612  EKEVDQEAXDRDIRGRDSDHER----ERDRAKRH-RSRDKSSGYSDKEKSRHRSSRDR 454
            ++  +QE  ++  R ++++ ER    ER++ + H R RD+     ++E+ R R  RDR
Sbjct: 1250 KRRKEQEEEEQKEREKEAERERNRQLEREKRREHSRERDRE---RERERERDRGDRDR 1304

---

>K0853_HUMAN (Q5T200) Protein KIAA0853|
          Length = 1668

 Score = 37.7 bits (86), Expect = 0.027
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRS-SRDRA 451
           E+ VD+    RD R R+ D ERERDR +R R R++     D+E+ + R   R+RA
Sbjct: 662 ERRVDRVDDRRDERARERDRERERDR-ERERERERE---RDREREKERELERERA 712



 Score = 36.6 bits (83), Expect = 0.059
 Identities = 23/53 (43%), Positives = 30/53 (56%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDR 454
           EKE D+E      R RD DH+RER+   R R RD+     +KE+ R R  R+R
Sbjct: 720 EKERDRE------RDRDRDHDRERE---RERERDR-----EKEREREREERER 758



 Score = 36.6 bits (83), Expect = 0.059
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDR 454
           E+E+++E      R R+ + +RERDR + H    +     D+EK R R   +R
Sbjct: 704 ERELERERAREREREREKERDRERDRDRDHDRERERERERDREKEREREREER 756



 Score = 33.5 bits (75), Expect = 0.50
 Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
 Frame = -1

Query: 612 EKEVDQEAX---DRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDR 454
           E+E D+E     +R+ R R+ + ERER+R +R R R+++    DKE+ R R   D+
Sbjct: 740 ERERDREKEREREREERERERERERERER-ERERERERAR-ERDKERERQRDWEDK 793



 Score = 32.3 bits (72), Expect = 1.1
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = -1

Query: 594 EAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAG 448
           E   RD + R  D ER+R++  + RS   +  +     SRH SS  ++G
Sbjct: 291 EEKTRDGKDRGRDFERQREKRDKPRSTSPAGQHHSPISSRHHSSSSQSG 339



 Score = 32.0 bits (71), Expect = 1.5
 Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAK-RHRSRDKSSGYSDKEKSRHRSSRDR 454
           E+E D+E        R+   ERER+R K R R RD+   + D+E+ R R  RDR
Sbjct: 694 ERERDREREKERELERERAREREREREKERDRERDRDRDH-DRERERER-ERDR 745



 Score = 31.6 bits (70), Expect = 1.9
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDR 454
           E+E ++E      R R+   ER+++R ++    DK  G  D+ + R     DR
Sbjct: 759 ERERERERERERERERERARERDKERERQRDWEDKDKGRDDRREKREEIREDR 811



 Score = 31.6 bits (70), Expect = 1.9
 Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
 Frame = -1

Query: 600 DQEAXDRDIRGRDSDHERERDRAK-RHRSRDKSSGYSDKEKSRHR 469
           D+ A +RD R R+ D ERER+R + R R R+K     ++E++R R
Sbjct: 673 DERARERD-RERERDRERERERERERDREREKEREL-ERERARER 715



 Score = 31.2 bits (69), Expect = 2.5
 Identities = 17/54 (31%), Positives = 31/54 (57%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRA 451
           +++ D+E      R R+ + ERER+  +R R R++     ++E+ R R  R+RA
Sbjct: 730 DRDHDRERERERERDREKEREREREERERERERER-----ERERERER-ERERA 777



 Score = 30.0 bits (66), Expect = 5.6
 Identities = 20/53 (37%), Positives = 31/53 (58%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDR 454
           E+E D+E      R RD + E+ER+  +R R+R++     ++EK R R  RDR
Sbjct: 682 ERERDRERERERERERDREREKERE-LERERARERE---REREKERDR-ERDR 729

---

>DHX8_HUMAN (Q14562) ATP-dependent RNA helicase DHX8 (EC 3.6.1.-) (DEAH box|
           protein 8) (RNA helicase HRH1)
          Length = 1220

 Score = 37.7 bits (86), Expect = 0.027
 Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDR--AKRHRSRDKSSGYS---DKEKSRHRS-SRDRA 451
           +K+    + DR+ R RD D ER RDR   +RHRSR +S   +   +K KSR+RS SR ++
Sbjct: 172 KKKKRSRSRDRN-RDRDRDRERNRDRDHKRRHRSRSRSRSRTRERNKVKSRYRSRSRSQS 230

Query: 450 GYYSSGDKD 424
                 D+D
Sbjct: 231 PPKDRKDRD 239



 Score = 29.3 bits (64), Expect = 9.5
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -1

Query: 567 RDSDHERERDRAKRHRSRDKSSGYS-DKEKSRHRSSRDR 454
           RD++H     + KR RSRD++     D+E++R R  + R
Sbjct: 163 RDAEHRDRTKKKKRSRSRDRNRDRDRDRERNRDRDHKRR 201

---

>DDX23_PONPY (Q5RC67) Probable ATP-dependent RNA helicase DDX23 (EC 3.6.1.-)|
           (DEAD box protein 23)
          Length = 820

 Score = 37.7 bits (86), Expect = 0.027
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
 Frame = -1

Query: 594 EAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRA-GYYSSGDKD 424
           ++ +R+ R ++ + ++ERDR K+ R RDK     DK++ R   S  R   + S  D+D
Sbjct: 66  KSAERERRHKERERDKERDRNKKDRDRDKDGHRRDKDRKRSSLSPGRGKDFKSRKDRD 123



 Score = 34.7 bits (78), Expect = 0.23
 Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 10/60 (16%)
 Frame = -1

Query: 573 RGRDSDHERERDR---------AKRHRSRDKSSGYSDKEKSRHRS-SRDRAGYYSSGDKD 424
           R R  D ER+RDR          KRHRSRD+  G S + +SR RS S +R   +   ++D
Sbjct: 22  RSRTPDRERDRDRDRKSSPSKDRKRHRSRDRRRGGS-RSRSRSRSKSAERERRHKERERD 80



 Score = 32.0 bits (71), Expect = 1.5
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -1

Query: 573 RGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDR 454
           R + ++ ER     +R + RD++    D++K  HR  +DR
Sbjct: 64  RSKSAERERRHKERERDKERDRNKKDRDRDKDGHRRDKDR 103



 Score = 32.0 bits (71), Expect = 1.5
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAK-----RHRSRDKSSGYS--------DKEKSRH 472
           ++E D++   +    +D    R RDR +     R RSR KS+           DKE+ R+
Sbjct: 27  DRERDRDRDRKSSPSKDRKRHRSRDRRRGGSRSRSRSRSKSAERERRHKERERDKERDRN 86

Query: 471 RSSRDRAGYYSSGDKD 424
           +  RDR       DKD
Sbjct: 87  KKDRDRDKDGHRRDKD 102



 Score = 29.6 bits (65), Expect = 7.2
 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = -1

Query: 591 AXDRDIRGRDSDHERERDRA---KRHRSRDKSSGYSDKEKSRHRSSRDRAG 448
           A  +D     S  ER+R R    +R R RD+ S  S K++ RHRS   R G
Sbjct: 6   ADKKDRDASPSKEERKRSRTPDRERDRDRDRKSSPS-KDRKRHRSRDRRRG 55

---

>DDX23_HUMAN (Q9BUQ8) Probable ATP-dependent RNA helicase DDX23 (EC 3.6.1.-)|
           (DEAD box protein 23) (100 kDa U5 snRNP-specific
           protein) (U5-100kD) (PRP28 homolog)
          Length = 820

 Score = 37.7 bits (86), Expect = 0.027
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
 Frame = -1

Query: 594 EAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRA-GYYSSGDKD 424
           ++ +R+ R ++ + ++ERDR K+ R RDK     DK++ R   S  R   + S  D+D
Sbjct: 66  KSAERERRHKERERDKERDRNKKDRDRDKDGHRRDKDRKRSSLSPGRGKDFKSRKDRD 123



 Score = 34.7 bits (78), Expect = 0.23
 Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 10/60 (16%)
 Frame = -1

Query: 573 RGRDSDHERERDR---------AKRHRSRDKSSGYSDKEKSRHRS-SRDRAGYYSSGDKD 424
           R R  D ER+RDR          KRHRSRD+  G S + +SR RS S +R   +   ++D
Sbjct: 22  RSRTPDRERDRDRDRKSSPSKDRKRHRSRDRRRGGS-RSRSRSRSKSAERERRHKERERD 80



 Score = 32.0 bits (71), Expect = 1.5
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -1

Query: 573 RGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDR 454
           R + ++ ER     +R + RD++    D++K  HR  +DR
Sbjct: 64  RSKSAERERRHKERERDKERDRNKKDRDRDKDGHRRDKDR 103



 Score = 32.0 bits (71), Expect = 1.5
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAK-----RHRSRDKSSGYS--------DKEKSRH 472
           ++E D++   +    +D    R RDR +     R RSR KS+           DKE+ R+
Sbjct: 27  DRERDRDRDRKSSPSKDRKRHRSRDRRRGGSRSRSRSRSKSAERERRHKERERDKERDRN 86

Query: 471 RSSRDRAGYYSSGDKD 424
           +  RDR       DKD
Sbjct: 87  KKDRDRDKDGHRRDKD 102



 Score = 29.6 bits (65), Expect = 7.2
 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = -1

Query: 591 AXDRDIRGRDSDHERERDRA---KRHRSRDKSSGYSDKEKSRHRSSRDRAG 448
           A  +D     S  ER+R R    +R R RD+ S  S K++ RHRS   R G
Sbjct: 6   ADKKDRDASPSKEERKRSRTPDRERDRDRDRKSSPS-KDRKRHRSRDRRRG 55

---

>CPSF6_BRARE (Q6NWC6) Cleavage and polyadenylation specificity factor 6|
          Length = 545

 Score = 37.4 bits (85), Expect = 0.035
 Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
 Frame = -1

Query: 573 RGRDSDHERERDRAKRH--RSRDKSSGY---SDKEKSRHRSSRDR 454
           R R+ DH R R++++RH  RSRD+   Y     +E+ RHR  RDR
Sbjct: 487 RSRERDHSRSREKSRRHKSRSRDRHEDYYRERSRERDRHR-ERDR 530



 Score = 29.3 bits (64), Expect = 9.5
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -1

Query: 573 RGRDSDHERERDRAK-RHRSRDKSSGYSDKEKSRHRSSRDR 454
           R R  D+ RER R + RHR RD+     D+E+ R R    R
Sbjct: 508 RDRHEDYYRERSRERDRHRERDR-----DRERDREREREYR 543

---

>MOG5_CAEEL (Q09530) Probable pre-mRNA-splicing factor ATP-dependent RNA|
           helicase mog-5 (EC 3.6.1.-) (Sex determination protein
           mog-5) (Masculinization of germ line protein 5)
          Length = 1200

 Score = 37.4 bits (85), Expect = 0.035
 Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -1

Query: 585 DRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKE-KSRHRSSRDR 454
           DRD R R    E  RDR +R R RD+  G  D+    R R  RDR
Sbjct: 175 DRDRRRRSRSREDRRDRDRRDRDRDRDRGRGDRRGDDRQRDRRDR 219



 Score = 31.2 bits (69), Expect = 2.5
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHER------ERDRAKRHRSRD--KSSGYSDKEKSRHRSSRD 457
           +KE D +      R R  D +R      +RDR +R RSR+  +     D+++ R R   D
Sbjct: 147 QKESDSKRNRSRSRSRSRDRKRRRSRSGDRDRRRRSRSREDRRDRDRRDRDRDRDRGRGD 206

Query: 456 RAG 448
           R G
Sbjct: 207 RRG 209

---

>CWC25_ASPFU (Q4X1D7) Pre-mRNA-splicing factor cwc25|
          Length = 447

 Score = 37.4 bits (85), Expect = 0.035
 Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
 Frame = -1

Query: 597 QEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGY---SDKEKSRHRSSRDRAGYYSS 436
           Q   D+D   RD D ER RDR  R RSRD+   +     +++  HRS R R+  + S
Sbjct: 163 QHIRDKD---RDRDRERRRDRGDRDRSRDRDRSHRRSRHEDEDAHRSHRHRSHRHRS 216

---

>CPSF6_PONPY (Q5NVH8) Cleavage and polyadenylation specificity factor 6|
          Length = 552

 Score = 37.4 bits (85), Expect = 0.035
 Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
 Frame = -1

Query: 573 RGRDSDHERERDRAKRH--RSRDKSSGY---SDKEKSRHRSSRDR 454
           R R+ DH R R++++RH  RSRD+   Y     +E+ RHR  RDR
Sbjct: 494 RSRERDHSRSREKSRRHKSRSRDRHDDYYRERSRERERHR-DRDR 537

---

>CPSF6_MOUSE (Q6NVF9) Cleavage and polyadenylation specificity factor 6|
          Length = 551

 Score = 37.4 bits (85), Expect = 0.035
 Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
 Frame = -1

Query: 573 RGRDSDHERERDRAKRH--RSRDKSSGY---SDKEKSRHRSSRDR 454
           R R+ DH R R++++RH  RSRD+   Y     +E+ RHR  RDR
Sbjct: 493 RSRERDHSRSREKSRRHKSRSRDRHDDYYRERSRERERHR-DRDR 536

---

>CPSF6_HUMAN (Q16630) Cleavage and polyadenylation specificity factor 6|
           (Cleavage and polyadenylation specificity factor 68 kDa
           subunit) (CPSF 68 kDa subunit) (Pre-mRNA cleavage factor
           Im 68-kDa subunit) (Protein HPBRII-4/7)
          Length = 551

 Score = 37.4 bits (85), Expect = 0.035
 Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
 Frame = -1

Query: 573 RGRDSDHERERDRAKRH--RSRDKSSGY---SDKEKSRHRSSRDR 454
           R R+ DH R R++++RH  RSRD+   Y     +E+ RHR  RDR
Sbjct: 493 RSRERDHSRSREKSRRHKSRSRDRHDDYYRERSRERERHR-DRDR 536

---

>CPSF6_CHICK (Q5ZL34) Cleavage and polyadenylation specificity factor 6|
          Length = 551

 Score = 37.4 bits (85), Expect = 0.035
 Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
 Frame = -1

Query: 573 RGRDSDHERERDRAKRH--RSRDKSSGY---SDKEKSRHRSSRDR 454
           R R+ DH R R++++RH  RSRD+   Y     +E+ RHR  RDR
Sbjct: 493 RSRERDHSRSREKSRRHKSRSRDRHDDYYRERSRERERHR-DRDR 536

---

>CPSF6_XENLA (Q6DDW4) Cleavage and polyadenylation specificity factor 6|
          Length = 548

 Score = 37.4 bits (85), Expect = 0.035
 Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
 Frame = -1

Query: 573 RGRDSDHERERDRAKRH--RSRDKSSGY---SDKEKSRHRS-SRDR 454
           R R+ DH R R++++RH  RSRD+   Y     +E+ RHR   RDR
Sbjct: 490 RSRERDHSRSREKSRRHKSRSRDRHDDYYRERSRERERHRDRERDR 535

---

>CROP_PONPY (Q5R8W6) Cisplatin resistance-associated overexpressed protein|
          Length = 432

 Score = 37.0 bits (84), Expect = 0.045
 Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 10/63 (15%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRA------KRHRSRDK-SSGYSDKEKSR---HRSS 463
           EKE ++E  +R+ + R  + ERE++RA      KR RSR + SS  SD+  SR   H+ S
Sbjct: 258 EKEREREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRS 317

Query: 462 RDR 454
           R R
Sbjct: 318 RSR 320



 Score = 33.1 bits (74), Expect = 0.66
 Identities = 17/54 (31%), Positives = 31/54 (57%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRA 451
           ++ + +E  +R+ R    + ERER+R +R R R +     +KE++R R  R R+
Sbjct: 244 DERLKKEKQEREER----EKEREREREERERKRRREEEEREKERARDRERRKRS 293



 Score = 32.0 bits (71), Expect = 1.5
 Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
 Frame = -1

Query: 582 RDIRGRDSDHERERDRAKR-HRSRDKSSGYS---DKEKSRHRS-SRDRAGYYSSGDKD 424
           R  R RD    R  DR++R HRSR +    S   D++  +HRS SRDR     S +K+
Sbjct: 323 RRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEKE 380



 Score = 31.6 bits (70), Expect = 1.9
 Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
 Frame = -1

Query: 573 RGRDSDHERERDRAKRHRSRDKSSGYS-DKEKSRHRS-SRDR 454
           R RD    R R+R +R RSRD+    S D+ + +HRS SRDR
Sbjct: 310 RSRDHKRSRSRER-RRSRSRDRRRSRSHDRSERKHRSRSRDR 350



 Score = 30.0 bits (66), Expect = 5.6
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
 Frame = -1

Query: 573 RGRDSDHERERDRAK---RHRSRDKSSGYSDKEKSRHRSSRDRAGYYSSGDKD 424
           R RD    + RDR     R +SRD+      KEK + R S D+     SG ++
Sbjct: 346 RSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEKEK-RGSDDKKSSVKSGSRE 397

---

>CROP_MOUSE (Q5SUF2) Cisplatin resistance-associated overexpressed protein|
          Length = 432

 Score = 37.0 bits (84), Expect = 0.045
 Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 10/63 (15%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRA------KRHRSRDK-SSGYSDKEKSR---HRSS 463
           EKE ++E  +R+ + R  + ERE++RA      KR RSR + SS  SD+  SR   H+ S
Sbjct: 258 EKEREREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRS 317

Query: 462 RDR 454
           R R
Sbjct: 318 RSR 320



 Score = 33.1 bits (74), Expect = 0.66
 Identities = 21/42 (50%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
 Frame = -1

Query: 573 RGRDSDHERERDRAKRHRSRDKSSGYS-DKEKSRHRS-SRDR 454
           R RD    R RDR +R RSRD+    S D+ + +HRS SRDR
Sbjct: 310 RSRDHKRSRSRDR-RRSRSRDRRRSRSHDRSERKHRSRSRDR 350



 Score = 33.1 bits (74), Expect = 0.66
 Identities = 17/54 (31%), Positives = 31/54 (57%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRA 451
           ++ + +E  +R+ R    + ERER+R +R R R +     +KE++R R  R R+
Sbjct: 244 DERLKKEKQEREER----EKEREREREERERKRRREEEEREKERARDRERRKRS 293



 Score = 32.0 bits (71), Expect = 1.5
 Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
 Frame = -1

Query: 582 RDIRGRDSDHERERDRAKR-HRSRDKSSGYS---DKEKSRHRS-SRDRAGYYSSGDKD 424
           R  R RD    R  DR++R HRSR +    S   D++  +HRS SRDR     S +K+
Sbjct: 323 RRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEKE 380

---

>CROP_HUMAN (O95232) Cisplatin resistance-associated overexpressed protein|
           (cAMP regulatory element associated protein 1)
           (CRE-associated protein 1) (CREAP-1) (Luc7A) (Okadaic
           acid-inducible phosphoprotein OA48-18)
          Length = 432

 Score = 37.0 bits (84), Expect = 0.045
 Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 10/63 (15%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRA------KRHRSRDK-SSGYSDKEKSR---HRSS 463
           EKE ++E  +R+ + R  + ERE++RA      KR RSR + SS  SD+  SR   H+ S
Sbjct: 258 EKEREREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRS 317

Query: 462 RDR 454
           R R
Sbjct: 318 RSR 320



 Score = 33.1 bits (74), Expect = 0.66
 Identities = 17/54 (31%), Positives = 31/54 (57%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRA 451
           ++ + +E  +R+ R    + ERER+R +R R R +     +KE++R R  R R+
Sbjct: 244 DERLKKEKQEREER----EKEREREREERERKRRREEEEREKERARDRERRKRS 293



 Score = 32.0 bits (71), Expect = 1.5
 Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
 Frame = -1

Query: 582 RDIRGRDSDHERERDRAKR-HRSRDKSSGYS---DKEKSRHRS-SRDRAGYYSSGDKD 424
           R  R RD    R  DR++R HRSR +    S   D++  +HRS SRDR     S +K+
Sbjct: 323 RRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEKE 380



 Score = 31.6 bits (70), Expect = 1.9
 Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
 Frame = -1

Query: 573 RGRDSDHERERDRAKRHRSRDKSSGYS-DKEKSRHRS-SRDR 454
           R RD    R R+R +R RSRD+    S D+ + +HRS SRDR
Sbjct: 310 RSRDHKRSRSRER-RRSRSRDRRRSRSHDRSERKHRSRSRDR 350



 Score = 30.0 bits (66), Expect = 5.6
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
 Frame = -1

Query: 573 RGRDSDHERERDRAK---RHRSRDKSSGYSDKEKSRHRSSRDRAGYYSSGDKD 424
           R RD    + RDR     R +SRD+      KEK + R S D+     SG ++
Sbjct: 346 RSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEKEK-RGSDDKKSSVKSGSRE 397

---

>CROP_BOVIN (Q3SX41) Cisplatin resistance-associated overexpressed protein|
          Length = 432

 Score = 37.0 bits (84), Expect = 0.045
 Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 10/63 (15%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRA------KRHRSRDK-SSGYSDKEKSR---HRSS 463
           EKE ++E  +R+ + R  + ERE++RA      KR RSR + SS  SD+  SR   H+ S
Sbjct: 258 EKEREREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRS 317

Query: 462 RDR 454
           R R
Sbjct: 318 RSR 320



 Score = 33.1 bits (74), Expect = 0.66
 Identities = 17/54 (31%), Positives = 31/54 (57%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRA 451
           ++ + +E  +R+ R    + ERER+R +R R R +     +KE++R R  R R+
Sbjct: 244 DERLKKEKQEREER----EKEREREREERERKRRREEEEREKERARDRERRKRS 293



 Score = 32.0 bits (71), Expect = 1.5
 Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
 Frame = -1

Query: 582 RDIRGRDSDHERERDRAKR-HRSRDKSSGYS---DKEKSRHRS-SRDRAGYYSSGDKD 424
           R  R RD    R  DR++R HRSR +    S   D++  +HRS SRDR     S +K+
Sbjct: 323 RRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEKE 380



 Score = 31.6 bits (70), Expect = 1.9
 Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
 Frame = -1

Query: 573 RGRDSDHERERDRAKRHRSRDKSSGYS-DKEKSRHRS-SRDR 454
           R RD    R R+R +R RSRD+    S D+ + +HRS SRDR
Sbjct: 310 RSRDHKRSRSRER-RRSRSRDRRRSRSHDRSERKHRSRSRDR 350

---

>RU17_XENTR (Q66II8) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70|
           kDa) (snRNP70) (U1-70K)
          Length = 471

 Score = 37.0 bits (84), Expect = 0.045
 Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSR-HRSSRDR 454
           EK  D++      + RD D +R+RDR + HR R++     D+E+ R  R  RDR
Sbjct: 352 EKNRDRDRERDREKDRDKDRDRDRDRRRSHRDRERD---KDRERDRDRRRDRDR 402



 Score = 37.0 bits (84), Expect = 0.045
 Identities = 19/39 (48%), Positives = 24/39 (61%)
 Frame = -1

Query: 567 RDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRA 451
           RD D ERERDR +R R RDK     ++ +SR R  R R+
Sbjct: 222 RDRDRERERDRRERSRERDKE---RERRRSRSRERRRRS 257



 Score = 35.0 bits (79), Expect = 0.17
 Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
 Frame = -1

Query: 612 EKEVDQEAX-DRDIRGRDSDHERER------DRAKRHRSRDKSSGYSDKEKSRHRSSRDR 454
           E++ D+E   DR  R R+ D ERER      +R +R RSR+K      +E+SR +     
Sbjct: 221 ERDRDRERERDRRERSRERDKERERRRSRSRERRRRSRSREKEERKRSRERSRDKDKDKD 280

Query: 453 AGYYSSGDKD 424
                  DKD
Sbjct: 281 KDKDKEKDKD 290



 Score = 34.7 bits (78), Expect = 0.23
 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
 Frame = -1

Query: 585 DRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRS-SRDRAGYYSSGDKD 424
           D   R  + D +RER+R +R RSR++     DKE+ R RS SR+R     S +K+
Sbjct: 214 DDTSRYDERDRDRERERDRRERSRER-----DKERERRRSRSRERRRRSRSREKE 263



 Score = 32.0 bits (71), Expect = 1.5
 Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 6/59 (10%)
 Frame = -1

Query: 612 EKEVDQEAX-DRDIR----GRDSDHERERDRAKRHRSRDKSSGYSDKEKSR-HRSSRDR 454
           EK+ D++   DRD R     R+ D +RERDR +R R RD+     D+++ R H+  RDR
Sbjct: 364 EKDRDKDRDRDRDRRRSHRDRERDKDRERDRDRR-RDRDR-----DRDRDRDHKRERDR 416



 Score = 31.6 bits (70), Expect = 1.9
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = -1

Query: 585 DRDIRGRDSDHERERDRAKRHRSRDK 508
           DRD R RD DH+RERDR  R   R++
Sbjct: 401 DRD-RDRDRDHKRERDRGDRGEKREE 425



 Score = 31.2 bits (69), Expect = 2.5
 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 7/56 (12%)
 Frame = -1

Query: 597 QEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYS-------DKEKSRHRSSRDRA 451
           + +  R+ R R    E+E  +  R RSRDK            DK+K R R  R R+
Sbjct: 246 RRSRSRERRRRSRSREKEERKRSRERSRDKDKDKDKDKDKEKDKDKDRDRKRRSRS 301



 Score = 29.6 bits (65), Expect = 7.2
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRD-KSSGYSDKEKSRHR 469
           E+  D++      + ++ D +++RDR +R RSR+ K     D+EK   R
Sbjct: 270 ERSRDKDKDKDKDKDKEKDKDKDRDRKRRSRSRERKRERDRDREKKEDR 318



 Score = 29.6 bits (65), Expect = 7.2
 Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAK-RHRSRDKSSGYSDKEKSRHRSSRDR 454
           EKE  + + +R  R +D D ++++D+ K + + RD+      +E+ R R  RDR
Sbjct: 261 EKEERKRSRERS-RDKDKDKDKDKDKEKDKDKDRDRKRRSRSRERKRER-DRDR 312

---

>RU17_HUMAN (P08621) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70|
           kDa) (snRNP70) (U1-70K)
          Length = 437

 Score = 37.0 bits (84), Expect = 0.045
 Identities = 23/59 (38%), Positives = 32/59 (54%)
 Frame = -1

Query: 600 DQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYYSSGDKD 424
           D+      +  RD D +RER+R +R R RDK     ++E+ R R SRDR     S DK+
Sbjct: 220 DERPGPSPLPHRDRDRDRERERRERSRERDK-----ERERRRSR-SRDRRRRSRSRDKE 272



 Score = 35.8 bits (81), Expect = 0.10
 Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERER------DRAKRHRSRDKSSGYSDKEKSRHRSSRDR 454
           +++ D+E   R+ R R+ D ERER      DR +R RSRDK      +E+S+ +  RDR
Sbjct: 232 DRDRDRERERRE-RSRERDKERERRRSRSRDRRRRSRSRDKEERRRSRERSKDK-DRDR 288



 Score = 35.0 bits (79), Expect = 0.17
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = -1

Query: 609 KEVDQEAXDRDIRGRDSDHE-RERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRA 451
           +E D+E   R  R RD     R RD+ +R RSR++S       K R   SR+RA
Sbjct: 246 RERDKERERRRSRSRDRRRRSRSRDKEERRRSRERSKDKDRDRKRRSSRSRERA 299



 Score = 31.2 bits (69), Expect = 2.5
 Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 10/60 (16%)
 Frame = -1

Query: 573 RGRDSDHERER-----DRAK-----RHRSRDKSSGYSDKEKSRHRSSRDRAGYYSSGDKD 424
           R RD D ERER     +R K     R RSRD+      ++K   R SR+R     S DKD
Sbjct: 231 RDRDRDRERERRERSRERDKERERRRSRSRDRRRRSRSRDKEERRRSRER-----SKDKD 285

---

>PRP5_CRYNE (Q5KME7) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC|
           3.6.1.-)
          Length = 1072

 Score = 36.6 bits (83), Expect = 0.059
 Identities = 21/53 (39%), Positives = 29/53 (54%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDR 454
           E+E D+    RD R RD D++R RD+  R+R  D+     D +  R R  RDR
Sbjct: 54  ERERDRT---RDYRDRDRDYDRRRDK-DRYRDDDRDRRRRDDKDDRRREERDR 102



 Score = 33.1 bits (74), Expect = 0.66
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = -1

Query: 573 RGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHR-SSRDR 454
           R R+ D ERERDR + +R RD+      ++K R+R   RDR
Sbjct: 47  RDRERDRERERDRTRDYRDRDRDYD-RRRDKDRYRDDDRDR 86

---

>RU17_ARATH (Q42404) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70|
           kDa) (snRNP70) (U1-70K)
          Length = 427

 Score = 36.6 bits (83), Expect = 0.059
 Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 7/103 (6%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRA-------KRHRSRDKSSGYSDKEKSRHRSSRDR 454
           E+E  +E      R R+  HE+ R+R+       K HR RD+     D++  R R     
Sbjct: 264 EREKSREKGKERERSRELSHEQPRERSRDRPREDKHHRDRDQGGRDRDRDSRRDRDRTRD 323

Query: 453 AGYYSSGDKDXXXXXXXXXXXSVL*EHPQREHEGPDGA*EGSG 325
            G     D+D                  +R++EG +   EG G
Sbjct: 324 RGDRDRRDRDRGRDRTSRDHDRDRSRKKERDYEGGEYEHEGGG 366



 Score = 29.6 bits (65), Expect = 7.2
 Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 15/78 (19%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKE-------KSRHRSSRDR 454
           +++  ++  DRD R RD   +R      R RSR K   Y   E       +SR R +  R
Sbjct: 317 DRDRTRDRGDRDRRDRDRGRDRTSRDHDRDRSRKKERDYEGGEYEHEGGGRSRERDAEYR 376

Query: 453 A------GYY--SSGDKD 424
                  GYY    GD D
Sbjct: 377 GEPEETRGYYEDDQGDTD 394

---

>FIP1_HUMAN (Q6UN15) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)|
           (Factor interacting with PAP) (hFip1) (Rearranged in
           hypereosinophilia)
          Length = 594

 Score = 36.6 bits (83), Expect = 0.059
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAK-RHRSRDKSSG----YSDKEKSRHRSSRDRAG 448
           EK+ D+E  DRD R RD D +RER+R + R R RD S       SD+E+ R+R   +R G
Sbjct: 458 EKDRDRER-DRD-RERDRDRDRERERTRERERERDHSPTPSVFNSDEERYRYREYAER-G 514

Query: 447 Y 445
           Y
Sbjct: 515 Y 515



 Score = 30.0 bits (66), Expect = 5.6
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -1

Query: 555 HERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRA 451
           H   R++ +RHR R     + +KE++RH+SSR  +
Sbjct: 518 HRASREKEERHRERR----HREKEETRHKSSRSNS 548

---

>RSP7_CAEEL (O01159) Probable splicing factor, arginine/serine-rich 7 (p54)|
          Length = 452

 Score = 36.6 bits (83), Expect = 0.059
 Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
 Frame = -1

Query: 582 RDIRGRDSDHERERDRA--KRHRSRDKSSGYSDKEKSRHRSSRDRAGYYSSGDKD 424
           RD R RD D +R+R R+  +R RSRD+     D+++SR R  + R+    + D+D
Sbjct: 290 RDSRDRDRDRDRDRRRSRDRRSRSRDRDRD-RDRKRSRSRDRKRRSRSRDNKDRD 343



 Score = 36.2 bits (82), Expect = 0.077
 Identities = 21/45 (46%), Positives = 26/45 (57%)
 Frame = -1

Query: 585 DRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRA 451
           DRD R RD    R RDR +R RSRD      D+++SR R  R R+
Sbjct: 315 DRD-RDRDRKRSRSRDRKRRSRSRDNKD--RDRKRSRSRDRRRRS 356



 Score = 34.3 bits (77), Expect = 0.29
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 9/57 (15%)
 Frame = -1

Query: 597 QEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYS---------DKEKSRHRSSRDR 454
           + +  RD + RD    R RDR +R +SRD+    S         DK++SR RS   R
Sbjct: 332 RRSRSRDNKDRDRKRSRSRDRRRRSKSRDRKRERSRSRSKDRKRDKKRSRSRSPEKR 388



 Score = 34.3 bits (77), Expect = 0.29
 Identities = 22/44 (50%), Positives = 29/44 (65%), Gaps = 4/44 (9%)
 Frame = -1

Query: 573 RGRDS-DHERERDRAKRHRSRDKSSGYSDKEKSRHRS---SRDR 454
           R RDS D +R+RDR +R RSRD+ S   D+++ R R    SRDR
Sbjct: 288 RRRDSRDRDRDRDRDRR-RSRDRRSRSRDRDRDRDRKRSRSRDR 330

---

>FIP1_PONPY (Q5RAA7) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)|
          Length = 588

 Score = 36.6 bits (83), Expect = 0.059
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAK-RHRSRDKSSG----YSDKEKSRHRSSRDRAG 448
           EK+ D+E  DRD R RD D +RER+R + R R RD S       SD+E+ R+R   +R G
Sbjct: 452 EKDRDRER-DRD-RERDRDRDRERERTRERERERDHSPTPSVFNSDEERYRYREYAER-G 508

Query: 447 Y 445
           Y
Sbjct: 509 Y 509



 Score = 30.0 bits (66), Expect = 5.6
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -1

Query: 555 HERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRA 451
           H   R++ +RHR R     + +KE++RH+SSR  +
Sbjct: 512 HRASREKEERHRERR----HREKEETRHKSSRSNS 542

---

>RBM5_HUMAN (P52756) RNA-binding protein 5 (RNA-binding motif protein 5)|
           (Putative tumor suppressor LUCA15) (G15 protein)
           (NY-REN-9 antigen)
          Length = 815

 Score = 36.2 bits (82), Expect = 0.077
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = -1

Query: 600 DQEAXDRDIRGRDSDHERERDRAKRHRSRD-KSSGYSDKEKSRHRSSRDRAGYYSSGD 430
           D++  +   R RDSD++R  D  +  R  D +     ++E+ R  S R   GY+S GD
Sbjct: 24  DRDERESRSRRRDSDYKRSSDDRRGDRYDDYRDYDSPERERERRNSDRSEDGYHSDGD 81

---

>U2AF2_CAEBR (P90727) Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor|
           65 kDa subunit) (U2 snRNP auxiliary factor large
           subunit) (U2AF65)
          Length = 488

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 19/38 (50%), Positives = 23/38 (60%)
 Frame = -1

Query: 567 RDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDR 454
           RD D E   DR KR RSR +  G  D+++SR R  RDR
Sbjct: 48  RDRDDE---DRKKRKRSRSRDRGDRDRKRSRSRDRRDR 82



 Score = 32.0 bits (71), Expect = 1.5
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAG 448
           +++  + +  RD   RD    R RDR  R RSR +      +++SR R+  DR G
Sbjct: 54  DRKKRKRSRSRDRGDRDRKRSRSRDRRDRDRSRSRE---RRRDRSRDRNRDDRRG 105



 Score = 29.6 bits (65), Expect = 7.2
 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
 Frame = -1

Query: 606 EVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHR---SSRDRAGYYSS 436
           E  ++  D D + R     R+R    R RSR +     D+ +SR R    SRDR      
Sbjct: 45  EEKRDRDDEDRKKRKRSRSRDRGDRDRKRSRSRDRRDRDRSRSRERRRDRSRDRNRDDRR 104

Query: 435 GDKD 424
           G +D
Sbjct: 105 GGRD 108

---

>NELFE_HUMAN (P18615) Negative elongation factor E (NELF-E) (RD protein)|
          Length = 380

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAK-RHRSRDKSSGYSDKEKSRHRSSRDRAGYYSS 436
           E+  D++      R RD D +RERDR + R R RD+     D+++ R R  RDR G +  
Sbjct: 193 ERNRDRDRDRERDRDRDRDRDRERDRDRDRDRDRDRE---RDRDRERDR-DRDREGPFRR 248

Query: 435 GD 430
            D
Sbjct: 249 SD 250



 Score = 32.7 bits (73), Expect = 0.86
 Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -1

Query: 573 RGRDSDHERERDRAK-RHRSRDKSSGYSDKEKSRHRSSRDR 454
           R RD  HER RDR + R R RD+     D+E+ R R  RDR
Sbjct: 186 RSRDRSHERNRDRDRDRERDRDRDRD-RDRERDRDR-DRDR 224

---

>PRP5_YARLI (Q6CCZ1) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC|
           3.6.1.-)
          Length = 974

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAK---RHRSRDKSSGYSDKEKSRHRSSRDRA 451
           ++  D+    RD+R RD D +R+R+R +   R   RD+    S + + R   SRDR+
Sbjct: 27  DRSRDERDRFRDVRDRDRDRDRDRERDRGGYRQDPRDRRYSRSRERERRGSGSRDRS 83

---

>U2AFM_HUMAN (Q15696) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa|
           subunit related-protein 2 (U2(RNU2) small nuclear RNA
           auxillary factor 1-like 2) (NY-REN-20 antigen)
          Length = 482

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = -1

Query: 573 RGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRA-GYYSSGDKD 424
           RGR+ D  R+R R +  RSR +S     +      SSR R+ G   SG++D
Sbjct: 423 RGRNRDRSRDRSRGRGSRSRSRSRSRRSRRSRSQSSSRSRSRGRRRSGNRD 473



 Score = 34.3 bits (77), Expect = 0.29
 Identities = 19/57 (33%), Positives = 29/57 (50%)
 Frame = -1

Query: 597 QEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYYSSGDK 427
           +++  R  + R+  + R R R  R RSRD+S G   + +SR RS R R     S  +
Sbjct: 405 KKSHKRTSKSRERHNSRSRGR-NRDRSRDRSRGRGSRSRSRSRSRRSRRSRSQSSSR 460

---

>RBM16_HUMAN (Q9UPN6) Putative RNA-binding protein 16 (RNA-binding motif protein|
           16)
          Length = 1271

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRA-KRHRSRDKSSGYSDKEKSRHRS-SRDR 454
           E+  +QEA    +R R   H R R R+ ++ RSR +S     K + R RS SR+R
Sbjct: 384 EEVFEQEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRER 438

---

>DDX3Y_PANTR (Q6GVM6) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box|
           protein 3, Y-chromosomal)
          Length = 660

 Score = 34.7 bits (78), Expect = 0.23
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRH-----RSRDKSSGYSDKEKSRHRSSRDRAG 448
           + E+DQ+  + D+          R    R+     R+R+ S G+ DK+ S    S+D+  
Sbjct: 9   DPELDQQLANLDLNSEKQSGGASRASKGRYIPPHLRNREASKGFHDKDSSGWSCSKDKDA 68

Query: 447 YYSSGDKD 424
           Y S G +D
Sbjct: 69  YNSFGSRD 76

---

>CWC25_NEUCR (Q7SI59) Pre-mRNA-splicing factor cwc-25|
          Length = 444

 Score = 34.7 bits (78), Expect = 0.23
 Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 12/61 (19%)
 Frame = -1

Query: 600 DQEAXDRDIRGRDSDHERERDRAKRHR---SRDKSSGYS---------DKEKSRHRSSRD 457
           D+     D R RDS  +R+RDR  R R   SRD+S   S         D+ K R R S D
Sbjct: 199 DRHRDRDDDRDRDSARDRDRDRHSRRRRSDSRDRSRSRSPRRRSDSEEDRSKQRRRDSPD 258

Query: 456 R 454
           R
Sbjct: 259 R 259



 Score = 29.3 bits (64), Expect = 9.5
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
 Frame = -1

Query: 585 DRDIRGRDSDHERERDRAKRHR-----SRDKSSGYSDKEKSRHRSSRDRAGYYSSGDKD 424
           DRD      + +R+ DR++RHR     SR +S     +   R   SR+R     S  +D
Sbjct: 264 DRDQSRSRGNRDRDDDRSRRHRFPQGRSRSRSGSPGGRSSRRREYSRERDSGGPSSRRD 322

---

>BRE1A_MOUSE (Q5DTM8) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING|
           finger protein 20)
          Length = 973

 Score = 34.7 bits (78), Expect = 0.23
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDR 454
           E+E  ++  +R+ R R+ + ERER++ K   S  +     DKEK +H   R +
Sbjct: 568 ERERREKERERE-REREKEKEREREKQKLKESEKERDSVKDKEKGKHDDGRKK 619

---

>LC7L2_MOUSE (Q7TNC4) Putative RNA-binding protein Luc7-like 2 (CGI-74 homolog)|
          Length = 392

 Score = 34.7 bits (78), Expect = 0.23
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = -1

Query: 573 RGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRA 451
           R R S  +R R+R+KR  S+++        + R RSSRDR+
Sbjct: 318 RSRHSSRDRSRERSKRRSSKERFRDQDLASRDRDRSSRDRS 358



 Score = 32.0 bits (71), Expect = 1.5
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = -1

Query: 573 RGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYYSSGDK 427
           R R     RER R  R +SR+K   +  +  SR RS   +   +SS D+
Sbjct: 278 RHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDR 326



 Score = 30.4 bits (67), Expect = 4.2
 Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 18/59 (30%)
 Frame = -1

Query: 573 RGRDSDHERERDRA---------------KRHRSRDKSSGYS---DKEKSRHRSSRDRA 451
           R R  +H R R R+               KRHR R +SS  S     ++SRH SSRDR+
Sbjct: 270 RSRSREHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRH-SSRDRS 327

---

>NELFE_MOUSE (P19426) Negative elongation factor E (NELF-E) (RD protein)|
          Length = 375

 Score = 34.7 bits (78), Expect = 0.23
 Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
 Frame = -1

Query: 612 EKEVDQEAX-DRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYYSS 436
           +KE D++   DRD R RD D +R+RDR  R + RD+     D+++ R R  RDR G +  
Sbjct: 201 DKERDRDRDRDRD-RDRDKDKDRDRDR-DRDKERDR-----DRDRDRDR-ERDREGPFRR 252

Query: 435 GD 430
            D
Sbjct: 253 SD 254



 Score = 31.2 bits (69), Expect = 2.5
 Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = -1

Query: 573 RGRDSDHERERDR---AKRHRSRDKSSGYS-DKEKSRHRSSRDR 454
           R RD  H+R RDR    +R R RD+      DK+K R R  RDR
Sbjct: 186 RSRDRSHDRSRDRDRDKERDRDRDRDRDRDRDKDKDRDR-DRDR 228

---

>PPIL4_USTMA (P0C196) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)|
           (PPIase) (Rotamase)
          Length = 551

 Score = 34.7 bits (78), Expect = 0.23
 Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSR-DKSSGYSDKEKSRHRSSR 460
           ++  ++   DRD   RD D +R+RDR + HR R +    + D+++SR  S R
Sbjct: 503 DRRSERSRHDRD---RDRDRDRDRDREREHRRRTEDRRRHDDRQRSRDGSRR 551



 Score = 30.0 bits (66), Expect = 5.6
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -1

Query: 567 RDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDR 454
           RD D   ER R  R R RD+     D+E+   R + DR
Sbjct: 500 RDEDRRSERSRHDRDRDRDRDRD-RDREREHRRRTEDR 536

---

>STC_DROME (P40798) Protein shuttle craft|
          Length = 1106

 Score = 34.3 bits (77), Expect = 0.29
 Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
 Frame = -1

Query: 612 EKEVDQEAX-DRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSR-DRAGYYS 439
           E+E ++E   DRD R RD D +R+RDR  R R RD+ S   +  + R    R DR   Y 
Sbjct: 234 ERERERERDRDRD-RERDRDRDRDRDR-DRDRDRDRDSRPGNTRQQRRSDYRDDREDRYE 291

Query: 438 SGDK 427
             D+
Sbjct: 292 RSDR 295



 Score = 31.6 bits (70), Expect = 1.9
 Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRH-RSSRDR 454
           ++E D++  DRD R RD D +R+RD    +  + + S Y D  + R+ RS R R
Sbjct: 246 DRERDRDR-DRD-RDRDRDRDRDRDSRPGNTRQQRRSDYRDDREDRYERSDRRR 297



 Score = 29.3 bits (64), Expect = 9.5
 Identities = 19/48 (39%), Positives = 27/48 (56%)
 Frame = -1

Query: 597 QEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDR 454
           QE  +R    + S+H  ER+R +R R RD+     D+E+ R R  RDR
Sbjct: 217 QEPAERGANNQCSNHNYERER-ERERDRDR-----DRERDRDR-DRDR 257

---

>CACB2_HUMAN (Q08289) Voltage-dependent L-type calcium channel beta-2 subunit|
           (CAB2) (Calcium channel, voltage-dependent, beta 2
           subunit) (Lambert-Eaton myasthenic syndrome antigen B)
           (MYSB)
          Length = 660

 Score = 34.3 bits (77), Expect = 0.29
 Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
 Frame = -1

Query: 603 VDQEAXDRDIRGRDSDH--ERERDRAKRHRSRD----KSSGYSDKEKSRHRSSRDR 454
           VD  A  RD   RD  H     R R  RHRSRD    +     +K++SRH+ S+DR
Sbjct: 579 VDHYASHRDHNHRDETHGSSDHRHRESRHRSRDVDREQDHNECNKQRSRHK-SKDR 633

---

>BRE1A_HUMAN (Q5VTR2) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING|
           finger protein 20)
          Length = 975

 Score = 34.3 bits (77), Expect = 0.29
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDR 454
           E+E  ++  +R+ R R+ + ERER++ K   S  +     DKEK +H   R +
Sbjct: 570 ERERREKERERE-REREKEKEREREKQKLKESEKERDSAKDKEKGKHDDGRKK 621



 Score = 30.0 bits (66), Expect = 5.6
 Identities = 14/57 (24%), Positives = 25/57 (43%)
 Frame = -1

Query: 597 QEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYYSSGDK 427
           ++  +R+   R+ + ERER+R K      +     + EK R  +     G +  G K
Sbjct: 564 RDEEERERERREKEREREREREKEKEREREKQKLKESEKERDSAKDKEKGKHDDGRK 620



 Score = 30.0 bits (66), Expect = 5.6
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = -1

Query: 579 DIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSR 460
           +I+ +  + ERER+R ++ R R++     +KEK R R  +
Sbjct: 559 EIKSKRDEEERERERREKERERERE---REKEKEREREKQ 595

---

>TRSF_DROME (P11596) Female-specific protein transformer|
          Length = 197

 Score = 34.3 bits (77), Expect = 0.29
 Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
 Frame = -1

Query: 567 RDSDHERERDRAK-RHRSRDKSSGYSDKEKSRHRSSRDR 454
           R+S H R R R++ R+RSR +SS    +++SR RSS  R
Sbjct: 82  RESRHRRHRQRSRSRNRSRSRSSERKRRQRSRSRSSERR 120



 Score = 32.0 bits (71), Expect = 1.5
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 15/69 (21%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRD------SDHERERDRAKR---------HRSRDKSSGYSDKEKS 478
           E+E    + +RD R ++      +D  RE+DR +R          R+R +S   S   +S
Sbjct: 25  EREYHGRSSERDSRKKEHKIPYFADEVREQDRLRRLRQRAHQSTRRTRSRSRSQSSIRES 84

Query: 477 RHRSSRDRA 451
           RHR  R R+
Sbjct: 85  RHRRHRQRS 93

---

>CWC25_EMENI (Q5B0I1) Pre-mRNA-splicing factor cwc25|
          Length = 415

 Score = 34.3 bits (77), Expect = 0.29
 Identities = 21/77 (27%), Positives = 29/77 (37%)
 Frame = -1

Query: 573 RGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYYSSGDKDXXXXXXXXXX 394
           +GR+   ERER+R  RHR    +  +      R   SR R+      D+           
Sbjct: 168 QGRERHQERERERGHRHRRDSGNDSHRSHRHRRRSRSRSRSPRVEKDDRRHRDR------ 221

Query: 393 XSVL*EHPQREHEGPDG 343
                EH +R H   DG
Sbjct: 222 -----EHDRRSHRDRDG 233



 Score = 32.0 bits (71), Expect = 1.5
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = -1

Query: 579 DIRGRDSDHERERDRAKRHRSRD-KSSGYSDKEKSRHRSSRDRAGYYSSGDKD 424
           D R RD D +  RDR  R   RD +SS   D +      +RDR  +  +G+ D
Sbjct: 274 DRRDRDQDQDYRRDRNSRSSRRDARSSRDRDTDAFGRDRNRDRGSHSRNGNAD 326



 Score = 32.0 bits (71), Expect = 1.5
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
 Frame = -1

Query: 600 DQEAXDRDIRGRDSDHERERDRAKRHR----SRDKSSGYSDKEKSRHRSSRDRAG 448
           D+   DR  R +D D+ R+R+     R    SRD+ +    ++++R R S  R G
Sbjct: 269 DRRRDDRRDRDQDQDYRRDRNSRSSRRDARSSRDRDTDAFGRDRNRDRGSHSRNG 323

---

>ENT1_SCHPO (O74423) Epsin-1|
          Length = 706

 Score = 34.3 bits (77), Expect = 0.29
 Identities = 17/60 (28%), Positives = 29/60 (48%)
 Frame = -1

Query: 603 VDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYYSSGDKD 424
           ++ E   ++ RG   + +R+RDR +  R  D     +  E+SR   +  RA  Y   D+D
Sbjct: 136 LEDEHALKEARGDSRERDRDRDRTRSSRFDDDDDDRAPYEESRLSRAPSRASRYDDDDRD 195

---

>RED_HUMAN (Q13123) Protein Red (Protein RER) (IK factor) (Cytokine IK)|
          Length = 557

 Score = 34.3 bits (77), Expect = 0.29
 Identities = 23/47 (48%), Positives = 30/47 (63%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRH 472
           E+E D+E  DRD   RD + ERERDR +R R RD+     ++EK RH
Sbjct: 343 ERERDRER-DRD---RDRERERERDR-ERERERDRE---REEEKKRH 381

---

>DIDO1_HUMAN (Q9BTC0) Death-inducer obliterator 1 (DIO-1) (Death-associated|
            transcription factor 1) (DATF-1) (hDido1)
          Length = 2240

 Score = 34.3 bits (77), Expect = 0.29
 Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = -1

Query: 609  KEVDQEAXDRDIRGRDSDHERERDRAK-RHRSRDKSSGYSDKEKSRHRSSRDRA 451
            KE D+       R R+ D  R+RDR++ R R RDK+    D+E+ R R  R ++
Sbjct: 2167 KEWDRSRERSRNRERERDRRRDRDRSRSRERDRDKA---RDRERGRDRKDRSKS 2217



 Score = 30.4 bits (67), Expect = 4.2
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
 Frame = -1

Query: 612  EKEVDQEAXDRDIRGRDSDHERERDRAK-----RHRSRDKS-SGYSDKEKSRHRS-SRDR 454
            E+  +++      RG++ D  RER R +     R R RD+S S   D++K+R R   RDR
Sbjct: 2152 ERSANRDREREADRGKEWDRSRERSRNRERERDRRRDRDRSRSRERDRDKARDRERGRDR 2211

---

>RSP6_CAEEL (Q18409) Probable splicing factor, arginine/serine-rich 6|
           (RNA-binding protein srp-1) (CeSRp20)
          Length = 179

 Score = 34.3 bits (77), Expect = 0.29
 Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
 Frame = -1

Query: 573 RGRDSDHERERDRAKRHRSRDKS---SGYSDKEKSRHRSSRDR 454
           RGRD   +R RDR+ R RSRD+S   S   ++ +SR RS ++R
Sbjct: 115 RGRDRSRDRSRDRS-RDRSRDRSRERSRERERTRSRSRSPQER 156

---

>TR150_XENLA (Q5BJ39) Thyroid hormone receptor-associated protein 3 (Thyroid|
           hormone receptor-associated protein complex 150 kDa
           component) (Trap150)
          Length = 951

 Score = 33.9 bits (76), Expect = 0.38
 Identities = 18/62 (29%), Positives = 31/62 (50%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYYSSG 433
           E+++ +      +  RDS H RER   K  ++   S     K++ +HR +RDR+   SS 
Sbjct: 726 ERDLKRGKSRESVDSRDSSHSRERSTEKTEKTHKGS-----KKQKKHRRARDRSRSSSSS 780

Query: 432 DK 427
            +
Sbjct: 781 SQ 782

---

>TR150_RAT (Q5M7V8) Thyroid hormone receptor-associated protein 3 (Thyroid|
           hormone receptor-associated protein complex 150 kDa
           component) (Trap150)
          Length = 951

 Score = 33.9 bits (76), Expect = 0.38
 Identities = 18/62 (29%), Positives = 31/62 (50%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYYSSG 433
           E+++ +      +  RDS H RER   K  ++   S     K++ +HR +RDR+   SS 
Sbjct: 726 ERDLKRGKSRESVDSRDSSHSRERSTEKTEKTHKGS-----KKQKKHRRARDRSRSSSSS 780

Query: 432 DK 427
            +
Sbjct: 781 SQ 782

---

>TR150_MOUSE (Q569Z6) Thyroid hormone receptor-associated protein 3 (Thyroid|
           hormone receptor-associated protein complex 150 kDa
           component) (Trap150)
          Length = 951

 Score = 33.9 bits (76), Expect = 0.38
 Identities = 18/62 (29%), Positives = 31/62 (50%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYYSSG 433
           E+++ +      +  RDS H RER   K  ++   S     K++ +HR +RDR+   SS 
Sbjct: 726 ERDLKRGKSRESVDSRDSSHSRERSTEKTEKTHKGS-----KKQKKHRRARDRSRSSSSS 780

Query: 432 DK 427
            +
Sbjct: 781 SQ 782

---

>CWC25_YARLI (Q6C1V6) Pre-mRNA-splicing factor CWC25|
          Length = 561

 Score = 33.9 bits (76), Expect = 0.38
 Identities = 21/52 (40%), Positives = 29/52 (55%)
 Frame = -1

Query: 609 KEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDR 454
           +E    +  RD R R+   ER RDR++  RSRD+S     +E+ R R  RDR
Sbjct: 249 REEGGRSRSRD-RYRNRSRERYRDRSREERSRDRS-----RERLRSRRDRDR 294



 Score = 31.6 bits (70), Expect = 1.9
 Identities = 20/51 (39%), Positives = 26/51 (50%)
 Frame = -1

Query: 585 DRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYYSSG 433
           DR    R  D  RER R++R R RD+     D+++ R    RDR    SSG
Sbjct: 271 DRSREERSRDRSRERLRSRRDRDRDR-----DRDRDR---DRDRDNVQSSG 313



 Score = 30.4 bits (67), Expect = 4.2
 Identities = 22/47 (46%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = -1

Query: 585 DRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKS--RHRSSRDRA 451
           DRD R RD D +R+RDR    +S  +SSG S    S    RS RDR+
Sbjct: 291 DRD-RDRDRDRDRDRDR-DNVQSSGRSSGRSSVRSSARSERSLRDRS 335



 Score = 30.0 bits (66), Expect = 5.6
 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
 Frame = -1

Query: 597 QEAXDRDIRGRDSDHERERDRAKR--------HRSRDKSSGYSDKEKSRHRSSRDRAGYY 442
           +++ DR  R RD + E ER R +R         R+RD S   SD ++   +SSR+     
Sbjct: 188 EDSRDRRNR-RDMEREGERRRRRRDGERTRRRERNRDPSPSVSDDDRGYRQSSREERDRK 246

Query: 441 SSGDK 427
           SS ++
Sbjct: 247 SSREE 251

---

>CCNL1_MOUSE (Q52KE7) Cyclin-L1 (Cyclin-L) (Cyclin Ania-6a)|
          Length = 532

 Score = 33.9 bits (76), Expect = 0.38
 Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRG--RDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYYS 439
           E E  Q+A      G  +DS   R    A R RSR +S   S   +  + + R R+G YS
Sbjct: 370 EPEDRQQASKSPYNGVRKDSKRSRTSRSASRSRSRTRSRSRSHSPRRHYNNRRSRSGTYS 429

Query: 438 SGDKDXXXXXXXXXXXSVL*EHPQREH 358
           S  +                E P+R H
Sbjct: 430 SRSRSRSRSHS---------ESPRRHH 447

---

>CACB2_RABIT (P54288) Voltage-dependent L-type calcium channel beta-2 subunit|
           (CAB2) (Calcium channel, voltage-dependent, beta 2
           subunit)
          Length = 632

 Score = 33.9 bits (76), Expect = 0.38
 Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
 Frame = -1

Query: 609 KEVDQEAXDRDIRGRDSDHERE--RDRAKRHRSRD----KSSGYSDKEKSRHRSSRDR 454
           + VD  A  RD   RD  H     R R  RHRSRD    +     +K++SRH+ S+DR
Sbjct: 549 EHVDHYAPHRDHNHRDETHRSSDHRHRETRHRSRDMDREQDHNECNKQRSRHK-SKDR 605

---

>DHX15_MOUSE (O35286) Putative pre-mRNA-splicing factor ATP-dependent RNA|
           helicase DHX15 (EC 3.6.1.-) (DEAH box protein 15)
          Length = 795

 Score = 33.9 bits (76), Expect = 0.38
 Identities = 18/41 (43%), Positives = 22/41 (53%)
 Frame = -1

Query: 585 DRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSS 463
           DRD   R  D +RERDR  R R R+K     +KEK    S+
Sbjct: 30  DRDREDRSKDRDRERDRGDREREREK-----EKEKELRAST 65



 Score = 31.2 bits (69), Expect = 2.5
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -1

Query: 558 DHERERDRAKRHRSRDKSSGYSDKEKSRHR 469
           D ER+RDR  R + RD+     D+E+ R +
Sbjct: 26  DRERDRDREDRSKDRDRERDRGDREREREK 55



 Score = 29.3 bits (64), Expect = 9.5
 Identities = 10/40 (25%), Positives = 23/40 (57%)
 Frame = -1

Query: 570 GRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRA 451
           G+D + +R+R+   + R R++  G  ++E+ + +    RA
Sbjct: 24  GKDRERDRDREDRSKDRDRERDRGDREREREKEKEKELRA 63

---

>DHX15_HUMAN (O43143) Putative pre-mRNA-splicing factor ATP-dependent RNA|
           helicase DHX15 (EC 3.6.1.-) (DEAH box protein 15)
           (ATP-dependent RNA helicase #46)
          Length = 795

 Score = 33.9 bits (76), Expect = 0.38
 Identities = 18/41 (43%), Positives = 22/41 (53%)
 Frame = -1

Query: 585 DRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSS 463
           DRD   R  D +RERDR  R R R+K     +KEK    S+
Sbjct: 30  DRDREDRSKDRDRERDRGDREREREK-----EKEKELRAST 65



 Score = 30.8 bits (68), Expect = 3.3
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = -1

Query: 570 GRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRA 451
           G+D D +R+R+   + R R++  G  ++E+ + +    RA
Sbjct: 24  GKDRDRDRDREDRSKDRDRERDRGDREREREKEKEKELRA 63

---

>PPIL4_CRYNE (Q5KNY5) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)|
           (PPIase) (Rotamase)
          Length = 504

 Score = 33.9 bits (76), Expect = 0.38
 Identities = 19/49 (38%), Positives = 27/49 (55%)
 Frame = -1

Query: 600 DQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDR 454
           D +  DRD  GRD +   +R+R  R RSR++     + E+ R R  RDR
Sbjct: 460 DHDRRDRDRNGRDRERNGDRER-YRERSRER-----ENERYRERDDRDR 502



 Score = 32.3 bits (72), Expect = 1.1
 Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
 Frame = -1

Query: 567 RDSDHERERDRAKRH---RSRDKSSGYS-DKEKSRH-RSSRDRAG 448
           R+ D ERERDR+ R    R RD+S     D+E+  H R  RDR G
Sbjct: 426 RERDRERERDRSPRRDRDRERDRSPRRDRDRERDDHDRRDRDRNG 470



 Score = 31.2 bits (69), Expect = 2.5
 Identities = 24/63 (38%), Positives = 37/63 (58%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYYSSG 433
           ++E D+E  +RD R    D +RERDR+ R R RD+     D+ + R R+ RDR     +G
Sbjct: 425 KRERDRER-ERD-RSPRRDRDRERDRSPR-RDRDRERDDHDR-RDRDRNGRDRE---RNG 477

Query: 432 DKD 424
           D++
Sbjct: 478 DRE 480

---

>CCNL1_RAT (Q9R1Q2) Cyclin-L1 (Cyclin-L) (Cyclin Ania-6a)|
          Length = 527

 Score = 33.9 bits (76), Expect = 0.38
 Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRG--RDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYYS 439
           E E  Q+A      G  +DS   R    A R RSR +S   S   +  + + R R+G YS
Sbjct: 365 EPEDRQQASKSPYNGVRKDSKRSRNSRSASRSRSRTRSRSRSHTPRRHYNNRRSRSGTYS 424

Query: 438 SGDKDXXXXXXXXXXXSVL*EHPQREH 358
           S  +                E P+R H
Sbjct: 425 SRSRSRSRSHS---------ESPRRHH 442

---

>CCNL1_HUMAN (Q9UK58) Cyclin-L1 (Cyclin-L)|
          Length = 526

 Score = 33.9 bits (76), Expect = 0.38
 Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRG--RDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYYS 439
           E E  Q+A      G  +DS   R    A R RSR +S   S   +  + + R R+G YS
Sbjct: 364 EPEDRQQASKSPYNGVRKDSKRSRNSRSASRSRSRTRSRSRSHTPRRHYNNRRSRSGTYS 423

Query: 438 SGDKDXXXXXXXXXXXSVL*EHPQREH 358
           S  +                E P+R H
Sbjct: 424 SRSRSRSRSHS---------ESPRRHH 441

---

>TR150_HUMAN (Q9Y2W1) Thyroid hormone receptor-associated protein 3 (Thyroid|
           hormone receptor-associated protein complex 150 kDa
           component) (Trap150)
          Length = 955

 Score = 33.9 bits (76), Expect = 0.38
 Identities = 18/62 (29%), Positives = 31/62 (50%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYYSSG 433
           E+++ +      +  RDS H RER   K  ++   S     K++ +HR +RDR+   SS 
Sbjct: 729 ERDLKRGKSRESVDSRDSSHSRERSAEKTEKTHKGS-----KKQKKHRRARDRSRSSSSS 783

Query: 432 DK 427
            +
Sbjct: 784 SQ 785

---

>DDX3Y_HUMAN (O15523) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box|
           protein 3, Y-chromosomal)
          Length = 660

 Score = 33.5 bits (75), Expect = 0.50
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIR-----GRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAG 448
           + E+DQ+  + D+      G  S   + R      R+R+ S G+ DK+ S    S+D+  
Sbjct: 9   DPELDQQLANLDLNSEKQSGGASTASKGRYIPPHLRNREASKGFHDKDSSGWSCSKDKDA 68

Query: 447 YYSSGDKD 424
           Y S G +D
Sbjct: 69  YSSFGSRD 76

---

>CF151_MOUSE (Q9D361) U11/U12 snRNP 48 kDa protein|
          Length = 337

 Score = 33.5 bits (75), Expect = 0.50
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = -1

Query: 609 KEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYYSSGD 430
           +E+     +   R  D+  + E  R+    SR     Y D E SRHR +R R+ +    +
Sbjct: 250 EELSSHWQEEQGRAGDAAEKNEERRSASVDSRQSGGSYLDVESSRHRRARSRSPHKRKRN 309

Query: 429 KD 424
           KD
Sbjct: 310 KD 311

---

>PRP16_HUMAN (Q92620) Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16|
           (EC 3.6.1.-) (ATP-dependent RNA helicase DHX38) (DEAH
           box protein 38)
          Length = 1227

 Score = 33.5 bits (75), Expect = 0.50
 Identities = 17/38 (44%), Positives = 25/38 (65%)
 Frame = -1

Query: 573 RGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSR 460
           + RD D++R+RDR +R RSR  S   S+++    RSSR
Sbjct: 158 KSRDRDYDRKRDRDERDRSRHSSR--SERDGGSERSSR 193

---

>SFR12_MOUSE (Q8BZX4) Splicing factor, arginine/serine-rich 12|
           (Serine-arginine-rich splicing regulatory protein 86)
           (SRrp86)
          Length = 494

 Score = 33.5 bits (75), Expect = 0.50
 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 10/69 (14%)
 Frame = -1

Query: 612 EKEVDQEAX---DRDIRGRDSDHERERDRAK-------RHRSRDKSSGYSDKEKSRHRSS 463
           ++E D+E     D+D R ++ DHE+ERD+ K       + R +D+S    +K K   +S 
Sbjct: 289 DREKDKERGKNKDKD-REKEKDHEKERDKEKEKEQDKDKEREKDRSKETDEKRKKEKKSR 347

Query: 462 RDRAGYYSS 436
                Y +S
Sbjct: 348 TPPRSYNAS 356



 Score = 33.1 bits (74), Expect = 0.66
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRS 466
           E+E D+E      + +D D E+E+D  K      +     DKE+ + RS
Sbjct: 285 EREKDREKDKERGKNKDKDREKEKDHEKERDKEKEKEQDKDKEREKDRS 333



 Score = 29.6 bits (65), Expect = 7.2
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAK---RHRSRDKSSGYSDKEKSRHRSSR 460
           EK+ ++E      + +D D ERE+DR+K     R ++K S    +  +  R SR
Sbjct: 307 EKDHEKERDKEKEKEQDKDKEREKDRSKETDEKRKKEKKSRTPPRSYNASRRSR 360

---

>DDX3Y_PONPY (Q5RF43) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box|
           protein 3, Y-chromosomal)
          Length = 658

 Score = 33.5 bits (75), Expect = 0.50
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIR-----GRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAG 448
           + E+DQ+  + D+      G  S   + R      R+R+ S G+ DK+ S    S+D+  
Sbjct: 9   DPELDQQLANLDLNSEKQSGGASTASKGRYIPPHLRNREASKGFHDKDSSGWSCSKDKDA 68

Query: 447 YYSSGDKD 424
           Y S G +D
Sbjct: 69  YSSFGSRD 76

---

>CD2L5_HUMAN (Q14004) Cell division cycle 2-like protein kinase 5 (EC 2.7.11.22)|
           (CDC2-related protein kinase 5) (Cholinesterase-related
           cell division controller)
          Length = 1512

 Score = 33.5 bits (75), Expect = 0.50
 Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = -1

Query: 582 RDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHR---SSRDRAGYYSSG 433
           R  R R S   R ++R + HR RD   G S+  KSR R   S  +RA    SG
Sbjct: 197 RPRRDRRSSSGRSKERHREHRRRDGQRGGSEASKSRSRHSHSGEERAEVAKSG 249

---

>DIDO1_MOUSE (Q8C9B9) Death-inducer obliterator 1 (DIO-1) (Death-associated|
            transcription factor 1) (DATF-1) (Fragments)
          Length = 1956

 Score = 33.5 bits (75), Expect = 0.50
 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = -1

Query: 609  KEVDQEAXDRDIRGRDSDHERERDRAK-RHRSRDKSSGYSDKEKSRHRSSRDRA 451
            KE D+       R RD +  R+RDR++ R R RD+     D+++ R R  +DR+
Sbjct: 1879 KEWDRSRERSRNRDRDRERRRDRDRSRSRDRDRDRERA-RDRDRDRGRDRKDRS 1931



 Score = 29.6 bits (65), Expect = 7.2
 Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
 Frame = -1

Query: 573  RGRDSDHERERDRAKR-HRSRDKSSGYS-DKEKSRHRS---SRDR 454
            R  + D ER+ DRAK   RSR++S     D+E+ R R    SRDR
Sbjct: 1865 RSSNRDRERDNDRAKEWDRSRERSRNRDRDRERRRDRDRSRSRDR 1909

---

>SPP2_NEUCR (Q7SBU7) Pre-mRNA-splicing factor spp-2|
          Length = 358

 Score = 33.1 bits (74), Expect = 0.66
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
 Frame = -1

Query: 600 DQEAXDRDIRGRDSDHERERDRAK-----RHRSRDKSSGYSDKEKSRHRSSR 460
           D E  +RD   R  D  R+RDR +     R+R R + +   D+++  +RSSR
Sbjct: 77  DNELENRDRSDRRRDRSRDRDRDRNRDGDRNRDRRRDNRSQDRDRHNNRSSR 128



 Score = 32.7 bits (73), Expect = 0.86
 Identities = 23/54 (42%), Positives = 28/54 (51%), Gaps = 10/54 (18%)
 Frame = -1

Query: 585 DRDIRGRDSDHERERDRAKRHRSRDKSSGYS-------DKEKSRHRS---SRDR 454
           DRD R RD D  R+R R  R + RD+ +  S       D  +SR RS   SRDR
Sbjct: 97  DRD-RNRDGDRNRDRRRDNRSQDRDRHNNRSSRPSRDDDASRSRRRSTSRSRDR 149

---

>CACB2_BOVIN (Q9MZL5) Voltage-dependent L-type calcium channel beta-2 subunit|
           (CAB2) (Calcium channel, voltage-dependent, beta 2
           subunit)
          Length = 603

 Score = 33.1 bits (74), Expect = 0.66
 Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 11/64 (17%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERE-------RDRAKRHRSRD----KSSGYSDKEKSRHRS 466
           ++E   E  D     RD +H  E       R R  RHRSRD    +    S+K++SRH+ 
Sbjct: 514 KEEYSHEHADHYAPHRDHNHREEPHGGGEHRHREPRHRSRDPDREQDHNESNKQRSRHK- 572

Query: 465 SRDR 454
           S+DR
Sbjct: 573 SKDR 576

---

>LUC7L_HUMAN (Q9NQ29) Putative RNA-binding protein Luc7-like 1 (SR+89) (Putative|
           SR protein LUC7B1)
          Length = 371

 Score = 33.1 bits (74), Expect = 0.66
 Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 5/44 (11%)
 Frame = -1

Query: 567 RDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRS-----SRDRA 451
           R     R RDR +RHRSR +S     +  SR RS     SR+RA
Sbjct: 288 RKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRSAKYKFSRERA 331



 Score = 30.4 bits (67), Expect = 4.2
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
 Frame = -1

Query: 573 RGRDSDHERERDRAKRHRSRDKSSGYSDKEKS----RHRSSRDRAGYY 442
           R R     RER +  R RSRD+   +  + +S      R+SRDR+  Y
Sbjct: 277 RRRSRSTSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRSAKY 324

---

>SFR11_HUMAN (Q05519) Splicing factor arginine/serine-rich 11 (Arginine-rich 54|
           kDa nuclear protein) (p54)
          Length = 484

 Score = 33.1 bits (74), Expect = 0.66
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -1

Query: 582 RDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSS 463
           R  + +  D ++ER R +R RS  K     DKEK R R S
Sbjct: 373 RHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKS 412

---

>PPIL4_NEUCR (Q871A4) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)|
           (PPIase) (Rotamase)
          Length = 494

 Score = 33.1 bits (74), Expect = 0.66
 Identities = 20/52 (38%), Positives = 29/52 (55%)
 Frame = -1

Query: 609 KEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDR 454
           ++ D+   DRD+  RD   +R RD   R+R RD    Y+D++   HR  RDR
Sbjct: 442 RDADRRRDDRDLDRRDRRGDRSRD---RYRDRD----YNDRD---HRRGRDR 483

---

>U2AF2_CAEEL (P90978) Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor|
           65 kDa subunit) (U2 snRNP auxiliary factor large
           subunit) (U2AF65)
          Length = 496

 Score = 33.1 bits (74), Expect = 0.66
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
 Frame = -1

Query: 585 DRDIRGRDSDHERERDRAKRHRSRDK-----SSGYSDKEKSRHRSSRDRAG 448
           D D + R     R+RD  +R RSRD+       G  D+++SR R  R   G
Sbjct: 55  DNDRKKRKRSRSRDRDTRRRSRSRDRGERRGGGGGGDRDRSRSRERRRGGG 105

---

>PRP5_ASPFU (Q4WT99) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC|
           3.6.1.-)
          Length = 1211

 Score = 32.7 bits (73), Expect = 0.86
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAK-RHRSRDKSSGYSDKEKSRHRSSRDR 454
           ++ VD+    RD    DS     RDR++ R RSRD+      + KSR R  R R
Sbjct: 63  DRSVDRRDDHRD---EDSYRSSRRDRSRDRRRSRDRGDDRDHRRKSRERDYRSR 113



 Score = 29.3 bits (64), Expect = 9.5
 Identities = 17/53 (32%), Positives = 24/53 (45%)
 Frame = -1

Query: 609 KEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRA 451
           ++ D     R  R RD    R+R   + HR + +   Y    +SR   SRDRA
Sbjct: 73  RDEDSYRSSRRDRSRDRRRSRDRGDDRDHRRKSRERDY----RSRRDDSRDRA 121

---

>LUC7L_MOUSE (Q9CYI4) Putative RNA-binding protein Luc7-like 1|
          Length = 371

 Score = 32.7 bits (73), Expect = 0.86
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -1

Query: 567 RDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSR 460
           R     R RDR +RHRSR +S     +  SR RS++
Sbjct: 288 RKFSRSRSRDRYRRHRSRSRSHSRGHRRASRDRSTK 323

---

>FIP1_MOUSE (Q9D824) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)|
          Length = 581

 Score = 32.7 bits (73), Expect = 0.86
 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 17/70 (24%)
 Frame = -1

Query: 612 EKEVDQEAX-DRDI-RGRDSDHERERDRAKRHRSRDKSSG---------------YSDKE 484
           EK+ D++   DRD  R RD D ERER R +R R RD S                 Y+++ 
Sbjct: 443 EKDRDRDRERDRDRERERDRDRERERTR-ERERERDHSPTPSVFNSDEERYRYREYAERG 501

Query: 483 KSRHRSSRDR 454
             RHR+SR++
Sbjct: 502 YERHRASREK 511



 Score = 30.0 bits (66), Expect = 5.6
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -1

Query: 555 HERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRA 451
           H   R++ +RHR R     + +KE++RH+SSR  +
Sbjct: 505 HRASREKEERHRERR----HREKEETRHKSSRSNS 535

---

>LC7L2_HUMAN (Q9Y383) Putative RNA-binding protein Luc7-like 2|
          Length = 392

 Score = 32.7 bits (73), Expect = 0.86
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = -1

Query: 573 RGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRA 451
           R R S  +R R+R+KR  S+++          R RSSRDR+
Sbjct: 318 RSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDRS 358



 Score = 32.0 bits (71), Expect = 1.5
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = -1

Query: 573 RGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYYSSGDK 427
           R R     RER R  R +SR+K   +  +  SR RS   +   +SS D+
Sbjct: 278 RHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDR 326



 Score = 30.4 bits (67), Expect = 4.2
 Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 18/59 (30%)
 Frame = -1

Query: 573 RGRDSDHERERDRA---------------KRHRSRDKSSGYS---DKEKSRHRSSRDRA 451
           R R  +H R R R+               KRHR R +SS  S     ++SRH SSRDR+
Sbjct: 270 RSRSREHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRH-SSRDRS 327

---

>FIP1_RAT (Q5U317) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)|
          Length = 536

 Score = 32.7 bits (73), Expect = 0.86
 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 17/70 (24%)
 Frame = -1

Query: 612 EKEVDQEAX-DRDI-RGRDSDHERERDRAKRHRSRDKSSG---------------YSDKE 484
           EK+ D++   DRD  R RD D ERER R +R R RD S                 Y+++ 
Sbjct: 398 EKDRDRDRERDRDRERERDRDRERERTR-ERERERDHSPTPSVFNSDEERYRYREYAERG 456

Query: 483 KSRHRSSRDR 454
             RHR+SR++
Sbjct: 457 YERHRASREK 466



 Score = 30.0 bits (66), Expect = 5.6
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -1

Query: 555 HERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRA 451
           H   R++ +RHR R     + +KE++RH+SSR  +
Sbjct: 460 HRASREKEERHRERR----HREKEETRHKSSRSNS 490

---

>CS029_MOUSE (Q9CS00) Protein C19orf29 homolog|
          Length = 772

 Score = 32.7 bits (73), Expect = 0.86
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = -1

Query: 567 RDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRS 466
           R  +HER R+R +R R R   S    ++KSR RS
Sbjct: 61  RRREHERRRERKRRSRGRRSDSEGEQRQKSRRRS 94



 Score = 32.7 bits (73), Expect = 0.86
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -1

Query: 573 RGRDSDHERERDRAK-RHRSRDKSSGYSDKEKSRHRSSRDR 454
           RGR     R R R++ R RSR +S G S + +  H   R+R
Sbjct: 31  RGRSRSRSRSRSRSRSRSRSRSRSHGRSSRRRREHERRRER 71

---

>RED_MOUSE (Q9Z1M8) Protein Red (Protein RER) (IK factor) (Cytokine IK)|
          Length = 557

 Score = 32.7 bits (73), Expect = 0.86
 Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
 Frame = -1

Query: 612 EKEVDQEAXDRDI---RGRDSDHERERDRAKRHRSRDKSSGYSDKEK 481
           E+E D+E  DRD    R RD + ERERDR +      K   Y +K K
Sbjct: 343 ERERDRER-DRDRERDRERDRERERERDREREREEEKKRHSYFEKPK 388



 Score = 29.6 bits (65), Expect = 7.2
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
 Frame = -1

Query: 609 KEVDQEAXDRDIRGRDSDHERERDRAK---RHRSRDKSSGYSDKEKSRH 472
           ++ ++E      R R+ D +RERDR +   R R RD+     ++EK RH
Sbjct: 334 RDKERERYRERERDRERDRDRERDRERDRERERERDRER-EREEEKKRH 381



 Score = 29.3 bits (64), Expect = 9.5
 Identities = 17/49 (34%), Positives = 27/49 (55%)
 Frame = -1

Query: 573 RGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYYSSGDK 427
           R R+ D ER+RDR +R R RD+     ++E+ R R   +    +S  +K
Sbjct: 342 RERERDRERDRDR-ERDRERDRE---RERERDREREREEEKKRHSYFEK 386

---

>ARS2_HUMAN (Q9BXP5) Arsenite-resistance protein 2|
          Length = 876

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 20/56 (35%), Positives = 30/56 (53%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGY 445
           + E D+   D+  R R SD++R R+R +R R  D    ++D+E  R R  R R  Y
Sbjct: 5   DDEYDRRRRDKFRRER-SDYDRSRERDERRRGDD----WNDREWDRGRERRSRGEY 55

---

>SFR12_RAT (Q9JKL7) Splicing factor, arginine/serine-rich 12|
           (Serine-arginine-rich splicing regulatory protein 86)
           (SRrp86) (SR-related protein of 86 kDa)
          Length = 494

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 15/74 (20%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSD--------HERERDRAK-------RHRSRDKSSGYSDKEKS 478
           EKE ++E      RG++ D        HE+ERD+ K       + R +D+S    +K K 
Sbjct: 283 EKEREKEREKDKERGKNKDKDREKEKDHEKERDKEKEKEQDKDKEREKDRSKEADEKRKK 342

Query: 477 RHRSSRDRAGYYSS 436
             +S      Y SS
Sbjct: 343 EKKSRTPPRSYNSS 356



 Score = 30.0 bits (66), Expect = 5.6
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 8/61 (13%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRA--------KRHRSRDKSSGYSDKEKSRHRSSRD 457
           EK+ ++E      + +D D ERE+DR+        K  +SR     Y+   +SR  +SR+
Sbjct: 307 EKDHEKERDKEKEKEQDKDKEREKDRSKEADEKRKKEKKSRTPPRSYNSSRRSR-SASRE 365

Query: 456 R 454
           R
Sbjct: 366 R 366

---

>PRP5_NEUCR (Q7SH33) Pre-mRNA-processing ATP-dependent RNA helicase prp-5 (EC|
           3.6.1.-)
          Length = 1194

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
 Frame = -1

Query: 609 KEVDQEAXDRDIRGRDSDHERERDRA---KRHRSRDKSSGYSDKEKSRHRSSRDRA---- 451
           K  D +  DRD R    DH R R R+   +R+R RD+  G   +++  +R  RDR+    
Sbjct: 20  KRKDDDRRDRDRRDGPVDH-RRRSRSPIDRRYRDRDRDRGRDGRDRDSYR-RRDRSIDRR 77

Query: 450 --GYYSSGDKD 424
              YY    +D
Sbjct: 78  DDDYYRGSRRD 88



 Score = 31.6 bits (70), Expect = 1.9
 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
 Frame = -1

Query: 573 RGRDSDHERERDRAKR---HRSRDKSS---GYSDKEKSRHRSSRDRAGY 445
           R R  D  R+RDR      HR R +S     Y D+++ R R  RDR  Y
Sbjct: 19  RKRKDDDRRDRDRRDGPVDHRRRSRSPIDRRYRDRDRDRGRDGRDRDSY 67

---

>ARS2_MOUSE (Q99MR6) Arsenite-resistance protein 2|
          Length = 875

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 20/56 (35%), Positives = 30/56 (53%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGY 445
           + E D+   D+  R R SD++R R+R +R R  D    ++D+E  R R  R R  Y
Sbjct: 5   DDEYDRRRRDKFRRER-SDYDRSRERDERRRGDD----WNDREWDRGRERRSRGEY 55

---

>TOP1_DROME (P30189) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
          Length = 972

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERE---RDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYY 442
           +K  D+E   +      S  E +   RD+  RH+S   SS + DK+K R  SS       
Sbjct: 54  DKHRDREREHKSSNSSSSSKEHKSSSRDK-DRHKSSSSSSKHRDKDKERDGSSNSHRSGS 112

Query: 441 SSGDKD 424
           SS  KD
Sbjct: 113 SSSHKD 118



 Score = 31.2 bits (69), Expect = 2.5
 Identities = 24/65 (36%), Positives = 30/65 (46%), Gaps = 12/65 (18%)
 Frame = -1

Query: 582 RDIRGRDSDHERERDRAKRHRS----RDK--------SSGYSDKEKSRHRSSRDRAGYYS 439
           +D   RD D +R    + RH+S    RDK        SS  S   KS+H SSR  +   S
Sbjct: 139 KDKERRDKDKDRGSSSSSRHKSSSSSRDKERSSSSHKSSSSSSSSKSKHSSSRHSS---S 195

Query: 438 SGDKD 424
           S  KD
Sbjct: 196 SSSKD 200



 Score = 30.0 bits (66), Expect = 5.6
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
 Frame = -1

Query: 567 RDSDHERERDRAKRHRSRDKSSG-----YSDKEKSRHRSS 463
           + S  ++ RDR + H+S + SS       S ++K RH+SS
Sbjct: 49  KSSSKDKHRDREREHKSSNSSSSSKEHKSSSRDKDRHKSS 88



 Score = 29.6 bits (65), Expect = 7.2
 Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 13/61 (21%)
 Frame = -1

Query: 567 RDSDHERERDRAKRHRSRDK-------------SSGYSDKEKSRHRSSRDRAGYYSSGDK 427
           RD D  +    + +HR +DK             SS + DK+ S     +  +G++    K
Sbjct: 80  RDKDRHKSSSSSSKHRDKDKERDGSSNSHRSGSSSSHKDKDGSSSSKHKSSSGHHKRSSK 139

Query: 426 D 424
           D
Sbjct: 140 D 140

---

>PRP5_EMENI (Q5BDW4) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC|
           3.6.1.-)
          Length = 1173

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 21/55 (38%), Positives = 23/55 (41%), Gaps = 15/55 (27%)
 Frame = -1

Query: 573 RGRDSDHERERDRAKRHRSRDKSSGYSD---------------KEKSRHRSSRDR 454
           R RD DH+R+  R  R R RD  S   D               K KSR   SRDR
Sbjct: 90  RSRDRDHDRDYRRRSRSRDRDYRSRRDDSRDRVRRRTDDSADLKRKSRRDDSRDR 144

---

>PQBP1_HUMAN (O60828) Polyglutamine-binding protein 1 (Polyglutamine|
           tract-binding protein 1) (PQBP-1) (38 kDa nuclear
           protein containing a WW domain) (Npw38)
          Length = 265

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = -1

Query: 600 DQEAXDRDIRGRDS-DHERERDRAK-RHRSRDKSSGYSDKEKSRHR 469
           D+   DR+ RG D  D ERERDR + R R  DK+     KE+  HR
Sbjct: 136 DKSDRDRE-RGYDKVDRERERDRERDRDRGYDKADREEGKERRHHR 180



 Score = 30.4 bits (67), Expect = 4.2
 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 11/74 (14%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRD-SDHERER--------DRAKRHRSRDKSSGYS--DKEKSRHRS 466
           E+++D+ + D+  RG D SD   E+        DR      RD+  GY   D+E+ R R 
Sbjct: 100 EEKLDR-SHDKSDRGHDKSDRSHEKLDRGHDKSDRGHDKSDRDRERGYDKVDRERERDR- 157

Query: 465 SRDRAGYYSSGDKD 424
            RDR   Y   D++
Sbjct: 158 ERDRDRGYDKADRE 171



 Score = 29.6 bits (65), Expect = 7.2
 Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 9/53 (16%)
 Frame = -1

Query: 585 DRDIRGRD-SDHERER-----DRAK-RHRSRDKSSGY--SDKEKSRHRSSRDR 454
           D+  RG D SD +RER     DR + R R RD+  GY  +D+E+ + R    R
Sbjct: 129 DKSDRGHDKSDRDRERGYDKVDRERERDRERDRDRGYDKADREEGKERRHHRR 181

---

>BRE1A_CHICK (Q5ZLS3) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING|
           finger protein 20)
          Length = 984

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = -1

Query: 579 DIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHR 469
           +++ R  + ERER+R +R R R+K     +KEK R R
Sbjct: 559 EVKARRDEEERERERREREREREK-----EKEKERER 590



 Score = 32.0 bits (71), Expect = 1.5
 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAK-RHRSRDKSSGYSDKEKSRHRSSRDR 454
           E+E ++E      R ++ + E+ER+R K + +  +K     +KEK +H   R +
Sbjct: 577 EREREKEKEKEREREKEKEKEKEREREKQKQKESEKERESKEKEKGKHEDGRKK 630



 Score = 30.0 bits (66), Expect = 5.6
 Identities = 15/47 (31%), Positives = 29/47 (61%)
 Frame = -1

Query: 600 DQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSR 460
           D+E  +R+ R R+ + E+E+++ +R R ++K     +KEK R R  +
Sbjct: 565 DEEERERERREREREREKEKEK-EREREKEK-----EKEKEREREKQ 605

---

>YOW5_CAEEL (P30651) Hypothetical protein ZK643.5|
          Length = 487

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
 Frame = -1

Query: 582 RDIRGRDSDHERERDRAKRHRSRDKSSGYSDK----EKSRHRSSRDRAGYYSSGDKD 424
           RD R R S        +   RSR +SS  SD+    ++ R R  RDR  Y   G +D
Sbjct: 246 RDTRKRRSSSYSSTSSSSDGRSRSRSSSRSDRRRRDDRKRPREDRDRKDYRRDGRRD 302

---

>PRP5_GIBZE (Q4IP34) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC|
           3.6.1.-)
          Length = 1227

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 13/53 (24%)
 Frame = -1

Query: 573 RGRDSDHERERDRAK---RHRSRDKS----------SGYSDKEKSRHRSSRDR 454
           R RD D +R+RDRA+    +R RD+S           G  D  +   R SRDR
Sbjct: 71  RNRDRDRDRDRDRARDRDNYRRRDRSLDRRDDNHYRGGRRDNRERDRRRSRDR 123

---

>CYP1_BRUMA (Q27450) Peptidyl-prolyl cis-trans isomerase 1 (EC 5.2.1.8) (PPIase|
           1) (Cyclophilin) (BmCYP-1)
          Length = 843

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -1

Query: 573 RGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSR 460
           R R S   R R R +RH+SR +S GY  + +   RS R
Sbjct: 713 RRRRSSSRRSRSRDRRHKSRSRSRGYVRRFEGWSRSRR 750

---

>CF151_HUMAN (Q6IEG0) U11/U12 snRNP 48 kDa protein|
          Length = 339

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 17/62 (27%), Positives = 26/62 (41%)
 Frame = -1

Query: 609 KEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYYSSGD 430
           +E+     +   +  D   + E  R+    SR     Y D E SRHR  R R+ +    +
Sbjct: 250 EELSNHWQEEQEKAEDDAEKNEERRSASVDSRQSGGSYLDAECSRHRRDRSRSPHKRKRN 309

Query: 429 KD 424
           KD
Sbjct: 310 KD 311

---

>RSRC1_RAT (Q5PPJ2) Arginine/serine-rich coiled coil protein 1|
          Length = 334

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = -1

Query: 573 RGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYYSSG 433
           R RD D  + RD+ KR + +DK      K+K  H   R   G   +G
Sbjct: 132 RSRDRDRRKVRDKEKREKEKDKG-----KDKEAHTIKRGDCGNIKAG 173

---

>DDX46_BRARE (Q4TVV3) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)|
           (DEAD box protein 46)
          Length = 1018

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = -1

Query: 573 RGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDR 454
           R +  D    R  ++R RSR +    S + K + RSSRDR
Sbjct: 31  RSKKDDRTASRTHSRRERSRSRERRRSRERKRQRRSSRDR 70

---

>VE2_HPV20 (P50766) Regulatory protein E2|
          Length = 497

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -1

Query: 573 RGRDSDHERERDRAK-RHRSRDKSSGYSDKEKSRHRSSRDRAG 448
           R R     + R R++ RHRSR +S   S + +SR+RS     G
Sbjct: 265 RSRSKSKSKSRSRSRSRHRSRSRSRSESPRRRSRYRSRSGSRG 307

---

>SFR12_HUMAN (Q8WXA9) Splicing factor, arginine/serine-rich 12|
           (Serine-arginine-rich splicing regulatory protein 86)
           (SRrp86) (Splicing regulatory protein 508) (SRrp508)
          Length = 508

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = -1

Query: 609 KEVDQEAXDRDIRGRDSDHERERDRAKRH-RSRDK-SSGYSDKEKSRHR 469
           K  D++      R +D + +RER+R K H + RDK      DKEK R +
Sbjct: 297 KNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREK 345



 Score = 31.2 bits (69), Expect = 2.5
 Identities = 14/53 (26%), Positives = 27/53 (50%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDR 454
           E+E ++E      RG++ D ++ER+   + R +DK      + +  H   RD+
Sbjct: 282 EREREKEREKEKERGKNKDRDKERE---KDREKDKEKDREREREKEHEKDRDK 331



 Score = 30.8 bits (68), Expect = 3.3
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 9/68 (13%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAK---------RHRSRDKSSGYSDKEKSRHRSSR 460
           E+E D+E      R R+ + E E+DR K         + R +D+S    +K K   +S  
Sbjct: 304 EREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRT 363

Query: 459 DRAGYYSS 436
               Y +S
Sbjct: 364 PPRSYNAS 371



 Score = 30.8 bits (68), Expect = 3.3
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAK-----RHRSRDKSSGYS-DKEKSRHR 469
           E+E ++E      + +D D ERE+DR K     R R R+K      DKEK + +
Sbjct: 284 EREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQ 337



 Score = 30.4 bits (67), Expect = 4.2
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSR 460
           EKE D+E      R ++ D +R++D+  R   R  ++    +  SR R  R
Sbjct: 334 EKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRR 384



 Score = 30.4 bits (67), Expect = 4.2
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 8/61 (13%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAK---RHRSRDKSS-----GYSDKEKSRHRSSRD 457
           EKE +++      + +D + ERE+DR+K     R +DK S      Y+   +SR  SSR+
Sbjct: 322 EKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSR-SSSRE 380

Query: 456 R 454
           R
Sbjct: 381 R 381



 Score = 29.6 bits (65), Expect = 7.2
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDK---SSGYSDKEKSRHR 469
           EKE  +E      R R+ + E+E++R K ++ RDK        DKEK R R
Sbjct: 270 EKERVKEKDREKEREREKEREKEKERGK-NKDRDKEREKDREKDKEKDRER 319

---

>YLPM1_MOUSE (Q9R0I7) YLP motif-containing protein 1 (Nuclear protein ZAP3)|
          Length = 1386

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
 Frame = -1

Query: 585  DRDIRGRDSDHERER-DRAKRHRSRDKSSGYSDKE--KSRHRSSRDRAGYYSSGDK 427
            DRD R R  D+ER+R DR +R R  D++  Y DK+   S  R   DR  Y    D+
Sbjct: 959  DRD-RDRVLDYERDRFDRERRPRD-DRNQSYRDKKDHSSSRRGGFDRPSYDRKSDR 1012

---

>YTDC1_HUMAN (Q96MU7) YTH domain-containing protein 1 (Putative splicing factor|
           YT521)
          Length = 727

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = -1

Query: 582 RDIRGRDSDHERERDRAK-RHRSRDKSSGYSDKEKSRHR-SSRDR 454
           R  R R+ D ERERDR +   R R++  G  D+E+ R R   RDR
Sbjct: 674 RRSRPRERDRERERDRPRDNRRDRERDRG-RDRERERERLCDRDR 717

---

>YTDC1_RAT (Q9QY02) YTH domain-containing protein 1 (Putative splicing factor|
           YT521) (RA301-binding protein)
          Length = 738

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = -1

Query: 582 RDIRGRDSDHERERDRAK-RHRSRDKSSGYSDKEKSRHR-SSRDR 454
           R  R R+ D ERERDR +   R R++  G  D+E+ R R   RDR
Sbjct: 685 RRSRPRERDRERERDRPRDNRRDRERDRG-RDRERERERICDRDR 728

---

>TOP1_MOUSE (Q04750) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
          Length = 767

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHR--SSRDRAGYYS 439
           +K  D+E   ++ + +D D +RE+ +      +D    + +KEK++H+  SS      + 
Sbjct: 26  DKHKDREHRHKEHK-KDKDKDREKSKHSNSEHKDSEKKHKEKEKTKHKDGSSEKHKDKHK 84

Query: 438 SGDKD 424
             DK+
Sbjct: 85  DRDKE 89

---

>NCOR1_XENTR (Q4KKX4) Nuclear receptor corepressor 1 (N-CoR1) (N-CoR) (xN-CoR)|
          Length = 2494

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = -1

Query: 573  RGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYY 442
            R R+ D ER+R+R K  R R++     D+E+ R R +   + +Y
Sbjct: 1777 RERERDRERDREREKEQRERER-----DRERERERLAAAPSDHY 1815

---

>U2AF2_DROME (Q24562) Splicing factor U2AF 50 kDa subunit (U2 auxiliary factor|
           50 kDa subunit) (U2 snRNP auxiliary factor large
           subunit)
          Length = 416

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 17/41 (41%), Positives = 20/41 (48%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSD 490
           ++E D+E      R RD   ER RDR     SR K S Y D
Sbjct: 5   DRERDRERRRHRSRSRDRHRERSRDRRHHRNSRRKPSLYWD 45



 Score = 29.6 bits (65), Expect = 7.2
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -1

Query: 558 DHERERDRAKRHRSRDKSSGYS-DKEKSRHRSSRDRAGYY 442
           D ER+R+R +RHRSR +       +++  HR+SR +   Y
Sbjct: 5   DRERDRER-RRHRSRSRDRHRERSRDRRHHRNSRRKPSLY 43

---

>RSRC1_MOUSE (Q9DBU6) Arginine/serine-rich coiled coil protein 1|
          Length = 334

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = -1

Query: 573 RGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYYSSG 433
           R RD D  + RD+ KR + +DK      K+K  H   R  +G   +G
Sbjct: 132 RSRDRDRRKVRDKEKREKEKDKG-----KDKEVHSIKRGDSGNIKAG 173

---

>RSRC1_HUMAN (Q96IZ7) Arginine/serine-rich coiled coil protein 1|
          Length = 334

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = -1

Query: 573 RGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYYSSG 433
           R RD +  + RD+ KR + +DK      K+K  H   R  +G   +G
Sbjct: 132 RSRDRERRKGRDKEKREKEKDKG-----KDKELHNIKRGESGNIKAG 173

---

>SNUT3_HUMAN (Q8WVK2) U4/U6.U5 tri-snRNP-associated protein 3 (U4/U6.U5|
           tri-snRNP-associated 27 kDa protein) (27K) (Nucleic
           acid-binding protein RY-1)
          Length = 155

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = -1

Query: 573 RGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDR 454
           R R +  ERER R +R RSR++     D+ +SR RS   R
Sbjct: 15  RSRSTSRERERRRRERSRSRER-----DRRRSRSRSPHRR 49

---

>SFR17_HUMAN (Q8TF01) Splicing factor, arginine/serine-rich 130|
           (Serine-arginine-rich splicing regulatory protein 130)
           (SRrp130) (SR-rich protein) (SR-related protein)
          Length = 805

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
 Frame = -1

Query: 609 KEVDQEAXDRDIRGRDSDHERERDRAKRHRSRD----KSSGYSDKEKSRHRSSR 460
           K+    + D+D + +D + ERE+D+ K  + R+    K S   D+ K +  S R
Sbjct: 666 KKERSRSIDKDRKKKDKEREREQDKRKEKQKREEKDFKFSSQDDRLKRKRESER 719

---

>YP62_CAEEL (Q09437) Putative serine/threonine-protein kinase B0495.2 (EC|
           2.7.11.1)
          Length = 719

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = -1

Query: 606 EVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYS--DKEKSRHRSSR 460
           E D    +R  R R S  ER+ ++ KRH  R K S  +  D +KS H+ S+
Sbjct: 142 ETDGHRTNRSNRDRSS--ERDSEKHKRHIDRHKKSSTTSPDNDKSPHKKSK 190

---

>CD2L7_CAEEL (P46551) Putative cell division cycle 2-related protein kinase 7|
           (EC 2.7.11.22)
          Length = 730

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = -1

Query: 600 DQEAXDRDIRGRDSDHERERDRAKRHRSRDKS---SGYSDKEKSRHRS 466
           D+   D   R +  D+ + RD+  R RSR +S   SG S K K R+ S
Sbjct: 77  DRGRNDFSYRKKGKDYNKRRDKRSRSRSRHRSPKRSGSSKKSKRRNSS 124

---

>SNUT3_BRARE (Q6DH74) U4/U6.U5 tri-snRNP-associated protein 3|
          Length = 158

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = -1

Query: 573 RGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDR 454
           R R S  +RER R +R RSR +     D+ +SR RS   R
Sbjct: 16  RSRSSSRDRERRRRERERSRSRD---RDRRRSRSRSPHRR 52

---

>DDX3Y_MOUSE (Q62095) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box|
           protein 3, Y-chromosomal) (DEAD-box RNA helicase DEAD2)
           (mDEAD2) (D1Pas1-related sequence 1)
          Length = 658

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
 Frame = -1

Query: 603 VDQEAXDRDIRGRDSDHERERDRAKRH------RSRDKSSGYSDKEKSRHRSSRDRAGYY 442
           +DQ+    D++  D+ +      +K        R+R+ S G  DK+ S    S+D+  Y 
Sbjct: 12  LDQQFVGLDLKSSDNQNGGGNTESKGRYIPPHLRNRETSKGVCDKDSSGWSCSKDKDAYS 71

Query: 441 SSGDKD 424
           S G +D
Sbjct: 72  SFGSRD 77

---

>TOP1_HUMAN (P11387) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
          Length = 765

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
 Frame = -1

Query: 585 DRDIRGRDSDHERERDRAKRHRS--RDKSSGYSDKEKSRHR--SSRDRAGYYSSGDKD 424
           DR+ R ++   E++R+++K   S  +D    + +KEK++H+  SS      +   DK+
Sbjct: 30  DREHRHKEHKKEKDREKSKHSNSEHKDSEKKHKEKEKTKHKDGSSEKHKDKHKDRDKE 87

---

>MOG1_CAEEL (P34498) Probable pre-mRNA-splicing factor ATP-dependent RNA|
           helicase mog-1 (EC 3.6.1.-) (Sex determination protein
           mog-1) (Masculinization of germ line protein 1)
          Length = 1131

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
 Frame = -1

Query: 609 KEVDQEAXDRDIRG-----RDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSR 460
           ++V ++  DRD RG     RD D  R+RDR++R   R+ SS    K++S  ++ R
Sbjct: 76  EKVHEKHRDRDDRGMKYKSRDDDRRRDRDRSER---REPSSRRGWKDRSGDQTPR 127

---

>CNG3_CHICK (Q90980) Cyclic nucleotide-gated channel, rod photoreceptor,|
           subunit alpha (CNG channel 3) (CNG-3) (CNG3)
          Length = 645

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 15/60 (25%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAG--YYS 439
           EK+  +E   +    +D + ++ +++ ++H+++DK  G  ++EK +     D AG  YY+
Sbjct: 61  EKKKKKEKKSKSENKKDGERQKNKEKKEKHKNKDKKKG-KEEEKKKDIFIIDPAGNMYYN 119

---

>CACB2_RAT (Q8VGC3) Voltage-dependent L-type calcium channel beta-2 subunit|
           (CAB2) (Calcium channel, voltage-dependent, beta 2
           subunit)
          Length = 655

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -1

Query: 570 GRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYYS 439
           GRD DH     +  RH+S+D+   Y DKE       R  AG ++
Sbjct: 608 GRDQDHNECSKQRSRHKSKDR---YCDKEGEVISKRRSEAGEWN 648



 Score = 30.0 bits (66), Expect = 5.6
 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 11/64 (17%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERE-------RDRAKRHRS----RDKSSGYSDKEKSRHRS 466
           +++   E  DR +  R+ +H  E       R R  RHR+    RD+      K++SRH+ 
Sbjct: 566 KEDYSHEHVDRYVPHREHNHREESHSSNGHRHREPRHRTRDMGRDQDHNECSKQRSRHK- 624

Query: 465 SRDR 454
           S+DR
Sbjct: 625 SKDR 628

---

>CACB2_MOUSE (Q8CC27) Voltage-dependent L-type calcium channel beta-2 subunit|
           (CAB2) (Calcium channel, voltage-dependent, beta 2
           subunit)
          Length = 655

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 11/64 (17%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERE-------RDRAKRHRSRDKSSGYSD----KEKSRHRS 466
           +++   E  DR +  R+ +H  E       R R  RHRSRD           K++SRH+ 
Sbjct: 566 KEDYSHEHVDRYVPHREHNHREETHSSNGHRHRESRHRSRDMGRDQDHNECIKQRSRHK- 624

Query: 465 SRDR 454
           S+DR
Sbjct: 625 SKDR 628



 Score = 30.4 bits (67), Expect = 4.2
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -1

Query: 570 GRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYYS 439
           GRD DH     +  RH+S+D+   Y DKE       R+ AG ++
Sbjct: 608 GRDQDHNECIKQRSRHKSKDR---YCDKEGEVISKRRNEAGEWN 648

---

>SFR15_RAT (Q63627) Splicing factor, arginine/serine-rich 15 (CTD-binding|
           SR-like protein RA4) (Fragment)
          Length = 1048

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
 Frame = -1

Query: 573 RGRDSDHERERDRAK---RHRSRDKSSGYSDKEKSRHRSSR 460
           R R S H R R R++   RH  R +S    D+EK R R  +
Sbjct: 367 RSRRSRHRRSRSRSRDRRRHSPRSRSQERRDREKERERRQK 407

---

>DDX46_RAT (Q62780) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)|
           (DEAD box protein 46) (Helicase of 117.4 kDa)
          Length = 1032

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = -1

Query: 600 DQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRS-SRDR 454
           D++      R RD    R RDR +  RSR +     D+ + R RS SRDR
Sbjct: 44  DRDRRRERSRSRDKRRSRSRDRKRLRRSRSRE---RDRSRERRRSRSRDR 90



 Score = 29.6 bits (65), Expect = 7.2
 Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 21/74 (28%)
 Frame = -1

Query: 585 DRDIRGRDSDHERERDRA--------------KRHRSRDKS-------SGYSDKEKSRHR 469
           DR  R RD D  RER R+              +R RSR++        S   D+ +SR R
Sbjct: 37  DRRSRSRDRDRRRERSRSRDKRRSRSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSR 96

Query: 468 SSRDRAGYYSSGDK 427
           S   R+   S G K
Sbjct: 97  SRGRRSRSSSPGSK 110

---

>DDX46_PONPY (Q5R6D8) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)|
           (DEAD box protein 46)
          Length = 1032

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = -1

Query: 600 DQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRS-SRDR 454
           D++      R RD    R RDR +  RSR +     D+ + R RS SRDR
Sbjct: 44  DRDRRRERSRSRDKRRSRSRDRKRLRRSRSRE---RDRSRERRRSRSRDR 90



 Score = 30.0 bits (66), Expect = 5.6
 Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 21/74 (28%)
 Frame = -1

Query: 585 DRDIRGRDSDHERERDRA--------------KRHRSRDKS-------SGYSDKEKSRHR 469
           DR  R RD D  RER R+              +R RSR++        S   D+ +SR R
Sbjct: 37  DRRSRSRDRDRRRERSRSRDKRRSRSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSR 96

Query: 468 SSRDRAGYYSSGDK 427
           S   R+   S G+K
Sbjct: 97  SRGRRSRSSSPGNK 110

---

>DDX46_MOUSE (Q569Z5) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)|
           (DEAD box protein 46)
          Length = 1032

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = -1

Query: 600 DQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRS-SRDR 454
           D++      R RD    R RDR +  RSR +     D+ + R RS SRDR
Sbjct: 44  DRDRRRERSRSRDKRRSRSRDRKRLRRSRSRE---RDRSRERRRSRSRDR 90



 Score = 29.6 bits (65), Expect = 7.2
 Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 21/74 (28%)
 Frame = -1

Query: 585 DRDIRGRDSDHERERDRA--------------KRHRSRDKS-------SGYSDKEKSRHR 469
           DR  R RD D  RER R+              +R RSR++        S   D+ +SR R
Sbjct: 37  DRRSRSRDRDRRRERSRSRDKRRSRSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSR 96

Query: 468 SSRDRAGYYSSGDK 427
           S   R+   S G K
Sbjct: 97  SRGRRSRSSSPGSK 110

---

>DDX46_HUMAN (Q7L014) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)|
           (DEAD box protein 46) (PRP5 homolog)
          Length = 1032

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = -1

Query: 600 DQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRS-SRDR 454
           D++      R RD    R RDR +  RSR +     D+ + R RS SRDR
Sbjct: 44  DRDRRRERSRSRDKRRSRSRDRKRLRRSRSRE---RDRSRERRRSRSRDR 90



 Score = 30.0 bits (66), Expect = 5.6
 Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 21/74 (28%)
 Frame = -1

Query: 585 DRDIRGRDSDHERERDRA--------------KRHRSRDKS-------SGYSDKEKSRHR 469
           DR  R RD D  RER R+              +R RSR++        S   D+ +SR R
Sbjct: 37  DRRSRSRDRDRRRERSRSRDKRRSRSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSR 96

Query: 468 SSRDRAGYYSSGDK 427
           S   R+   S G+K
Sbjct: 97  SRGRRSRSSSPGNK 110

---

>PRP5_ASPOR (Q2U2J6) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC|
           3.6.1.-)
          Length = 1186

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = -1

Query: 585 DRDIRGRDSDHE-RERDRAKRHRSRDKSSGYSD-KEKSRHRSSRDRA 451
           DRD R R  D + R R    R R+R ++   +D K KSR   SR+RA
Sbjct: 100 DRDYRRRSRDRDFRSRRDDSRDRARRRTDDSADLKHKSRRDDSRERA 146

---

>FIP1_BRARE (Q5XJD3) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)|
          Length = 570

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -1

Query: 564 DSDHERERDRAKRHRS-RDKSSGYSDKEKSRHRSSR 460
           D  +ER R+RA R +  R     + +KE+ RH+SSR
Sbjct: 488 DRGYERHRERASREKEERHGGRRHREKEEGRHKSSR 523

---

>CD2L5_MOUSE (Q69ZA1) Cell division cycle 2-like protein kinase 5 (EC 2.7.11.22)|
           (CDC2-related protein kinase 5)
          Length = 1511

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -1

Query: 582 RDIRGRDSDHERERDRAKRHRSRD--KSSGYSDKEKSRH-RSSRDRAGYYSSG 433
           R  R R S   R ++R + HR RD  +S   + K +SRH  S  +RA    SG
Sbjct: 197 RPRRDRRSSSGRSKERHREHRRRDGTRSGSEASKARSRHGHSGEERAEAAKSG 249

---

>U2AF2_MOUSE (P26369) Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor|
           65 kDa subunit) (U2 snRNP auxiliary factor large
           subunit)
          Length = 475

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = -1

Query: 600 DQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYYSSGDKD 424
           +++  D++ R R   H R R R ++ RSR +     D ++S  R  R R+   + G K+
Sbjct: 14  NKQERDKENRHRKRSHSRSRSRDRKRRSRSRDRRNRD-QRSASRDRRRRSKPLTRGAKE 71



 Score = 30.8 bits (68), Expect = 3.3
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = -1

Query: 561 SDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDR 454
           +++++ERD+  RHR R  S   S   K R R SRDR
Sbjct: 12  NENKQERDKENRHRKRSHSRSRSRDRKRRSR-SRDR 46

---

>U2AF2_HUMAN (P26368) Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor|
           65 kDa subunit) (U2 snRNP auxiliary factor large
           subunit) (hU2AF(65))
          Length = 475

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = -1

Query: 600 DQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYYSSGDKD 424
           +++  D++ R R   H R R R ++ RSR +     D ++S  R  R R+   + G K+
Sbjct: 14  NKQERDKENRHRKRSHSRSRSRDRKRRSRSRDRRNRD-QRSASRDRRRRSKPLTRGAKE 71



 Score = 30.8 bits (68), Expect = 3.3
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = -1

Query: 561 SDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDR 454
           +++++ERD+  RHR R  S   S   K R R SRDR
Sbjct: 12  NENKQERDKENRHRKRSHSRSRSRDRKRRSR-SRDR 46

---

>ZO2_HUMAN (Q9UDY2) Tight junction protein ZO-2 (Zonula occludens 2 protein)|
           (Zona occludens 2 protein) (Tight junction protein 2)
          Length = 1190

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 18/54 (33%)
 Frame = -1

Query: 573 RGRDSDHERERDRAK---------------RHRSRDKSSGYS---DKEKSRHRS 466
           RG D DH R RDR++               R R RD+S G S   D E++ HR+
Sbjct: 203 RGLDQDHARTRDRSRGRSLERGLDHDFGPSRDRDRDRSRGRSIDQDYERAYHRA 256

---

>TOP1_RAT (Q9WUL0) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
          Length = 767

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHR--SSRDRAGYYS 439
           +K  D+E   ++ + +D D +RE+ +      +D    + +KEK++H+  SS      + 
Sbjct: 26  DKHKDREHRHKEHK-KDKDKDREKSKHSNSEHKDSEKKHKEKEKTKHKDGSSDKHKDKHK 84

Query: 438 SGDKD 424
             DK+
Sbjct: 85  DRDKE 89

---

>TOP1_CRIGR (Q07050) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
          Length = 767

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
 Frame = -1

Query: 585 DRDIRGRDSDHERERDRAKRHRS----RDKSSGYSDKEKSRHR--SSRDRAGYYSSGDKD 424
           DR+ R ++   ++E+DR K   S    +D    + +KEK++H+  SS      +   DK+
Sbjct: 30  DREHRHKEHKKDKEKDREKSKHSNSEHKDSEKKHKEKEKTKHKDGSSEKHKDKHKDRDKE 89

---

>TOP1_CERAE (Q7YR26) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
          Length = 767

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
 Frame = -1

Query: 585 DRDIRGRDSDHERERDRAKRHRS----RDKSSGYSDKEKSRHR--SSRDRAGYYSSGDKD 424
           DR+ R ++   ++E+DR K   S    +D    + +KEK++H+  SS      +   DK+
Sbjct: 30  DREHRHKEHKKDKEKDREKSKHSNSEHKDSEKKHKEKEKTKHKDGSSEKHKDKHKDRDKE 89

---

>SFR15_HUMAN (O95104) Splicing factor, arginine/serine-rich 15 (CTD-binding|
            SR-like protein RA4)
          Length = 1147

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
 Frame = -1

Query: 600  DQEAXDRDIRG---RDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDR 454
            D++  +RD R    R  D +R RD  +R+R   +SSG+ D+E    R SRDR
Sbjct: 1022 DRDNSNRDRREWGRRSPDRDRHRDLEERNR---RSSGHRDRE----RDSRDR 1066



 Score = 30.8 bits (68), Expect = 3.3
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
 Frame = -1

Query: 573 RGRDSDHERERDRAK---RHRSRDKSSGYSDKEKSRHRSSR 460
           R R S H R R R++   RH  R +S    D+EK R R  +
Sbjct: 453 RSRRSRHRRSRSRSRDRRRHSPRSRSQERRDREKERERRQK 493

---

>BTBDA_PONPY (Q5R585) BTB/POZ domain-containing protein 10|
          Length = 475

 Score = 25.0 bits (53), Expect(2) = 3.4
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 389 PCCKNIRRESTKVLTEREKDLVSSGVTLPIP 297
           PC +N+   + +   EREKD  SS  + P P
Sbjct: 85  PCIRNVTSPTRQHHVEREKDHSSSRPSSPRP 115



 Score = 24.3 bits (51), Expect(2) = 3.4
 Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = -1

Query: 576 IRGRDSDHERERDRAK-RHRSRDKS 505
           + G    HER RDR +   RSRD S
Sbjct: 51  LHGASGGHERSRDRRRSSDRSRDSS 75

---

>BTBDA_HUMAN (Q9BSF8) BTB/POZ domain-containing protein 10|
          Length = 475

 Score = 25.0 bits (53), Expect(2) = 3.4
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 389 PCCKNIRRESTKVLTEREKDLVSSGVTLPIP 297
           PC +N+   + +   EREKD  SS  + P P
Sbjct: 85  PCIRNVTSPTRQHHVEREKDHSSSRPSSPRP 115



 Score = 24.3 bits (51), Expect(2) = 3.4
 Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = -1

Query: 576 IRGRDSDHERERDRAK-RHRSRDKS 505
           + G    HER RDR +   RSRD S
Sbjct: 51  LHGASGGHERSRDRRRSSDRSRDSS 75

---

>YL53_CAEEL (P34433) Hypothetical protein F44E2.3|
          Length = 244

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = -1

Query: 582 RDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYYSSGDKD 424
           R  R R    +R+R+  KR   RD+     D+E+ R R  R+R   + S   +
Sbjct: 3   RRSRSRSRSPKRDREERKRREDRDR-----DRERKRDRKDRERKRRHRSSSSE 50



 Score = 29.3 bits (64), Expect = 9.5
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = -1

Query: 585 DRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSS 463
           DR+ R R  D +R+R+R +  + R++        K RHRSS
Sbjct: 15  DREERKRREDRDRDRERKRDRKDRER--------KRRHRSS 47

---

>SPP2_EMENI (Q5B4R9) Pre-mRNA-splicing factor spp2|
          Length = 523

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDS---DHERERDRAKRHRSRDK-SSGYSDKEKSRHRSSRDR 454
           ++  D+   DRD   R     D +R RDR  R+   D+ SS YS    S  + +RDR
Sbjct: 453 DRRDDRYYRDRDRERRSDPVRDRDRNRDRKSRYYDDDRNSSWYSSSTASSKQRNRDR 509



 Score = 30.4 bits (67), Expect = 4.2
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -1

Query: 567 RDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRA 451
           RD DH R+RDR +  R  +    Y  + +    S RDR+
Sbjct: 396 RDKDHHRDRDRDRDSRRLEYDDTYRYESRRNGSSRRDRS 434

---

>RBM23_HUMAN (Q86U06) Probable RNA-binding protein 23 (RNA-binding motif protein|
           23) (RNA-binding region-containing protein 4) (Splicing
           factor SF2)
          Length = 439

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 17/49 (34%), Positives = 21/49 (42%)
 Frame = -1

Query: 585 DRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYYS 439
           DRD   R +   R   R  RHRSR     +  + +SR     DR  Y S
Sbjct: 80  DRDRYRRRNSRSRSPGRQCRHRSRSWDRRHGSESRSRDHRREDRVHYRS 128

---

>BTBDA_MOUSE (Q80X66) BTB/POZ domain-containing protein 10|
          Length = 475

 Score = 24.6 bits (52), Expect(2) = 4.3
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 389 PCCKNIRRESTKVLTEREKDLVSSGVTLPIP 297
           PC +N+   + +   EREKD  SS  + P P
Sbjct: 85  PCIRNVTSPTRQHHIEREKDHSSSRPSSPRP 115



 Score = 24.3 bits (51), Expect(2) = 4.3
 Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = -1

Query: 576 IRGRDSDHERERDRAK-RHRSRDKS 505
           + G    HER RDR +   RSRD S
Sbjct: 51  LHGASGGHERSRDRRRSSDRSRDSS 75

---

>NO40_MACFA (Q95KF9) Nucleolar protein of 40 kDa (pNO40) (Zinc finger CCHC|
           domain-containing protein 2) (Putative S1 RNA binding
           domain protein) (PS1D protein)
          Length = 193

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHR 469
           +K  D+++ D D     SD E +  +  RH S+D  +    K+K +H+
Sbjct: 145 KKHRDRKSSDSD----SSDSESDTGKRARHTSKDSKAAKKKKKKKKHK 188

---

>CWC25_DEBHA (Q6BNE1) Pre-mRNA-splicing factor CWC25|
          Length = 244

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = -1

Query: 585 DRDIRGRDSDHERERDRAKRHRS---RDKSSGYSDKEKSRHRSSRDRAGYYSSGD 430
           DR        H+ + D+  +HR    R+  SG S K KS HR SRD+     S D
Sbjct: 172 DRSPNRHTFRHKSDNDKVSKHRHSSHRESRSGRS-KLKSSHRHSRDKDSIDGSKD 225

---

>SNUT3_MOUSE (Q8K194) U4/U6.U5 tri-snRNP-associated protein 3|
          Length = 155

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = -1

Query: 573 RGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDR 454
           R R +  +RER R +R RSR++     D+ +SR RS   R
Sbjct: 15  RSRSTSRDRERRRRERSRSRER-----DRRRSRSRSPHRR 49

---

>CVCB_PEA (P13919) Convicilin precursor (Fragment)|
          Length = 386

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRG---RDSDHERERDRAKRHRS-RDKSSGYSDKEKSRHRSSRDR 454
           E+E D+E  D + RG   R+   ER R R +  R+ RD+      +E+ R   S++R
Sbjct: 143 EREEDEEQVDEEWRGSQRREDPEERARLRHREERTKRDRRHQREGEEEERSSESQER 199

---

>PPIL4_GIBZE (Q4IE79) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)|
           (PPIase) (Rotamase)
          Length = 605

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 17/43 (39%), Positives = 19/43 (44%)
 Frame = -1

Query: 600 DQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRH 472
           D+    RD   RD D  R RDR  R R R+K   Y   E   H
Sbjct: 441 DRRGDRRDRDRRDQDRNRYRDRDHRDRGREKDR-YGRDENDHH 482

---

>CCAR1_XENLA (Q641G3) Cell division cycle and apoptosis regulator protein 1|
          Length = 1157

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 18/39 (46%), Positives = 24/39 (61%)
 Frame = -1

Query: 576 IRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSR 460
           I  R  D  RER+R +R RSRD+S     +++SR RS R
Sbjct: 318 ILSRKDDRNRERERERR-RSRDRS---PQRKRSRERSPR 352

---

>YP68_CAEEL (Q09217) Hypothetical protein B0495.8|
          Length = 313

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
 Frame = -1

Query: 597 QEAXDRDIRGRDSDH---ERERDRAKRHRSRDKSSGYSDKEKSRHRSSRD 457
           +E+  R  RG D      +R+RDR  R RSR +   Y   ++   R  RD
Sbjct: 253 RESYGRRDRGGDRGEYRGDRDRDRRNRDRSRSRDRSYRRDDRGDRRYDRD 302

---

>SAFB1_RAT (O88453) Scaffold attachment factor B (Scaffold attachment factor|
           B1) (SAF-B)
          Length = 931

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = -1

Query: 573 RGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYY 442
           + RDS+  RER+R +  R +   + +  +E+ R   +R+R  ++
Sbjct: 635 KSRDSESRRERERERSEREQRLQAQWEREERERLEIARERLAFH 678

---

>NO40_HUMAN (Q9NP64) Nucleolar protein of 40 kDa (pNO40) (Zinc finger CCHC|
           domain-containing protein 7) (Putative S1 RNA binding
           domain protein) (PS1D protein) (Pnn-interacting
           nucleolar protein)
          Length = 241

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = -1

Query: 612 EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHR 469
           +K  D+++ D D     SD E +  +  RH S+D  +    K+K +H+
Sbjct: 193 KKHRDRKSSDSD----SSDSESDTGKRARHTSKDSKAAKKKKKKKKHK 236

---

>CYP8_CAEEL (P52016) Peptidyl-prolyl cis-trans isomerase 8 (EC 5.2.1.8)|
           (PPIase) (Rotamase) (Cyclophilin-8)
          Length = 466

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -1

Query: 597 QEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAG 448
           +E   +D  GR+   +R R    RH  RD+ S    + + R+R   DR+G
Sbjct: 220 REEKKKDKHGREEKRDRRRRSNDRH-GRDRRSRSRSQSRDRNRRRDDRSG 268

---

>NCOR1_XENLA (Q8QG78) Nuclear receptor corepressor 1 (N-CoR1) (N-CoR) (xN-CoR)|
          Length = 2498

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -1

Query: 573  RGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHR 469
            R R+ + ERERDR +    R++    SD+E+ R R
Sbjct: 1769 RERERERERERDREREKEQRERE---SDRERERDR 1800

---

>XE7_HUMAN (Q02040) B-lymphocyte antigen precursor (B-lymphocyte surface|
           antigen) (721P) (Protein XE7)
          Length = 695

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
 Frame = -1

Query: 573 RGRDSDHERER-----DRAKRHRSRDKSSGYSDKEKSRHRSSRDRA 451
           R    DH R R     DR +R RSR++  G + ++ SRHR   +R+
Sbjct: 637 RSTSPDHTRSRRSHSKDRHRRERSRER-RGSASRKHSRHRRRSERS 681

---

>CAC1B_DISOM (P56698) Probable voltage-dependent N-type calcium channel alpha-1B|
            subunit (Voltage-gated calcium channel alpha subunit
            Cav2.2) (DOE-4)
          Length = 2326

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -1

Query: 609  KEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKS-SGYSDKEKSRHRSSR 460
            KE ++E   RD +GR  +  R  +  +RH     S     ++E  RHRS R
Sbjct: 887  KETEKE---RDEKGRKGERSRSHEGGRRHHHAQSSLDDAPEREHRRHRSHR 934

---

>CCNT_DROME (O96433) Cyclin-T|
          Length = 1097

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 14/47 (29%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
 Frame = -1

Query: 561  SDHERERDRAKRHRSRDKSSGYSDK-EKSRHRSSRDRAGYYSSGDKD 424
            S+ ++++D+ K H+ +DKS   ++K E+ +H+  + +    S G KD
Sbjct: 870  SEKKKKKDKHK-HKEKDKSKDKTEKEERKKHKKDKQKDRSGSGGSKD 915

---

>CBX8_HUMAN (Q9HC52) Chromobox protein homolog 8 (Polycomb 3 homolog) (Pc3)|
           (HPC3) (Rectachrome 1)
          Length = 389

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 10/50 (20%)
 Frame = -1

Query: 573 RGRDSDHERERDRAK-------RHRSRDKSSGYS---DKEKSRHRSSRDR 454
           R RD D +RERDR +       R R R++  G S   DK  S   SS+ R
Sbjct: 150 RDRDRDRDRERDRERERERERERERERERERGTSRVDDKPSSPGDSSKKR 199

---

>CWC22_YARLI (Q6C8C5) Pre-mRNA-splicing factor CWC22|
          Length = 954

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = -1

Query: 573 RGRDSDHERERDRAK-RHRSRDKSSGYSDKEKSRHRSSR 460
           R R+    RER R + R R+RD    +SD    R RS R
Sbjct: 6   RERERSQSRERSRTRERSRTRDSKRDHSDSRSLRRRSYR 44

---

>SWC5_ASPFU (Q4WRE2) SWR1-complex protein 5|
          Length = 359

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -1

Query: 606 EVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKE 484
           ++D +  D D+ G DSD E     AKR ++    +   D+E
Sbjct: 28  QLDPDQEDADLTGSDSDDEATEPAAKRRKTGPTKAATEDQE 68

---

>SFR16_MOUSE (Q8CFC7) Splicing factor, arginine/serine-rich 16 (Suppressor of|
           white-apricot homolog 2) (Clk4-associating SR-related
           protein)
          Length = 653

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -1

Query: 543 RDRAKRHRSRDKSSGYSDKEKSRHRSS-RDRAGYYSSG 433
           R+ + R RS   S+  +   +S  RSS R R GYY SG
Sbjct: 354 RNASTRRRSSSSSASRTSSSRSSSRSSSRSRRGYYRSG 391

---

>CCNL1_BRARE (Q7ZVX0) Cyclin-L1|
          Length = 498

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
 Frame = -1

Query: 603 VDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYS---DKEKSRHRSSRDRAGYY 442
           + Q   DRD   R S+  R  ++ +R RSR +S+      D++  +H+  R  +G++
Sbjct: 411 ISQLRTDRD---RPSETSRHSNKRRRSRSRSRSNSRERVRDRDHIKHKQERSGSGHH 464

---

>DDX3X_MOUSE (Q62167) ATP-dependent RNA helicase DDX3X (EC 3.6.1.-) (DEAD box|
           protein 3, X-chromosomal) (DEAD box RNA helicase DEAD3)
           (mDEAD3) (Embryonic RNA helicase) (D1Pas1-related
           sequence 2)
          Length = 661

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
 Frame = -1

Query: 603 VDQEAXDRDIRGRDSDHERERDRAKRH-----RSRDKSSGYSDKEKSRHRSSRDRAGYYS 439
           +DQ+    D+   D+          R+     R+R+ + G+ DK+ S   SS+D+  Y S
Sbjct: 11  LDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNREATKGFYDKDSSGWSSSKDKDAYSS 70

Query: 438 SGDK 427
            G +
Sbjct: 71  FGSR 74

---

>DDX3X_HUMAN (O00571) ATP-dependent RNA helicase DDX3X (EC 3.6.1.-) (DEAD box|
           protein 3, X-chromosomal) (Helicase-like protein 2)
           (HLP2) (DEAD box, X isoform)
          Length = 661

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
 Frame = -1

Query: 603 VDQEAXDRDIRGRDSDHERERDRAKRH-----RSRDKSSGYSDKEKSRHRSSRDRAGYYS 439
           +DQ+    D+   D+          R+     R+R+ + G+ DK+ S   SS+D+  Y S
Sbjct: 11  LDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNREATKGFYDKDSSGWSSSKDKDAYSS 70

Query: 438 SGDK 427
            G +
Sbjct: 71  FGSR 74

---

>VP40_SCMVC (P16046) Capsid protein P40 [Contains: Assemblin (EC 3.4.21.97)|
           (Protease); Gene APNG.7 protein; Capsid assembly
           protein; Gene APNG.5 protein; Gene APNG.4 protein;
           C-terminal peptide]
          Length = 589

 Score = 29.3 bits (64), Expect = 9.5
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -1

Query: 564 DSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRD 457
           ++DH + R R K H  RD ++  SD +  R+   R+
Sbjct: 448 EADHGKARKRLKAHHGRDNNNSGSDAKGDRYDDIRE 483

---

>PRP40_MOUSE (Q9R1C7) Pre-mRNA-processing factor 40 homolog A (Formin-binding|
           protein 3) (Formin-binding protein 11) (FBP 11)
          Length = 953

 Score = 29.3 bits (64), Expect = 9.5
 Identities = 12/39 (30%), Positives = 24/39 (61%)
 Frame = -1

Query: 564 DSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAG 448
           +SD ERE+D+ ++ R  +K      + +S+H+S + + G
Sbjct: 883 ESDTEREKDKKEKDRDSEKDRS-RQRSESKHKSPKKKTG 920

---

>IF3A_MOUSE (P23116) Eukaryotic translation initiation factor 3 subunit 10 (eIF-3|
            theta) (eIF3 p167) (eIF3 p180) (eIF3 p185) (eIF3a) (p162
            protein) (Centrosomin)
          Length = 1344

 Score = 29.3 bits (64), Expect = 9.5
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = -1

Query: 567  RDSDHERERDRAKRHRSRDKSSGYSD-KEKSRHRSSRDRAG 448
            RDS    +RDR  R R RD      D +++   R  RDR G
Sbjct: 1221 RDSSRRDDRDREDRRRDRDDRRDLRDLRDRRDLRDDRDRRG 1261

---

>TRA2_DROME (P19018) Transformer-2 sex-determining protein|
          Length = 264

 Score = 29.3 bits (64), Expect = 9.5
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 8/54 (14%)
 Frame = -1

Query: 573 RGRDSDHE-----RERDRAKRHRSRDKSSGYSDKEKSRH---RSSRDRAGYYSS 436
           + R SD++     R +  + R RSR +SS  S   + RH   RSSRDR   + S
Sbjct: 36  KDRRSDYDYCGSRRHQRSSSRRRSRSRSSSESPPPEPRHRSGRSSRDRERMHKS 89

---

>RERE_RAT (Q62901) Arginine-glutamic acid dipeptide repeats protein|
           (Atrophin-1-related protein)
          Length = 1559

 Score = 29.3 bits (64), Expect = 9.5
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -1

Query: 573 RGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSS 463
           + +D D E++RDR  R R RDK     + E +R R S
Sbjct: 5   KDKDKDKEKDRDR-DRDRERDKRDKARESENARPRRS 40

---

>CTDP1_HUMAN (Q9Y5B0) RNA polymerase II subunit A C-terminal domain phosphatase|
           (EC 3.1.3.16) (TFIIF-associating CTD phosphatase)
          Length = 961

 Score = 29.3 bits (64), Expect = 9.5
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +2

Query: 32  LQQYXMHISLGSCNQNNTK-VFHVPPGHKKPGYHAVTITHCQKPFMSKVA 178
           L Q  +H +   C Q + K +FH   G  +P  H     HC K F+ K+A
Sbjct: 189 LDQTLIHTTEQHCQQMSNKGIFHFQLGRGEPMLHTRLRPHC-KDFLEKIA 237

---

>DNMT1_HUMAN (P26358) DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Dnmt1)|
           (DNA methyltransferase HsaI) (DNA MTase HsaI) (MCMT)
           (M.HsaI)
          Length = 1616

 Score = 29.3 bits (64), Expect = 9.5
 Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = -1

Query: 594 EAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRD-RAGYYSSGDKD 424
           E  +R   G  ++ E ERD  +  R R ++   + K+K +    R+ RAG  +  D+D
Sbjct: 220 EEPERAKSGTRTEKEEERDEKEEKRLRSQTKEPTPKQKLKEEPDREARAGVQADEDED 277

---

>IF3A_HUMAN (Q14152) Eukaryotic translation initiation factor 3 subunit 10 (eIF-3|
            theta) (eIF3 p167) (eIF3 p180) (eIF3 p185) (eIF3a)
          Length = 1382

 Score = 29.3 bits (64), Expect = 9.5
 Identities = 19/63 (30%), Positives = 30/63 (47%)
 Frame = -1

Query: 612  EKEVDQEAXDRDIRGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSSRDRAGYYSSG 433
            EKE D++  DR+    D D ERERDR +     D+     D+   R   + + + +  S 
Sbjct: 1206 EKERDRDNQDRE--ENDKDPERERDRERDVDREDRFRRPRDEGGWRRGPAEESSSWRDSS 1263

Query: 432  DKD 424
             +D
Sbjct: 1264 RRD 1266

---

>RERE_MOUSE (Q80TZ9) Arginine-glutamic acid dipeptide repeats protein|
           (Atrophin-2)
          Length = 1558

 Score = 29.3 bits (64), Expect = 9.5
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -1

Query: 573 RGRDSDHERERDRAKRHRSRDKSSGYSDKEKSRHRSS 463
           + +D D E++RDR  R R RDK     + E +R R S
Sbjct: 5   KDKDKDKEKDRDR-DRDRERDKRDKARESENARPRRS 40


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,259,306
Number of Sequences: 219361
Number of extensions: 1592262
Number of successful extensions: 6561
Number of sequences better than 10.0: 170
Number of HSP's better than 10.0 without gapping: 5032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6122
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5481822624
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

---