Clone Name | rbasd24a12 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome | 42 | 0.93 | 2 | emb|AL163636.7|CNS01RIK Human chromosome 14 DNA sequence BAC R-9... | 42 | 0.93 | 3 | ref|XM_691600.1| PREDICTED: Danio rerio similar to spinster-like... | 40 | 3.7 | 4 | emb|BX005059.4| Zebrafish DNA sequence from clone CH211-138A6, c... | 40 | 3.7 |
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 acggccacctcctggctgtcc 105 ||||||||||||||||||||| Sbjct: 2964335 acggccacctcctggctgtcc 2964315
>emb|AL163636.7|CNS01RIK Human chromosome 14 DNA sequence BAC R-903H12 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 202337 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 attttatccagattgacagaa 143 ||||||||||||||||||||| Sbjct: 128769 attttatccagattgacagaa 128789
>ref|XM_691600.1| PREDICTED: Danio rerio similar to spinster-like (LOC568280), mRNA Length = 1179 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 ctcatccatctctccgacta 26 |||||||||||||||||||| Sbjct: 198 ctcatccatctctccgacta 217
>emb|BX005059.4| Zebrafish DNA sequence from clone CH211-138A6, complete sequence Length = 194603 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 ctcatccatctctccgacta 26 |||||||||||||||||||| Sbjct: 107501 ctcatccatctctccgacta 107520 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,374,890 Number of Sequences: 3902068 Number of extensions: 2374890 Number of successful extensions: 40868 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 40858 Number of HSP's gapped (non-prelim): 10 length of query: 281 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 259 effective length of database: 17,147,199,772 effective search space: 4441124740948 effective search space used: 4441124740948 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)