Clone Name | rbasd23m02 |
---|---|
Clone Library Name | barley_pub |
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 1 taaactaccatcacatagaagagagttgcgatcatcacga 40 |||||||||||||||||||||||||| ||| ||||||||| Sbjct: 323358 taaactaccatcacatagaagagagtcgcggtcatcacga 323319
>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence Length = 190469 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 1 taaactaccatcacatagaagagagttgcgatcatcacga 40 ||||||| ||||||||||||||||| |||| ||||||||| Sbjct: 101175 taaactatcatcacatagaagagagctgcggtcatcacga 101214
>ref|XM_642108.1| Dictyostelium discoideum hypothetical protein (DDB0216539), partial mRNA Length = 2007 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 254 aatcttcatctccatcatcatcttcatca 282 ||||||||||| ||||||||||||||||| Sbjct: 524 aatcttcatcttcatcatcatcttcatca 552
>gb|AC077689.9| Mus Musculus Strain C57BL6/J Chromosome 5 RP23-301H20, complete sequence Length = 213462 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 255 atcttcatctccatcatcatcttcatcac 283 |||||||||| |||||||||||||||||| Sbjct: 23860 atcttcatctacatcatcatcttcatcac 23888
>gb|AC068627.16| Mus Musculus Chromosome 5 RP23-389F6, complete sequence Length = 180673 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 255 atcttcatctccatcatcatcttcatcac 283 |||||||||| |||||||||||||||||| Sbjct: 145648 atcttcatctacatcatcatcttcatcac 145676
>gb|AY089999.1| Lolium perenne CACTA-family transposon sequence Length = 12483 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 3 aactaccatcacatagaagagagtt 27 ||||||||||||||||||||||||| Sbjct: 11769 aactaccatcacatagaagagagtt 11745
>ref|XM_633386.1| Dictyostelium discoideum hypothetical protein (DDB0186144), partial mRNA Length = 5040 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Minus Query: 258 ttcatctccatcatcatcttcatcacca 285 |||||| ||||||||||||||||||||| Sbjct: 2613 ttcatcaccatcatcatcttcatcacca 2586
>ref|XM_418879.1| PREDICTED: Gallus gallus similar to Enhancer of zeste homolog 2 (ENX-1) (LOC420784), mRNA Length = 3027 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatca 282 |||||||||||||||||||||||| Sbjct: 1100 tcatctccatcatcatcttcatca 1077
>ref|XM_723035.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY07296) partial mRNA Length = 3160 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Minus Query: 255 atcttcatctccatcatcatcttcatca 282 ||||||||||||||| |||||||||||| Sbjct: 892 atcttcatctccatcttcatcttcatca 865 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 255 atcttcatctccatcatcatcttcatc 281 ||||||||||||||| ||||||||||| Sbjct: 910 atcttcatctccatcttcatcttcatc 884
>emb|CR406689.1| Gallus gallus finished cDNA, clone ChEST766d20 Length = 887 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatca 282 |||||||||||||||||||||||| Sbjct: 541 tcatctccatcatcatcttcatca 518
>gb|AC134312.3| Homo sapiens chromosome 16 clone RP11-863P13, complete sequence Length = 205610 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 259 tcatctccatcatcatcttcatcaccaa 286 ||||||||||||||||| |||||||||| Sbjct: 56221 tcatctccatcatcatcatcatcaccaa 56248 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 259 tcatctccatcatcatcttcatcaccaa 286 ||||||||||||||||| |||||||||| Sbjct: 55627 tcatctccatcatcatcatcatcaccaa 55654
>gb|AC127455.4| Homo sapiens chromosome 16 clone CTD-3057O21, complete sequence Length = 184641 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatcaccaa 286 ||||||||||||||||| |||||||||| Sbjct: 41155 tcatctccatcatcatcatcatcaccaa 41128 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatcaccaa 286 ||||||||||||||||| |||||||||| Sbjct: 40564 tcatctccatcatcatcatcatcaccaa 40537
>ref|XM_637842.1| Dictyostelium discoideum hypothetical protein (DDB0169000), partial mRNA Length = 636 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 254 aatcttcatctccatcatcatcttcatcaccaaag 288 |||||||||| ||||||||||||||||| ||||| Sbjct: 371 aatcttcatcatcatcatcatcttcatcatcaaag 405
>ref|XM_630306.1| Dictyostelium discoideum hypothetical protein (DDB0219645), partial mRNA Length = 3294 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatcacca 285 ||||||| ||||||||||||||||||| Sbjct: 617 tcatctctatcatcatcttcatcacca 591
>ref|XM_631281.1| Dictyostelium discoideum hypothetical protein (DDB0188272), partial mRNA Length = 1101 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 252 ataatcttcatctccatcatcatcttcatca 282 ||||||||||||| |||||| |||||||||| Sbjct: 930 ataatcttcatcttcatcataatcttcatca 900 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 252 ataatcttcatctccatcatcatcttcatca 282 |||||||||||| ||||||| |||||||||| Sbjct: 897 ataatcttcatcaccatcataatcttcatca 867
>ref|XM_629549.1| Dictyostelium discoideum hypothetical protein (DDB0184502), partial mRNA Length = 774 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 255 atcttcatctccatcatcatcttcatc 281 |||||||||| |||||||||||||||| Sbjct: 384 atcttcatcttcatcatcatcttcatc 358
>gb|AC099038.2| Drosophila melanogaster clone BACR28A23, complete sequence Length = 164826 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 255 atcttcatctccatcatcatcttcatc 281 ||||||||||||||| ||||||||||| Sbjct: 140496 atcttcatctccatcttcatcttcatc 140470
>gb|BC073408.1| Xenopus laevis MGC80871 protein, mRNA (cDNA clone MGC:80871 IMAGE:5514977), complete cds Length = 1053 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 256 tcttcatctccatcatcatcttcatca 282 ||||||||| ||||||||||||||||| Sbjct: 841 tcttcatcttcatcatcatcttcatca 815
>gb|AC134859.4| Mus musculus BAC clone RP23-363G20 from chromosome 9, complete sequence Length = 182883 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 256 tcttcatctccatcatcatcttcatca 282 |||||||||||||||||||| |||||| Sbjct: 143408 tcttcatctccatcatcatcatcatca 143434
>ref|XM_651036.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (17.t00039) partial mRNA Length = 708 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 256 tcttcatctccatcatcatcttcatca 282 ||||||||| ||||||||||||||||| Sbjct: 146 tcttcatcttcatcatcatcttcatca 120 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatca 282 |||||| ||||||||||||||||| Sbjct: 569 tcatcttcatcatcatcttcatca 546 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatca 282 |||||| ||||||||||||||||| Sbjct: 557 tcatcttcatcatcatcttcatca 534
>ref|XM_722050.1| Plasmodium yoelii yoelii str. 17XNL ATPase class II type 9A (PY06483) partial mRNA Length = 4272 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 256 tcttcatctccatcatcatcttcatca 282 ||||||||| ||||||||||||||||| Sbjct: 1070 tcttcatcttcatcatcatcttcatca 1044
>ref|XM_718714.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY03623) partial mRNA Length = 1026 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 255 atcttcatctccatcatcatcttcatc 281 |||||||||| |||||||||||||||| Sbjct: 270 atcttcatctgcatcatcatcttcatc 244 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 255 atcttcatctccatcatcatcttcatc 281 |||||||||| |||||||||||||||| Sbjct: 252 atcttcatctgcatcatcatcttcatc 226
>gb|AC011899.5| Homo sapiens BAC clone RP11-452C13 from 7, complete sequence Length = 214229 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 255 atcttcatctccatcatcatcttcatcacca 285 ||||||||| ||| ||||||||||||||||| Sbjct: 146112 atcttcatcaccaccatcatcttcatcacca 146142 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 255 atcttcatctccatcatcatcttcatca 282 ||||||||| ||||||||||||| |||| Sbjct: 146070 atcttcatcaccatcatcatctttatca 146097 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 255 atcttcatctccatcatcatcttcatca 282 ||||||||| ||||||||||||| |||| Sbjct: 145866 atcttcatcaccatcatcatctttatca 145893
>ref|XM_662055.1| Cryptosporidium hominis TU502 regulator of chromosome condensation (Chro.40154) partial mRNA Length = 2337 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 256 tcttcatctccatcatcatcttcatca 282 ||||||||| ||||||||||||||||| Sbjct: 233 tcttcatcttcatcatcatcttcatca 207 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatca 282 |||||| ||||||||||||||||| Sbjct: 218 tcatcttcatcatcatcttcatca 195
>gb|AE014816.1| Plasmodium falciparum 3D7 chromosome 14 section 1 of 13 of the complete sequence Length = 250029 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 255 atcttcatctccatcatcatcttcatc 281 |||||||||| |||||||||||||||| Sbjct: 102181 atcttcatcttcatcatcatcttcatc 102155
>emb|AL929351.1|PFA929351 Plasmodium falciparum strain 3D7, chromosome 5, segment 1/4 Length = 347050 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 255 atcttcatctccatcatcatcttcatcacca 285 ||||||||| ||||||| ||||||||||||| Sbjct: 212238 atcttcatcaccatcattatcttcatcacca 212268
>emb|AL133503.1|DMBH48C10 Drosophila melanogaster BAC clone BACH48C10 Length = 49587 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 255 atcttcatctccatcatcatcttcatc 281 |||| |||||||||||||||||||||| Sbjct: 47169 atctccatctccatcatcatcttcatc 47143
>emb|CR931732.2| Medicago truncatula chromosome 5 clone mth2-117e11, COMPLETE SEQUENCE Length = 117393 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 256 tcttcatctccatcatcatcttcatca 282 ||||||||| ||||||||||||||||| Sbjct: 41779 tcttcatcttcatcatcatcttcatca 41753
>gb|AC104142.6| Drosophila melanogaster X BAC RP98-13K19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 186753 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 255 atcttcatctccatcatcatcttcatc 281 |||| |||||||||||||||||||||| Sbjct: 128196 atctccatctccatcatcatcttcatc 128170
>gb|AY118942.1| Drosophila melanogaster LD27552 full insert cDNA Length = 2363 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 480 tcagaattggatgactgaatata 502 ||||||||||||||||||||||| Sbjct: 1709 tcagaattggatgactgaatata 1687
>ref|NM_057687.3| Drosophila melanogaster wee CG4488-RA (wee), mRNA Length = 2403 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 480 tcagaattggatgactgaatata 502 ||||||||||||||||||||||| Sbjct: 1762 tcagaattggatgactgaatata 1740
>gb|AC149135.2| Medicago truncatula chromosome 2 BAC clone mth2-31g23, complete sequence Length = 113812 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 265 ccatcatcatcttcatcaccaaa 287 ||||||||||||||||||||||| Sbjct: 59487 ccatcatcatcttcatcaccaaa 59465
>ref|XM_393755.2| PREDICTED: Apis mellifera similar to ENSANGP00000011330 (LOC410274), mRNA Length = 5280 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 271 tcatcttcatcaccaaagccttcaaaa 297 ||||||||||||||| ||||||||||| Sbjct: 416 tcatcttcatcaccagagccttcaaaa 390
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 253 taatcttcatctccatcatcatcttca 279 ||||||||||||||||| ||||||||| Sbjct: 41500029 taatcttcatctccatcttcatcttca 41500055
>gb|AC117075.2| Dictyostelium discoideum chromosome 2 map 5201047-5455781 strain AX4, complete sequence Length = 254733 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 254 aatcttcatctccatcatcatcttcatcaccaaag 288 |||||||||| ||||||||||||||||| ||||| Sbjct: 171724 aatcttcatcatcatcatcatcttcatcatcaaag 171758
>dbj|AP004073.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0614D08 Length = 147548 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 253 taatcttcatctccatcatcatcttca 279 ||||||||||||||||| ||||||||| Sbjct: 56322 taatcttcatctccatcttcatcttca 56348
>dbj|AP003687.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0660F12 Length = 147203 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 253 taatcttcatctccatcatcatcttca 279 ||||||||||||||||| ||||||||| Sbjct: 68228 taatcttcatctccatcttcatcttca 68254
>emb|AL591365.14| Zebrafish DNA sequence from clone BUSM1-150I12 in linkage group 6, complete sequence Length = 84618 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 252 ataatcttcatctccatcatcatcttc 278 ||||||||||||| ||||||||||||| Sbjct: 29598 ataatcttcatcttcatcatcatcttc 29624
>gb|AE003499.5| Drosophila melanogaster chromosome X, section 51 of 74 of the complete sequence Length = 300896 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 255 atcttcatctccatcatcatcttcatc 281 ||||||||||||||| ||||||||||| Sbjct: 280502 atcttcatctccatcttcatcttcatc 280476
>gb|AE003424.2| Drosophila melanogaster chromosome X, section 8 of 74 of the complete sequence Length = 274777 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 255 atcttcatctccatcatcatcttcatc 281 |||| |||||||||||||||||||||| Sbjct: 12333 atctccatctccatcatcatcttcatc 12307
>gb|AC126806.3| Mus musculus BAC clone RP23-158J3 from chromosome 9, complete sequence Length = 202590 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 256 tcttcatctccatcatcatcttcatca 282 |||||||||||||||||||| |||||| Sbjct: 24228 tcttcatctccatcatcatcatcatca 24254
>dbj|AP006356.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT06I08, TM0082b, complete sequence Length = 93398 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 256 tcttcatctccatcatcatcttcatca 282 ||||||||||| ||||||||||||||| Sbjct: 2826 tcttcatctccctcatcatcttcatca 2852
>dbj|AP004529.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT01K12, TM0058a, complete sequence Length = 78249 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 256 tcttcatctccatcatcatcttcatca 282 ||||||||||| ||||||||||||||| Sbjct: 17565 tcttcatctccctcatcatcttcatca 17591
>ref|XM_641741.1| Dictyostelium discoideum putative MADS-box transcription factor (DDB0220491), partial mRNA Length = 3153 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 254 aatcttcatctccatcatcatc 275 |||||||||||||||||||||| Sbjct: 331 aatcttcatctccatcatcatc 310
>ref|XM_640013.1| Dictyostelium discoideum hypothetical protein (DDB0168842), partial mRNA Length = 2796 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 257 cttcatctccatcatcatcttcatca 282 |||||||| ||||||||||||||||| Sbjct: 2552 cttcatcttcatcatcatcttcatca 2577
>gb|BT016506.1| Zea mays clone Contig339 mRNA sequence Length = 1532 Score = 44.1 bits (22), Expect = 0.44 Identities = 32/36 (88%) Strand = Plus / Minus Query: 145 tcctcgncttcttccacctcggngataaccttccta 180 |||||| ||||||||||||| | |||||||||||| Sbjct: 1020 tcctcgtcttcttccacctcagtcataaccttccta 985
>gb|AC136641.3| Mus musculus BAC clone RP23-313G19 from chromosome 7, complete sequence Length = 215208 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatcacc 284 |||||| ||||||||||||||||||| Sbjct: 94619 tcatcttcatcatcatcttcatcacc 94594 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatca 282 ||||| |||||||||||||||||| Sbjct: 94655 tcatcaccatcatcatcttcatca 94632 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatca 282 ||||| |||||||||||||||||| Sbjct: 94631 tcatcaccatcatcatcttcatca 94608
>gb|AC115680.3| Dictyostelium discoideum chromosome 2 map 4915084-5005461 strain AX4, complete sequence Length = 90373 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 257 cttcatctccatcatcatcttcatca 282 |||||||| ||||||||||||||||| Sbjct: 27837 cttcatcttcatcatcatcttcatca 27812
>emb|CR956364.13| Pig DNA sequence from clone PigI-52G3 on chromosome 7, complete sequence Length = 105198 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 259 tcatctccatcatcatcttcatcacc 284 ||||||||||| |||||||||||||| Sbjct: 5467 tcatctccatcgtcatcttcatcacc 5492
>gb|AC124403.3| Mus musculus BAC clone RP24-369I6 from chromosome 16, complete sequence Length = 159138 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 260 catctccatcatcatcttcatcacca 285 |||| ||||||||||||||||||||| Sbjct: 86339 catcaccatcatcatcttcatcacca 86364
>ref|XM_816208.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053510377.200) partial mRNA Length = 873 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 256 tcttcatctccatcatcatcttcatc 281 ||||||||| |||||||||||||||| Sbjct: 278 tcttcatctgcatcatcatcttcatc 253
>emb|BX927349.12| Zebrafish DNA sequence from clone DKEY-84K15 in linkage group 17, complete sequence Length = 159649 Score = 44.1 bits (22), Expect = 0.44 Identities = 31/34 (91%) Strand = Plus / Minus Query: 252 ataatcttcatctccatcatcatcttcatcacca 285 ||||||||||||| |||||| ||| ||||||||| Sbjct: 154518 ataatcttcatcttcatcataatcatcatcacca 154485
>emb|AL596210.20| Human DNA sequence from clone RP11-92O17 on chromosome 1 Contains part of the CAMTA1 gene for calmodulin binding transcription activator 1, complete sequence Length = 107112 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 260 catctccatcatcatcttcatcacca 285 |||||||||||||||| ||||||||| Sbjct: 14335 catctccatcatcatcatcatcacca 14360 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 259 tcatctccatcatcatcttcatcaccaaa 287 ||||| ||||||||||| ||||||||||| Sbjct: 15482 tcatcaccatcatcatcatcatcaccaaa 15510
>emb|AL358944.12| Human DNA sequence from clone RP4-562D20 on chromosome 11 Contains the FSHB gene for follicle stimulating hormone beta polypeptide, ESTs, STSs and GSSs, complete sequence Length = 115865 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 316 tcacccatctcaaagatgagca 337 |||||||||||||||||||||| Sbjct: 80796 tcacccatctcaaagatgagca 80775
>gb|AC107020.4| Homo sapiens 12 BAC RP11-271J4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 127125 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 265 ccatcatcatcttcatcaccaa 286 |||||||||||||||||||||| Sbjct: 75518 ccatcatcatcttcatcaccaa 75539
>emb|AL035684.25|HS1114A1 Human DNA sequence from clone RP5-1114A1 on chromosome 20q13.11-13.2 Contains the 3' part of the ATP9A gene for ATPase, class II, type 9A (KIAA0611), the 5' end of the NFATC2 gene for cytoplasmic calcineurin-dependent (2) nuclear factor of activated T-cells gene and two CpG islands, complete sequence Length = 148845 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 267 atcatcatcttcatcaccaaag 288 |||||||||||||||||||||| Sbjct: 3535 atcatcatcttcatcaccaaag 3514
>emb|AL035494.8|HS635G19 Human DNA sequence from clone RP4-635G19 on chromosome Xq22.1-22.3 Contains a laminin receptor 1 (ribosomal protein SA, 67kDa)(LAMR1) pseudogene, a novel Brain expressed X-linked like family protein (FLJ10097) and a CpG island, complete sequence Length = 69648 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 258 ttcatctccatcatcatcttcatcaccaaa 287 |||||||||| |||||||||||||| |||| Sbjct: 43397 ttcatctccaccatcatcttcatcaacaaa 43368
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome Length = 2799802 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 482 agaattggatgactgaatatat 503 |||||||||||||||||||||| Sbjct: 1119658 agaattggatgactgaatatat 1119679
>gb|AC024220.13| Homo sapiens 3 BAC RP11-33A14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 182932 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 255 atcttcatctccatcatcatcttcat 280 ||||||| |||||||||||||||||| Sbjct: 161158 atcttcaactccatcatcatcttcat 161183
>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome Length = 2878529 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 482 agaattggatgactgaatatat 503 |||||||||||||||||||||| Sbjct: 1165770 agaattggatgactgaatatat 1165791
>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome Length = 2809422 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 482 agaattggatgactgaatatat 503 |||||||||||||||||||||| Sbjct: 1130673 agaattggatgactgaatatat 1130694
>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome Length = 2821361 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 482 agaattggatgactgaatatat 503 |||||||||||||||||||||| Sbjct: 1027010 agaattggatgactgaatatat 1027031
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome Length = 2872769 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 482 agaattggatgactgaatatat 503 |||||||||||||||||||||| Sbjct: 1107135 agaattggatgactgaatatat 1107156
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2 Length = 2820462 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 482 agaattggatgactgaatatat 503 |||||||||||||||||||||| Sbjct: 1090872 agaattggatgactgaatatat 1090893
>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome Length = 2814816 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 482 agaattggatgactgaatatat 503 |||||||||||||||||||||| Sbjct: 1089442 agaattggatgactgaatatat 1089463
>gb|AC105300.24| Mus musculus strain C57BL/6J clone rp23-291e5 map 17, complete sequence Length = 168882 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 260 catctccatcatcatcttcatcacca 285 |||||||||||||||| ||||||||| Sbjct: 133002 catctccatcatcatcatcatcacca 132977
>gb|AY111711.1| Zea mays CL9362_1 mRNA sequence Length = 586 Score = 44.1 bits (22), Expect = 0.44 Identities = 32/36 (88%) Strand = Plus / Plus Query: 145 tcctcgncttcttccacctcggngataaccttccta 180 |||||| ||||||||||||| | |||||||||||| Sbjct: 290 tcctcggcttcttccacctcagtcataaccttccta 325
>gb|U17223.2|DMU17223 Drosophila melanogaster Wee1 kinase (wee) mRNA, complete cds Length = 2383 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 480 tcagaattggatgactgaatat 501 |||||||||||||||||||||| Sbjct: 1726 tcagaattggatgactgaatat 1705
>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome Length = 2902619 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 482 agaattggatgactgaatatat 503 |||||||||||||||||||||| Sbjct: 1131515 agaattggatgactgaatatat 1131536
>emb|AL833803.8| Mouse DNA sequence from clone RP23-244H7 on chromosome 2, complete sequence Length = 226251 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 256 tcttcatctccatcatcatcttcatcacca 285 |||||||| ||||||||||| ||||||||| Sbjct: 23336 tcttcatcaccatcatcatcatcatcacca 23365
>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome Length = 2742531 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 482 agaattggatgactgaatatat 503 |||||||||||||||||||||| Sbjct: 1058307 agaattggatgactgaatatat 1058328
>dbj|AP004916.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT18E24, TM0074, complete sequence Length = 131741 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatcacc 284 |||||||| ||||||||||||||||| Sbjct: 73144 tcatctccttcatcatcttcatcacc 73119
>gb|AC109147.19| Mus musculus chromosome 8, clone RP23-341D16, complete sequence Length = 184600 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 atcttcatctccatcatcatc 275 ||||||||||||||||||||| Sbjct: 71474 atcttcatctccatcatcatc 71494
>ref|XM_639825.1| Dictyostelium discoideum hypothetical protein (DDB0217074), partial mRNA Length = 2523 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 254 aatcttcatctccatcatcatcttcatca 282 ||||||||||| |||||||||| |||||| Sbjct: 1862 aatcttcatcttcatcatcatcatcatca 1890
>ref|XM_639085.1| Dictyostelium discoideum hypothetical protein (DDB0217557), partial mRNA Length = 843 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 259 tcatctccatcatcatcttcatcaccaaa 287 |||||| ||||||||||||||||| |||| Sbjct: 547 tcatcttcatcatcatcttcatcatcaaa 575
>ref|XM_628989.1| Dictyostelium discoideum hypothetical protein (DDB0220125), partial mRNA Length = 3000 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 tcatctccatcatcatcttcatcac 283 |||||| |||||||||||||||||| Sbjct: 238 tcatcttcatcatcatcttcatcac 262
>ref|XM_628946.1| Dictyostelium discoideum BTB/POZ domain-containing protein (DDB0220694), partial mRNA Length = 2421 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 255 atcttcatctccatcatcatcttca 279 |||||||||| |||||||||||||| Sbjct: 2082 atcttcatcttcatcatcatcttca 2106
>ref|XM_507781.1| PREDICTED: Pan troglodytes excision repair cross-complementing rodent repair deficiency, complementation group 6 (LOC450450), mRNA Length = 5923 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 ataatcttcatctccatcatc 272 ||||||||||||||||||||| Sbjct: 1182 ataatcttcatctccatcatc 1162
>gb|AC120529.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0039N21, complete sequence Length = 151732 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 253 taatcttcatctccatcatcatcttcatc 281 |||||||||||| |||| ||||||||||| Sbjct: 42636 taatcttcatcttcatcttcatcttcatc 42608
>gb|AC008097.5| Drosophila melanogaster clone BACR20D06, complete sequence Length = 185670 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 257 cttcatctccatcatcatcttcatcacca 285 ||||| ||||||| ||||||||||||||| Sbjct: 138980 cttcagctccatcttcatcttcatcacca 138952
>ref|XM_458990.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0D13200g) partial mRNA Length = 417 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 256 tcttcatctccatcatcatcttcatcacc 284 ||||||||| |||| |||||||||||||| Sbjct: 161 tcttcatcttcatcttcatcttcatcacc 133
>gb|BC063690.1| Homo sapiens piggyBac transposable element derived 3, mRNA (cDNA clone MGC:70395 IMAGE:4450811), complete cds Length = 2187 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 ataatcttcatctccatcatc 272 ||||||||||||||||||||| Sbjct: 232 ataatcttcatctccatcatc 212
>gb|BC028954.1| Homo sapiens piggyBac transposable element derived 3, mRNA (cDNA clone MGC:30025 IMAGE:4479639), complete cds Length = 2014 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 ataatcttcatctccatcatc 272 ||||||||||||||||||||| Sbjct: 48 ataatcttcatctccatcatc 28
>ref|XM_709586.1| Candida albicans SC5314 putative mitochondrial ATP-dependent protease (CaO19.6973), mRNA Length = 3777 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 254 aatcttcatctccatcatcatcttcatca 282 ||||||||||||||||||| || |||||| Sbjct: 1525 aatcttcatctccatcatcgtcgtcatca 1497
>ref|XM_454794.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E18744g predicted mRNA Length = 1593 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 262 tctccatcatcatcttcatca 282 ||||||||||||||||||||| Sbjct: 1571 tctccatcatcatcttcatca 1551
>ref|NM_170753.1| Homo sapiens piggyBac transposable element derived 3 (PGBD3), mRNA Length = 2198 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 ataatcttcatctccatcatc 272 ||||||||||||||||||||| Sbjct: 231 ataatcttcatctccatcatc 211
>gb|AY810641.1| Schistosoma japonicum SJCHGC06140 protein mRNA, partial cds Length = 1268 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 254 aatcttcatctccatcatcatcttcatca 282 |||||||||| ||||||||||||||||| Sbjct: 708 aatcttcatcgtcatcatcatcttcatca 680
>gb|BC034479.1| Homo sapiens piggyBac transposable element derived 3, mRNA (cDNA clone MGC:26346 IMAGE:4822982), complete cds Length = 3460 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 ataatcttcatctccatcatc 272 ||||||||||||||||||||| Sbjct: 1506 ataatcttcatctccatcatc 1486
>gb|AC110566.17| Mus musculus chromosome 5, clone RP23-300A10, complete sequence Length = 175471 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 atcttcatctccatcatcatc 275 ||||||||||||||||||||| Sbjct: 166577 atcttcatctccatcatcatc 166597
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 253 taatcttcatctccatcatcatcttcatc 281 |||||||||||| |||| ||||||||||| Sbjct: 16899632 taatcttcatcttcatcttcatcttcatc 16899604
>gb|AC142208.3| Homo sapiens chromosome 16 clone XXfos-89260C6, complete sequence Length = 37483 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 265 ccatcatcatcttcatcacca 285 ||||||||||||||||||||| Sbjct: 13359 ccatcatcatcttcatcacca 13379
>ref|XM_448657.1| Candida glabrata CBS138, CAGL0K10076g partial mRNA Length = 3027 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 258 ttcatctccatcatcatcttcatca 282 ||||||||||||||| ||||||||| Sbjct: 588 ttcatctccatcatcgtcttcatca 564
>gb|AC122422.4| Mus musculus BAC clone RP24-169N11 from chromosome 17, complete sequence Length = 181626 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 265 ccatcatcatcttcatcacca 285 ||||||||||||||||||||| Sbjct: 162965 ccatcatcatcttcatcacca 162945
>ref|NG_000839.1| Homo sapiens cystatin locus (CST@) on chromosome 20 Length = 477159 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttca 279 ||||||||||||||||||||| Sbjct: 24971 tcatctccatcatcatcttca 24951
>ref|XM_949622.1| Theileria annulata strain Ankara hypothetical protein (TA17346) partial mRNA Length = 1093 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 257 cttcatctccatcatcatcttcatc 281 ||||||||||||| ||||||||||| Sbjct: 431 cttcatctccatcttcatcttcatc 407
>ref|XM_947614.1| Theileria annulata strain Ankara sub-telomeric protein (TA17125) partial mRNA Length = 1053 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 255 atcttcatctccatcatcatcttca 279 ||||||||||||||||||| ||||| Sbjct: 111 atcttcatctccatcatcaccttca 87
>gb|AC151824.12| Medicago truncatula clone mth2-45n18, complete sequence Length = 99140 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 tcatctccatcatcatcttca 279 ||||||||||||||||||||| Sbjct: 51813 tcatctccatcatcatcttca 51833
>gb|AC158913.4| Mus musculus chromosome 5, clone RP24-268J3, complete sequence Length = 152822 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 atcttcatctccatcatcatc 275 ||||||||||||||||||||| Sbjct: 49471 atcttcatctccatcatcatc 49491
>emb|AL591074.10| Human DNA sequence from clone XXyac-60D10 on chromosome 20 Contains the CST5 gene for cystatin D, the CST2 gene for cystatin SA, the CST1 gene for cystatin SN and the CSTP2 gene for cystatin pseudogene 2, complete sequence Length = 203076 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 tcatctccatcatcatcttca 279 ||||||||||||||||||||| Sbjct: 181741 tcatctccatcatcatcttca 181761
>gb|AE014820.1| Plasmodium falciparum 3D7 chromosome 14 section 5 of 13 of the complete sequence Length = 250029 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 250 atataatcttcatctccatcatcatcttcatca 282 |||||||||||||| |||||||||| |||||| Sbjct: 223229 atataatcttcatcatcatcatcatcatcatca 223197
>emb|AL138760.14| Human DNA sequence from clone RP11-123B3 on chromosome 10 Contains the gene for a novel protein similar to rodent paired-like homeodomain trancription factor Drg11, a novel gene, the 3' end of the ERCC6 gene for excision repair cross-complementing rodent repair deficiency complementation group 6 and a CpG island, complete sequence Length = 173268 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 ataatcttcatctccatcatc 272 ||||||||||||||||||||| Sbjct: 162429 ataatcttcatctccatcatc 162449
>emb|AL732484.13| Mouse DNA sequence from clone RP23-37B7 on chromosome 2, complete sequence Length = 201265 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 atcttcatctccatcatcatc 275 ||||||||||||||||||||| Sbjct: 89596 atcttcatctccatcatcatc 89616
>emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces hansenii Length = 1602771 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 256 tcttcatctccatcatcatcttcatcacc 284 ||||||||| |||| |||||||||||||| Sbjct: 1000735 tcttcatcttcatcttcatcttcatcacc 1000707 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 255 atcttcatctccatcatcatcttcatca 282 |||||||||| |||| |||||||||||| Sbjct: 245965 atcttcatcttcatcgtcatcttcatca 245992
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 262 tctccatcatcatcttcatca 282 ||||||||||||||||||||| Sbjct: 1658964 tctccatcatcatcttcatca 1658944
>emb|CR380957.1| Candida glabrata strain CBS138 chromosome K complete sequence Length = 1302002 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 258 ttcatctccatcatcatcttcatca 282 ||||||||||||||| ||||||||| Sbjct: 985885 ttcatctccatcatcgtcttcatca 985909
>emb|AL035477.6|PFMAL4P4 Plasmodium falciparum MAL4P4 Length = 272698 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttca 279 ||||||||||||||||||||| Sbjct: 103130 tcatctccatcatcatcttca 103110
>emb|AJ293320.1|RRI293320 Rickettsia rickettsii dapD gene (partial), pbpC gene, rp196 gene, rp197 gene, rp198 gene, adx1 gene, hscA gene (partial), forfD1 gene, ORFD2, Length = 13902 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 267 atcatcatcttcatcaccaaagccttcaa 295 ||||||||||| |||| |||||||||||| Sbjct: 8440 atcatcatctttatcatcaaagccttcaa 8412
>gb|AC119041.6| Homo sapiens X BAC RP11-585K14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 100000 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 256 tcttcatctccatcatcatcttcatcacc 284 |||||||| ||||||| |||||||||||| Sbjct: 26301 tcttcatcaccatcataatcttcatcacc 26273
>emb|CR405690.6| Zebrafish DNA sequence from clone CH211-208M13 in linkage group 22, complete sequence Length = 195552 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 265 ccatcatcatcttcatcacca 285 ||||||||||||||||||||| Sbjct: 73012 ccatcatcatcttcatcacca 73032
>dbj|AK074682.1| Homo sapiens cDNA FLJ90201 fis, clone MAMMA1001623 Length = 2116 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 ataatcttcatctccatcatc 272 ||||||||||||||||||||| Sbjct: 178 ataatcttcatctccatcatc 158
>gb|AF329945.1|AF329945 Takifugu rubripes SUN-like 1 (SUNL1), chromosome 17 open reading frame 27 (C17orf27), transcription factor SOX9 (SOX9), and somatostatin receptor 2 (SSTR2) genes, complete cds; and ubiquitin-specific-protease-3-like protein (USP3L) gene, partial cds Length = 194498 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 254 aatcttcatctccatcatcatcttcatca 282 |||| ||||||||||||||||| |||||| Sbjct: 118610 aatcctcatctccatcatcatcatcatca 118582
>emb|BX842696.13| Zebrafish DNA sequence from clone DKEY-165P1 in linkage group 13, complete sequence Length = 216185 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 tcatctccatcatcatcttca 279 ||||||||||||||||||||| Sbjct: 103079 tcatctccatcatcatcttca 103099
>gb|AC159278.3| Mus musculus BAC clone RP23-361M12 from chromosome 1, complete sequence Length = 180181 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 255 atcttcatctccatcatcatcttcatcac 283 |||||||||| |||| ||||||||||||| Sbjct: 159985 atcttcatcttcatcttcatcttcatcac 160013
>emb|BX897656.9| Zebrafish DNA sequence from clone CH211-271K12, complete sequence Length = 141840 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 265 ccatcatcatcttcatcacca 285 ||||||||||||||||||||| Sbjct: 56524 ccatcatcatcttcatcacca 56504
>dbj|AB179012.1| Macaca fascicularis testis cDNA clone: QtsA-11460, similar to human piggyBac transposable element derived 3 (PGBD3), mRNA, RefSeq: NM_170753.1 Length = 2511 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 ataatcttcatctccatcatc 272 ||||||||||||||||||||| Sbjct: 564 ataatcttcatctccatcatc 544
>gb|AC156021.2| Mus musculus BAC clone RP23-256A5 from chromosome 5, complete sequence Length = 217987 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 265 ccatcatcatcttcatcacca 285 ||||||||||||||||||||| Sbjct: 31625 ccatcatcatcttcatcacca 31605
>gb|AC021842.7|AC021842 Homo sapiens chromosome 8, clone RP11-472N16, complete sequence Length = 190044 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 258 ttcatctccatcatcatcttcatca 282 |||||||||||||||||| |||||| Sbjct: 74200 ttcatctccatcatcatcatcatca 74176
>ref|NM_063324.2| Caenorhabditis elegans QUAhog (hedgehog related) family member (qua-1) (qua-1) mRNA, complete cds Length = 3837 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 265 ccatcatcatcttcatcacca 285 ||||||||||||||||||||| Sbjct: 1388 ccatcatcatcttcatcacca 1368
>gb|AC017047.4|AC017047 Homo sapiens BAC clone RP11-323F10 from X, complete sequence Length = 180322 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 256 tcttcatctccatcatcatcttcatcacc 284 |||||||| ||||||| |||||||||||| Sbjct: 6992 tcttcatcaccatcataatcttcatcacc 7020
>gb|AC140838.3| Homo sapiens chromosome 16 clone XXfos-84069G6, complete sequence Length = 40546 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 265 ccatcatcatcttcatcacca 285 ||||||||||||||||||||| Sbjct: 23605 ccatcatcatcttcatcacca 23625
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 253 taatcttcatctccatcatcatcttcatc 281 |||||||||||| |||| ||||||||||| Sbjct: 16893205 taatcttcatcttcatcttcatcttcatc 16893177
>gb|AC140540.3| Homo sapiens chromosome 16 clone XXfos-88730H2, complete sequence Length = 38342 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 265 ccatcatcatcttcatcacca 285 ||||||||||||||||||||| Sbjct: 22323 ccatcatcatcttcatcacca 22343
>gb|AC144411.2| Homo sapiens BAC clone GS1-146C24 from 7, complete sequence Length = 178059 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 255 atcttcatctccatcatcatcttcatcac 283 ||||||||| |||||| |||||||||||| Sbjct: 44351 atcttcatcaccatcaccatcttcatcac 44379
>gb|AF310888.1|AF310888 Dictyostelium discoideum RacC (racC) gene, complete cds, alternatively spliced; and unknown gene Length = 3971 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 tcatctccatcatcatcttcatcac 283 |||||| |||||||||||||||||| Sbjct: 3105 tcatcttcatcatcatcttcatcac 3129
>gb|AC154177.2| Mus musculus BAC clone RP23-465J20 from chromosome 17, complete sequence Length = 206481 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 265 ccatcatcatcttcatcacca 285 ||||||||||||||||||||| Sbjct: 45494 ccatcatcatcttcatcacca 45474
>gb|AC009117.8| Homo sapiens chromosome 16 clone RP11-481E4, complete sequence Length = 172868 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tcaaagatgagcaatcaggca 345 ||||||||||||||||||||| Sbjct: 89952 tcaaagatgagcaatcaggca 89972
>gb|AC125612.7| Homo sapiens 12 BAC RP11-117N2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 135754 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 278 catcaccaaagccttcaaaat 298 ||||||||||||||||||||| Sbjct: 57490 catcaccaaagccttcaaaat 57470
>gb|AC117176.2| Dictyostelium discoideum chromosome 2 map 5018074-5200947 strain AX4, complete sequence Length = 182871 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 254 aatcttcatctccatcatcatcttcatca 282 ||||||||||| |||||||||| |||||| Sbjct: 165918 aatcttcatcttcatcatcatcatcatca 165890
>gb|AC116957.2| Dictyostelium discoideum chromosome 2 map 1685067-2090751 strain AX4, complete sequence Length = 405682 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatcaccaaa 287 |||||| ||||||||||||||||| |||| Sbjct: 100972 tcatcttcatcatcatcttcatcatcaaa 100944
>gb|AC061992.11| Homo sapiens chromosome 17, clone RP11-806H10, complete sequence Length = 100190 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 253 taatcttcatctccatcatcatcttcatcacca 285 ||||| ||||| ||||||||||| ||||||||| Sbjct: 49259 taatcatcatcaccatcatcatcatcatcacca 49227
>gb|AY204752.1| Homo sapiens excision repair cross-complementing rodent repair deficiency, complementation group 6 (ERCC6) gene, complete cds Length = 82019 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 ataatcttcatctccatcatc 272 ||||||||||||||||||||| Sbjct: 15939 ataatcttcatctccatcatc 15919
>gb|AC012178.5| Homo sapiens chromosome 16 clone RP11-243A14, complete sequence Length = 155951 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 261 atctccatcatcatcttcatcacca 285 ||||||||||||||| ||||||||| Sbjct: 53686 atctccatcatcatcatcatcacca 53662 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 ctccatcatcatcttcatca 282 |||||||||||||||||||| Sbjct: 54011 ctccatcatcatcttcatca 53992
>emb|AL928554.24| Mouse DNA sequence from clone RP23-131H7 on chromosome 1, complete sequence Length = 195568 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 255 atcttcatctccatcatcatcttcatcac 283 |||||||||| |||| ||||||||||||| Sbjct: 33968 atcttcatcttcatcttcatcttcatcac 33940
>gb|AC116868.9| Mus musculus chromosome 1, clone RP24-414I2, complete sequence Length = 161154 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 255 atcttcatctccatcatcatcttcatcac 283 |||||||||| |||| ||||||||||||| Sbjct: 16009 atcttcatcttcatcttcatcttcatcac 16037
>emb|AL844480.29| Mouse DNA sequence from clone RP23-190B10 on chromosome 4, complete sequence Length = 175199 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 261 atctccatcatcatcttcatcacca 285 |||||||||||||||||| |||||| Sbjct: 50525 atctccatcatcatcttcttcacca 50501
>ref|NM_000124.1| Homo sapiens excision repair cross-complementing rodent repair deficiency, complementation group 6 (ERCC6), mRNA Length = 4714 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 ataatcttcatctccatcatc 272 ||||||||||||||||||||| Sbjct: 1459 ataatcttcatctccatcatc 1439
>gb|AE003793.3| Drosophila melanogaster chromosome 2R, section 57 of 73 of the complete sequence Length = 271902 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 257 cttcatctccatcatcatcttcatcacca 285 ||||| ||||||| ||||||||||||||| Sbjct: 81473 cttcagctccatcttcatcttcatcacca 81445
>gb|CP000223.1| Drosophila melanogaster genomic scaffold 211000022280790 Length = 626829 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 48 aggcaaaattatctaaagtacaaca 72 ||||||||||||||| ||||||||| Sbjct: 172757 aggcaaaattatctacagtacaaca 172733
>gb|AC137516.3| Mus musculus BAC clone RP23-259P18 from 1, complete sequence Length = 162037 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 tcatctccatcatcatcttca 279 ||||||||||||||||||||| Sbjct: 139601 tcatctccatcatcatcttca 139621
>emb|Z66500.1|CET05C12 Caenorhabditis elegans Cosmid T05C12, complete sequence Length = 33780 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 265 ccatcatcatcttcatcacca 285 ||||||||||||||||||||| Sbjct: 32841 ccatcatcatcttcatcacca 32821
>dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, complete sequence Length = 949626 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 253 taatcttcatctccatcatcatcttcatc 281 |||||||||||| |||| ||||||||||| Sbjct: 836210 taatcttcatcttcatcttcatcttcatc 836238
>gb|AC167022.4| Mus musculus BAC clone RP23-183A4 from chromosome 8, complete sequence Length = 224462 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 255 atcttcatctccatcatcatc 275 ||||||||||||||||||||| Sbjct: 44747 atcttcatctccatcatcatc 44727
>gb|L04791.1|HUMERCC6A Human excision repair protein ERCC6 mRNA, complete cds Length = 4714 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 ataatcttcatctccatcatc 272 ||||||||||||||||||||| Sbjct: 1459 ataatcttcatctccatcatc 1439
>ref|NM_115191.2| Arabidopsis thaliana DNA binding / transcription factor AT3G53310 mRNA, complete cds Length = 1174 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 255 atcttcatctccatcatcatcttcatca 282 |||||||||| |||| |||||||||||| Sbjct: 494 atcttcatcttcatcttcatcttcatca 467
>ref|NM_105560.2| Arabidopsis thaliana unknown protein AT1G68870 mRNA, complete cds Length = 654 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 catcatcatcttcatcacca 285 |||||||||||||||||||| Sbjct: 220 catcatcatcttcatcacca 201
>ref|NM_111440.2| Arabidopsis thaliana DNA binding / protein binding / ubiquitin-protein ligase/ zinc ion binding AT3G05670 mRNA, complete cds Length = 3090 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 254 aatcttcatctccatcatcatcttcatc 281 |||||||||| ||||||||||| ||||| Sbjct: 998 aatcttcatcgccatcatcatcctcatc 971
>ref|NM_180044.1| Arabidopsis thaliana RNA binding / structural constituent of ribosome AT2G42710 mRNA, complete cds Length = 1525 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 255 atcttcatctccatcatcatcttcatca 282 |||||||||| |||| |||||||||||| Sbjct: 149 atcttcatcttcatcttcatcttcatca 176
>gb|AC154102.15| Mus musculus chromosome 8, clone RP24-186O14, complete sequence Length = 171510 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 262 tctccatcatcatcttcatcacca 285 |||||||||||||| ||||||||| Sbjct: 169389 tctccatcatcatcatcatcacca 169412
>ref|XM_632486.1| Dictyostelium discoideum hypothetical protein (DDB0218853), partial mRNA Length = 2757 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatca 282 |||||| ||||||||||||||||| Sbjct: 1442 tcatcttcatcatcatcttcatca 1419
>ref|XM_631755.1| Dictyostelium discoideum hypothetical protein (DDB0187836), partial mRNA Length = 2808 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 255 atcttcatctccatcatcatcttcatca 282 |||||||||| |||| |||||||||||| Sbjct: 1674 atcttcatcttcatcttcatcttcatca 1647
>ref|XM_642140.1| Dictyostelium discoideum hypothetical protein (DDB0202116), partial mRNA Length = 3681 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 255 atcttcatctccatcatcatcttcatca 282 |||||||||| ||||| ||||||||||| Sbjct: 3381 atcttcatcttcatcaccatcttcatca 3408
>ref|XM_641752.1| Dictyostelium discoideum hypothetical protein (DDB0202279), partial mRNA Length = 5319 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatca 282 |||||| ||||||||||||||||| Sbjct: 5132 tcatcttcatcatcatcttcatca 5109
>ref|XM_641340.1| Dictyostelium discoideum hypothetical protein (DDB0190700), partial mRNA Length = 2367 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatca 282 |||||| ||||||||||||||||| Sbjct: 314 tcatcttcatcatcatcttcatca 291
>ref|XM_638914.1| Dictyostelium discoideum hypothetical protein (DDB0167813), partial mRNA Length = 2697 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 catcatcatcttcatcacca 285 |||||||||||||||||||| Sbjct: 83 catcatcatcttcatcacca 102
>ref|XM_638408.1| Dictyostelium discoideum hypothetical protein (DDB0217693), partial mRNA Length = 7551 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 255 atcttcatctccatcatcatcttcatca 282 |||||| ||| ||||||||||||||||| Sbjct: 5613 atcttcgtcttcatcatcatcttcatca 5586
>ref|XM_638285.1| Dictyostelium discoideum hypothetical protein (DDB0203538), partial mRNA Length = 2100 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 tcatctccatcatcatcttcatca 282 ||||||| |||||||||||||||| Sbjct: 250 tcatctctatcatcatcttcatca 273
>ref|XM_637446.1| Dictyostelium discoideum hypothetical protein (DDB0217992), partial mRNA Length = 3984 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 255 atcttcatctccatcatcatcttcatca 282 |||||||||| |||| |||||||||||| Sbjct: 3540 atcttcatcttcatcttcatcttcatca 3513
>ref|XM_637009.1| Dictyostelium discoideum hypothetical protein (DDB0204400), partial mRNA Length = 2454 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 255 atcttcatctccatcatcatcttc 278 |||||||||| ||||||||||||| Sbjct: 990 atcttcatcttcatcatcatcttc 1013
>ref|XM_636657.1| Dictyostelium discoideum hypothetical protein (DDB0205674), partial mRNA Length = 2298 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 254 aatcttcatctccatcatcatcttcatc 281 |||| |||||| |||||||||||||||| Sbjct: 532 aatcatcatcttcatcatcatcttcatc 505
>ref|XM_636639.1| Dictyostelium discoideum hypothetical protein (DDB0205654), partial mRNA Length = 756 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 tcatctccatcatcatcttcatca 282 |||||| ||||||||||||||||| Sbjct: 271 tcatcttcatcatcatcttcatca 294
>ref|XM_635968.1| Dictyostelium discoideum hypothetical protein (DDB0206053), partial mRNA Length = 804 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 255 atcttcatctccatcatcatcttcatca 282 |||||||||| |||| |||||||||||| Sbjct: 588 atcttcatcttcatcttcatcttcatca 615
>ref|XM_635258.1| Dictyostelium discoideum putative RIO1 family protein kinase (DDB0216429), partial mRNA Length = 1569 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatca 282 |||||| ||||||||||||||||| Sbjct: 1016 tcatcttcatcatcatcttcatca 993
>ref|XM_633682.1| Dictyostelium discoideum transcription factor E2F/dimerisation partner (TDP) family protein (DDB0216397), partial mRNA Length = 2592 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 255 atcttcatctccatcatcatcttcatca 282 ||||||||| ||||||||||||||||| Sbjct: 2343 atcttcatcatcatcatcatcttcatca 2370
>ref|XM_631061.1| Dictyostelium discoideum hypothetical protein (DDB0188474), partial mRNA Length = 3807 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatca 282 |||||| ||||||||||||||||| Sbjct: 2468 tcatcttcatcatcatcttcatca 2445
>ref|XM_631051.1| Dictyostelium discoideum hypothetical protein (DDB0188501), partial mRNA Length = 615 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 tcatctccatcatcatcttcatca 282 |||||| ||||||||||||||||| Sbjct: 460 tcatcttcatcatcatcttcatca 483
>ref|XM_630952.1| Dictyostelium discoideum hypothetical protein (DDB0188508), partial mRNA Length = 1626 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 255 atcttcatctccatcatcatcttc 278 ||||||||| |||||||||||||| Sbjct: 1455 atcttcatcaccatcatcatcttc 1432
>ref|XM_630948.1| Dictyostelium discoideum hypothetical protein (DDB0219496), partial mRNA Length = 2601 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 tcatctccatcatcatcttcatca 282 |||||| ||||||||||||||||| Sbjct: 619 tcatcttcatcatcatcttcatca 642
>ref|XM_630906.1| Dictyostelium discoideum hypothetical protein (DDB0188660), partial mRNA Length = 4653 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 272 catcttcatcaccaaagccttcaa 295 |||||||||||||||| ||||||| Sbjct: 1355 catcttcatcaccaaaaccttcaa 1378
>ref|XM_630508.1| Dictyostelium discoideum alpha kinase (DDB0216199), partial mRNA Length = 2343 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 255 atcttcatctccatcatcatcttcatca 282 ||||||||| ||||||||||||||||| Sbjct: 1266 atcttcatcatcatcatcatcttcatca 1293
>ref|XM_629352.1| Dictyostelium discoideum hypothetical protein (DDB0191807), partial mRNA Length = 1245 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 tcatctccatcatcatcttcatca 282 |||||| ||||||||||||||||| Sbjct: 1165 tcatcttcatcatcatcttcatca 1188
>ref|XM_629129.1| Dictyostelium discoideum hypothetical protein (DDB0219861), partial mRNA Length = 3765 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatca 282 |||||| ||||||||||||||||| Sbjct: 455 tcatcttcatcatcatcttcatca 432
>ref|NM_207202.2| Mus musculus DNA segment, Chr X, Immunex 50, expressed (DXImx50e), mRNA Length = 3641 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 tgcctgctacccctgtcctc 149 |||||||||||||||||||| Sbjct: 1208 tgcctgctacccctgtcctc 1227
>gb|AE014833.1| Plasmodium falciparum 3D7 chromosome 10 section 5 of 7 of the complete sequence Length = 252394 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 tcatctccatcatcatcttcatca 282 |||||| ||||||||||||||||| Sbjct: 127783 tcatcttcatcatcatcttcatca 127806 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatca 282 |||||| ||||||||||||||||| Sbjct: 28222 tcatcttcatcatcatcttcatca 28199
>ref|NM_001033383.1| Mus musculus RIKEN cDNA 6430526N21 gene (6430526N21Rik), mRNA Length = 3959 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 tcatctccatcatcatcttcatca 282 |||||| ||||||||||||||||| Sbjct: 588 tcatcttcatcatcatcttcatca 611
>gb|AC112965.10| Mus musculus chromosome 1, clone RP24-95N17, complete sequence Length = 158782 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatcaccaa 286 ||||| ||||||||||| |||||||||| Sbjct: 150658 tcatcaccatcatcatcatcatcaccaa 150631
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence Length = 1178688 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 254 aatcttcatctccatcatcatcttcatc 281 |||| |||||||||| |||||||||||| Sbjct: 875822 aatcatcatctccatgatcatcttcatc 875849
>gb|AE001396.1| Plasmodium falciparum 3D7 chromosome 2 section 33 of 73 of the complete sequence Length = 14613 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatca 282 |||||| ||||||||||||||||| Sbjct: 4831 tcatcttcatcatcatcttcatca 4808
>gb|AF462245.1| Hemibagrus nemurus clone PCTB12 microsatellite sequence Length = 250 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatca 282 ||||||||||||||||| |||||| Sbjct: 32 tcatctccatcatcatcatcatca 9
>gb|AC163679.3| Mus musculus BAC clone RP24-104E24 from chromosome 16, complete sequence Length = 193718 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 gcaaaattatctaaagtacaacat 73 ||||||||||||| |||||||||| Sbjct: 81266 gcaaaattatctagagtacaacat 81289
>gb|AC102999.7| Rattus norvegicus 7 BAC CH230-33J22 (Children's Hospital Oakland Research Institute) complete sequence Length = 209654 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 tcatctccatcatcatcttcatca 282 ||||||||||||||||| |||||| Sbjct: 27071 tcatctccatcatcatcatcatca 27094
>gb|AY693114.1| Saccharomyces cerevisiae clone FLH006991.01X YPR163C gene, complete cds Length = 1311 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 tcttcatctccatcatcatcttca 279 ||||||||| |||||||||||||| Sbjct: 1184 tcttcatcttcatcatcatcttca 1161
>gb|AC009842.9| Drosophila melanogaster clone BACR04C12, complete sequence Length = 163183 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 48 aggcaaaattatctaaagtacaacatca 75 ||||||||||| ||||| |||||||||| Sbjct: 29929 aggcaaaattaactaaattacaacatca 29956
>ref|XM_363309.1| Magnaporthe grisea 70-15 hypothetical protein (MG01235.4) partial mRNA Length = 1224 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 tcttcatctccatcatcatc 275 |||||||||||||||||||| Sbjct: 1010 tcttcatctccatcatcatc 991
>ref|XM_458593.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0D03608g) partial mRNA Length = 3771 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 255 atcttcatctccatcatcatcttcatca 282 |||||||||| |||| |||||||||||| Sbjct: 1458 atcttcatcttcatcgtcatcttcatca 1431
>ref|XM_460195.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0E21714g) partial mRNA Length = 3039 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 255 atcttcatctccatcatcatcttc 278 |||||||||| ||||||||||||| Sbjct: 2652 atcttcatcttcatcatcatcttc 2629
>ref|XM_960503.1| Neurospora crassa OR74A hypothetical protein (NCU02914.1) partial mRNA Length = 2571 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatca 282 |||||| ||||||||||||||||| Sbjct: 1715 tcatcttcatcatcatcttcatca 1692
>gb|BT015000.1| Arabidopsis thaliana At1g68870 mRNA, complete cds Length = 444 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 catcatcatcttcatcacca 285 |||||||||||||||||||| Sbjct: 184 catcatcatcttcatcacca 165
>gb|AC111052.10| Mus musculus chromosome 17, clone RP24-401D24, complete sequence Length = 148512 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 tcatctccatcatcatcttcatca 282 ||||||||||| |||||||||||| Sbjct: 55562 tcatctccatcctcatcttcatca 55585
>ref|NM_001040465.1| Gallus gallus Dicer1, Dcr-1 homolog (Drosophila) (DICER1), mRNA Length = 6152 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 tcttcatctccatcatcatcttca 279 ||||||||| |||||||||||||| Sbjct: 1289 tcttcatcttcatcatcatcttca 1266
>gb|BC016768.1| Homo sapiens nucleophosmin (nucleolar phosphoprotein B23, numatrin), mRNA (cDNA clone MGC:22724 IMAGE:4081364), complete cds Length = 1331 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatca 282 ||||| |||||||||||||||||| Sbjct: 638 tcatcaccatcatcatcttcatca 615
>gb|BC072409.1| Homo sapiens KIAA2010, mRNA (cDNA clone MGC:87841 IMAGE:6142109), complete cds Length = 3428 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 255 atcttcatctccatcatcatcttcatca 282 ||||||||| ||||||||||||||||| Sbjct: 2615 atcttcatcctcatcatcatcttcatca 2588
>ref|XM_330101.1| Neurospora crassa OR74A hypothetical protein (NCU02914.1) partial mRNA Length = 2571 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatca 282 |||||| ||||||||||||||||| Sbjct: 1715 tcatcttcatcatcatcttcatca 1692
>ref|NM_032560.4| Homo sapiens KIAA2010 (KIAA2010), mRNA Length = 3894 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 255 atcttcatctccatcatcatcttcatca 282 ||||||||| ||||||||||||||||| Sbjct: 2698 atcttcatcctcatcatcatcttcatca 2671
>gb|BT014768.1| Arabidopsis thaliana At1g68870 gene, complete cds Length = 632 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 catcatcatcttcatcacca 285 |||||||||||||||||||| Sbjct: 201 catcatcatcttcatcacca 182
>ref|XM_711459.1| Candida albicans SC5314 hypothetical protein (CaO19_1244), mRNA Length = 2829 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 254 aatcttcatctccatcatcatcttcatcacca 285 |||| ||||||| |||||||||||||||||| Sbjct: 2623 aatcatcatctcgttcatcatcttcatcacca 2592
>ref|XM_711404.1| Candida albicans SC5314 hypothetical protein (CaO19_8829), mRNA Length = 2829 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 254 aatcttcatctccatcatcatcttcatcacca 285 |||| ||||||| |||||||||||||||||| Sbjct: 2623 aatcatcatctcgttcatcatcttcatcacca 2592
>ref|NM_010473.1| Mus musculus histidine rich calcium binding protein (Hrc), mRNA Length = 2270 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatca 282 ||||||||||||||||| |||||| Sbjct: 1083 tcatctccatcatcatcatcatca 1060
>ref|XM_705047.1| Candida albicans SC5314 hypothetical protein (CaO19.8532), mRNA Length = 330 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 tcatctccatcatcatcttcatca 282 |||||| ||||||||||||||||| Sbjct: 185 tcatcttcatcatcatcttcatca 208
>ref|XM_705044.1| Candida albicans SC5314 hypothetical protein (CaO19.917), mRNA Length = 330 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 tcatctccatcatcatcttcatca 282 |||||| ||||||||||||||||| Sbjct: 185 tcatcttcatcatcatcttcatca 208
>ref|XM_452008.1| Kluyveromyces lactis NRRL Y-1140, KLLA0B10780g predicted mRNA Length = 1677 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 aagtacaacatcatcgacac 82 |||||||||||||||||||| Sbjct: 994 aagtacaacatcatcgacac 1013
>gb|AY329362.1| Gallus gallus shaker subfamily potassium channel KCNA10 mRNA, complete cds Length = 1873 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 tcatctccatcatcatcttc 278 |||||||||||||||||||| Sbjct: 781 tcatctccatcatcatcttc 800
>gb|AC116922.2| Dictyostelium discoideum chromosome 2 map 6061442-6097630 strain AX4, complete sequence Length = 36188 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 255 atcttcatctccatcatcatcttcatca 282 |||||||||| |||| |||||||||||| Sbjct: 20785 atcttcatcttcatcttcatcttcatca 20758
>gb|AC005296.2| Homo sapiens X BAC GS1-214D18 (Genome Systems Human BAC Library) complete sequence Length = 191503 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 catcatcatcttcatcacca 285 |||||||||||||||||||| Sbjct: 170639 catcatcatcttcatcacca 170658
>gb|AC148216.1| Homo sapiens BAC RP11-143E20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 59902 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 catcatcatcttcatcacca 285 |||||||||||||||||||| Sbjct: 18861 catcatcatcttcatcacca 18842
>ref|XM_984665.1| PREDICTED: Mus musculus similar to KIAA1183 protein (LOC434128), mRNA Length = 2397 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 255 atcttcatctccatcatcatcttcatca 282 |||||||||| | ||||||||||||||| Sbjct: 1386 atcttcatcttcgtcatcatcttcatca 1359
>ref|XM_976824.1| PREDICTED: Mus musculus RIKEN cDNA 6430526N21 gene (6430526N21Rik), mRNA Length = 2879 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 tcatctccatcatcatcttcatca 282 |||||| ||||||||||||||||| Sbjct: 585 tcatcttcatcatcatcttcatca 608
>ref|XM_914713.2| PREDICTED: Mus musculus similar to KIAA1183 protein (LOC434128), mRNA Length = 2397 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 255 atcttcatctccatcatcatcttcatca 282 |||||||||| | ||||||||||||||| Sbjct: 1386 atcttcatcttcgtcatcatcttcatca 1359
>ref|XM_485870.4| PREDICTED: Mus musculus similar to KIAA1183 protein (LOC434128), mRNA Length = 2397 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 255 atcttcatctccatcatcatcttcatca 282 |||||||||| | ||||||||||||||| Sbjct: 1386 atcttcatcttcgtcatcatcttcatca 1359
>emb|AL021531.1|FR151J19 Fugu rubripes cosmid 151J19 covering the WT1, reticulocalbin and PAX6 genes Length = 45565 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatca 282 ||||| |||||||||||||||||| Sbjct: 37290 tcatcaccatcatcatcttcatca 37267
>ref|XM_532733.2| PREDICTED: Canis familiaris similar to enhancer of zeste 2 isoform b, transcript variant 1 (LOC475511), mRNA Length = 2530 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatca 282 ||||||||||||||||| |||||| Sbjct: 578 tcatctccatcatcatcatcatca 555
>ref|XM_850842.1| PREDICTED: Canis familiaris similar to enhancer of zeste 2 isoform b, transcript variant 8 (LOC475511), mRNA Length = 2488 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatca 282 ||||||||||||||||| |||||| Sbjct: 551 tcatctccatcatcatcatcatca 528
>ref|XM_850798.1| PREDICTED: Canis familiaris similar to enhancer of zeste 2 isoform b, transcript variant 7 (LOC475511), mRNA Length = 2395 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatca 282 ||||||||||||||||| |||||| Sbjct: 458 tcatctccatcatcatcatcatca 435
>ref|XM_850761.1| PREDICTED: Canis familiaris similar to enhancer of zeste 2 isoform b, transcript variant 6 (LOC475511), mRNA Length = 2401 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatca 282 ||||||||||||||||| |||||| Sbjct: 578 tcatctccatcatcatcatcatca 555
>ref|XM_850710.1| PREDICTED: Canis familiaris similar to enhancer of zeste 2 isoform b, transcript variant 5 (LOC475511), mRNA Length = 2542 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatca 282 ||||||||||||||||| |||||| Sbjct: 575 tcatctccatcatcatcatcatca 552
>ref|XM_850672.1| PREDICTED: Canis familiaris similar to enhancer of zeste 2 isoform b, transcript variant 4 (LOC475511), mRNA Length = 2542 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatca 282 ||||||||||||||||| |||||| Sbjct: 575 tcatctccatcatcatcatcatca 552
>ref|XM_961127.1| Plasmodium falciparum 3D7 protein kinase (PFF1145c) partial mRNA Length = 7215 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatca 282 |||||| ||||||||||||||||| Sbjct: 3452 tcatcttcatcatcatcttcatca 3429
>gb|BC018617.1| Homo sapiens KIAA2010, mRNA (cDNA clone IMAGE:4853847), with apparent retained intron Length = 1063 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 255 atcttcatctccatcatcatcttcatca 282 ||||||||| ||||||||||||||||| Sbjct: 378 atcttcatcctcatcatcatcttcatca 351
>gb|BC038932.1| Homo sapiens KIAA2010, mRNA (cDNA clone MGC:45056 IMAGE:5579749), complete cds Length = 3253 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 255 atcttcatctccatcatcatcttcatca 282 ||||||||| ||||||||||||||||| Sbjct: 2570 atcttcatcctcatcatcatcttcatca 2543
>gb|BC028088.1| Homo sapiens KIAA2010, mRNA (cDNA clone IMAGE:3462769), complete cds Length = 1324 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 255 atcttcatctccatcatcatcttcatca 282 ||||||||| ||||||||||||||||| Sbjct: 112 atcttcatcctcatcatcatcttcatca 85
>ref|XM_573013.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNI03220) partial mRNA Length = 904 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 254 aatcttcatctccatcatcatcttcatc 281 |||| |||||||||| |||||||||||| Sbjct: 541 aatcatcatctccatgatcatcttcatc 514
>gb|AY453840.1| Homo sapiens atherin mRNA, complete cds Length = 1617 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 255 atcttcatctccatcatcatcttc 278 |||||||||| ||||||||||||| Sbjct: 1017 atcttcatcttcatcatcatcttc 994
>gb|AC123877.5| Mus musculus BAC clone RP23-297J18 from chromosome 5, complete sequence Length = 183152 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 catcatcatcttcatcacca 285 |||||||||||||||||||| Sbjct: 64412 catcatcatcttcatcacca 64393
>gb|AC125542.4| Mus musculus BAC clone RP23-321C24 from chromosome 5, complete sequence Length = 194326 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 catcatcatcttcatcacca 285 |||||||||||||||||||| Sbjct: 104175 catcatcatcttcatcacca 104194
>gb|AC011620.8|ATAC011620 Arabidopsis thaliana chromosome III BAC F18C1 genomic sequence, complete sequence Length = 100887 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 254 aatcttcatctccatcatcatcttcatc 281 |||||||||| ||||||||||| ||||| Sbjct: 52549 aatcttcatcgccatcatcatcctcatc 52576
>emb|Z75714.1|CEZC434 Caenorhabditis elegans Cosmid ZC434, complete sequence Length = 31531 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 tcttcatctccatcatcatc 275 |||||||||||||||||||| Sbjct: 25739 tcttcatctccatcatcatc 25758
>gb|AC066608.6| Homo sapiens chromosome 3 clone RP11-785A7 map 3p, complete sequence Length = 172811 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 catcatcatcttcatcacca 285 |||||||||||||||||||| Sbjct: 163419 catcatcatcttcatcacca 163438
>ref|XM_803497.1| Trypanosoma cruzi strain CL Brener trans-sialidase (Tc00.1047053510411.40) partial mRNA Length = 1726 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatcaccaa 286 ||||| ||||||||||| |||||||||| Sbjct: 1284 tcatccccatcatcatcatcatcaccaa 1257
>gb|AC123061.4| Mus musculus BAC clone RP23-216H22 from 14, complete sequence Length = 193093 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatca 282 |||||| ||||||||||||||||| Sbjct: 36764 tcatcttcatcatcatcttcatca 36741
>gb|AC121783.2| Mus musculus BAC clone RP23-370I9 from 18, complete sequence Length = 184366 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 catcatcatcttcatcacca 285 |||||||||||||||||||| Sbjct: 101200 catcatcatcttcatcacca 101219
>ref|XM_652494.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (1.t00028.part_1) partial mRNA Length = 625 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatca 282 |||||| ||||||||||||||||| Sbjct: 344 tcatcttcatcatcatcttcatca 321 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatca 282 |||||| ||||||||||||||||| Sbjct: 332 tcatcttcatcatcatcttcatca 309 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatca 282 |||||| ||||||||||||||||| Sbjct: 320 tcatcttcatcatcatcttcatca 297 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatca 282 |||||| ||||||||||||||||| Sbjct: 308 tcatcttcatcatcatcttcatca 285 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatca 282 |||||| ||||||||||||||||| Sbjct: 296 tcatcttcatcatcatcttcatca 273
>ref|XM_722910.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY00959) partial mRNA Length = 15222 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 255 atcttcatctccatcatcatcttcatca 282 ||||||||| ||||||||||||||||| Sbjct: 8772 atcttcatcgtcatcatcatcttcatca 8745
>emb|CR699754.2|CNS0G2VQ Tetraodon nigroviridis full-length cDNA Length = 978 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 ctccatcatcatcttcatca 282 |||||||||||||||||||| Sbjct: 853 ctccatcatcatcttcatca 872
>ref|XM_724964.1| Plasmodium yoelii yoelii str. 17XNL translational activator (PY02189) partial mRNA Length = 6504 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 tcttcatctccatcatcatcttca 279 |||||||||||||| ||||||||| Sbjct: 3032 tcttcatctccatcttcatcttca 3009
>ref|XM_961005.1| Plasmodium falciparum 3D7 trancription factor (PFF0535c) partial mRNA Length = 3843 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatca 282 ||||||||||||||||| |||||| Sbjct: 329 tcatctccatcatcatcatcatca 306
>ref|XM_961135.1| Plasmodium falciparum 3D7 hypothetical protein (PFF1185w) partial mRNA Length = 8160 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 255 atcttcatctccatcatcatcttcatca 282 |||||| ||| ||||||||||||||||| Sbjct: 2634 atcttcttcttcatcatcatcttcatca 2607
>ref|XM_946728.1| Theileria annulata strain Ankara hypothetical protein (TA15705) partial mRNA Length = 1008 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 255 atcttcatctccatcatcatcttcatca 282 |||| ||||||||||| ||||||||||| Sbjct: 99 atctccatctccatcaccatcttcatca 72
>gb|AC019155.4| Homo sapiens BAC clone RP11-3B12 from 7, complete sequence Length = 176130 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 255 atcttcatctccatcatcatcttcatca 282 ||||||||| ||||||||||||||||| Sbjct: 86210 atcttcatcatcatcatcatcttcatca 86237
>emb|CR678048.2|CNS0FM53 Tetraodon nigroviridis full-length cDNA Length = 1145 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 255 atcttcatctccatcatcatcttcatca 282 ||||||||| ||||||||||| |||||| Sbjct: 184 atcttcatcaccatcatcatcatcatca 157
>gb|AC004941.2| Homo sapiens PAC clone RP5-979P20 from 7, complete sequence Length = 122759 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatca 282 ||||| |||||||||||||||||| Sbjct: 36120 tcatcaccatcatcatcttcatca 36097
>gb|AC165955.3| Mus musculus BAC clone RP23-458A8 from chromosome 7, complete sequence Length = 203253 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 255 atcttcatctccatcatcatcttcatca 282 |||||||||| | ||||||||||||||| Sbjct: 12997 atcttcatcttcgtcatcatcttcatca 13024
>emb|CR638922.2|CNS0ERYO Tetraodon nigroviridis full-length cDNA Length = 1200 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatcaccaa 286 ||||| ||||||||||| |||||||||| Sbjct: 217 tcatcaccatcatcatcatcatcaccaa 190
>gb|AC135800.24| Medicago truncatula clone mth2-14g8, complete sequence Length = 125467 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 252 ataatcttcatctccatcatcatc 275 ||||||||||||||||||| |||| Sbjct: 93643 ataatcttcatctccatcaacatc 93666
>emb|CR383667.11| Zebrafish DNA sequence from clone CH211-229P19 in linkage group 10, complete sequence Length = 121560 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 tcatctccatcatcatcttcatca 282 |||||| ||||||||||||||||| Sbjct: 75111 tcatcttcatcatcatcttcatca 75134
>emb|BX004991.18| Zebrafish DNA sequence from clone CH211-222F23 in linkage group 9, complete sequence Length = 202138 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tcatctccatcatcatcttcatca 282 |||||| ||||||||||||||||| Sbjct: 54377 tcatcttcatcatcatcttcatca 54354
>emb|BX537131.17| Zebrafish DNA sequence from clone CH211-266K2 in linkage group 14, complete sequence Length = 140171 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 catcatcatcttcatcacca 285 |||||||||||||||||||| Sbjct: 74059 catcatcatcttcatcacca 74040 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 255 atcttcatctccatcatcatcttcatca 282 ||||||||| ||||||||||| |||||| Sbjct: 74052 atcttcatcaccatcatcatcatcatca 74025
>ref|NM_008666.1| Mus musculus myelin transcription factor 1-like (Myt1l), mRNA Length = 4532 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 255 atcttcatctccatcatcatcttcatca 282 ||||||||| ||||||||||||||||| Sbjct: 1169 atcttcatcatcatcatcatcttcatca 1142
>emb|Z97355.1|HSU230G7 Human DNA sequence from clone LL0XNC01-230G7 on chromosome X, complete sequence Length = 30946 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 258 ttcatctccatcatcatcttcatcacca 285 |||||||||||||||||| ||| ||||| Sbjct: 12296 ttcatctccatcatcatcatcaccacca 12269
>emb|Z97196.1|HS448E20 Human DNA sequence from clone RP3-448E20 on chromosome Xq25-26.3, complete sequence Length = 88882 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 catcatcatcttcatcacca 285 |||||||||||||||||||| Sbjct: 68633 catcatcatcttcatcacca 68614
>ref|XM_794839.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC576846 (LOC576846), partial mRNA Length = 856 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 tctccatcatcatcttcatcacca 285 ||||||||| |||||||||||||| Sbjct: 590 tctccatcaccatcttcatcacca 567
>emb|AL512640.9| Human DNA sequence from clone RP11-219K22 on chromosome 10, complete sequence Length = 96322 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 tcatctccatcatcatcttcatca 282 ||||||||||||||||| |||||| Sbjct: 40193 tcatctccatcatcatcatcatca 40216 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,470,051 Number of Sequences: 3902068 Number of extensions: 4470051 Number of successful extensions: 114449 Number of sequences better than 10.0: 435 Number of HSP's better than 10.0 without gapping: 435 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 112461 Number of HSP's gapped (non-prelim): 1984 length of query: 504 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 482 effective length of database: 17,147,199,772 effective search space: 8264950290104 effective search space used: 8264950290104 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)