>GLTB_MAIZE (P23225) Ferredoxin-dependent glutamate synthase, chloroplast|
            precursor (EC 1.4.7.1) (Fd-GOGAT)
          Length = 1616

 Score =  187 bits (474), Expect = 4e-47
 Identities = 93/103 (90%), Positives = 95/103 (92%)
 Frame = -3

Query: 724  AGMTGGLAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKIL 545
            AGMTGGLAY+LDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGS KG  IL
Sbjct: 1514 AGMTGGLAYILDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSEKGIAIL 1573

Query: 544  SEWEAYLPLFWQLVPPSEEDSPEACAEFERVLARQKTAVQSAK 416
             EWEAYLPLFWQLVPPSEEDSPEACAEFERVLA+Q T   SAK
Sbjct: 1574 REWEAYLPLFWQLVPPSEEDSPEACAEFERVLAKQATTQLSAK 1616

>GLTB_SPIOL (Q43155) Ferredoxin-dependent glutamate synthase, chloroplast (EC|
            1.4.7.1) (Fd-GOGAT)
          Length = 1517

 Score =  156 bits (394), Expect = 7e-38
 Identities = 76/102 (74%), Positives = 89/102 (87%)
 Frame = -3

Query: 724  AGMTGGLAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKIL 545
            AGMTGGLAY+LDEDDTL+PKVNKEIVK+QRV AP GQMQLK LIEA+VEKTGS+KGA IL
Sbjct: 1417 AGMTGGLAYILDEDDTLIPKVNKEIVKIQRVTAPVGQMQLKNLIEAHVEKTGSSKGASIL 1476

Query: 544  SEWEAYLPLFWQLVPPSEEDSPEACAEFERVLARQKTAVQSA 419
             +W+ YLPLFWQLVPPSEED+PEA A FE+ +  +  ++QSA
Sbjct: 1477 KDWDKYLPLFWQLVPPSEEDTPEASAMFEQ-MTSEGASLQSA 1517

>GLTB1_ARATH (Q9ZNZ7) Ferredoxin-dependent glutamate synthase 1, chloroplast|
            precursor (EC 1.4.7.1) (Fd-GOGAT 1)
          Length = 1648

 Score =  152 bits (385), Expect = 8e-37
 Identities = 72/97 (74%), Positives = 85/97 (87%)
 Frame = -3

Query: 724  AGMTGGLAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKIL 545
            AGMTGGLAY+LDEDDTL+PK+N+EIVK+QRV APAG++QLK LIEA+VEKTGS+KGA IL
Sbjct: 1548 AGMTGGLAYLLDEDDTLLPKINREIVKIQRVTAPAGELQLKSLIEAHVEKTGSSKGATIL 1607

Query: 544  SEWEAYLPLFWQLVPPSEEDSPEACAEFERVLARQKT 434
            +EWE YLPLFWQLVPPSEED+PEA A + R    + T
Sbjct: 1608 NEWEKYLPLFWQLVPPSEEDTPEASAAYVRTSTGEVT 1644

>GLTB2_ARATH (Q9T0P4) Ferredoxin-dependent glutamate synthase 2, chloroplast|
            precursor (EC 1.4.7.1) (Fd-GOGAT 2)
          Length = 1629

 Score =  137 bits (344), Expect = 4e-32
 Identities = 63/84 (75%), Positives = 76/84 (90%)
 Frame = -3

Query: 724  AGMTGGLAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKIL 545
            AGMTGGLAY+LDED+TL+PK+NKEIVK+QRV +P GQ QLK LI+A+VEKTGS+KGA I+
Sbjct: 1523 AGMTGGLAYILDEDNTLLPKMNKEIVKIQRVTSPVGQTQLKSLIQAHVEKTGSSKGAMIV 1582

Query: 544  SEWEAYLPLFWQLVPPSEEDSPEA 473
             EW+ YL +FWQLVPPSEED+PEA
Sbjct: 1583 EEWDKYLAMFWQLVPPSEEDTPEA 1606

>GLTS_SYNY3 (P55038) Ferredoxin-dependent glutamate synthase 2 (EC 1.4.7.1)|
            (FD-GOGAT)
          Length = 1556

 Score =  105 bits (263), Expect = 1e-22
 Identities = 52/84 (61%), Positives = 60/84 (71%)
 Frame = -3

Query: 724  AGMTGGLAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKIL 545
            AGMTGGLAY LDE   L  K+N EI+ +QR+ A  G+ QLK LI A+VE TGS KG  IL
Sbjct: 1458 AGMTGGLAYFLDEVGDLPEKINPEIITLQRITASKGEEQLKSLITAHVEHTGSPKGKAIL 1517

Query: 544  SEWEAYLPLFWQLVPPSEEDSPEA 473
            + W  YL  FWQ VPPSE+DSPEA
Sbjct: 1518 ANWSDYLGKFWQAVPPSEKDSPEA 1541

>GLTB_PORPU (P51375) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)|
            (Fd-GOGAT)
          Length = 1538

 Score =  101 bits (252), Expect = 2e-21
 Identities = 49/83 (59%), Positives = 58/83 (69%)
 Frame = -3

Query: 724  AGMTGGLAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKIL 545
            AGMTGGLAY LDE++  + +VN EIVK+QRV   AG+ QLK LIE +  KTGS K   IL
Sbjct: 1443 AGMTGGLAYFLDEENKFIERVNSEIVKVQRVITKAGEQQLKNLIENHSAKTGSLKAHNIL 1502

Query: 544  SEWEAYLPLFWQLVPPSEEDSPE 476
              W  YLP FWQ+VPPSE +  E
Sbjct: 1503 ENWNTYLPQFWQVVPPSEANIEE 1525

>GLTB_CYACA (O19906) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)|
            (Fd-GOGAT)
          Length = 1549

 Score = 88.6 bits (218), Expect = 2e-17
 Identities = 44/83 (53%), Positives = 56/83 (67%)
 Frame = -3

Query: 724  AGMTGGLAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKIL 545
            AGMTGG+AY LDE   L  KVN +IV++QRV     + QL  LIE +V KTGS K   IL
Sbjct: 1455 AGMTGGIAYFLDEYSNLPEKVNLDIVRIQRVVTNEARKQLIQLIEKHVLKTGSKKAVLIL 1514

Query: 544  SEWEAYLPLFWQLVPPSEEDSPE 476
             +WE ++  FWQ+VPPSE ++ E
Sbjct: 1515 QQWEIFIHYFWQIVPPSESETSE 1537

>GLTB_ANTSP (Q06434) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)|
            (Fd-GOGAT)
          Length = 1536

 Score = 86.3 bits (212), Expect = 9e-17
 Identities = 43/79 (54%), Positives = 53/79 (67%)
 Frame = -3

Query: 724  AGMTGGLAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKIL 545
            AGMTGG+AY LDED+TL  K+N EIVK QR+     + QLK ++E Y  KT S K   IL
Sbjct: 1443 AGMTGGIAYFLDEDNTLKNKLNTEIVKAQRLLTKESEEQLKNIMELYEIKTKSEKAKLIL 1502

Query: 544  SEWEAYLPLFWQLVPPSEE 488
              W  YL  F+Q+VPPSE+
Sbjct: 1503 DNWSQYLAKFYQIVPPSEQ 1521

>GLTB_AZOBR (Q05755) Glutamate synthase [NADPH] large chain precursor (EC|
            1.4.1.13) (Glutamate synthase alpha subunit)
            (NADPH-GOGAT) (GLTS alpha chain)
          Length = 1515

 Score = 68.2 bits (165), Expect = 3e-11
 Identities = 35/75 (46%), Positives = 48/75 (64%)
 Frame = -3

Query: 724  AGMTGGLAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKIL 545
            AGMTGG+AY+ D DD+L   +N E V  QR+     + QLK LIE +V +T S   A+IL
Sbjct: 1421 AGMTGGMAYVYDLDDSLPLYINDESVIFQRIEVGHYESQLKHLIEEHVTETQSRFAAEIL 1480

Query: 544  SEWEAYLPLFWQLVP 500
            ++W   +  FWQ+VP
Sbjct: 1481 NDWAREVTKFWQVVP 1495

>GLTB_SYNY3 (P55037) Ferredoxin-dependent glutamate synthase 1 (EC 1.4.7.1)|
            (Fd-GOGAT)
          Length = 1550

 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 33/101 (32%), Positives = 57/101 (56%)
 Frame = -3

Query: 724  AGMTGGLAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKIL 545
            AGM+GG+AY+ DE      + N  +V ++++  P     LK LI+ +V  T S KG  +L
Sbjct: 1435 AGMSGGVAYIFDETGDFATRCNSAMVGLEKLEDPEEIKDLKELIQNHVNYTDSAKGKAVL 1494

Query: 544  SEWEAYLPLFWQLVPPSEEDSPEACAEFERVLARQKTAVQS 422
            ++WEA +P F +++P           +++RVL   K A+++
Sbjct: 1495 ADWEASIPKFVKVMP----------RDYKRVLQAIKKALEA 1525

>GLTB_ECOLI (P09831) Glutamate synthase [NADPH] large chain precursor (EC|
            1.4.1.13) (Glutamate synthase alpha subunit)
            (NADPH-GOGAT) (GLTS alpha chain)
          Length = 1517

 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
 Frame = -3

Query: 724  AGMTGGLAYMLDEDDTLVPKVNKEIVKMQRVNAPA-GQMQLKGLIEAYVEKTGSTKGAKI 548
            AGMTGG AY+LDE      +VN E+V++  V+A A  +  L+GLI  +V+ TGS +G +I
Sbjct: 1418 AGMTGGFAYVLDESGDFRKRVNPELVEVLSVDALAIHEEHLRGLITEHVQHTGSQRGEEI 1477

Query: 547  LSEWEAYLPLFWQLVPPSEEDSPEACAEFERVLARQKTAVQ 425
            L+ W  +   F  LV P   D         R  A  +   Q
Sbjct: 1478 LANWSTFATKF-ALVKPKSSDVKALLGHRSRSAAELRVQAQ 1517

>GLSN_MEDSA (Q03460) Glutamate synthase [NADH], chloroplast precursor (EC|
            1.4.1.14) (NADH-GOGAT)
          Length = 2194

 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 33/101 (32%), Positives = 53/101 (52%)
 Frame = -3

Query: 724  AGMTGGLAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKIL 545
            AGM+GG+AY+LD D T   + N E+V + +V      + L+ LI+ +   T S    ++L
Sbjct: 1534 AGMSGGIAYVLDVDGTFQSRCNLELVDLDKVEEEEDIITLRMLIQQHQRHTNSLLAKEVL 1593

Query: 544  SEWEAYLPLFWQLVPPSEEDSPEACAEFERVLARQKTAVQS 422
             ++E  LP F ++ P           E++RVLA  K+   S
Sbjct: 1594 VDFENLLPKFVKVFP----------REYKRVLASMKSDAAS 1624

>GLT1_SCHPO (Q9C102) Putative glutamate synthase [NADPH] (EC 1.4.1.13)|
            (NADPH-GOGAT)
          Length = 2111

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 33/103 (32%), Positives = 53/103 (51%)
 Frame = -3

Query: 724  AGMTGGLAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKIL 545
            AGM+GG+AY+ D       K+N E+V +  V   A    L+GLI+ +   TGS    +IL
Sbjct: 1477 AGMSGGIAYVYDMQMDFAGKINTEMVDISSVTDAAEIAFLRGLIQDHRHYTGSQVADRIL 1536

Query: 544  SEWEAYLPLFWQLVPPSEEDSPEACAEFERVLARQKTAVQSAK 416
            S++  +L  F +++P           E++ VL R+    + AK
Sbjct: 1537 SDFPRHLSRFVKVLP----------REYKAVLEREAAKKEEAK 1569

>GLT1_YEAST (Q12680) Glutamate synthase [NADPH] precursor (EC 1.4.1.13)|
            (NADPH-GOGAT)
          Length = 2144

 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
 Frame = -3

Query: 724  AGMTGGLAYMLDED-DTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKI 548
            +G TGG+AY L  D D  V K+NK+ V+++ +  P     +K LI+ +   T S   A+I
Sbjct: 1471 SGATGGIAYCLTSDYDDFVGKINKDTVELESLCDPVEIAFVKNLIQEHWNYTQSDLAARI 1530

Query: 547  LSEWEAYLPLFWQLVPPSEEDSPEACAEFERVLARQKTAVQSAK 416
            L  +  YL  F +++P           ++++VL ++K     AK
Sbjct: 1531 LGNFNHYLKDFVKVIP----------TDYKKVLLKEKAEAAKAK 1564

>GLTA_BACSU (P39812) Glutamate synthase [NADPH] large chain (EC 1.4.1.13)|
            (NADPH-GOGAT)
          Length = 1520

 Score = 46.6 bits (109), Expect = 8e-05
 Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
 Frame = -3

Query: 724  AGMTGGLAYMLDED-DTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKI 548
            AGM+GG+AY+L ED      K N E++  + +       Q+K ++E +   T S K   +
Sbjct: 1396 AGMSGGIAYVLTEDVKRFKRKCNLEMILFESLEDEKEIQQIKAMLERHTAYTNSQKAEDL 1455

Query: 547  LSEWEAYLPLFWQLVP 500
            L +WE  +  F +++P
Sbjct: 1456 LDQWEDSVKKFVKVIP 1471

>DMXL1_MOUSE (Q6PNC0) Protein DmX-like 1 (X-like 1 protein)|
          Length = 3013

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = -1

Query: 522  HSSGSWCHPAKKTLLKLVLSLREYLPGKKQLYNLLSDTSQS 400
            +SS S  HP KKTL + + SL + + GKK +++   D   S
Sbjct: 1267 NSSSSGLHPPKKTLTRSMTSLAQKICGKKSIFDPSVDMEDS 1307

>POTE1_MOUSE (Q91WC1) Protection of telomeres 1 (mPot1) (POT1-like telomere|
           end-binding protein)
          Length = 640

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +2

Query: 179 IYRGGCLGCKTLQKNPRRNLQARFQKMPWT 268
           ++  GC  C +L+  P +NL +RF K PWT
Sbjct: 504 VHHYGCKQCSSLK--PIQNLNSRFHKGPWT 531

>ACN9_RAT (Q6TUF2) ACN9 protein homolog, mitochondrial precursor (Liver|
           regeneration-related protein LRRGT00092)
          Length = 125

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 8/76 (10%)
 Frame = -3

Query: 673 VPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEK-------TGSTKGAKILSEWEAYLPLF 515
           V  + + I+++ R   P     LK L + YV+         G  +  + L EWE Y  + 
Sbjct: 9   VRSLYRRILQLHRALPP----DLKALGDQYVKDEFRRHKTVGPGEAQRFLKEWETYAAVL 64

Query: 514 WQLVPPSEEDSP-EAC 470
           WQ    S + S  +AC
Sbjct: 65  WQQAKDSRQSSSGKAC 80

>APC2_YEAST (Q12440) Anaphase-promoting complex subunit 2|
          Length = 853

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
 Frame = +2

Query: 482 RVFFAGWHQLPEEWQICLPLAQ----NFSTFRAARFFNIGLNQALELHLPSWSINSLHLD 649
           R+F   ++ L E+W  CL L +     F+    + +   G+   LE   P+   +  +L+
Sbjct: 516 RLFTLKFYTLDEKWTRCLKLIREKIVKFTETSHSNYITNGILGLLETTAPAADADQSNLN 575

Query: 650 NLLVNLWD 673
           ++ V LWD
Sbjct: 576 SIDVMLWD 583


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,755,533
Number of Sequences: 219361
Number of extensions: 2071640
Number of successful extensions: 5643
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 5500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5641
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7479594804
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)