ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd24a16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK065064.1| Oryza sativa (japonica cultivar-group) cDNA clon... 127 5e-26
2dbj|AK062131.1| Oryza sativa (japonica cultivar-group) cDNA clon... 127 5e-26
3dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
4gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 121 3e-24
5emb|AL731885.4|CNS08C8P Oryza sativa chromosome 12, . BAC OSJNBb... 121 3e-24
6emb|AL845347.4|CNS08CB9 Oryza sativa chromosome 12, . BAC OSJNBb... 121 3e-24
7dbj|AK066418.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 7e-16
8emb|AL731878.4|CNS08C8I Oryza sativa chromosome 3, . BAC OSJNBb0... 46 0.14
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
10gb|AC140134.2| Homo sapiens chromosome 5 clone RP11-1319K7, comp... 44 0.54
11gb|AC139778.2| Homo sapiens chromosome 5 clone RP11-1012N14, com... 44 0.54
12gb|AC139277.2| Homo sapiens chromosome 5 clone RP11-619K7, compl... 44 0.54
13gb|AC091956.3| Homo sapiens chromosome 5 clone RP11-430F16, comp... 44 0.54
14gb|AC013476.9| Homo sapiens BAC clone RP11-525G12 from 2, comple... 44 0.54
15gb|AC010217.6| Homo sapiens chromosome 5 clone CTC-202F24, compl... 44 0.54
16gb|AC016554.8| Homo sapiens chromosome 5 clone CTC-340H12, compl... 44 0.54
17gb|AC022119.4|AC022119 Homo sapiens chromosome 5 clone CTC-566F1... 44 0.54
18gb|AC139834.2| Homo sapiens chromosome 5 clone RP11-974F13, comp... 44 0.54
19gb|AC139497.3| Homo sapiens chromosome 5 clone RP11-855C21, comp... 44 0.54
20gb|AC139494.2| Homo sapiens chromosome 5 clone RP11-846E15, comp... 44 0.54
21gb|AC004999.1|AC004999 Homo sapiens PAC clone RP1-215P15 from 5q... 44 0.54
22emb|AL442646.14| Human DNA sequence from clone RP11-322A17 on ch... 42 2.2
23gb|AC108062.3| Homo sapiens BAC clone RP11-420A23 from 4, comple... 42 2.2
24gb|AC152930.2| Xenopus tropicalis clone ISB1-158G10, complete se... 42 2.2
25gb|AC138300.8| Mus musculus chromosome 14, clone RP23-187B20, co... 40 8.5
26ref|XM_596546.2| PREDICTED: Bos taurus similar to neutrophil cyt... 40 8.5
27ref|XM_656127.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 8.5
28emb|AL356072.21| Human DNA sequence from clone RP11-141M15 on ch... 40 8.5
29emb|AL353803.23| Human DNA sequence from clone RP11-65J3 on chro... 40 8.5
30emb|AL078603.4|HSJ364H10 Human DNA sequence from clone RP3-364H1... 40 8.5
31gb|AC083886.19| Homo sapiens 3 BAC RP11-364F11 (Roswell Park Can... 40 8.5
32emb|BX088558.3| Mouse DNA sequence from clone RP23-252M5 on chro... 40 8.5
33gb|AC010571.8| Drosophila melanogaster 3L BAC RP98-22O3 (Roswell... 40 8.5
34gb|AC027544.11| Homo sapiens chromosome 11, clone RP11-613F22, c... 40 8.5
35gb|AC154729.2| Mus musculus BAC clone RP24-377H17 from chromosom... 40 8.5
36dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
37gb|AC112694.12| Homo sapiens chromosome 11, clone RP11-504G3, co... 40 8.5
38dbj|AP004554.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
39dbj|AP005485.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
40gb|AE003595.3| Drosophila melanogaster chromosome 3L, section 76... 40 8.5
41gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 8.5 
>dbj|AK065064.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001J19, full
            insert sequence
          Length = 3803

 Score =  127 bits (64), Expect = 5e-26
 Identities = 93/102 (91%), Gaps = 3/102 (2%)
 Strand = Plus / Minus

                                                                        
Query: 520  aagctgctatatccatgcaagagggcctgctcggtcattgttagctgcttgagggcggcc 579
            ||||| ||||||||||||||||| ||||   ||||||||||| |||||||||||||||||
Sbjct: 3116 aagctactatatccatgcaagagagcct---cggtcattgtttgctgcttgagggcggcc 3060

                                                      
Query: 580  cctggttggagttggtggcctgttggcgtttagttcctgcat 621
            ||| ||||||||||| ||||||||||| ||||||||||||||
Sbjct: 3059 ccttgttggagttggcggcctgttggcatttagttcctgcat 3018



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 34/34 (100%)
 Strand = Plus / Minus

                                              
Query: 104  ctagacacaggaaaagaatacctagtacaataac 137
            ||||||||||||||||||||||||||||||||||
Sbjct: 3543 ctagacacaggaaaagaatacctagtacaataac 3510
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>dbj|AK062131.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-E05, full
           insert sequence
          Length = 1102

 Score =  127 bits (64), Expect = 5e-26
 Identities = 93/102 (91%), Gaps = 3/102 (2%)
 Strand = Plus / Minus

                                                                       
Query: 520 aagctgctatatccatgcaagagggcctgctcggtcattgttagctgcttgagggcggcc 579
           ||||| ||||||||||||||||| ||||   ||||||||||| |||||||||||||||||
Sbjct: 475 aagctactatatccatgcaagagagcct---cggtcattgtttgctgcttgagggcggcc 419

                                                     
Query: 580 cctggttggagttggtggcctgttggcgtttagttcctgcat 621
           ||| ||||||||||| ||||||||||| ||||||||||||||
Sbjct: 418 ccttgttggagttggcggcctgttggcatttagttcctgcat 377



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 34/34 (100%)
 Strand = Plus / Minus

                                             
Query: 104 ctagacacaggaaaagaatacctagtacaataac 137
           ||||||||||||||||||||||||||||||||||
Sbjct: 902 ctagacacaggaaaagaatacctagtacaataac 869
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  121 bits (61), Expect = 3e-24
 Identities = 90/99 (90%), Gaps = 3/99 (3%)
 Strand = Plus / Plus

                                                                            
Query: 520      aagctgctatatccatgcaagagggcctgctcggtcattgttagctgcttgagggcggcc 579
                ||||| ||||||||||||||||| ||||   ||||||||||| |||||||||||||||||
Sbjct: 26341112 aagctactatatccatgcaagagagcct---cggtcattgtttgctgcttgagggcggcc 26341168

                                                       
Query: 580      cctggttggagttggtggcctgttggcgtttagttcctg 618
                ||| ||||||||||| ||||||||||| |||||||||||
Sbjct: 26341169 ccttgttggagttggcggcctgttggcatttagttcctg 26341207



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                                  
Query: 104      ctagacacaggaaaagaatacctagtacaataac 137
                ||||||||||||||||||||||||||||||||||
Sbjct: 26340685 ctagacacaggaaaagaatacctagtacaataac 26340718
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  121 bits (61), Expect = 3e-24
 Identities = 90/99 (90%), Gaps = 3/99 (3%)
 Strand = Plus / Plus

                                                                            
Query: 520      aagctgctatatccatgcaagagggcctgctcggtcattgttagctgcttgagggcggcc 579
                ||||| ||||||||||||||||| ||||   ||||||||||| |||||||||||||||||
Sbjct: 26269280 aagctactatatccatgcaagagagcct---cggtcattgtttgctgcttgagggcggcc 26269336

                                                       
Query: 580      cctggttggagttggtggcctgttggcgtttagttcctg 618
                ||| ||||||||||| ||||||||||| |||||||||||
Sbjct: 26269337 ccttgttggagttggcggcctgttggcatttagttcctg 26269375



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                                  
Query: 104      ctagacacaggaaaagaatacctagtacaataac 137
                ||||||||||||||||||||||||||||||||||
Sbjct: 26268853 ctagacacaggaaaagaatacctagtacaataac 26268886
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>emb|AL731885.4|CNS08C8P Oryza sativa chromosome 12, . BAC OSJNBb0016A10 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 133978

 Score =  121 bits (61), Expect = 3e-24
 Identities = 90/99 (90%), Gaps = 3/99 (3%)
 Strand = Plus / Plus

                                                                          
Query: 520    aagctgctatatccatgcaagagggcctgctcggtcattgttagctgcttgagggcggcc 579
              ||||| ||||||||||||||||| ||||   ||||||||||| |||||||||||||||||
Sbjct: 105096 aagctactatatccatgcaagagagcct---cggtcattgtttgctgcttgagggcggcc 105152

                                                     
Query: 580    cctggttggagttggtggcctgttggcgtttagttcctg 618
              ||| ||||||||||| ||||||||||| |||||||||||
Sbjct: 105153 ccttgttggagttggcggcctgttggcatttagttcctg 105191



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                                
Query: 104    ctagacacaggaaaagaatacctagtacaataac 137
              ||||||||||||||||||||||||||||||||||
Sbjct: 104669 ctagacacaggaaaagaatacctagtacaataac 104702
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>emb|AL845347.4|CNS08CB9 Oryza sativa chromosome 12, . BAC OSJNBb0101I10 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 131689

 Score =  121 bits (61), Expect = 3e-24
 Identities = 90/99 (90%), Gaps = 3/99 (3%)
 Strand = Plus / Plus

                                                                         
Query: 520   aagctgctatatccatgcaagagggcctgctcggtcattgttagctgcttgagggcggcc 579
             ||||| ||||||||||||||||| ||||   ||||||||||| |||||||||||||||||
Sbjct: 55384 aagctactatatccatgcaagagagcct---cggtcattgtttgctgcttgagggcggcc 55440

                                                    
Query: 580   cctggttggagttggtggcctgttggcgtttagttcctg 618
             ||| ||||||||||| ||||||||||| |||||||||||
Sbjct: 55441 ccttgttggagttggcggcctgttggcatttagttcctg 55479



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                               
Query: 104   ctagacacaggaaaagaatacctagtacaataac 137
             ||||||||||||||||||||||||||||||||||
Sbjct: 54957 ctagacacaggaaaagaatacctagtacaataac 54990
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>dbj|AK066418.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067H19, full
            insert sequence
          Length = 3349

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 56/59 (94%)
 Strand = Plus / Minus

                                                                       
Query: 563  gctgcttgagggcggcccctggttggagttggtggcctgttggcgtttagttcctgcat 621
            |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||
Sbjct: 3349 gctgcttgagggcggccccttgttggagttggcggcctgttggcatttagttcctgcat 3291
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>emb|AL731878.4|CNS08C8I Oryza sativa chromosome 3, . BAC OSJNBb0116P11 of library OSJNBb from
             chromosome 3 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 128559

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 116   aaagaatacctagtacaataacactat 142
             |||||||| ||||||||||||||||||
Sbjct: 43198 aaagaatagctagtacaataacactat 43224



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 567   cttgagggcggcccctggttggagttggtggcctgtt 603
             |||| ||||||||||| |||||||| ||||| |||||
Sbjct: 43624 cttgggggcggccccttgttggagtcggtggtctgtt 43660
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 116      aaagaatacctagtacaataacactat 142
                |||||||| ||||||||||||||||||
Sbjct: 24847570 aaagaatagctagtacaataacactat 24847596



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 567      cttgagggcggcccctggttggagttggtggcctgtt 603
                |||| ||||||||||| |||||||| ||||| |||||
Sbjct: 24847996 cttgggggcggccccttgttggagtcggtggtctgtt 24848032
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>gb|AC140134.2| Homo sapiens chromosome 5 clone RP11-1319K7, complete sequence
          Length = 217820

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 91    tgggaaaaagaaactagacaca 112
             ||||||||||||||||||||||
Sbjct: 72032 tgggaaaaagaaactagacaca 72011
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>gb|AC139778.2| Homo sapiens chromosome 5 clone RP11-1012N14, complete sequence
          Length = 180014

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 91     tgggaaaaagaaactagacaca 112
              ||||||||||||||||||||||
Sbjct: 155485 tgggaaaaagaaactagacaca 155506
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>gb|AC139277.2| Homo sapiens chromosome 5 clone RP11-619K7, complete sequence
          Length = 199996

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 91     tgggaaaaagaaactagacaca 112
              ||||||||||||||||||||||
Sbjct: 165824 tgggaaaaagaaactagacaca 165803
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>gb|AC091956.3| Homo sapiens chromosome 5 clone RP11-430F16, complete sequence
          Length = 209754

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 91     tgggaaaaagaaactagacaca 112
              ||||||||||||||||||||||
Sbjct: 163725 tgggaaaaagaaactagacaca 163746
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>gb|AC013476.9| Homo sapiens BAC clone RP11-525G12 from 2, complete sequence
          Length = 142305

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 93   ggaaaaagaaactagacacaggaaaa 118
            |||||||||||||||| |||||||||
Sbjct: 5594 ggaaaaagaaactagaaacaggaaaa 5569
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>gb|AC010217.6| Homo sapiens chromosome 5 clone CTC-202F24, complete sequence
          Length = 169137

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 91    tgggaaaaagaaactagacaca 112
             ||||||||||||||||||||||
Sbjct: 81622 tgggaaaaagaaactagacaca 81643
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>gb|AC016554.8| Homo sapiens chromosome 5 clone CTC-340H12, complete sequence
          Length = 113213

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 91    tgggaaaaagaaactagacaca 112
             ||||||||||||||||||||||
Sbjct: 43631 tgggaaaaagaaactagacaca 43610
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>gb|AC022119.4|AC022119 Homo sapiens chromosome 5 clone CTC-566F17, complete sequence
          Length = 155974

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 91   tgggaaaaagaaactagacaca 112
            ||||||||||||||||||||||
Sbjct: 5057 tgggaaaaagaaactagacaca 5036
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>gb|AC139834.2| Homo sapiens chromosome 5 clone RP11-974F13, complete sequence
          Length = 185457

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 91     tgggaaaaagaaactagacaca 112
              ||||||||||||||||||||||
Sbjct: 134507 tgggaaaaagaaactagacaca 134486
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>gb|AC139497.3| Homo sapiens chromosome 5 clone RP11-855C21, complete sequence
          Length = 199004

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 91    tgggaaaaagaaactagacaca 112
             ||||||||||||||||||||||
Sbjct: 35222 tgggaaaaagaaactagacaca 35201
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>gb|AC139494.2| Homo sapiens chromosome 5 clone RP11-846E15, complete sequence
          Length = 210288

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 91    tgggaaaaagaaactagacaca 112
             ||||||||||||||||||||||
Sbjct: 76770 tgggaaaaagaaactagacaca 76749
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>gb|AC004999.1|AC004999 Homo sapiens PAC clone RP1-215P15 from 5q12, complete sequence
          Length = 129541

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 91    tgggaaaaagaaactagacaca 112
             ||||||||||||||||||||||
Sbjct: 92530 tgggaaaaagaaactagacaca 92551
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>emb|AL442646.14| Human DNA sequence from clone RP11-322A17 on chromosome X Contains a
             novel pseudogene and a lactate dehydrogenase B pseudogene,
             complete sequence
          Length = 155885

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 228   aggtgaagcctagcaggcagg 248
             |||||||||||||||||||||
Sbjct: 78163 aggtgaagcctagcaggcagg 78143
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>gb|AC108062.3| Homo sapiens BAC clone RP11-420A23 from 4, complete sequence
          Length = 169597

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 96    aaaagaaactagacacaggaaaaga 120
             |||| ||||||||||||||||||||
Sbjct: 36525 aaaaaaaactagacacaggaaaaga 36549
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>gb|AC152930.2| Xenopus tropicalis clone ISB1-158G10, complete sequence
          Length = 95175

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 451   ggacagaatgataaatatagc 471
             |||||||||||||||||||||
Sbjct: 50800 ggacagaatgataaatatagc 50780
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>gb|AC138300.8| Mus musculus chromosome 14, clone RP23-187B20, complete sequence
          Length = 213955

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 110    acaggaaaagaatacctagtacaa 133
              |||||||| |||||||||||||||
Sbjct: 207688 acaggaaatgaatacctagtacaa 207711
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>ref|XM_596546.2| PREDICTED: Bos taurus similar to neutrophil cytosolic factor 1
           (LOC518356), partial mRNA
          Length = 3266

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 84  aacatgttgggaaaaagaaa 103
           ||||||||||||||||||||
Sbjct: 95  aacatgttgggaaaaagaaa 114
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>ref|XM_656127.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3615.2), mRNA
          Length = 3150

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 532  ccatgcaagagggcctgctc 551
            ||||||||||||||||||||
Sbjct: 2702 ccatgcaagagggcctgctc 2683
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>emb|AL356072.21| Human DNA sequence from clone RP11-141M15 on chromosome 1 Contains the
             DNB5 gene for deleted in neuroblastoma 5 and the 3' end of
             the RERE gene for arginine-glutamic acid dipeptide (RE)
             repeats (KIAA0458), complete sequence
          Length = 122331

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    aaaagaaactagacacagga 115
             ||||||||||||||||||||
Sbjct: 26619 aaaagaaactagacacagga 26638
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>emb|AL353803.23| Human DNA sequence from clone RP11-65J3 on chromosome 9 Contains three
              novel genes, the 5' end of a novel gene, a novel pseudogene
              and seven CpG islands, complete sequence
          Length = 165696

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 142    tcatccccttctgccaccccctcc 165
              |||||||||||||||||| |||||
Sbjct: 104211 tcatccccttctgccacctcctcc 104234
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>emb|AL078603.4|HSJ364H10 Human DNA sequence from clone RP3-364H10 on chromosome 6q16.1-16.3,
             complete sequence
          Length = 150355

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 293   agggaaaaagcttggagagctctg 316
             ||||||| ||||||||||||||||
Sbjct: 47033 agggaaagagcttggagagctctg 47010
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>gb|AC083886.19| Homo sapiens 3 BAC RP11-364F11 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 94535

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 137   cactatcatccccttctgccaccc 160
             ||||||||||||||||| ||||||
Sbjct: 92315 cactatcatccccttctcccaccc 92292
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>emb|BX088558.3| Mouse DNA sequence from clone RP23-252M5 on chromosome 4, complete
              sequence
          Length = 122069

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 474    gaacccactgacggagacat 493
              ||||||||||||||||||||
Sbjct: 101321 gaacccactgacggagacat 101302
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>gb|AC010571.8| Drosophila melanogaster 3L BAC RP98-22O3 (Roswell Park Cancer Institute
             Drosophila BAC library) complete sequence
          Length = 169138

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 391   cctgttgccattgttgttgt 410
             ||||||||||||||||||||
Sbjct: 96849 cctgttgccattgttgttgt 96830
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>gb|AC027544.11| Homo sapiens chromosome 11, clone RP11-613F22, complete sequence
          Length = 196410

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    aaagaaactagacacaggaa 116
             ||||||||||||||||||||
Sbjct: 35297 aaagaaactagacacaggaa 35278
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>gb|AC154729.2| Mus musculus BAC clone RP24-377H17 from chromosome 14, complete
            sequence
          Length = 150383

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 110  acaggaaaagaatacctagtacaa 133
            |||||||| |||||||||||||||
Sbjct: 4541 acaggaaatgaatacctagtacaa 4564
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 80       ttgcaacatgttgggaaaaa 99
                ||||||||||||||||||||
Sbjct: 13949447 ttgcaacatgttgggaaaaa 13949428
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>gb|AC112694.12| Homo sapiens chromosome 11, clone RP11-504G3, complete sequence
          Length = 77162

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    aaagaaactagacacaggaa 116
             ||||||||||||||||||||
Sbjct: 13212 aaagaaactagacacaggaa 13231
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>dbj|AP004554.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0005C02
          Length = 62423

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 80   ttgcaacatgttgggaaaaa 99
            ||||||||||||||||||||
Sbjct: 3770 ttgcaacatgttgggaaaaa 3751
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>dbj|AP005485.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1136_D12
          Length = 105521

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    ttgcaacatgttgggaaaaa 99
             ||||||||||||||||||||
Sbjct: 93842 ttgcaacatgttgggaaaaa 93823
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>gb|AE003595.3| Drosophila melanogaster chromosome 3L, section 76 of 83 of the complete
              sequence
          Length = 294272

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 391    cctgttgccattgttgttgt 410
              ||||||||||||||||||||
Sbjct: 164568 cctgttgccattgttgttgt 164549
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 142     tcatccccttctgccaccccctcc 165
               |||||||| |||||||||||||||
Sbjct: 1360647 tcatccccctctgccaccccctcc 1360624


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,995,570
Number of Sequences: 3902068
Number of extensions: 4995570
Number of successful extensions: 97412
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97256
Number of HSP's gapped (non-prelim): 150
length of query: 624
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 601
effective length of database: 17,143,297,704
effective search space: 10303121920104
effective search space used: 10303121920104
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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