ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd23l08 |
|---|---|
| Clone Library Name | barley_pub |
>HAK11_ORYSA (Q7XLC6) Probable potassium transporter 11 (OsHAK11)| Length = 791 Score = 138 bits (347), Expect = 4e-33 Identities = 68/106 (64%), Positives = 87/106 (82%) Frame = -2 Query: 401 YASRDSIVPVRSPNLPGSMSSAQTTTATLGFETVGDEVAFLNSCRDAGVVHILGNTIIRA 222 Y+S+DSIVPV+SP L G+ ++ A+ TV DE+ FLN C+DAGVVHILGNTI+ A Sbjct: 690 YSSQDSIVPVQSP-LRGNSLLRYSSQAS---HTVSDELEFLNRCKDAGVVHILGNTIVLA 745 Query: 221 RRDSGPLXKLAIDYLYAFLRKICRENSAIFNVPHESLLNVGQVFYV 84 RRDSG + K+A++Y+YAF+RKICRENS IFNVPHESLLNVGQ++Y+ Sbjct: 746 RRDSGIIKKIAVNYMYAFMRKICRENSVIFNVPHESLLNVGQIYYI 791
>HAK12_ORYSA (Q8VXB1) Putative potassium transporter 12 (OsHAK12)| Length = 793 Score = 128 bits (322), Expect = 3e-30 Identities = 62/106 (58%), Positives = 83/106 (78%) Frame = -2 Query: 401 YASRDSIVPVRSPNLPGSMSSAQTTTATLGFETVGDEVAFLNSCRDAGVVHILGNTIIRA 222 Y+S+DSIVP +SP S++ + ++ T G E + FLN C+DAGVVHILGNT++ A Sbjct: 690 YSSQDSIVPAKSPIRGNSLT--RYSSQTFGDELEFLNLEFLNRCKDAGVVHILGNTVVHA 747 Query: 221 RRDSGPLXKLAIDYLYAFLRKICRENSAIFNVPHESLLNVGQVFYV 84 R DSG + K+A++Y++AFLRKICRENS IFNVPHESLLNVGQ++Y+ Sbjct: 748 RPDSGIIKKVAVNYVFAFLRKICRENSVIFNVPHESLLNVGQIYYI 793
>POT10_ARATH (Q9SA05) Putative potassium transporter 10 (AtPOT10)| Length = 787 Score = 124 bits (311), Expect = 5e-29 Identities = 62/102 (60%), Positives = 77/102 (75%) Frame = -2 Query: 389 DSIVPVRSPNLPGSMSSAQTTTATLGFETVGDEVAFLNSCRDAGVVHILGNTIIRARRDS 210 DSI V +P + ++ T T + GDEV F+N CRDAGVVHI+GNT++RARR++ Sbjct: 688 DSIESVIAPTT--TKRTSHTVTGSSQMSGGGDEVEFINGCRDAGVVHIMGNTVVRARREA 745 Query: 209 GPLXKLAIDYLYAFLRKICRENSAIFNVPHESLLNVGQVFYV 84 ++AIDY+YAFLRKICRENSAIFNVP ESLLNVGQ+FYV Sbjct: 746 RFYKRIAIDYVYAFLRKICRENSAIFNVPQESLLNVGQIFYV 787
>POT11_ARATH (O64769) Potassium transporter 11 (AtPOT11)| Length = 792 Score = 115 bits (289), Expect = 2e-26 Identities = 60/106 (56%), Positives = 77/106 (72%) Frame = -2 Query: 401 YASRDSIVPVRSPNLPGSMSSAQTTTATLGFETVGDEVAFLNSCRDAGVVHILGNTIIRA 222 + S +SI PV+ + T TA+ V DE+ F+N CRDAGVVHI+GNT++RA Sbjct: 696 FDSIESITPVKRVS--------NTVTASSQMSGV-DELEFINGCRDAGVVHIMGNTVVRA 746 Query: 221 RRDSGPLXKLAIDYLYAFLRKICRENSAIFNVPHESLLNVGQVFYV 84 RR++ K+AIDY+YAFLRKICRE+S I+NVP ESLLNVGQ+FYV Sbjct: 747 RREARFYKKIAIDYVYAFLRKICREHSVIYNVPQESLLNVGQIFYV 792
>POT9_ARATH (O49423) Putative potassium transporter 9 (AtPOT9)| Length = 807 Score = 103 bits (258), Expect = 8e-23 Identities = 55/102 (53%), Positives = 72/102 (70%) Frame = -2 Query: 389 DSIVPVRSPNLPGSMSSAQTTTATLGFETVGDEVAFLNSCRDAGVVHILGNTIIRARRDS 210 D+IV S L ++S +Q T E DE+ FL +C+++GVVHI+GNT+++AR S Sbjct: 711 DTIVSAES--LHNTVSFSQDNTVE---EEETDELEFLKTCKESGVVHIMGNTVVKARTGS 765 Query: 209 GPLXKLAIDYLYAFLRKICRENSAIFNVPHESLLNVGQVFYV 84 K+AIDY+YAFL KICR NS I +VPHE+LLNVGQVFYV Sbjct: 766 WLPKKIAIDYVYAFLAKICRANSVILHVPHETLLNVGQVFYV 807
>HAK7_ORYSA (Q8H3P9) Potassium transporter 7 (OsHAK7)| Length = 811 Score = 72.0 bits (175), Expect = 3e-13 Identities = 33/73 (45%), Positives = 51/73 (69%) Frame = -2 Query: 302 VGDEVAFLNSCRDAGVVHILGNTIIRARRDSGPLXKLAIDYLYAFLRKICRENSAIFNVP 123 V DE+A L ++AGV +I+G++ ++AR++S L AIDY Y+FLRK CR + ++P Sbjct: 739 VRDELADLLDAKEAGVTYIIGHSYVKARKNSNFLKTFAIDYAYSFLRKNCRGPAVALHIP 798 Query: 122 HESLLNVGQVFYV 84 H SL+ VG ++YV Sbjct: 799 HISLVEVGMIYYV 811
>HAK3_ORYSA (Q5ZC87) Probable potassium transporter 3 (OsHAK3)| Length = 808 Score = 68.9 bits (167), Expect = 3e-12 Identities = 31/73 (42%), Positives = 48/73 (65%) Frame = -2 Query: 302 VGDEVAFLNSCRDAGVVHILGNTIIRARRDSGPLXKLAIDYLYAFLRKICRENSAIFNVP 123 V +E++ L + AGV +I+G++ I+AR+ S K A++ YAFLRK CR + N+P Sbjct: 736 VKEELSALVEAKHAGVAYIMGHSYIKARKSSSVFKKFAVNVAYAFLRKNCRGPGLVLNIP 795 Query: 122 HESLLNVGQVFYV 84 H SL+ VG ++YV Sbjct: 796 HISLIEVGMIYYV 808
>POT4_ARATH (Q9LD18) Potassium transporter 4 (AtPOT4) (AtKUP3) (AtKT4)| Length = 789 Score = 68.6 bits (166), Expect = 3e-12 Identities = 34/85 (40%), Positives = 56/85 (65%), Gaps = 1/85 (1%) Frame = -2 Query: 335 QTTTATLGF-ETVGDEVAFLNSCRDAGVVHILGNTIIRARRDSGPLXKLAIDYLYAFLRK 159 Q T ++ G +V +E+ L ++AGV +I+G++ +++R+ S L K+AID Y+FLRK Sbjct: 705 QLTASSGGMGSSVREELMDLIRAKEAGVAYIMGHSYVKSRKSSSWLKKMAIDIGYSFLRK 764 Query: 158 ICRENSAIFNVPHESLLNVGQVFYV 84 CR + N+PH SL+ VG ++YV Sbjct: 765 NCRGPAVALNIPHISLIEVGMIYYV 789
>POT7_ARATH (Q9FY75) Potassium transporter 7 (AtPOT7) (AtHAK7)| Length = 858 Score = 66.6 bits (161), Expect = 1e-11 Identities = 31/70 (44%), Positives = 47/70 (67%) Frame = -2 Query: 293 EVAFLNSCRDAGVVHILGNTIIRARRDSGPLXKLAIDYLYAFLRKICRENSAIFNVPHES 114 E++F++ +++GVV++LG+ IRAR+DS + KL I+Y Y FLRK CR A +VP Sbjct: 789 ELSFIHKAKESGVVYLLGHGDIRARKDSWFIKKLVINYFYTFLRKNCRRGIANLSVPQSH 848 Query: 113 LLNVGQVFYV 84 L+ VG + V Sbjct: 849 LMQVGMTYMV 858
>POT13_ARATH (Q8LPL8) Potassium transporter 13 (AtPOT13) (AtKT5)| Length = 855 Score = 65.9 bits (159), Expect = 2e-11 Identities = 32/75 (42%), Positives = 50/75 (66%) Frame = -2 Query: 308 ETVGDEVAFLNSCRDAGVVHILGNTIIRARRDSGPLXKLAIDYLYAFLRKICRENSAIFN 129 +++ E++F++ +++GVV++LG+ IRA +DS L KL I+YLYAFLRK R + Sbjct: 781 QSLEKELSFIHKAKESGVVYLLGHGDIRATKDSWFLKKLVINYLYAFLRKNSRRGITNLS 840 Query: 128 VPHESLLNVGQVFYV 84 VPH L+ VG + V Sbjct: 841 VPHTHLMQVGMTYMV 855
>HAK14_ORYSA (Q69RI8) Probable potassium transporter 14 (OsHAK14)| Length = 859 Score = 65.1 bits (157), Expect = 4e-11 Identities = 34/95 (35%), Positives = 57/95 (60%), Gaps = 1/95 (1%) Frame = -2 Query: 365 PNLPGSMS-SAQTTTATLGFETVGDEVAFLNSCRDAGVVHILGNTIIRARRDSGPLXKLA 189 P + SMS A G ++ DE++F++ +++GVV++LG+ IRAR++S + KL Sbjct: 765 PTIGSSMSFDGSLDEAIDGRGSLDDELSFIHKAKESGVVYLLGHGDIRARKESFFVKKLV 824 Query: 188 IDYLYAFLRKICRENSAIFNVPHESLLNVGQVFYV 84 I+Y YAFLR+ CR A ++P ++ V + V Sbjct: 825 INYFYAFLRRNCRRGIAALSIPPSRMMQVAMQYMV 859
>POT1_ARATH (O22397) Potassium transporter 1 (AtPOT1) (AtKUP1) (AtKT1)| Length = 712 Score = 64.7 bits (156), Expect = 5e-11 Identities = 29/71 (40%), Positives = 46/71 (64%) Frame = -2 Query: 296 DEVAFLNSCRDAGVVHILGNTIIRARRDSGPLXKLAIDYLYAFLRKICRENSAIFNVPHE 117 +E + ++AGV +ILG++ +A++ S L KLA++ ++AF+ CR + NVPH Sbjct: 642 EECMEIMEAKEAGVAYILGHSYAKAKQSSSVLKKLAVNVVFAFMSTNCRGTDVVLNVPHT 701 Query: 116 SLLNVGQVFYV 84 SLL VG V+YV Sbjct: 702 SLLEVGMVYYV 712
>HAK2_ORYSA (Q942X8) Probable potassium transporter 2 (OsHAK2)| Length = 783 Score = 60.5 bits (145), Expect = 1e-09 Identities = 29/75 (38%), Positives = 45/75 (60%) Frame = -2 Query: 308 ETVGDEVAFLNSCRDAGVVHILGNTIIRARRDSGPLXKLAIDYLYAFLRKICRENSAIFN 129 + V DE+ L + GV +++G+ I+AR++S + AID Y+FLRK CR S + Sbjct: 709 QQVKDELLALVEAKHTGVTYVMGHVYIKARKNSSFFKRFAIDVGYSFLRKNCRGPSVTLH 768 Query: 128 VPHESLLNVGQVFYV 84 +PH SL+ VG + V Sbjct: 769 IPHISLIEVGMAYQV 783
>POT12_ARATH (O80739) Putative potassium transporter 12 (AtPOT12)| Length = 827 Score = 58.2 bits (139), Expect = 5e-09 Identities = 27/70 (38%), Positives = 44/70 (62%) Frame = -2 Query: 293 EVAFLNSCRDAGVVHILGNTIIRARRDSGPLXKLAIDYLYAFLRKICRENSAIFNVPHES 114 E+A L D+G+ ++L + +RA+++S + KL I+Y YAFLR+ CR +A VPH + Sbjct: 758 ELAALREATDSGLTYLLAHGDVRAKKNSIFVKKLVINYFYAFLRRNCRAGAANLTVPHMN 817 Query: 113 LLNVGQVFYV 84 +L G + V Sbjct: 818 ILQAGMTYMV 827
>HAK15_ORYSA (Q7XPL3) Probable potassium transporter 15 (OsHAK15)| Length = 867 Score = 57.8 bits (138), Expect = 6e-09 Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 7/106 (6%) Frame = -2 Query: 380 VPVRSPNLPGSMSSAQTTTATLGFETVGD-------EVAFLNSCRDAGVVHILGNTIIRA 222 VP+ + +P + + + +T + V D E+AF+ + +G V+++ N I++A Sbjct: 762 VPLLADFVPSAEVIPEASCSTPQHDPVVDYTQNLELELAFIRQAKQSGAVYLIDNPIVKA 821 Query: 221 RRDSGPLXKLAIDYLYAFLRKICRENSAIFNVPHESLLNVGQVFYV 84 R++S KL I+Y +AFLR CR ++PH +++ V YV Sbjct: 822 RKNSWFFKKLIINYFFAFLRNNCRRAMMSMSIPHTNVMQVRLTSYV 867
>POT3_ARATH (Q9FE38) Potassium transporter 3 (AtPOT3) (AtKUP4) (AtKT3) (Tiny| root hair 1 protein) Length = 775 Score = 55.8 bits (133), Expect = 2e-08 Identities = 26/73 (35%), Positives = 47/73 (64%) Frame = -2 Query: 302 VGDEVAFLNSCRDAGVVHILGNTIIRARRDSGPLXKLAIDYLYAFLRKICRENSAIFNVP 123 V +E+ L + +DA V +I+G+ ++A+R+S + +L ++ Y+FLRK CR + N+P Sbjct: 703 VKEELFDLVNAKDAEVAYIVGHGHVKAKRNSVFVKQLVVNVAYSFLRKNCRSPGVMLNIP 762 Query: 122 HESLLNVGQVFYV 84 H L+ VG +Y+ Sbjct: 763 HICLIKVGMNYYL 775
>HAK8_ORYSA (Q8VXB5) Putative potassium transporter 8 (OsHAK8)| Length = 793 Score = 55.1 bits (131), Expect = 4e-08 Identities = 29/71 (40%), Positives = 41/71 (57%) Frame = -2 Query: 302 VGDEVAFLNSCRDAGVVHILGNTIIRARRDSGPLXKLAIDYLYAFLRKICRENSAIFNVP 123 V +E+ L + RDAG ILG++ ++ + S L +LA+D Y FLR+ CR VP Sbjct: 721 VAEELEALAAARDAGTAFILGHSHVQCKPGSSLLKRLAVDVGYNFLRRNCRGPDVALRVP 780 Query: 122 HESLLNVGQVF 90 SLL VG V+ Sbjct: 781 PASLLEVGMVY 791
>POT5_ARATH (Q9M7K4) Potassium transporter 5 (AtPOT5) (AtHAK1) (AtHAK5)| Length = 785 Score = 54.3 bits (129), Expect = 7e-08 Identities = 23/73 (31%), Positives = 40/73 (54%) Frame = -2 Query: 308 ETVGDEVAFLNSCRDAGVVHILGNTIIRARRDSGPLXKLAIDYLYAFLRKICRENSAIFN 129 ++V D+ + R+ G+V+++G T I A ++S K +++ Y FL+K CRE Sbjct: 711 QSVEDQTELVEKAREKGMVYLMGETEITAEKESSLFKKFIVNHAYNFLKKNCREGDKALA 770 Query: 128 VPHESLLNVGQVF 90 +P LL VG + Sbjct: 771 IPRSKLLKVGMTY 783
>HAK10_ORYSA (Q67VS5) Potassium transporter 10 (OsHAK10)| Length = 843 Score = 53.9 bits (128), Expect = 9e-08 Identities = 26/73 (35%), Positives = 43/73 (58%) Frame = -2 Query: 302 VGDEVAFLNSCRDAGVVHILGNTIIRARRDSGPLXKLAIDYLYAFLRKICRENSAIFNVP 123 V +E+ L R+AG+ ILG++ ++A+ S +L I++ Y FLR+ R + +P Sbjct: 771 VREELQELMDAREAGMAFILGHSYVKAKSGSSFFRRLVINFCYDFLRRNSRGPNYAVTIP 830 Query: 122 HESLLNVGQVFYV 84 H S L VG ++YV Sbjct: 831 HASTLEVGMIYYV 843
>POT2_ARATH (O22881) Potassium transporter 2 (AtPOT2) (AtKUP2) (AtKT2)| Length = 794 Score = 53.1 bits (126), Expect = 2e-07 Identities = 31/90 (34%), Positives = 50/90 (55%) Frame = -2 Query: 353 GSMSSAQTTTATLGFETVGDEVAFLNSCRDAGVVHILGNTIIRARRDSGPLXKLAIDYLY 174 GS SSA+ + E+ L + ++AG ILG++ ++A++ S + +LA+++ Y Sbjct: 711 GSTSSAEADAE------LRSELRDLLAAQEAGTAFILGHSHVKAKQGSSVMKRLAVNFGY 764 Query: 173 AFLRKICRENSAIFNVPHESLLNVGQVFYV 84 FLR+ CR VP SLL VG V+ V Sbjct: 765 NFLRRNCRGPDVALKVPPVSLLEVGMVYVV 794
>HAK13_ORYSA (Q652J4) Probable potassium transporter 13 (OsHAK13)| Length = 778 Score = 52.4 bits (124), Expect = 3e-07 Identities = 24/70 (34%), Positives = 41/70 (58%) Frame = -2 Query: 293 EVAFLNSCRDAGVVHILGNTIIRARRDSGPLXKLAIDYLYAFLRKICRENSAIFNVPHES 114 EV L ++AGV +++G+T + A S + K A++ +Y FLR+ R + + +PH S Sbjct: 709 EVKELMEEKEAGVSYMIGHTCVFAHESSSAVKKFAVNVVYGFLRRNSRRPAVVLGIPHTS 768 Query: 113 LLNVGQVFYV 84 L+ VG + V Sbjct: 769 LIEVGMAYRV 778
>POT6_ARATH (Q8W4I4) Potassium transporter 6 (AtPOT6) (AtHAK6)| Length = 782 Score = 52.0 bits (123), Expect = 3e-07 Identities = 27/70 (38%), Positives = 40/70 (57%) Frame = -2 Query: 293 EVAFLNSCRDAGVVHILGNTIIRARRDSGPLXKLAIDYLYAFLRKICRENSAIFNVPHES 114 E+ L R+ GV +I+GN ++A+ SG L +LAI+ Y FLR+ R + PH S Sbjct: 713 ELMELTEAREGGVAYIMGNAYMKAKPGSGLLKRLAINIGYEFLRRNTRGPRNMLTSPHAS 772 Query: 113 LLNVGQVFYV 84 L VG ++ V Sbjct: 773 TLEVGMIYNV 782
>POT8_ARATH (Q9M7J9) Potassium transporter 8 (AtPOT8) (AtHAK8)| Length = 781 Score = 52.0 bits (123), Expect = 3e-07 Identities = 26/71 (36%), Positives = 42/71 (59%) Frame = -2 Query: 296 DEVAFLNSCRDAGVVHILGNTIIRARRDSGPLXKLAIDYLYAFLRKICRENSAIFNVPHE 117 +E+ L R+AG+ I+G++ +RA+ S + K+AI++ Y FLR+ R + PH Sbjct: 711 EELTELTEAREAGMAFIMGHSYVRAKSGSSVMKKIAINFGYDFLRRNSRGPCYGLSTPHA 770 Query: 116 SLLNVGQVFYV 84 S L VG V+ V Sbjct: 771 STLEVGMVYIV 781
>HAK9_ORYSA (Q7XIV8) Probable potassium transporter 9 (OsHAK9)| Length = 788 Score = 51.6 bits (122), Expect = 4e-07 Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 16/119 (13%) Frame = -2 Query: 398 ASRDSIVPV---RSPN----LPGSMSSAQTT--------TATLGFET-VGDEVAFLNSCR 267 AS D + V RSPN +P + ++A T A+ E V +E+ L R Sbjct: 668 ASHDGVSSVDAARSPNGIVEVPAAAAAAPVTKKVRFVVEAASPEVEKGVVEELQELCEAR 727 Query: 266 DAGVVHILGNTIIRARRDSGPLXKLAIDYLYAFLRKICRENSAIFNVPHESLLNVGQVF 90 +AG ILG++ ++ + S L KLA+ Y FLR+ CR + VP SLL VG V+ Sbjct: 728 EAGTAFILGHSHVQTKPGSSLLKKLAVGVGYNFLRRNCRGPDVVLRVPPASLLEVGMVY 786
>HAK16_ORYSA (Q84MS3) Probable potassium transporter 16 (OsHAK16)| Length = 811 Score = 48.1 bits (113), Expect = 5e-06 Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 5/96 (5%) Frame = -2 Query: 356 PGSMSS--AQTTTATLGFET---VGDEVAFLNSCRDAGVVHILGNTIIRARRDSGPLXKL 192 P MSS AQ T + E + ++ + D GVV+ILG + + A+ S L K+ Sbjct: 716 PVGMSSRLAQFQTTKMSLEEMLKIEEDQKLIQREVDNGVVYILGESEVVAKPHSNLLKKV 775 Query: 191 AIDYLYAFLRKICRENSAIFNVPHESLLNVGQVFYV 84 ++Y++ FLRK R+ + ++P LL VG + + Sbjct: 776 VVNYIFNFLRKNSRKGEKMLSIPRRKLLKVGITYEI 811
>HAK1_ORYSA (Q6VVA6) Potassium transporter 1 (OsHAK1)| Length = 801 Score = 47.4 bits (111), Expect = 8e-06 Identities = 29/112 (25%), Positives = 55/112 (49%), Gaps = 9/112 (8%) Frame = -2 Query: 392 RDSIVPVRSPNLPGSMSSAQTTTATLGFETVGDEVAFLNSCRDA---------GVVHILG 240 R + V S + SS +TT +++ + G+ A ++ + GVV+++G Sbjct: 690 RSTSSAVHSEEAIQAASSGRTTASSVQLQAGGEPPAAMDVEEEKRLIDREVGRGVVYLMG 749 Query: 239 NTIIRARRDSGPLXKLAIDYLYAFLRKICRENSAIFNVPHESLLNVGQVFYV 84 + A +S L ++A++Y+Y FLRK E +P++ LL VG + + Sbjct: 750 EANVSAGPNSSILKRIAVNYIYTFLRKNLTEGHRALAIPNDQLLKVGITYEI 801
>HAK17_ORYSA (Q67UC7) Probable potassium transporter 17 (OsHAK17)| Length = 707 Score = 42.4 bits (98), Expect = 3e-04 Identities = 24/79 (30%), Positives = 40/79 (50%) Frame = -2 Query: 320 TLGFETVGDEVAFLNSCRDAGVVHILGNTIIRARRDSGPLXKLAIDYLYAFLRKICRENS 141 T G + +E+A L + R AGVVH+ G D+G K+ + + Y FL ICR Sbjct: 630 TDGRRSPEEEMAQLEAARLAGVVHVRGKMRFYVGEDAGWFDKIMLGF-YEFLHGICRSAL 688 Query: 140 AIFNVPHESLLNVGQVFYV 84 + +P + + +G ++ V Sbjct: 689 PVLGMPLQQRVEIGMLYKV 707
>HAK4_ORYSA (Q6YSA9) Probable potassium transporter 4 (OsHAK4)| Length = 697 Score = 29.6 bits (65), Expect = 1.8 Identities = 14/64 (21%), Positives = 29/64 (45%) Frame = -2 Query: 281 LNSCRDAGVVHILGNTIIRARRDSGPLXKLAIDYLYAFLRKICRENSAIFNVPHESLLNV 102 + + R AGVVH+ G +D+ ++ + + Y L CR +P + + + Sbjct: 633 VEAARAAGVVHVRGKMRFHVGKDTRLFDRVLLGF-YELLHGACRSALPALGIPLQQRVEI 691 Query: 101 GQVF 90 G ++ Sbjct: 692 GMLY 695
>HAP1_MOUSE (O35668) Huntingtin-associated protein 1 (HAP-1)| Length = 628 Score = 29.6 bits (65), Expect = 1.8 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 2/68 (2%) Frame = +3 Query: 87 IEHLPNIQQALMGNIEDGAVLPAD--LPQEGVXVVDGELXQRPRVPASPDDGVPEDVHDP 260 ++ L N Q A + V+P D PQ+ + G L Q+PRVP + ED Sbjct: 555 LQQLSNWQDAHSKRQQKQKVVPKDSPTPQQQTNMGGGILEQQPRVPTQDSQRLEEDRATH 614 Query: 261 GVPARVQE 284 AR +E Sbjct: 615 SPSAREEE 622
>RPOB3_ENTFC (Q8GCR5) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1208 Score = 28.9 bits (63), Expect = 3.1 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = -2 Query: 272 CRDAGVVHILGNTIIRARRDSGPLXKLAI 186 C+ GVV + + IR RRD+G L K A+ Sbjct: 683 CKHDGVVEFVDASEIRVRRDNGALDKYAV 711
>RPOB2_ENTFC (Q8GCR4) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1208 Score = 28.9 bits (63), Expect = 3.1 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = -2 Query: 272 CRDAGVVHILGNTIIRARRDSGPLXKLAI 186 C+ GVV + + IR RRD+G L K A+ Sbjct: 683 CKHDGVVEFVDASEIRVRRDNGALDKYAV 711
>RNB_HHV1M (P56958) RNA-binding protein (Vmw21)| Length = 161 Score = 28.5 bits (62), Expect = 4.0 Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Frame = +3 Query: 201 QRPRVP-ASPDDGVPEDVHDPGVPARVQERDLVAHGLKPQGRRCSLRRRHGPREVRGA 371 + PRVP AS D VP D DP P +E P+ R + R PR RGA Sbjct: 104 REPRVPRASRDPRVPRDPRDPRQPRSPREPRSPREPRPPREPR-TPRTTREPRTARGA 160
>PRD16_HUMAN (Q9HAZ2) PR domain zinc finger protein 16 (PR domain-containing| protein 16) (Transcription factor MEL1) Length = 1276 Score = 28.5 bits (62), Expect = 4.0 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = -1 Query: 258 GRAHPREHHHQGSQGLGAAEXARHRLPXRLPEE 160 G PR++H G + LGA E P R+P++ Sbjct: 818 GGREPRKNHVYGERKLGAGEGLPQVCPARMPQQ 850
>AF17_HUMAN (P55198) Protein AF-17| Length = 1093 Score = 28.5 bits (62), Expect = 4.0 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +3 Query: 303 GLKPQGRRCSLRRRHGPREVRGAHRHNGVTGG 398 GLK + + S R RHGP +G+ G TGG Sbjct: 462 GLKEKKHKASKRSRHGPGRPKGSRNKEG-TGG 492
>CDTB_ECOLI (Q46669) Cytolethal distending toxin subunit B precursor (CDT B)| Length = 269 Score = 28.1 bits (61), Expect = 5.2 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Frame = -2 Query: 380 VPVR-SPNLPGSMSSAQTTTATLGFETVGDEVAFLNSCRDAGVVH 249 VPVR + + ++ QT+ TL + G+ VAF S AG+V+ Sbjct: 206 VPVRRASEIISPAAATQTSQRTLDYAVAGNSVAFRPSPLQAGIVY 250
>GLR34_ARATH (Q8GXJ4) Glutamate receptor 3.4 precursor (Ligand-gated ion channel| 3.4) (AtGLR4) Length = 959 Score = 27.7 bits (60), Expect = 6.8 Identities = 17/49 (34%), Positives = 24/49 (48%) Frame = +3 Query: 180 VVDGELXQRPRVPASPDDGVPEDVHDPGVPARVQERDLVAHGLKPQGRR 326 + GE+ + PR P++G P + GVP RV D V+ P G R Sbjct: 473 IYPGEVTKPPRGWVFPNNGKPLRI---GVPNRVSYTDYVSKDKNPPGVR 518
>RP3A_RAT (P47709) Rabphilin-3A (Exophilin-1)| Length = 684 Score = 27.7 bits (60), Expect = 6.8 Identities = 20/61 (32%), Positives = 23/61 (37%), Gaps = 2/61 (3%) Frame = +3 Query: 216 PASPDDGVPEDVHDPGVPARVQERDLVAHGLKPQGRRCSL--RRRHGPREVRGAHRHNGV 389 PA+ + PE H PAR D A G KP S R HGP R + Sbjct: 181 PATQEQPTPESRHPARAPARGDMEDRRAPGQKPGPDLTSAPGRGSHGPPTRRASEARMST 240 Query: 390 T 392 T Sbjct: 241 T 241
>ENGC_RALSO (Q8Y0V3) Probable GTPase engC (EC 3.6.1.-)| Length = 318 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%) Frame = -1 Query: 276 LVQGRRGRA-HPREHHHQGSQGLGAAEXARHRLPXR 172 + +G+ GRA H R H G GL A RH L R Sbjct: 1 MTRGKPGRAGHDRRHASTGEHGLVIAAHGRHYLVER 36
>Y133_TREPA (O83169) Hypothetical lipoprotein TP0133 precursor| Length = 409 Score = 27.3 bits (59), Expect = 8.9 Identities = 17/58 (29%), Positives = 20/58 (34%) Frame = -1 Query: 378 AGALPEPPGVHVVGADYNXXXXXXXXXXXXXXPELVQGRRGRAHPREHHHQGSQGLGA 205 A A PEP G H V L+ GR+G + GS G GA Sbjct: 258 AAAAPEPTGAHSVAHKVADAHSIAFFKNGSDEFLLIGGRQGYGEIKLERGSGSNGNGA 315
>RHSA_ECOLI (P16916) Protein rhsA precursor| Length = 1377 Score = 27.3 bits (59), Expect = 8.9 Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 12/57 (21%) Frame = +3 Query: 252 HDPGVPARVQERDLVAHGLKPQGRRCSLRRRHGPREVRG------------AHRHNG 386 HDP P + LV +G P+G + R G ++VR AHRH G Sbjct: 298 HDPEYPENLPAAPLVRYGWTPRGELAVVYDRSG-KQVRSFTYDDKYRGRMVAHRHTG 353
>COL39_CAEEL (Q09455) Cuticle collagen 39 precursor| Length = 323 Score = 27.3 bits (59), Expect = 8.9 Identities = 23/65 (35%), Positives = 27/65 (41%), Gaps = 1/65 (1%) Frame = +3 Query: 207 PRVPASPDDGVPEDVHDPGVPARVQERDLVAHGLK-PQGRRCSLRRRHGPREVRGAHRHN 383 PR PA D G P V PG P + +HGL P G GP+ GA Sbjct: 172 PRGPAG-DAGAPGQVGAPGNPGQAGRGGQRSHGLPGPSG-------APGPQGPSGAPGQP 223 Query: 384 GVTGG 398 G +GG Sbjct: 224 GQSGG 228
>RHSB_ECOLI (P16917) Protein rhsB precursor| Length = 1411 Score = 27.3 bits (59), Expect = 8.9 Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 12/57 (21%) Frame = +3 Query: 252 HDPGVPARVQERDLVAHGLKPQGRRCSLRRRHGPREVRG------------AHRHNG 386 HDP P + LV +G P+G + R G ++VR AHRH G Sbjct: 298 HDPEYPENLPAAPLVRYGWTPRGELAVVYDRSG-KQVRSFTYDDKYRGRMVAHRHTG 353 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,855,807 Number of Sequences: 219361 Number of extensions: 1020962 Number of successful extensions: 3529 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 3391 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3523 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 1359926328 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
