>RIN4_ARATH (Q8GYN5) RPM1-interacting protein 4|
          Length = 211

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 21/39 (53%), Positives = 29/39 (74%)
 Frame = -3

Query: 352 SEESGRPLPKFGEWDVNDPASXDGFTVIFNKARDEKKAG 236
           S E    +PKFG+WD N+P+S DG+T IFNK R+E+ +G
Sbjct: 141 SPEKVTVVPKFGDWDENNPSSADGYTHIFNKVREERSSG 179

>TRP_DROME (P19334) Transient receptor potential protein|
          Length = 1275

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = -3

Query: 310  DVNDPASXDGFTVIFNKARDEKKAGNGQDTESPCKDAR 197
            +V++ +  DG      K  D+KKAG+ +D + P KD++
Sbjct: 985  NVDEKSGADGKPGTMGKPTDDKKAGDDKDKQQPPKDSK 1022

>CARA_SULSO (Q59968) Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)|
           (Carbamoyl-phosphate synthetase glutamine chain)
          Length = 367

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +2

Query: 185 HPLSPGVFARGFSILSIPSLFLIPGFVEYNCESI 286
           H +  G++ RGFSI+ +P  F     +EYN + I
Sbjct: 192 HGILYGLYKRGFSIVRVPCSFSASKIIEYNPKGI 225

>DNAA_MYCSM (P49992) Chromosomal replication initiator protein dnaA|
          Length = 504

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 18/48 (37%), Positives = 25/48 (52%)
 Frame = +2

Query: 191 LSPGVFARGFSILSIPSLFLIPGFVEYNCESIXRSWVVDVPFAKLGQR 334
           + P V A GF++LS+P+      FV+   E   R  +V     KLGQR
Sbjct: 48  VKPLVIAEGFALLSVPT-----PFVQNEIERHLREPIVTALSRKLGQR 90


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,552,184
Number of Sequences: 219361
Number of extensions: 1283997
Number of successful extensions: 3129
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3129
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3362826254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)