ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd23l21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197734.1| Oryza sativa (japonica cultivar-group) unknown ... 149 1e-32
2dbj|AK066334.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 1e-32
3gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 gen... 68 4e-08
4dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 68 4e-08
5gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 68 4e-08
6dbj|AK059709.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 9e-06
7emb|CR376762.12| Zebrafish DNA sequence from clone CH211-81G2 in... 44 0.52
8gb|AC019068.8| Homo sapiens BAC clone RP11-201F21 from 2, comple... 44 0.52
9ref|NM_117839.3| Arabidopsis thaliana unknown protein AT4G17350 ... 42 2.0
10gb|BT015941.1| Arabidopsis thaliana At4g17350 mRNA, complete cds 42 2.0
11gb|AC102290.7| Mus musculus chromosome 3, clone RP24-359J7, comp... 42 2.0
12gb|BT025551.1| Arabidopsis thaliana At4g17350 mRNA, complete cds 42 2.0
13gb|AC160652.2| Pan troglodytes BAC clone CH251-490H15 from chrom... 42 2.0
14emb|CT010515.8| M.truncatula DNA sequence from clone MTH2-146B21... 42 2.0
15gb|AC148347.13| Medicago truncatula clone mth2-26g24, complete s... 42 2.0
16gb|AC148291.22| Medicago truncatula clone mth2-14n3, complete se... 42 2.0
17ref|XM_503230.1| Yarrowia lipolytica CLIB122, YALI0D24409g predi... 42 2.0
18emb|AL360236.26| Human DNA sequence from clone RP11-380M3 on chr... 42 2.0
19gb|AC158307.5| Mus musculus chromosome 3, clone RP23-148J20, com... 42 2.0
20gb|AC148525.14| Medicago truncatula clone mth2-24i13, complete s... 42 2.0
21gb|AC161823.4| Pan troglodytes BAC clone CH251-142M23 from chrom... 42 2.0
22emb|BX827691.1|CNS0A319 Arabidopsis thaliana Full-length cDNA Co... 42 2.0
23emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 42 2.0
24gb|AC152951.2| Mus musculus 10 BAC RP23-451J19 (Roswell Park Can... 42 2.0
25ref|NM_123754.3| Arabidopsis thaliana unknown protein AT5G43870 ... 40 8.1
26ref|XM_457072.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 8.1
27gb|BT013996.1| Lycopersicon esculentum clone 133043F, mRNA sequence 40 8.1
28gb|AC108410.9| Mus musculus chromosome 7, clone RP23-480A17, com... 40 8.1
29gb|AF026214.1| Caenorhabditis elegans cosmid F52H2, complete seq... 40 8.1
30emb|CR762472.6| Zebrafish DNA sequence from clone DKEY-75G19 in ... 40 8.1
31emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS... 40 8.1
32gb|AC154350.3| Mus musculus BAC clone RP23-225B15 from chromosom... 40 8.1
33gb|AC103813.2| Homo sapiens chromosome 8, clone CTD-2253H3, comp... 40 8.1
34gb|AC026798.5| Homo sapiens chromosome 5 clone CTD-2312P21, comp... 40 8.1
35gb|AC022973.5| Homo sapiens, clone RP11-473O4, complete sequence 40 8.1
36gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g... 40 8.1
37gb|AC135355.3| Mus musculus BAC clone RP24-495F22 from chromosom... 40 8.1
38emb|BX830231.1|CNS0A1CU Arabidopsis thaliana Full-length cDNA Co... 40 8.1
39emb|BX832072.1|CNS0A0ZF Arabidopsis thaliana Full-length cDNA Co... 40 8.1
40emb|BX830992.1|CNS0A0UG Arabidopsis thaliana Full-length cDNA Co... 40 8.1
41emb|BX830639.1|CNS0A182 Arabidopsis thaliana Full-length cDNA Co... 40 8.1
42emb|BX833855.1|CNS09YWS Arabidopsis thaliana Full-length cDNA Co... 40 8.1
43emb|BX830496.1|CNS09YUU Arabidopsis thaliana Full-length cDNA Co... 40 8.1
44emb|AL353668.20| Human DNA sequence from clone RP11-184B18 on ch... 40 8.1
45dbj|AP005715.3| Homo sapiens genomic DNA, chromosome 8q24, clone... 40 8.1
46emb|BX119983.4| Zebrafish DNA sequence from clone CH211-198G9 in... 40 8.1
47emb|AL772138.15| Mouse DNA sequence from clone RP23-213F17 on ch... 40 8.1
48gb|AC144778.3| Mus musculus BAC clone RP23-278A22 from 6, comple... 40 8.1
49emb|AL662925.12| Mouse DNA sequence from clone RP23-226M12 on ch... 40 8.1 
>ref|NM_197734.1| Oryza sativa (japonica cultivar-group) unknown protein
           (OSJNBa0042H09.6), mRNA
          Length = 1171

 Score =  149 bits (75), Expect = 1e-32
 Identities = 222/269 (82%), Gaps = 4/269 (1%)
 Strand = Plus / Minus

                                                                       
Query: 305 cctccaatgtgtttgctcttcagcttcaatatgac-tgtgacctcttgttgatgtagatt 363
           ||||| |||||||| ||||||| |||||||||||| |||||||||||||||||||| || 
Sbjct: 918 cctcctatgtgtttactcttcaacttcaatatgacctgtgacctcttgttgatgtatata 859

                                                                       
Query: 364 gaaacccgtctcttgtgtaaatgcccttttcttgtgcgttttagcagcttgccttccttg 423
           || || ||| ||||||||||||  ||||||||||||||||| || | ||  || ||||||
Sbjct: 858 gatactcgtgtcttgtgtaaatctccttttcttgtgcgtttcagtaactccccctccttg 799

                                                                       
Query: 424 caccagatatcaggactccatgacaaaggggccttctcataaggaatgacactggcattg 483
           |||||||| |||||||||||||   |  |  |||||||||| ||||  ||||| ||||||
Sbjct: 798 caccagatgtcaggactccatg---agtgacccttctcatacggaagaacactcgcattg 742

                                                                       
Query: 484 cttctcgcctcgcgctggaccctcttcttcagcgtcgcagctcctctcaaagctgtcgct 543
           ||||||  ||| ||||| || |||| |||||  || || |||||||  | ||| || |||
Sbjct: 741 cttctcatctctcgctgcactctctgcttcattgttgcggctcctcgaagagcagtagct 682

                                        
Query: 544 gcggcggctgtgagcgtcatcagatcacc 572
           || || |||||||| ||||||||||||||
Sbjct: 681 gctgctgctgtgagtgtcatcagatcacc 653



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 88/106 (83%)
 Strand = Plus / Minus

                                                                        
Query: 107  acctgctggagcagattttgcacaccatgaacccagctctgtttactggtgctgctctca 166
            |||||| | |||||||| | |||| |||  ||||| ||||||||||| |||||| |||||
Sbjct: 1119 acctgccgaagcagattcttcacatcatcgacccacctctgtttacttgtgctgttctca 1060

                                                          
Query: 167  cacttgaactcaatcaggccttgtgctgtactcaagccaaagcagc 212
            ||||  ||||| | ||| |||||||| || |||| |||||||||||
Sbjct: 1059 cactcaaactctaccagaccttgtgccgtgctcaggccaaagcagc 1014
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>dbj|AK066334.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063K07, full
           insert sequence
          Length = 1390

 Score =  149 bits (75), Expect = 1e-32
 Identities = 222/269 (82%), Gaps = 4/269 (1%)
 Strand = Plus / Minus

                                                                       
Query: 305 cctccaatgtgtttgctcttcagcttcaatatgac-tgtgacctcttgttgatgtagatt 363
           ||||| |||||||| ||||||| |||||||||||| |||||||||||||||||||| || 
Sbjct: 973 cctcctatgtgtttactcttcaacttcaatatgacctgtgacctcttgttgatgtatata 914

                                                                       
Query: 364 gaaacccgtctcttgtgtaaatgcccttttcttgtgcgttttagcagcttgccttccttg 423
           || || ||| ||||||||||||  ||||||||||||||||| || | ||  || ||||||
Sbjct: 913 gatactcgtgtcttgtgtaaatctccttttcttgtgcgtttcagtaactccccctccttg 854

                                                                       
Query: 424 caccagatatcaggactccatgacaaaggggccttctcataaggaatgacactggcattg 483
           |||||||| |||||||||||||   |  |  |||||||||| ||||  ||||| ||||||
Sbjct: 853 caccagatgtcaggactccatg---agtgacccttctcatacggaagaacactcgcattg 797

                                                                       
Query: 484 cttctcgcctcgcgctggaccctcttcttcagcgtcgcagctcctctcaaagctgtcgct 543
           ||||||  ||| ||||| || |||| |||||  || || |||||||  | ||| || |||
Sbjct: 796 cttctcatctctcgctgcactctctgcttcattgttgcggctcctcgaagagcagtagct 737

                                        
Query: 544 gcggcggctgtgagcgtcatcagatcacc 572
           || || |||||||| ||||||||||||||
Sbjct: 736 gctgctgctgtgagtgtcatcagatcacc 708



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 88/106 (83%)
 Strand = Plus / Minus

                                                                        
Query: 107  acctgctggagcagattttgcacaccatgaacccagctctgtttactggtgctgctctca 166
            |||||| | |||||||| | |||| |||  ||||| ||||||||||| |||||| |||||
Sbjct: 1174 acctgccgaagcagattcttcacatcatcgacccacctctgtttacttgtgctgttctca 1115

                                                          
Query: 167  cacttgaactcaatcaggccttgtgctgtactcaagccaaagcagc 212
            ||||  ||||| | ||| |||||||| || |||| |||||||||||
Sbjct: 1114 cactcaaactctaccagaccttgtgccgtgctcaggccaaagcagc 1069
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>gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 genomic sequence, complete
             sequence
          Length = 144191

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 88/106 (83%)
 Strand = Plus / Plus

                                                                         
Query: 107   acctgctggagcagattttgcacaccatgaacccagctctgtttactggtgctgctctca 166
             |||||| | |||||||| | |||| |||  ||||| ||||||||||| |||||| |||||
Sbjct: 72901 acctgccgaagcagattcttcacatcatcgacccacctctgtttacttgtgctgttctca 72960

                                                           
Query: 167   cacttgaactcaatcaggccttgtgctgtactcaagccaaagcagc 212
             ||||  ||||| | ||| |||||||| || |||| |||||||||||
Sbjct: 72961 cactcaaactctaccagaccttgtgccgtgctcaggccaaagcagc 73006



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                        
Query: 388   ccttttcttgtgcgttttagcagcttgccttccttgcaccagatatcaggactccatga 446
             ||||||||||||||||| || | ||  || |||||||||||||| ||||||||||||||
Sbjct: 73488 ccttttcttgtgcgtttcagtaactccccctccttgcaccagatgtcaggactccatga 73546



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                            
Query: 339   ctgtgacctcttgttgatgtagattgaaacccgtctcttgtgtaaat 385
             ||||||||||||||||||||| || || || ||| ||||||||||||
Sbjct: 73327 ctgtgacctcttgttgatgtatatagatactcgtgtcttgtgtaaat 73373



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 305   cctccaatgtgtttgctcttcagcttcaatatgac 339
             ||||| |||||||| ||||||| ||||||||||||
Sbjct: 73203 cctcctatgtgtttactcttcaacttcaatatgac 73237



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 541   gctgcggcggctgtgagcgtcatcagatcacc 572
             ||||| || |||||||| ||||||||||||||
Sbjct: 73723 gctgctgctgctgtgagtgtcatcagatcacc 73754
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 88/106 (83%)
 Strand = Plus / Minus

                                                                            
Query: 107      acctgctggagcagattttgcacaccatgaacccagctctgtttactggtgctgctctca 166
                |||||| | |||||||| | |||| |||  ||||| ||||||||||| |||||| |||||
Sbjct: 21537156 acctgccgaagcagattcttcacatcatcgacccacctctgtttacttgtgctgttctca 21537097

                                                              
Query: 167      cacttgaactcaatcaggccttgtgctgtactcaagccaaagcagc 212
                ||||  ||||| | ||| |||||||| || |||| |||||||||||
Sbjct: 21537096 cactcaaactctaccagaccttgtgccgtgctcaggccaaagcagc 21537051



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                           
Query: 388      ccttttcttgtgcgttttagcagcttgccttccttgcaccagatatcaggactccatga 446
                ||||||||||||||||| || | ||  || |||||||||||||| ||||||||||||||
Sbjct: 21536569 ccttttcttgtgcgtttcagtaactccccctccttgcaccagatgtcaggactccatga 21536511



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                               
Query: 339      ctgtgacctcttgttgatgtagattgaaacccgtctcttgtgtaaat 385
                ||||||||||||||||||||| || || || ||| ||||||||||||
Sbjct: 21536730 ctgtgacctcttgttgatgtatatagatactcgtgtcttgtgtaaat 21536684



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 305      cctccaatgtgtttgctcttcagcttcaatatgac 339
                ||||| |||||||| ||||||| ||||||||||||
Sbjct: 21536854 cctcctatgtgtttactcttcaacttcaatatgac 21536820



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 541      gctgcggcggctgtgagcgtcatcagatcacc 572
                ||||| || |||||||| ||||||||||||||
Sbjct: 21536334 gctgctgctgctgtgagtgtcatcagatcacc 21536303
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 88/106 (83%)
 Strand = Plus / Minus

                                                                            
Query: 107      acctgctggagcagattttgcacaccatgaacccagctctgtttactggtgctgctctca 166
                |||||| | |||||||| | |||| |||  ||||| ||||||||||| |||||| |||||
Sbjct: 21548819 acctgccgaagcagattcttcacatcatcgacccacctctgtttacttgtgctgttctca 21548760

                                                              
Query: 167      cacttgaactcaatcaggccttgtgctgtactcaagccaaagcagc 212
                ||||  ||||| | ||| |||||||| || |||| |||||||||||
Sbjct: 21548759 cactcaaactctaccagaccttgtgccgtgctcaggccaaagcagc 21548714



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                           
Query: 388      ccttttcttgtgcgttttagcagcttgccttccttgcaccagatatcaggactccatga 446
                ||||||||||||||||| || | ||  || |||||||||||||| ||||||||||||||
Sbjct: 21548232 ccttttcttgtgcgtttcagtaactccccctccttgcaccagatgtcaggactccatga 21548174



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                               
Query: 339      ctgtgacctcttgttgatgtagattgaaacccgtctcttgtgtaaat 385
                ||||||||||||||||||||| || || || ||| ||||||||||||
Sbjct: 21548393 ctgtgacctcttgttgatgtatatagatactcgtgtcttgtgtaaat 21548347



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 305      cctccaatgtgtttgctcttcagcttcaatatgac 339
                ||||| |||||||| ||||||| ||||||||||||
Sbjct: 21548517 cctcctatgtgtttactcttcaacttcaatatgac 21548483



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 541      gctgcggcggctgtgagcgtcatcagatcacc 572
                ||||| || |||||||| ||||||||||||||
Sbjct: 21547997 gctgctgctgctgtgagtgtcatcagatcacc 21547966
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>dbj|AK059709.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-E11, full
           insert sequence
          Length = 329

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 87/106 (82%)
 Strand = Plus / Minus

                                                                       
Query: 107 acctgctggagcagattttgcacaccatgaacccagctctgtttactggtgctgctctca 166
           |||||| | |||||||| | |||| |||  ||||| ||||||||||| |||||| |||||
Sbjct: 113 acctgccgaagcagattcttcacatcatcgacccacctctgtttacttgtgctgttctca 54

                                                         
Query: 167 cacttgaactcaatcaggccttgtgctgtactcaagccaaagcagc 212
           ||||  ||||  | ||| |||||||| || |||| |||||||||||
Sbjct: 53  cactcaaactttaccagaccttgtgccgtgctcaggccaaagcagc 8
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>emb|CR376762.12| Zebrafish DNA sequence from clone CH211-81G2 in linkage group 8,
            complete sequence
          Length = 183602

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 398  tgcgttttagcagcttgccttc 419
            ||||||||||||||||||||||
Sbjct: 5075 tgcgttttagcagcttgccttc 5054
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>gb|AC019068.8| Homo sapiens BAC clone RP11-201F21 from 2, complete sequence
          Length = 131359

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 63    gttttaatgtttctagcctgtgccct 88
             ||||||||||||||| ||||||||||
Sbjct: 71687 gttttaatgtttctatcctgtgccct 71662
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>ref|NM_117839.3| Arabidopsis thaliana unknown protein AT4G17350 mRNA, complete cds
          Length = 2136

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                             
Query: 524  ctcctctcaaagctgtcgctgcggcggctgtgagcgtcatcagatcacc 572
            ||||||||||||| || || || |||||||| || ||||| ||||||||
Sbjct: 1156 ctcctctcaaagcagttgcagcagcggctgttagagtcatgagatcacc 1108
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>gb|BT015941.1| Arabidopsis thaliana At4g17350 mRNA, complete cds
          Length = 1551

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                            
Query: 524 ctcctctcaaagctgtcgctgcggcggctgtgagcgtcatcagatcacc 572
           ||||||||||||| || || || |||||||| || ||||| ||||||||
Sbjct: 851 ctcctctcaaagcagttgcagcagcggctgttagagtcatgagatcacc 803
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>gb|AC102290.7| Mus musculus chromosome 3, clone RP24-359J7, complete sequence
          Length = 175819

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 271    ataaactacacttttattgtttttt 295
              ||||||||||||||| |||||||||
Sbjct: 106408 ataaactacactttttttgtttttt 106384
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>gb|BT025551.1| Arabidopsis thaliana At4g17350 mRNA, complete cds
          Length = 1218

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                            
Query: 524 ctcctctcaaagctgtcgctgcggcggctgtgagcgtcatcagatcacc 572
           ||||||||||||| || || || |||||||| || ||||| ||||||||
Sbjct: 706 ctcctctcaaagcagttgcagcagcggctgttagagtcatgagatcacc 658
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>gb|AC160652.2| Pan troglodytes BAC clone CH251-490H15 from chromosome 6, complete
              sequence
          Length = 169342

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 153    tggtgctgctctcacacttga 173
              |||||||||||||||||||||
Sbjct: 146639 tggtgctgctctcacacttga 146659
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>emb|CT010515.8| M.truncatula DNA sequence from clone MTH2-146B21 on chromosome 3,
              complete sequence
          Length = 130617

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 22     aaaattttgattcatgtacta 42
              |||||||||||||||||||||
Sbjct: 127092 aaaattttgattcatgtacta 127112
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>gb|AC148347.13| Medicago truncatula clone mth2-26g24, complete sequence
          Length = 114712

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 22     aaaattttgattcatgtacta 42
              |||||||||||||||||||||
Sbjct: 105682 aaaattttgattcatgtacta 105662
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>gb|AC148291.22| Medicago truncatula clone mth2-14n3, complete sequence
          Length = 138853

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 22  aaaattttgattcatgtacta 42
           |||||||||||||||||||||
Sbjct: 554 aaaattttgattcatgtacta 534
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>ref|XM_503230.1| Yarrowia lipolytica CLIB122, YALI0D24409g predicted mRNA
          Length = 1773

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 96  cggctacatcaacctgctgga 116
           |||||||||||||||||||||
Sbjct: 699 cggctacatcaacctgctgga 719
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>emb|AL360236.26| Human DNA sequence from clone RP11-380M3 on chromosome 6 Contains a novel
              pseudogene, part of the KCNQ5 gene for potassium
              voltage-gated channel KQT-like subfamily member 5, and a
              phosphoglycerate mutase 1 (brain) (PGAM1) pseudogene,
              complete sequence
          Length = 154998

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 153    tggtgctgctctcacacttga 173
              |||||||||||||||||||||
Sbjct: 137487 tggtgctgctctcacacttga 137467
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>gb|AC158307.5| Mus musculus chromosome 3, clone RP23-148J20, complete sequence
          Length = 204891

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 271    ataaactacacttttattgtttttt 295
              ||||||||||||||| |||||||||
Sbjct: 110298 ataaactacactttttttgtttttt 110322
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>gb|AC148525.14| Medicago truncatula clone mth2-24i13, complete sequence
          Length = 94953

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 22    aaaattttgattcatgtacta 42
             |||||||||||||||||||||
Sbjct: 61043 aaaattttgattcatgtacta 61063
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>gb|AC161823.4| Pan troglodytes BAC clone CH251-142M23 from chromosome unknown, complete
              sequence
          Length = 163179

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 153    tggtgctgctctcacacttga 173
              |||||||||||||||||||||
Sbjct: 120172 tggtgctgctctcacacttga 120192
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>emb|BX827691.1|CNS0A319 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH10ZF04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1643

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                            
Query: 524 ctcctctcaaagctgtcgctgcggcggctgtgagcgtcatcagatcacc 572
           ||||||||||||| || || || |||||||| || ||||| ||||||||
Sbjct: 943 ctcctctcaaagcagttgcagcagcggctgttagagtcatgagatcacc 895
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>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 96      cggctacatcaacctgctgga 116
               |||||||||||||||||||||
Sbjct: 3237875 cggctacatcaacctgctgga 3237895
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>gb|AC152951.2| Mus musculus 10 BAC RP23-451J19 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 183431

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 277   tacacttttattgttttttga 297
             |||||||||||||||||||||
Sbjct: 31299 tacacttttattgttttttga 31319
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>ref|NM_123754.3| Arabidopsis thaliana unknown protein AT5G43870 mRNA, complete cds
          Length = 1589

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 520 gcagctcctctcaaagctgt 539
           ||||||||||||||||||||
Sbjct: 889 gcagctcctctcaaagctgt 870
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>ref|XM_457072.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0B02453g)
           partial mRNA
          Length = 186

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 233 cctggctcagtccactctgggagc 256
           ||||||||||||||| ||||||||
Sbjct: 106 cctggctcagtccacactgggagc 129
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>gb|BT013996.1| Lycopersicon esculentum clone 133043F, mRNA sequence
          Length = 1134

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 401 gttttagcagcttgccttcc 420
           ||||||||||||||||||||
Sbjct: 625 gttttagcagcttgccttcc 606
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>gb|AC108410.9| Mus musculus chromosome 7, clone RP23-480A17, complete sequence
          Length = 184780

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 272   taaactacacttttattgtttttt 295
             ||||||||| ||||||||||||||
Sbjct: 79683 taaactacaattttattgtttttt 79706
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>gb|AF026214.1| Caenorhabditis elegans cosmid F52H2, complete sequence
          Length = 43908

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 280   acttttattgttttttgaca 299
             ||||||||||||||||||||
Sbjct: 27485 acttttattgttttttgaca 27504
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>emb|CR762472.6| Zebrafish DNA sequence from clone DKEY-75G19 in linkage group 1, complete
              sequence
          Length = 176472

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 321    tcttcagcttcaatatgact 340
              ||||||||||||||||||||
Sbjct: 142604 tcttcagcttcaatatgact 142585
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>emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS767 of Debaryomyces
              hansenii
          Length = 1349926

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 233    cctggctcagtccactctgggagc 256
              ||||||||||||||| ||||||||
Sbjct: 190476 cctggctcagtccacactgggagc 190499
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>gb|AC154350.3| Mus musculus BAC clone RP23-225B15 from chromosome 13, complete sequence
          Length = 213847

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     cagttgagttttaatgtttc 75
              ||||||||||||||||||||
Sbjct: 108208 cagttgagttttaatgtttc 108227
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>gb|AC103813.2| Homo sapiens chromosome 8, clone CTD-2253H3, complete sequence
          Length = 84129

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 207   agcagcttgtctctggtaaa 226
             ||||||||||||||||||||
Sbjct: 59385 agcagcttgtctctggtaaa 59366
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>gb|AC026798.5| Homo sapiens chromosome 5 clone CTD-2312P21, complete sequence
          Length = 121309

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    cagttgagttttaatgtttc 75
             ||||||||||||||||||||
Sbjct: 74843 cagttgagttttaatgtttc 74824
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>gb|AC022973.5| Homo sapiens, clone RP11-473O4, complete sequence
          Length = 194367

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 207   agcagcttgtctctggtaaa 226
             ||||||||||||||||||||
Sbjct: 54395 agcagcttgtctctggtaaa 54376
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>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 314     tgtttgctcttcagcttcaa 333
               ||||||||||||||||||||
Sbjct: 4878076 tgtttgctcttcagcttcaa 4878095
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>gb|AC135355.3| Mus musculus BAC clone RP24-495F22 from chromosome 6, complete sequence
          Length = 171057

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 232   ccctggctcagtccactctgggag 255
             |||||| |||||||||||||||||
Sbjct: 80745 ccctggatcagtccactctgggag 80768
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>emb|BX830231.1|CNS0A1CU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB67ZF09 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1551

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 520 gcagctcctctcaaagctgt 539
           ||||||||||||||||||||
Sbjct: 884 gcagctcctctcaaagctgt 865
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>emb|BX832072.1|CNS0A0ZF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH4ZB05 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1551

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 520 gcagctcctctcaaagctgt 539
           ||||||||||||||||||||
Sbjct: 869 gcagctcctctcaaagctgt 850
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>emb|BX830992.1|CNS0A0UG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS46ZF04 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1589

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 520 gcagctcctctcaaagctgt 539
           ||||||||||||||||||||
Sbjct: 889 gcagctcctctcaaagctgt 870
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>emb|BX830639.1|CNS0A182 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB9ZA11 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1545

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 520 gcagctcctctcaaagctgt 539
           ||||||||||||||||||||
Sbjct: 886 gcagctcctctcaaagctgt 867
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>emb|BX833855.1|CNS09YWS Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL7ZF12 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1544

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 520 gcagctcctctcaaagctgt 539
           ||||||||||||||||||||
Sbjct: 882 gcagctcctctcaaagctgt 863
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>emb|BX830496.1|CNS09YUU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB86ZA03 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1536

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 520 gcagctcctctcaaagctgt 539
           ||||||||||||||||||||
Sbjct: 882 gcagctcctctcaaagctgt 863
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>emb|AL353668.20| Human DNA sequence from clone RP11-184B18 on chromosome 8, complete
             sequence
          Length = 177277

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 207   agcagcttgtctctggtaaa 226
             ||||||||||||||||||||
Sbjct: 74842 agcagcttgtctctggtaaa 74861
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>dbj|AP005715.3| Homo sapiens genomic DNA, chromosome 8q24, clone: KB1181D6, complete
             sequence
          Length = 134425

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 207   agcagcttgtctctggtaaa 226
             ||||||||||||||||||||
Sbjct: 12832 agcagcttgtctctggtaaa 12851
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>emb|BX119983.4| Zebrafish DNA sequence from clone CH211-198G9 in linkage group 1,
             complete sequence
          Length = 172227

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 321   tcttcagcttcaatatgact 340
             ||||||||||||||||||||
Sbjct: 62439 tcttcagcttcaatatgact 62458
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>emb|AL772138.15| Mouse DNA sequence from clone RP23-213F17 on chromosome 4, complete
              sequence
          Length = 229213

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 206    aagcagcttgtctctggtaa 225
              ||||||||||||||||||||
Sbjct: 211929 aagcagcttgtctctggtaa 211910
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>gb|AC144778.3| Mus musculus BAC clone RP23-278A22 from 6, complete sequence
          Length = 187115

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 232    ccctggctcagtccactctgggag 255
              |||||| |||||||||||||||||
Sbjct: 183504 ccctggatcagtccactctgggag 183527
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>emb|AL662925.12| Mouse DNA sequence from clone RP23-226M12 on chromosome X, complete
             sequence
          Length = 199774

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 402   ttttagcagcttgccttccttgca 425
             |||||| |||||||||||||||||
Sbjct: 20515 ttttaggagcttgccttccttgca 20492


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,847,294
Number of Sequences: 3902068
Number of extensions: 5847294
Number of successful extensions: 129459
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 129282
Number of HSP's gapped (non-prelim): 175
length of query: 592
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 569
effective length of database: 17,143,297,704
effective search space: 9754536393576
effective search space used: 9754536393576
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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