>LMBL3_MOUSE (Q8BLB7) Lethal(3)malignant brain tumor-like 3 protein|
           (L(3)mbt-like 3 protein)
          Length = 883

 Score = 33.5 bits (75), Expect = 0.29
 Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 6/82 (7%)
 Frame = +3

Query: 243 EICPSALSQSSP*TSQLYQGRCPRRQYQNLPDQRQHQAL-----SPRA-QHPRQRQCPQI 404
           E  PS      P   Q  Q   P +Q Q  P  +Q Q       +P+A Q P+ +Q PQ+
Sbjct: 661 EPTPSVQQSQPPQQVQQVQHAQPPQQAQKAPQAQQAQQAQQAQQAPQAPQTPQPQQAPQV 720

Query: 405 QHLNQLVKRRHQVHPSCCQLPQ 470
           Q   Q  + +    P   Q PQ
Sbjct: 721 QQAQQAPQAQQAQQPQQAQQPQ 742

>RBF1_CANAL (Q00312) Transcription factor RBF1 (RPG-box-binding factor)|
           (Repressor-activator protein 1)
          Length = 527

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 20/54 (37%), Positives = 29/54 (53%)
 Frame = +3

Query: 312 RRQYQNLPDQRQHQALSPRAQHPRQRQCPQIQHLNQLVKRRHQVHPSCCQLPQP 473
           + Q + L   RQ QA + +AQ   QR+  Q+QH  Q  ++ HQ+     QL QP
Sbjct: 101 QHQQEQLQQYRQAQAQA-QAQAQAQREHQQLQHAYQQQQQLHQLGQLSQQLAQP 153

>ARFG_ARATH (P93022) Auxin response factor 7 (Non-phototropic hypocotyl 4)|
           (Protein BIPOSTO) (Auxin-responsive protein
           IAA21/IAA23/IAA25)
          Length = 1164

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +3

Query: 324 QNLPDQRQHQALSPRAQHP-RQRQCPQIQHLNQLVKRRHQVHPSC 455
           Q L  Q+Q Q LSP++Q P  Q Q  Q+Q L  L  + HQ   SC
Sbjct: 755 QRLQQQQQQQFLSPQSQLPHHQLQSQQLQQLPTL-SQGHQFPSSC 798

>TCF20_MOUSE (Q9EPQ8) Transcription factor 20 (Stromelysin 1 PDGF-responsive|
           element-binding protein) (SPRE-binding protein) (Nuclear
           factor SPBP)
          Length = 1983

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = +3

Query: 318 QYQNLPDQRQHQALSPRAQHPRQRQCPQIQHLNQLVKRRHQVHPSCCQLP 467
           QYQ     +Q Q    + Q  +Q+Q  Q+Q L Q + + HQ  P     P
Sbjct: 165 QYQQQASSQQQQQQQQQQQQQQQQQQQQVQQLRQQLYQSHQPLPQTTGQP 214

>LASP1_DROME (Q8I7C3) LIM and SH3 domain protein Lasp|
          Length = 657

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 23/80 (28%), Positives = 33/80 (41%)
 Frame = +3

Query: 231 YHSYEICPSALSQSSP*TSQLYQGRCPRRQYQNLPDQRQHQALSPRAQHPRQRQCPQIQH 410
           Y S ++     SQ +P  S +        Q Q    Q QHQ      QH +Q Q  Q QH
Sbjct: 149 YFSEQLAAEQFSQYAPTASPIPPAATTLHQQQQ---QLQHQQQQQYQQHQQQLQQQQHQH 205

Query: 411 LNQLVKRRHQVHPSCCQLPQ 470
            + L +++  + P   Q  Q
Sbjct: 206 QHYLQQQQQTLPPPPIQHQQ 225

>DHH1_CANAL (Q5AAW3) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)|
          Length = 549

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +3

Query: 300 GRCPRRQYQNLPDQRQHQALSPRAQHP-RQRQCPQIQH 410
           G   ++Q Q  P Q+Q Q+ SP  Q P +Q+Q P  QH
Sbjct: 444 GSSSQQQQQPPPQQQQQQSTSPPQQQPQQQQQQPNPQH 481

>HOG3_HORVU (P80198) Gamma-hordein-3|
          Length = 289

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 19/51 (37%), Positives = 24/51 (47%)
 Frame = +3

Query: 318 QYQNLPDQRQHQALSPRAQHPRQRQCPQIQHLNQLVKRRHQVHPSCCQLPQ 470
           Q+Q LP Q       P   +P+Q+  PQ Q   Q  +  HQ H    QLPQ
Sbjct: 24  QWQPLPQQPPFLQQEPEQPYPQQQPLPQQQPFPQQPQLPHQ-HQFPQQLPQ 73

>VEIN_DROME (Q94918) Protein vein precursor (Epidermal growth factor-like|
           protein) (Protein defective dorsal discs)
          Length = 623

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 25/75 (33%), Positives = 30/75 (40%), Gaps = 7/75 (9%)
 Frame = +3

Query: 237 SYEICPSALSQSSP*TSQLYQGRCPRRQYQNLPDQRQHQALSPRAQ-------HPRQRQC 395
           SYE+  S L   SP      Q    RR   N    RQ Q    R Q       H RQRQ 
Sbjct: 225 SYEMPESMLEDRSP-----EQAARSRRDGSNTNGSRQQQRTGHRQQLQQDKRDHRRQRQD 279

Query: 396 PQIQHLNQLVKRRHQ 440
            Q +   Q  +R+H+
Sbjct: 280 QQKEQRQQQQQRQHK 294

>MAML3_HUMAN (Q96JK9) Mastermind-like protein 3 (Mam-3)|
          Length = 1133

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 19/52 (36%), Positives = 25/52 (48%)
 Frame = +3

Query: 264 SQSSP*TSQLYQGRCPRRQYQNLPDQRQHQALSPRAQHPRQRQCPQIQHLNQ 419
           S  SP   QL Q    ++Q   L  Q+Q Q    + Q  +Q+Q  Q QH NQ
Sbjct: 460 SDMSP-AEQLKQMAAQQQQRAKLMQQKQQQQQQQQQQQQQQQQQQQQQHSNQ 510

>MUC13_MOUSE (P19467) Mucin-13 precursor (Cell surface antigen 114/A10)|
           (Lymphocyte antigen 64)
          Length = 573

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 20/78 (25%), Positives = 39/78 (50%)
 Frame = +1

Query: 178 LYIKLCRRLVRLGNSGAATTLTRYAQVPCHSPPHELPSFTKAAAHGANTRTYQTSASTKP 357
           L + L   LV +G+S  A++ T  +     SPP  + S +  ++  A+T T  +  ++ P
Sbjct: 5   LLLSLSLLLVTVGSSSQASSTTSSSGGT--SPPTTVQSQSPGSSSQASTTTSSSGGASPP 62

Query: 358 *AHEPNTPGNASAHKSNT 411
              +  +PG++S   + T
Sbjct: 63  TTVQSQSPGSSSQASTTT 80

>IF38_ARATH (O49160) Eukaryotic translation initiation factor 3 subunit 8 (eIF3|
           p110) (eIF3c) (p105)
          Length = 900

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
 Frame = +3

Query: 261 LSQSSP*TSQLYQGRCPRRQY-QNLPDQRQHQALSPRAQHPRQRQCPQIQHLNQLVKRRH 437
           +++S    S+LY G+  R    Q +   R H+    + +  R+RQ P   HLN  ++   
Sbjct: 557 ITESHSCLSELYSGQRVRELLAQGVSQSRYHEKTPEQERMERRRQMPYHMHLN--LELLE 614

Query: 438 QVHPSCCQL 464
            VH  C  L
Sbjct: 615 AVHLICAML 623

>SN_MOUSE (Q62230) Sialoadhesin precursor (Sialic acid-binding Ig-like|
           lectin-1) (Siglec-1) (Sheep erythrocyte receptor) (SER)
           (CD169 antigen)
          Length = 1694

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 21/65 (32%), Positives = 28/65 (43%)
 Frame = +1

Query: 109 QHTGMQTVSNSQLTESKDDTLLSLYIKLCRRLVRLGNSGAATTLTRYAQVPCHSPPHELP 288
           Q T +   SNS   E +   L    + LC     LGNS AA +    A V   +P + L 
Sbjct: 657 QRTKVSRTSNSLHVEIQKPVLEDEGVYLCEASNTLGNSSAAASFNAKATVLVITPSNTLR 716

Query: 289 SFTKA 303
             T+A
Sbjct: 717 EGTEA 721

>GDBB_WHEAT (P06659) Gamma-gliadin B precursor|
          Length = 291

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 19/55 (34%), Positives = 24/55 (43%)
 Frame = +3

Query: 309 PRRQYQNLPDQRQHQALSPRAQHPRQRQCPQIQHLNQLVKRRHQVHPSCCQLPQP 473
           P++Q+   P Q Q Q L PR   P+Q Q P  Q   Q   +  Q      Q  QP
Sbjct: 63  PQQQFPQ-PQQPQQQFLQPRQPFPQQPQQPYPQQPQQPFPQTQQPQQPFPQSKQP 116

>DEF13_MOUSE (P50711) Defensin-related cryptdin 13 precursor|
          Length = 93

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = +3

Query: 345 QHQALSPRAQHPRQRQCPQIQHLNQLVKRRHQVHPSCCQ 461
           Q ++L     + R+R C + +H+N   +R H ++  CC+
Sbjct: 55  QEESLRDLVCYCRKRGCKRREHMNGTCRRGHLMYTLCCR 93

>KAPC_DICDI (P34099) cAMP-dependent protein kinase catalytic subunit (EC|
           2.7.11.11)
          Length = 648

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 312 RRQYQNLPDQRQHQALSPRAQHPRQRQCPQIQHLNQ 419
           ++Q Q  P Q+Q Q   P+ Q P+Q+Q  Q Q   Q
Sbjct: 136 QQQPQQQPQQQQPQQQQPQQQQPQQQQQQQPQQQQQ 171

>RTEL1_HUMAN (Q9NZ71) Regulator of telomere elongation helicase 1 (EC 3.6.1.-)|
            (Helicase-like protein NHL)
          Length = 1400

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 415  FRCWICGHWRCRGCWARGLRA 353
            F+C  C   RC+ CW R L+A
Sbjct: 1255 FQCPACDFQRCQACWQRHLQA 1275

>MCH1_ASPFU (Q4WVT3) Probable transporter mch1|
          Length = 619

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 8/38 (21%)
 Frame = -3

Query: 400 CGHWRCRGCWARG--------LRAWCWRWSGRFWYWRR 311
           C  WRC G WA G        + AW   W G    WRR
Sbjct: 581 CHGWRCYGFWAVGCTLSVWVAVVAWILAWRG----WRR 614

>HR4_DROME (Q9W539) Hormone receptor 4 (dHR4)|
          Length = 1518

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 19/57 (33%), Positives = 27/57 (47%)
 Frame = +3

Query: 282  TSQLYQGRCPRRQYQNLPDQRQHQALSPRAQHPRQRQCPQIQHLNQLVKRRHQVHPS 452
            T+Q  Q +  ++Q Q    Q+QHQ      QH + +Q  Q Q  + L    HQ H S
Sbjct: 1019 TNQKQQQQAAQQQQQQAAAQQQHQQQQ---QHQQHQQHQQQQLHSPLHHHHHQGHQS 1072



 Score = 28.5 bits (62), Expect = 9.2
 Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
 Frame = +3

Query: 348 HQALSPRAQHPRQRQCPQIQ-----HLNQLVKRRHQVHPSCCQLPQP 473
           HQ  SP  QH +Q+Q  Q Q     H  Q  ++ HQ  P    L  P
Sbjct: 547 HQQQSPLLQHHQQQQQQQQQQQQHLHQQQQQQQHHQQQPQALALMHP 593

>VID21_NEUCR (Q7SBU6) Chromatin modification-related protein vid-21|
          Length = 2189

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 10/72 (13%)
 Frame = +3

Query: 288  QLYQGRCPRRQYQNLPDQRQHQ--------ALSPRAQH-PRQRQCP-QIQHLNQLVKRRH 437
            QL Q +  + Q+Q  P Q Q Q        +   + QH P+Q+Q P Q Q L Q   ++ 
Sbjct: 1323 QLQQQQHQQHQHQQHPQQPQQQGQVQQQVVSQQQQQQHQPQQQQQPQQQQQLQQQQPQQQ 1382

Query: 438  QVHPSCCQLPQP 473
            Q      Q PQP
Sbjct: 1383 QPQHQQVQTPQP 1394

>MUC1_HUMAN (P15941) Mucin-1 precursor (MUC-1) (Polymorphic epithelial mucin)|
            (PEM) (PEMT) (Episialin) (Tumor-associated mucin)
            (Carcinoma-associated mucin) (Tumor-associated epithelial
            membrane antigen) (EMA) (H23AG) (Peanut-reactive urinary
            mucin) (PUM)
          Length = 1255

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 21/64 (32%), Positives = 24/64 (37%)
 Frame = +1

Query: 202  LVRLGNSGAATTLTRYAQVPCHSPPHELPSFTKAAAHGANTRTYQTSASTKP*AHEPNTP 381
            LV  G S  ATT       P   P H   + T  A+H   T    T  S+ P    P T 
Sbjct: 972  LVHNGTSARATTTPASKSTPFSIPSHHSDTPTTLASHSTKTDASSTHHSSVP----PLTS 1027

Query: 382  GNAS 393
             N S
Sbjct: 1028 SNHS 1031

>OAF_DROME (Q9NLA6) Out at first protein [Contains: Out at first short|
           protein]
          Length = 487

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +3

Query: 330 LPDQRQHQALSPRAQHPRQRQCP-QIQHLNQLVKRRHQVHPSCC 458
           L ++  HQ++   A   RQ Q   ++ HL  L + R   H +CC
Sbjct: 3   LKEEHPHQSIETAANAARQAQVRWRMAHLKALSRTRTPAHGNCC 46

>CXO1_CONIM (Q5K0B8) Conotoxin-1 precursor|
          Length = 78

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 312 RRQYQNLPDQRQHQALSPRAQHPRQRQC 395
           R   +NLP  R+H+  +P+A    +RQC
Sbjct: 26  RNGIENLPRMRRHEMKNPKASKLNKRQC 53

>PFA5_KLULA (Q6CRV3) Palmitoyltransferase PFA5 (EC 2.3.1.-) (Protein fatty|
           acyltransferase 5)
          Length = 349

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -3

Query: 181 TVRVACHLYFRLIVNYLRFAFQC 113
           T+RV  H YFRL++ +L    QC
Sbjct: 7   TLRVTSHPYFRLLIPFLTVLLQC 29

>KI67_HUMAN (P46013) Antigen KI-67|
          Length = 3256

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 12/48 (25%), Positives = 22/48 (45%)
 Frame = +1

Query: 214  GNSGAATTLTRYAQVPCHSPPHELPSFTKAAAHGANTRTYQTSASTKP 357
            G++  + T  +  ++PC SPP E+   T +      TR  +     +P
Sbjct: 2690 GHTQESLTAGKATKIPCESPPLEVVDTTASTKRHLRTRVQKVQVKEEP 2737

>ALOX_PICAN (P04841) Alcohol oxidase (EC 1.1.3.13) (AOX) (Methanol oxidase)|
           (MOX)
          Length = 664

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = +2

Query: 95  LHGRYSTLECKP*VIHN*PKVKMTRYSHCTSSYAEGWS--GWGTVELLPLLR 244
           L+GR + + C   ++     +    Y+  ++S  + W   GW T ELLPL++
Sbjct: 78  LNGRRAIVPCAN-ILGGGSSINFLMYTRASASDYDDWESEGWSTDELLPLIK 128


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,819,131
Number of Sequences: 219361
Number of extensions: 1260931
Number of successful extensions: 3981
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 3743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3960
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)