ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd23l09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY108668.1| Zea mays PCO064352 mRNA sequence 238 1e-59
2dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 202 8e-49
3dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic D... 202 8e-49
4dbj|AK065464.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 8e-49
5ref|XM_473875.1| Oryza sativa (japonica cultivar-group), predic... 100 9e-18
6emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4,... 100 9e-18
7dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 100 9e-18
8emb|AJ427980.1|OSA427980 Oryza sativa HAK11 gene for putative po... 100 9e-18
9dbj|AK072123.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 9e-18
10dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
11dbj|AP003875.3| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
12emb|AJ427981.1|OSA427981 Oryza sativa HAK12 gene for putative po... 66 1e-07
13dbj|AK069377.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
14ref|NM_102850.2| Arabidopsis thaliana KUP10; potassium ion trans... 62 2e-06
15gb|AC004793.2|F28K20 Arabidopsis thaliana chromosome 1 BAC F28K2... 62 2e-06
16dbj|AK101722.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
17emb|AJ234614.1|HVU234614 Hordeum vulgare genomic DNA fragment; c... 44 0.45
18gb|CP000088.1| Thermobifida fusca YX, complete genome 42 1.8
19gb|BC031618.1| Homo sapiens chromosome 10 open reading frame 30,... 40 7.0
20gb|AC135601.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.0
21gb|AC135596.4| Oryza sativa (japonica cultivar-group) chromosome... 40 7.0
22ref|NG_000004.2| Homo sapiens cytochrome P450, family 3, subfami... 40 7.0
23gb|AC145881.4| Pan troglodytes BAC clone RP43-7E18 from chromoso... 40 7.0
24gb|AY502075.1| Rhodococcus sp. DK17 plasmid pDK2, partial sequence 40 7.0
25gb|AC005020.5| Homo sapiens BAC clone GS1-259H13 from 7, complet... 40 7.0
26gb|AC124510.4| Mus musculus BAC clone RP23-434A8 from chromosome... 40 7.0
27emb|AL590677.7| Human DNA sequence from clone RP11-214D15 on chr... 40 7.0
28emb|AJ854486.1| Human adenovirus type 9 complete genome 40 7.0
29gb|AY875648.1| Human adenovirus type 46, complete genome 40 7.0
30gb|AF091066.1|AF091066 Callitrichine herpesvirus 3 isolate Anima... 40 7.0
31gb|AF091065.1|AF091065 Callitrichine herpesvirus 3 isolate Anima... 40 7.0
32gb|AF091063.1|AF091063 Callitrichine herpesvirus 3 isolate Anima... 40 7.0
33gb|AF091062.1|AF091062 Callitrichine herpesvirus 3 isolate Anima... 40 7.0
34dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
35dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
36dbj|AP002860.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
37dbj|AB107790.2| Rhodococcus sp. RHA1 bphB1, bphS, bphT for cis-b... 40 7.0
38dbj|AK108558.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.0
39ref|XM_308969.2| Anopheles gambiae str. PEST ENSANGP00000020148 ... 40 7.0
40gb|AC147245.3| Mus musculus BAC clone RP23-462E12 from 12, compl... 40 7.0
41gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.0
42gb|AF319782.2| Callitrichine herpesvirus 3 strain CJ0149, comple... 40 7.0
43dbj|AP002909.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0 
>gb|AY108668.1| Zea mays PCO064352 mRNA sequence
          Length = 1690

 Score =  238 bits (120), Expect = 1e-59
 Identities = 198/224 (88%)
 Strand = Plus / Minus

                                                                        
Query: 77   tacacatagaacacctgcccaacattcagcaggctctcatggggaacattgaagatggcg 136
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1509 tacacatagaacacctgcccaacattcagtaggctctcatggggaacattgaagatggcg 1450

                                                                        
Query: 137  ctgttctccctgcagatcttcctcaggaaggcgtagaggtagtcgatggcgagcttcttc 196
            ||||||||||||||||||||||| ||||| || || | ||| | ||| || | |||||| 
Sbjct: 1449 ctgttctccctgcagatcttcctaaggaaagcatacaagtaattgatagcaatcttcttg 1390

                                                                        
Query: 197  agcggccccgagtccctgcgagccctgatgatggtgttcccgaggatgtgcacgaccccg 256
            |    ||| || || ||||| ||||||||||  |||||||||||||||||||| ||||||
Sbjct: 1389 atgaaccctgaatctctgcgggccctgatgactgtgttcccgaggatgtgcaccaccccg 1330

                                                        
Query: 257  gcgtccctgcacgagttcaggaacgcgacctcgtcgcccacggt 300
            ||||||||||||| |||||||||||| | |||||||||||||||
Sbjct: 1329 gcgtccctgcacgcgttcaggaacgcaatctcgtcgcccacggt 1286



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 485  tactcctccatcatgctctccanccggacgaa 516
            ||||| |||||||||||||||| || ||||||
Sbjct: 1098 tactcttccatcatgctctccagcctgacgaa 1067
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  202 bits (102), Expect = 8e-49
 Identities = 189/218 (86%)
 Strand = Plus / Plus

                                                                            
Query: 77       tacacatagaacacctgcccaacattcagcaggctctcatggggaacattgaagatggcg 136
                ||||| ||||| |||||||||||||| |||| ||||||||| || |||||||||||||| 
Sbjct: 22066551 tacacgtagaaaacctgcccaacattgagcatgctctcatgaggcacattgaagatggca 22066610

                                                                            
Query: 137      ctgttctccctgcagatcttcctcaggaaggcgtagaggtagtcgatggcgagcttcttc 196
                ||||||||||||||||||||||||||||| || || | ||||| |||| | | |||||| 
Sbjct: 22066611 ctgttctccctgcagatcttcctcaggaaagcatacatgtagttgatgacaatcttcttg 22066670

                                                                            
Query: 197      agcggccccgagtccctgcgagccctgatgatggtgttcccgaggatgtgcacgaccccg 256
                |    ||| || ||||||||||| ||||| |  |||||||||||||||||||| ||||||
Sbjct: 22066671 acgaaccctgaatccctgcgagctctgatcaccgtgttcccgaggatgtgcaccaccccg 22066730

                                                      
Query: 257      gcgtccctgcacgagttcaggaacgcgacctcgtcgcc 294
                ||||||||||||| |||||||||||||| |||||||||
Sbjct: 22066731 gcgtccctgcacgcgttcaggaacgcgatctcgtcgcc 22066768



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                                 
Query: 458      agggcgctgtagtcgtcggagtccgaatactcctccatcatgctctcca 506
                |||| |||||| |||||||||||    ||||||||||||||||||||||
Sbjct: 22066959 agggtgctgtactcgtcggagtcgctgtactcctccatcatgctctcca 22067007
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>dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0635G10
          Length = 146728

 Score =  202 bits (102), Expect = 8e-49
 Identities = 189/218 (86%)
 Strand = Plus / Plus

                                                                          
Query: 77     tacacatagaacacctgcccaacattcagcaggctctcatggggaacattgaagatggcg 136
              ||||| ||||| |||||||||||||| |||| ||||||||| || |||||||||||||| 
Sbjct: 108615 tacacgtagaaaacctgcccaacattgagcatgctctcatgaggcacattgaagatggca 108674

                                                                          
Query: 137    ctgttctccctgcagatcttcctcaggaaggcgtagaggtagtcgatggcgagcttcttc 196
              ||||||||||||||||||||||||||||| || || | ||||| |||| | | |||||| 
Sbjct: 108675 ctgttctccctgcagatcttcctcaggaaagcatacatgtagttgatgacaatcttcttg 108734

                                                                          
Query: 197    agcggccccgagtccctgcgagccctgatgatggtgttcccgaggatgtgcacgaccccg 256
              |    ||| || ||||||||||| ||||| |  |||||||||||||||||||| ||||||
Sbjct: 108735 acgaaccctgaatccctgcgagctctgatcaccgtgttcccgaggatgtgcaccaccccg 108794

                                                    
Query: 257    gcgtccctgcacgagttcaggaacgcgacctcgtcgcc 294
              ||||||||||||| |||||||||||||| |||||||||
Sbjct: 108795 gcgtccctgcacgcgttcaggaacgcgatctcgtcgcc 108832



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                               
Query: 458    agggcgctgtagtcgtcggagtccgaatactcctccatcatgctctcca 506
              |||| |||||| |||||||||||    ||||||||||||||||||||||
Sbjct: 109023 agggtgctgtactcgtcggagtcgctgtactcctccatcatgctctcca 109071
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>dbj|AK065464.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013020H24, full
            insert sequence
          Length = 2893

 Score =  202 bits (102), Expect = 8e-49
 Identities = 189/218 (86%)
 Strand = Plus / Minus

                                                                        
Query: 77   tacacatagaacacctgcccaacattcagcaggctctcatggggaacattgaagatggcg 136
            ||||| ||||| |||||||||||||| |||| ||||||||| || |||||||||||||| 
Sbjct: 2826 tacacgtagaaaacctgcccaacattgagcatgctctcatgaggcacattgaagatggca 2767

                                                                        
Query: 137  ctgttctccctgcagatcttcctcaggaaggcgtagaggtagtcgatggcgagcttcttc 196
            ||||||||||||||||||||||||||||| || || | ||||| |||| | | |||||| 
Sbjct: 2766 ctgttctccctgcagatcttcctcaggaaagcatacatgtagttgatgacaatcttcttg 2707

                                                                        
Query: 197  agcggccccgagtccctgcgagccctgatgatggtgttcccgaggatgtgcacgaccccg 256
            |    ||| || ||||||||||| ||||| |  |||||||||||||||||||| ||||||
Sbjct: 2706 acgaaccctgaatccctgcgagctctgatcaccgtgttcccgaggatgtgcaccaccccg 2647

                                                  
Query: 257  gcgtccctgcacgagttcaggaacgcgacctcgtcgcc 294
            ||||||||||||| |||||||||||||| |||||||||
Sbjct: 2646 gcgtccctgcacgcgttcaggaacgcgatctcgtcgcc 2609



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 458  agggcgctgtagtcgtcggagtccgaatactcctccatcatgctctcca 506
            |||| |||||| |||||||||||    ||||||||||||||||||||||
Sbjct: 2418 agggtgctgtactcgtcggagtcgctgtactcctccatcatgctctcca 2370
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>ref|XM_473875.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2217

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 68/74 (91%)
 Strand = Plus / Minus

                                                                        
Query: 95   ccaacattcagcaggctctcatggggaacattgaagatggcgctgttctccctgcagatc 154
            |||||||| |||| ||||||||||||||||||||||||  | ||||||||||||||||||
Sbjct: 2198 ccaacattaagcaagctctcatggggaacattgaagatcacactgttctccctgcagatc 2139

                          
Query: 155  ttcctcaggaaggc 168
            ||||||| ||||||
Sbjct: 2138 ttcctcatgaaggc 2125



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                   
Query: 226  gatggtgttcccgaggatgtgcacgaccccggcgtccctgcacgagttcaggaac 280
            ||||||||||||||||||||| ||||| ||||| ||| | |||  ||||||||||
Sbjct: 2067 gatggtgttcccgaggatgtggacgacaccggcatccttacaccggttcaggaac 2013
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>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17,
              complete sequence
          Length = 160484

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 68/74 (91%)
 Strand = Plus / Plus

                                                                          
Query: 95     ccaacattcagcaggctctcatggggaacattgaagatggcgctgttctccctgcagatc 154
              |||||||| |||| ||||||||||||||||||||||||  | ||||||||||||||||||
Sbjct: 144540 ccaacattaagcaagctctcatggggaacattgaagatcacactgttctccctgcagatc 144599

                            
Query: 155    ttcctcaggaaggc 168
              ||||||| ||||||
Sbjct: 144600 ttcctcatgaaggc 144613



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                     
Query: 226    gatggtgttcccgaggatgtgcacgaccccggcgtccctgcacgagttcaggaac 280
              ||||||||||||||||||||| ||||| ||||| ||| | |||  ||||||||||
Sbjct: 144671 gatggtgttcccgaggatgtggacgacaccggcatccttacaccggttcaggaac 144725
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 68/74 (91%)
 Strand = Plus / Plus

                                                                            
Query: 95       ccaacattcagcaggctctcatggggaacattgaagatggcgctgttctccctgcagatc 154
                |||||||| |||| ||||||||||||||||||||||||  | ||||||||||||||||||
Sbjct: 31162459 ccaacattaagcaagctctcatggggaacattgaagatcacactgttctccctgcagatc 31162518

                              
Query: 155      ttcctcaggaaggc 168
                ||||||| ||||||
Sbjct: 31162519 ttcctcatgaaggc 31162532



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                       
Query: 226      gatggtgttcccgaggatgtgcacgaccccggcgtccctgcacgagttcaggaac 280
                ||||||||||||||||||||| ||||| ||||| ||| | |||  ||||||||||
Sbjct: 31162590 gatggtgttcccgaggatgtggacgacaccggcatccttacaccggttcaggaac 31162644
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>emb|AJ427980.1|OSA427980 Oryza sativa HAK11 gene for putative potasium transporter, exons 1-9
          Length = 4562

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 68/74 (91%)
 Strand = Plus / Minus

                                                                        
Query: 95   ccaacattcagcaggctctcatggggaacattgaagatggcgctgttctccctgcagatc 154
            |||||||| |||| ||||||||||||||||||||||||  | ||||||||||||||||||
Sbjct: 4054 ccaacattaagcaagctctcatggggaacattgaagatcacactgttctccctgcagatc 3995

                          
Query: 155  ttcctcaggaaggc 168
            ||||||| ||||||
Sbjct: 3994 ttcctcatgaaggc 3981



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                   
Query: 226  gatggtgttcccgaggatgtgcacgaccccggcgtccctgcacgagttcaggaac 280
            ||||||||||||||||||||| ||||| ||||| ||| | |||  ||||||||||
Sbjct: 3923 gatggtgttcccgaggatgtggacgacaccggcatccttacaccggttcaggaac 3869
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>dbj|AK072123.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122K08, full
            insert sequence
          Length = 3453

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 68/74 (91%)
 Strand = Plus / Minus

                                                                        
Query: 95   ccaacattcagcaggctctcatggggaacattgaagatggcgctgttctccctgcagatc 154
            |||||||| |||| ||||||||||||||||||||||||  | ||||||||||||||||||
Sbjct: 3225 ccaacattaagcaagctctcatggggaacattgaagatcacactgttctccctgcagatc 3166

                          
Query: 155  ttcctcaggaaggc 168
            ||||||| ||||||
Sbjct: 3165 ttcctcatgaaggc 3152



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                   
Query: 226  gatggtgttcccgaggatgtgcacgaccccggcgtccctgcacgagttcaggaac 280
            ||||||||||||||||||||| ||||| ||||| ||| | |||  ||||||||||
Sbjct: 3094 gatggtgttcccgaggatgtggacgacaccggcatccttacaccggttcaggaac 3040
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                    
Query: 113     tcatggggaacattgaagatggcgctgttctccctgcagatcttcctcaggaa 165
               ||||||||||||||||| ||  | ||||||||||||||||||||||| |||||
Sbjct: 6204790 tcatggggaacattgaatatcacactgttctccctgcagatcttcctgaggaa 6204738



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                                
Query: 468     agtcgtcggagtccgaatactcctccatcatgctctccanccggacgaa 516
               |||| |||||||||||||| || |||||||||||||||| || ||||||
Sbjct: 6204414 agtcttcggagtccgaatagtcatccatcatgctctccagcctgacgaa 6204366



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                  
Query: 230     gtgttcccgaggatgtgcacgaccccggcgtccctgcacgagttcaggaac 280
               |||||||| |||||||||||||| || |||||| |||||  ||||||||||
Sbjct: 6204673 gtgttccccaggatgtgcacgacaccagcgtccttgcaccggttcaggaac 6204623
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>dbj|AP003875.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1119_C05
          Length = 126112

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                  
Query: 113   tcatggggaacattgaagatggcgctgttctccctgcagatcttcctcaggaa 165
             ||||||||||||||||| ||  | ||||||||||||||||||||||| |||||
Sbjct: 68183 tcatggggaacattgaatatcacactgttctccctgcagatcttcctgaggaa 68131



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                              
Query: 468   agtcgtcggagtccgaatactcctccatcatgctctccanccggacgaa 516
             |||| |||||||||||||| || |||||||||||||||| || ||||||
Sbjct: 67807 agtcttcggagtccgaatagtcatccatcatgctctccagcctgacgaa 67759



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                
Query: 230   gtgttcccgaggatgtgcacgaccccggcgtccctgcacgagttcaggaac 280
             |||||||| |||||||||||||| || |||||| |||||  ||||||||||
Sbjct: 68066 gtgttccccaggatgtgcacgacaccagcgtccttgcaccggttcaggaac 68016
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>emb|AJ427981.1|OSA427981 Oryza sativa HAK12 gene for putative potasium transporter, exons 1-9
          Length = 5418

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                 
Query: 113  tcatggggaacattgaagatggcgctgttctccctgcagatcttcctcaggaa 165
            ||||||||||||||||| ||  | ||||||||||||||||||||||| |||||
Sbjct: 4885 tcatggggaacattgaatatcacactgttctccctgcagatcttcctgaggaa 4833



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 468  agtcgtcggagtccgaatactcctccatcatgctctccanccggacgaa 516
            |||| |||||||||||||| || |||||||||||||||| || ||||||
Sbjct: 4509 agtcttcggagtccgaatagtcatccatcatgctctccagcctgacgaa 4461



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 230  gtgttcccgaggatgtgcacgaccccggcgtccctgcacgagttcaggaac 280
            |||||||| | |||||||||||| || |||||| |||||  ||||||||||
Sbjct: 4768 gtgttccccaagatgtgcacgacaccagcgtccttgcaccggttcaggaac 4718
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>dbj|AK069377.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012J20, full
            insert sequence
          Length = 3200

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                 
Query: 113  tcatggggaacattgaagatggcgctgttctccctgcagatcttcctcaggaa 165
            ||||||||||||||||| ||  | ||||||||||||||||||||||| |||||
Sbjct: 2915 tcatggggaacattgaatatcacactgttctccctgcagatcttcctgaggaa 2863



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 468  agtcgtcggagtccgaatactcctccatcatgctctccanccggacgaa 516
            |||| |||||||||||||| || |||||||||||||||| || ||||||
Sbjct: 2539 agtcttcggagtccgaatagtcatccatcatgctctccagcctgacgaa 2491



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                               
Query: 230  gtgttcccgaggatgtgcacgaccccggcgtccctgcacgagttcaggaac 280
            |||||||| |||||||||||||| || |||||| |||||  ||||||||||
Sbjct: 2798 gtgttccccaggatgtgcacgacaccagcgtccttgcaccggttcaggaac 2748
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>ref|NM_102850.2| Arabidopsis thaliana KUP10; potassium ion transporter AT1G31120
            (KUP10) mRNA, complete cds
          Length = 3135

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                        
Query: 77   tacacatagaacacctgcccaacattcagcaggctctcatggggaacattgaagatggcg 136
            ||||||||||| | ||| |||||||| |  |||||||| || ||||||||||||||||| 
Sbjct: 3060 tacacatagaaaatctggccaacatttaaaaggctctcctgaggaacattgaagatggca 3001

                                   
Query: 137  ctgttctccctgcagatcttcct 159
            ||||| || || || ||||||||
Sbjct: 3000 ctgttttctctacaaatcttcct 2978
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>gb|AC004793.2|F28K20 Arabidopsis thaliana chromosome 1 BAC F28K20 sequence, complete
             sequence
          Length = 76458

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 70/83 (84%)
 Strand = Plus / Plus

                                                                         
Query: 77    tacacatagaacacctgcccaacattcagcaggctctcatggggaacattgaagatggcg 136
             ||||||||||| | ||| |||||||| |  |||||||| || ||||||||||||||||| 
Sbjct: 15515 tacacatagaaaatctggccaacatttaaaaggctctcctgaggaacattgaagatggca 15574

                                    
Query: 137   ctgttctccctgcagatcttcct 159
             ||||| || || || ||||||||
Sbjct: 15575 ctgttttctctacaaatcttcct 15597
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>dbj|AK101722.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061B08, full
            insert sequence
          Length = 2930

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 153  tcttcctcaggaaggcgtagaggtagt 179
            ||||||||||||||||||||| |||||
Sbjct: 2582 tcttcctcaggaaggcgtagatgtagt 2556
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>emb|AJ234614.1|HVU234614 Hordeum vulgare genomic DNA fragment; clone MWG0882.uni
          Length = 351

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 92  tgcccaacattcagcaggctctcatggggaacattgaa 129
           ||||||||||| || ||||||||||| |||| ||||||
Sbjct: 54  tgcccaacattaagtaggctctcatgaggaatattgaa 17
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 387     gggaggcgtagctgaggtcgg 407
               |||||||||||||||||||||
Sbjct: 2492733 gggaggcgtagctgaggtcgg 2492713
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>gb|BC031618.1| Homo sapiens chromosome 10 open reading frame 30, mRNA (cDNA clone
           MGC:35247 IMAGE:5172600), complete cds
          Length = 1646

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 97  aacattcagcaggctctcatgggg 120
           ||||||||| ||||||||||||||
Sbjct: 404 aacattcagaaggctctcatgggg 427
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>gb|AC135601.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0051D22, complete sequence
          Length = 119919

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 444   gctcctgctggtcgagggcg 463
             ||||||||||||||||||||
Sbjct: 86037 gctcctgctggtcgagggcg 86056
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>gb|AC135596.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032D10
              map E20933S, complete sequence
          Length = 146118

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 444    gctcctgctggtcgagggcg 463
              ||||||||||||||||||||
Sbjct: 138735 gctcctgctggtcgagggcg 138716
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>ref|NG_000004.2| Homo sapiens cytochrome P450, family 3, subfamily A (CYP3A) on chromosome
              7
          Length = 428605

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 193    cttcagcggccccgagtccctgcg 216
              |||||||||||||||| |||||||
Sbjct: 315903 cttcagcggccccgaggccctgcg 315880
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>gb|AC145881.4| Pan troglodytes BAC clone RP43-7E18 from chromosome 7, complete
             sequence
          Length = 199758

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 193   cttcagcggccccgagtccctgcg 216
             |||||||||||||||| |||||||
Sbjct: 81775 cttcagcggccccgaggccctgcg 81752
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>gb|AY502075.1| Rhodococcus sp. DK17 plasmid pDK2, partial sequence
          Length = 37218

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 435   cgtcgatcagctcctgctgg 454
             ||||||||||||||||||||
Sbjct: 15454 cgtcgatcagctcctgctgg 15435
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>gb|AC005020.5| Homo sapiens BAC clone GS1-259H13 from 7, complete sequence
          Length = 177531

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 193   cttcagcggccccgagtccctgcg 216
             |||||||||||||||| |||||||
Sbjct: 78629 cttcagcggccccgaggccctgcg 78606
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>gb|AC124510.4| Mus musculus BAC clone RP23-434A8 from chromosome 12, complete sequence
          Length = 194104

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 98     acattcagcaggctctcatg 117
              ||||||||||||||||||||
Sbjct: 174466 acattcagcaggctctcatg 174447
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>emb|AL590677.7| Human DNA sequence from clone RP11-214D15 on chromosome 10 Contains the
             5' end of the gene for a novel protein (FLJ40283), a novel
             gene and two CpG islands, complete sequence
          Length = 127714

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 97    aacattcagcaggctctcatgggg 120
             ||||||||| ||||||||||||||
Sbjct: 51834 aacattcagaaggctctcatgggg 51811
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>emb|AJ854486.1| Human adenovirus type 9 complete genome
          Length = 35083

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 189   gcttcttcagcggccccgagtccctgcg 216
             |||||||||||| ||||||| |||||||
Sbjct: 23726 gcttcttcagcgaccccgagaccctgcg 23753
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>gb|AY875648.1| Human adenovirus type 46, complete genome
          Length = 35178

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 189   gcttcttcagcggccccgagtccctgcg 216
             |||||||||||| ||||||| |||||||
Sbjct: 23705 gcttcttcagcgaccccgagaccctgcg 23732
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>gb|AF091066.1|AF091066 Callitrichine herpesvirus 3 isolate Animal Cj0159 terminase gene,
           partial cds
          Length = 378

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 96  caacattcagcaggctctcatggg 119
           ||||||||||||||| ||||||||
Sbjct: 73  caacattcagcaggcgctcatggg 50
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>gb|AF091065.1|AF091065 Callitrichine herpesvirus 3 isolate Animal Cj021 terminase gene,
           partial cds
          Length = 378

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 96  caacattcagcaggctctcatggg 119
           ||||||||||||||| ||||||||
Sbjct: 73  caacattcagcaggcgctcatggg 50
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>gb|AF091063.1|AF091063 Callitrichine herpesvirus 3 isolate Animal Cj0132 terminase gene,
           partial cds
          Length = 378

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 96  caacattcagcaggctctcatggg 119
           ||||||||||||||| ||||||||
Sbjct: 73  caacattcagcaggcgctcatggg 50
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>gb|AF091062.1|AF091062 Callitrichine herpesvirus 3 isolate Animal Cj0222 terminase gene,
           partial cds
          Length = 378

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 96  caacattcagcaggctctcatggg 119
           ||||||||||||||| ||||||||
Sbjct: 73  caacattcagcaggcgctcatggg 50
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 444      gctcctgctggtcgagggcg 463
                ||||||||||||||||||||
Sbjct: 10514889 gctcctgctggtcgagggcg 10514870
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 404     tcggcggcggacctggcgtc 423
               ||||||||||||||||||||
Sbjct: 1446246 tcggcggcggacctggcgtc 1446227
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>dbj|AP002860.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0409B08
          Length = 134673

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 404   tcggcggcggacctggcgtc 423
             ||||||||||||||||||||
Sbjct: 11894 tcggcggcggacctggcgtc 11875
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>dbj|AB107790.2| Rhodococcus sp. RHA1 bphB1, bphS, bphT for
            cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase, sensor
            kinase, response regulator, partial and complete cds
          Length = 8801

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 435  cgtcgatcagctcctgctgg 454
            ||||||||||||||||||||
Sbjct: 3228 cgtcgatcagctcctgctgg 3247
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>dbj|AK108558.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-A01, full
           insert sequence
          Length = 1199

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 444 gctcctgctggtcgagggcg 463
           ||||||||||||||||||||
Sbjct: 94  gctcctgctggtcgagggcg 113
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>ref|XM_308969.2| Anopheles gambiae str. PEST ENSANGP00000020148 (ENSANGG00000017659),
            partial mRNA
          Length = 1461

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 436  gtcgatcagctcctgctggt 455
            ||||||||||||||||||||
Sbjct: 1155 gtcgatcagctcctgctggt 1136
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>gb|AC147245.3| Mus musculus BAC clone RP23-462E12 from 12, complete sequence
          Length = 179735

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 98     acattcagcaggctctcatg 117
              ||||||||||||||||||||
Sbjct: 176703 acattcagcaggctctcatg 176722
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 444      gctcctgctggtcgagggcg 463
                ||||||||||||||||||||
Sbjct: 10586433 gctcctgctggtcgagggcg 10586414
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>gb|AF319782.2| Callitrichine herpesvirus 3 strain CJ0149, complete genome
          Length = 149696

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 96    caacattcagcaggctctcatggg 119
             ||||||||||||||| ||||||||
Sbjct: 45995 caacattcagcaggcgctcatggg 46018
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>dbj|AP002909.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0044F08
          Length = 141528

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 404   tcggcggcggacctggcgtc 423
             ||||||||||||||||||||
Sbjct: 95867 tcggcggcggacctggcgtc 95848


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,376,583
Number of Sequences: 3902068
Number of extensions: 3376583
Number of successful extensions: 73202
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72945
Number of HSP's gapped (non-prelim): 254
length of query: 518
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 495
effective length of database: 17,143,297,704
effective search space: 8485932363480
effective search space used: 8485932363480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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