Clone Name | rbasd23l19 |
---|---|
Clone Library Name | barley_pub |
>emb|CR752642.5| Zebrafish DNA sequence from clone DKEY-165D23 in linkage group 5, complete sequence Length = 16751 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Minus Query: 71 gcaaatgaatcagccctcgca 91 ||||||||||||||||||||| Sbjct: 249 gcaaatgaatcagccctcgca 229
>emb|BX936403.9| Zebrafish DNA sequence from clone CH211-281A24 in linkage group 5, complete sequence Length = 142908 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Minus Query: 71 gcaaatgaatcagccctcgca 91 ||||||||||||||||||||| Sbjct: 141157 gcaaatgaatcagccctcgca 141137
>gb|DP000013.1| Otolemur garnettii target 1 genomic scaffold Length = 1743090 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 tttatacatattaactattt 153 |||||||||||||||||||| Sbjct: 322619 tttatacatattaactattt 322600
>gb|AC145509.2| Gasterosteus aculeatus clone CH213-128O17, complete sequence Length = 213989 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 gcattgctgcacacattgca 118 |||||||||||||||||||| Sbjct: 211860 gcattgctgcacacattgca 211841
>emb|AL590867.10| Human DNA sequence from clone RP11-475C16 on chromosome 6 Contains a ribosomal protein L27a (60S ribosomal protein L27a) (RPL27A) pseudogene and a novel gene, complete sequence Length = 63621 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 acttctatttatacatatta 146 |||||||||||||||||||| Sbjct: 14745 acttctatttatacatatta 14726
>emb|BX927071.12| Zebrafish DNA sequence from clone DKEY-286O23 in linkage group 18, complete sequence Length = 143863 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 atacatattaactatttaca 156 |||||||||||||||||||| Sbjct: 83431 atacatattaactatttaca 83412
>gb|AC146534.3| Otolemur garnettii clone CH256-50E17, complete sequence Length = 139631 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 tttatacatattaactattt 153 |||||||||||||||||||| Sbjct: 133113 tttatacatattaactattt 133094
>gb|CP000225.1| Drosophila melanogaster genomic scaffold 211000022280724 Length = 820587 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 tcgcattgctgcacacattg 116 |||||||||||||||||||| Sbjct: 430043 tcgcattgctgcacacattg 430062
>gb|CP000223.1| Drosophila melanogaster genomic scaffold 211000022280790 Length = 626829 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 tcttacacttctatttatac 140 |||||||||||||||||||| Sbjct: 559851 tcttacacttctatttatac 559832
>gb|CP000203.1| Drosophila melanogaster genomic scaffold 211000022280760 Length = 90124 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 tcttacacttctatttatac 140 |||||||||||||||||||| Sbjct: 36176 tcttacacttctatttatac 36157
>gb|CP000191.1| Drosophila melanogaster genomic scaffold 211000022280172 Length = 132906 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 tcttacacttctatttatac 140 |||||||||||||||||||| Sbjct: 30245 tcttacacttctatttatac 30264 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,053,980 Number of Sequences: 3902068 Number of extensions: 2053980 Number of successful extensions: 41035 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 41011 Number of HSP's gapped (non-prelim): 24 length of query: 282 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 260 effective length of database: 17,147,199,772 effective search space: 4458271940720 effective search space used: 4458271940720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)