ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd24b07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|CR389834.1| Gallus gallus finished cDNA, clone ChEST266j3 44 0.15
2gb|AY110373.1| Zea mays CL46074_1 mRNA sequence 42 0.59
3gb|CP000025.1| Campylobacter jejuni RM1221, complete genome 40 2.3
4gb|AC123854.3| Mus musculus BAC clone RP23-328J8 from chromosome... 40 2.3
5gb|CP000302.1| Shewanella denitrificans OS217, complete genome 40 2.3
6emb|AL139079.2|CJ11168X6 Campylobacter jejuni subsp. jejuni NCTC... 40 2.3
7gb|AC079331.11| Homo sapiens chromosome 17, clone RP11-360N9, co... 40 2.3
8gb|AC072041.21| Homo sapiens 3 BAC RP11-450A18 (Roswell Park Can... 40 2.3
9gb|AC116350.2| Homo sapiens chromosome 5 clone RP11-357F12, comp... 40 2.3
10gb|AC109443.2| Homo sapiens chromosome 5 clone CTD-2070B15, comp... 40 2.3
11gb|AC092018.2| Homo sapiens chromosome 1 clone RP11-543G21, comp... 40 2.3
12gb|AC021082.4|AC021082 Homo sapiens chromosome 5 clone CTC-431D1... 40 2.3
13gb|AC108134.3| Homo sapiens chromosome 16 clone RP11-473M20, com... 40 2.3
14emb|AJ003147.1|HSAJ03147 Homo sapiens complete genomic sequence ... 40 2.3
15gb|AC006534.10| Homo sapiens chromosome 17, clone RP11-557B23, c... 40 2.3
16gb|AF067609.1| Caenorhabditis elegans cosmid C23H5, complete seq... 38 9.2
17gb|AC148336.4| Mus musculus BAC clone RP23-21J15 from chromosome... 38 9.2
18gb|AC009712.22| Homo sapiens chromosome 15, clone RP11-361M10, c... 38 9.2
19gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 38 9.2
20gb|AY450400.1| Campylobacter fetus strain 85-387 surface layer p... 38 9.2
21gb|AC139174.3| Oryza sativa chromosome 3 BAC OSJNBb0065L20 genom... 38 9.2
22gb|AC138768.3| Mus musculus BAC clone RP24-465E14 from chromosom... 38 9.2
23gb|AF067943.1| Caenorhabditis elegans cosmid F59B1, complete seq... 38 9.2
24ref|XM_775809.1| PREDICTED: Strongylocentrotus purpuratus simila... 38 9.2
25emb|AL390994.30| Human DNA sequence from clone RP11-190J18 on ch... 38 9.2
26gb|AE014821.1| Plasmodium falciparum 3D7 chromosome 14 section 6... 38 9.2
27gb|AC099804.3| Homo sapiens chromosome 17, clone CTD-2357A8, com... 38 9.2
28gb|AC154873.6| Mus musculus chromosome 1, clone RP23-71J17, comp... 38 9.2
29gb|AC103874.2| Homo sapiens chromosome 15, clone RP11-907B8, com... 38 9.2
30gb|AC153353.19| Medicago truncatula clone mth2-182o15, complete ... 38 9.2
31emb|BX005300.5| Zebrafish DNA sequence from clone CH211-87G21, c... 38 9.2
32emb|BX248230.21| Zebrafish DNA sequence from clone CH211-213O11 ... 38 9.2
33dbj|AK031070.1| Mus musculus 13 days embryo forelimb cDNA, RIKEN... 38 9.2
34emb|BX510931.8| Zebrafish DNA sequence from clone CH211-132M19 i... 38 9.2
35emb|BX248233.7| Zebrafish DNA sequence from clone CH211-125N11 i... 38 9.2
36dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.2
37dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.2
38gb|AC078863.15|AC078863 Mus musculus BAC RP23-406N7 (Roswell Pa... 38 9.2
39gb|M32883.1|ALFLEGHEMA Medicago sativa leghemoglobin gene, compl... 38 9.2
40gb|AC022966.13| Homo sapiens chromosome 17, clone RP11-323N12, c... 38 9.2
41dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic D... 38 9.2
42emb|BX321888.21| Zebrafish DNA sequence from clone DKEYP-47D4 in... 38 9.2
43emb|BX510640.4| Zebrafish DNA sequence from clone RP71-57J15 in ... 38 9.2
44emb|AL929321.12| Zebrafish DNA sequence from clone CH211-51A20, ... 38 9.2
45dbj|AP006698.1| Lotus japonicus genomic DNA, chromosome 1, clone... 38 9.2
46emb|AL929186.7| Mouse DNA sequence from clone RP23-399K8 on chro... 38 9.2 
>emb|CR389834.1| Gallus gallus finished cDNA, clone ChEST266j3
          Length = 920

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 139 aaccatcagccccatgccaggc 160
           ||||||||||||||||||||||
Sbjct: 49  aaccatcagccccatgccaggc 28
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>gb|AY110373.1| Zea mays CL46074_1 mRNA sequence
          Length = 661

 Score = 42.1 bits (21), Expect = 0.59
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 150 ccatgccaggcccatataatgtccttgagtgctggcc 186
           |||||||||||||| |  |||||||| ||||||||||
Sbjct: 271 ccatgccaggcccagactatgtccttcagtgctggcc 307
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>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome
          Length = 1777831

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 67      cttaaaaatgtaaaaaatgc 86
               ||||||||||||||||||||
Sbjct: 1653276 cttaaaaatgtaaaaaatgc 1653295
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>gb|AC123854.3| Mus musculus BAC clone RP23-328J8 from chromosome 1, complete sequence
          Length = 187979

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 66     gcttaaaaatgtaaaaaatg 85
              ||||||||||||||||||||
Sbjct: 164825 gcttaaaaatgtaaaaaatg 164844
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>gb|CP000302.1| Shewanella denitrificans OS217, complete genome
          Length = 4545906

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 61      ctcgagcttaaaaatgtaaa 80
               ||||||||||||||||||||
Sbjct: 4338809 ctcgagcttaaaaatgtaaa 4338790
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>emb|AL139079.2|CJ11168X6 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment
             6/6
          Length = 155932

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 67    cttaaaaatgtaaaaaatgc 86
             ||||||||||||||||||||
Sbjct: 26561 cttaaaaatgtaaaaaatgc 26580
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>gb|AC079331.11| Homo sapiens chromosome 17, clone RP11-360N9, complete sequence
          Length = 182535

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    tttatttgtgacaaagagcc 32
             ||||||||||||||||||||
Sbjct: 28009 tttatttgtgacaaagagcc 28028
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>gb|AC072041.21| Homo sapiens 3 BAC RP11-450A18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 111809

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   gctacacttgatgctcctgc 137
             ||||||||||||||||||||
Sbjct: 23628 gctacacttgatgctcctgc 23609
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>gb|AC116350.2| Homo sapiens chromosome 5 clone RP11-357F12, complete sequence
          Length = 183009

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 36     ttatgtagagtacataacac 55
              ||||||||||||||||||||
Sbjct: 155894 ttatgtagagtacataacac 155875
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>gb|AC109443.2| Homo sapiens chromosome 5 clone CTD-2070B15, complete sequence
          Length = 123037

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 153    tgccaggcccatataatgtc 172
              ||||||||||||||||||||
Sbjct: 122754 tgccaggcccatataatgtc 122735
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>gb|AC092018.2| Homo sapiens chromosome 1 clone RP11-543G21, complete sequence
          Length = 173135

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   atctaaagctacacttgatg 130
             ||||||||||||||||||||
Sbjct: 86856 atctaaagctacacttgatg 86875
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>gb|AC021082.4|AC021082 Homo sapiens chromosome 5 clone CTC-431D1, complete sequence
          Length = 118645

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 153   tgccaggcccatataatgtc 172
             ||||||||||||||||||||
Sbjct: 58404 tgccaggcccatataatgtc 58423
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>gb|AC108134.3| Homo sapiens chromosome 16 clone RP11-473M20, complete sequence
          Length = 180354

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 144   tcagccccatgccaggccca 163
             ||||||||||||||||||||
Sbjct: 86478 tcagccccatgccaggccca 86459
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>emb|AJ003147.1|HSAJ03147 Homo sapiens complete genomic sequence between D16S3070 and D16S3275,
             containing Familial Mediterranean Fever gene disease
          Length = 239566

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 144   tcagccccatgccaggccca 163
             ||||||||||||||||||||
Sbjct: 34164 tcagccccatgccaggccca 34145
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>gb|AC006534.10| Homo sapiens chromosome 17, clone RP11-557B23, complete sequence
          Length = 216789

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    tttatttgtgacaaagagcc 32
             ||||||||||||||||||||
Sbjct: 52993 tttatttgtgacaaagagcc 52974
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>gb|AF067609.1| Caenorhabditis elegans cosmid C23H5, complete sequence
          Length = 42985

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 67   cttaaaaatgtaaaaaatg 85
            |||||||||||||||||||
Sbjct: 5448 cttaaaaatgtaaaaaatg 5430
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>gb|AC148336.4| Mus musculus BAC clone RP23-21J15 from chromosome 18, complete sequence
          Length = 238060

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 87     gtaagtaaacataacaatt 105
              |||||||||||||||||||
Sbjct: 170365 gtaagtaaacataacaatt 170347
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>gb|AC009712.22| Homo sapiens chromosome 15, clone RP11-361M10, complete sequence
          Length = 213746

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 66     gcttaaaaatgtaaaaaat 84
              |||||||||||||||||||
Sbjct: 187332 gcttaaaaatgtaaaaaat 187350
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 64       gagcttaaaaatgtaaaaa 82
                |||||||||||||||||||
Sbjct: 25594278 gagcttaaaaatgtaaaaa 25594260
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>gb|AY450400.1| Campylobacter fetus strain 85-387 surface layer protein SapB11
           (sapB11) gene, complete cds
          Length = 3411

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 103 attgagacatctaaagctacacttgat 129
           |||||||||||||| |||| |||||||
Sbjct: 115 attgagacatctaaggctatacttgat 141
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>gb|AC139174.3| Oryza sativa chromosome 3 BAC OSJNBb0065L20 genomic sequence, complete
              sequence
          Length = 167427

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 64     gagcttaaaaatgtaaaaa 82
              |||||||||||||||||||
Sbjct: 108073 gagcttaaaaatgtaaaaa 108091
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>gb|AC138768.3| Mus musculus BAC clone RP24-465E14 from chromosome 18, complete sequence
          Length = 158065

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 87     gtaagtaaacataacaatt 105
              |||||||||||||||||||
Sbjct: 115665 gtaagtaaacataacaatt 115683
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>gb|AF067943.1| Caenorhabditis elegans cosmid F59B1, complete sequence
          Length = 43152

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 67   cttaaaaatgtaaaaaatg 85
            |||||||||||||||||||
Sbjct: 4956 cttaaaaatgtaaaaaatg 4974
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>ref|XM_775809.1| PREDICTED: Strongylocentrotus purpuratus similar to SHC SH2-domain
            binding protein 1 (LOC575406), mRNA
          Length = 3237

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 67   cttaaaaatgtaaaaaatg 85
            |||||||||||||||||||
Sbjct: 3058 cttaaaaatgtaaaaaatg 3076
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>emb|AL390994.30| Human DNA sequence from clone RP11-190J18 on chromosome 1 Contains
            the 5' end of the gene for a novel protein (KIAA1626),
            complete sequence
          Length = 115136

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 144  tcagccccatgccaggccc 162
            |||||||||||||||||||
Sbjct: 2736 tcagccccatgccaggccc 2754
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>gb|AE014821.1| Plasmodium falciparum 3D7 chromosome 14 section 6 of 13 of the complete
              sequence
          Length = 250823

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 66     gcttaaaaatgtaaaaaat 84
              |||||||||||||||||||
Sbjct: 191141 gcttaaaaatgtaaaaaat 191159
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>gb|AC099804.3| Homo sapiens chromosome 17, clone CTD-2357A8, complete sequence
          Length = 119922

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 61    ctcgagcttaaaaatgtaaaaaa 83
             ||||| |||||||||||||||||
Sbjct: 98814 ctcgatcttaaaaatgtaaaaaa 98792
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>gb|AC154873.6| Mus musculus chromosome 1, clone RP23-71J17, complete sequence
          Length = 256719

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 124   cttgatgctcctgctaacc 142
             |||||||||||||||||||
Sbjct: 93709 cttgatgctcctgctaacc 93691
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>gb|AC103874.2| Homo sapiens chromosome 15, clone RP11-907B8, complete sequence
          Length = 158897

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 66     gcttaaaaatgtaaaaaat 84
              |||||||||||||||||||
Sbjct: 146768 gcttaaaaatgtaaaaaat 146750
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>gb|AC153353.19| Medicago truncatula clone mth2-182o15, complete sequence
          Length = 86812

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 115   aaagctacacttgatgctc 133
             |||||||||||||||||||
Sbjct: 49533 aaagctacacttgatgctc 49551
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>emb|BX005300.5| Zebrafish DNA sequence from clone CH211-87G21, complete sequence
          Length = 110022

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 67    cttaaaaatgtaaaaaatg 85
             |||||||||||||||||||
Sbjct: 57194 cttaaaaatgtaaaaaatg 57212
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>emb|BX248230.21| Zebrafish DNA sequence from clone CH211-213O11 in linkage group 11,
            complete sequence
          Length = 217432

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 68   ttaaaaatgtaaaaaatgc 86
            |||||||||||||||||||
Sbjct: 6099 ttaaaaatgtaaaaaatgc 6081
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>dbj|AK031070.1| Mus musculus 13 days embryo forelimb cDNA, RIKEN full-length enriched
            library, clone:5930402D05 product:weakly similar to CDNA
            FLJ10486 FIS, CLONE NT2RP2000205 [Homo sapiens], full
            insert sequence
          Length = 3611

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 87   gtaagtaaacataacaatt 105
            |||||||||||||||||||
Sbjct: 1785 gtaagtaaacataacaatt 1803
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>emb|BX510931.8| Zebrafish DNA sequence from clone CH211-132M19 in linkage group 21,
             complete sequence
          Length = 181237

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 65    agcttaaaaatgtaaaaaa 83
             |||||||||||||||||||
Sbjct: 53761 agcttaaaaatgtaaaaaa 53743
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>emb|BX248233.7| Zebrafish DNA sequence from clone CH211-125N11 in linkage group 10,
              complete sequence
          Length = 157428

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 68     ttaaaaatgtaaaaaatgc 86
              |||||||||||||||||||
Sbjct: 122713 ttaaaaatgtaaaaaatgc 122695
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 64       gagcttaaaaatgtaaaaa 82
                |||||||||||||||||||
Sbjct: 25685587 gagcttaaaaatgtaaaaa 25685569
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 1       aaaaatggaacctttatttgtga 23
               ||||||||||| |||||||||||
Sbjct: 4125082 aaaaatggaacatttatttgtga 4125104
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>gb|AC078863.15|AC078863 Mus musculus  BAC RP23-406N7 (Roswell Park Cancer Institute Mouse BAC
              Library) complete sequence
          Length = 188008

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 65     agcttaaaaatgtaaaaaa 83
              |||||||||||||||||||
Sbjct: 102512 agcttaaaaatgtaaaaaa 102494
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>gb|M32883.1|ALFLEGHEMA Medicago sativa leghemoglobin gene, complete cds
          Length = 3228

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 68  ttaaaaatgtaaaaaatgc 86
           |||||||||||||||||||
Sbjct: 714 ttaaaaatgtaaaaaatgc 732
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>gb|AC022966.13| Homo sapiens chromosome 17, clone RP11-323N12, complete sequence
          Length = 184139

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 61    ctcgagcttaaaaatgtaaaaaa 83
             ||||| |||||||||||||||||
Sbjct: 13009 ctcgatcttaaaaatgtaaaaaa 12987
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>dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1077_E05
          Length = 116305

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 1     aaaaatggaacctttatttgtga 23
             ||||||||||| |||||||||||
Sbjct: 35096 aaaaatggaacatttatttgtga 35118
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>emb|BX321888.21| Zebrafish DNA sequence from clone DKEYP-47D4 in linkage group 20,
             complete sequence
          Length = 176463

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 67    cttaaaaatgtaaaaaatg 85
             |||||||||||||||||||
Sbjct: 34531 cttaaaaatgtaaaaaatg 34549
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>emb|BX510640.4| Zebrafish DNA sequence from clone RP71-57J15 in linkage group 19,
             complete sequence
          Length = 139917

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 68    ttaaaaatgtaaaaaatgc 86
             |||||||||||||||||||
Sbjct: 93902 ttaaaaatgtaaaaaatgc 93884
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>emb|AL929321.12| Zebrafish DNA sequence from clone CH211-51A20, complete sequence
          Length = 193470

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 2     aaaatggaacctttatttgtgacaaag 28
             ||||||||| |||| ||||||||||||
Sbjct: 99538 aaaatggaatctttttttgtgacaaag 99512
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>dbj|AP006698.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT04O06, TM0487,
             complete sequence
          Length = 108174

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 65    agcttaaaaatgtaaaaaa 83
             |||||||||||||||||||
Sbjct: 92926 agcttaaaaatgtaaaaaa 92944
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>emb|AL929186.7| Mouse DNA sequence from clone RP23-399K8 on chromosome 2, complete
              sequence
          Length = 198573

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 65     agcttaaaaatgtaaaaaa 83
              |||||||||||||||||||
Sbjct: 104737 agcttaaaaatgtaaaaaa 104755


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,960,482
Number of Sequences: 3902068
Number of extensions: 1960482
Number of successful extensions: 166202
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 165847
Number of HSP's gapped (non-prelim): 355
length of query: 186
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 164
effective length of database: 17,147,199,772
effective search space: 2812140762608
effective search space used: 2812140762608
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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