ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd23l08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY108668.1| Zea mays PCO064352 mRNA sequence 234 2e-58
2dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 198 1e-47
3dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic D... 198 1e-47
4dbj|AK065464.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 1e-47
5ref|XM_473875.1| Oryza sativa (japonica cultivar-group), predic... 100 7e-18
6emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4,... 100 7e-18
7dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 100 7e-18
8emb|AJ427980.1|OSA427980 Oryza sativa HAK11 gene for putative po... 100 7e-18
9dbj|AK072123.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 7e-18
10dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 66 9e-08
11dbj|AP003875.3| Oryza sativa (japonica cultivar-group) genomic D... 66 9e-08
12emb|AJ427981.1|OSA427981 Oryza sativa HAK12 gene for putative po... 66 9e-08
13dbj|AK069377.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 9e-08
14ref|NM_102850.2| Arabidopsis thaliana KUP10; potassium ion trans... 62 1e-06
15gb|AC004793.2|F28K20 Arabidopsis thaliana chromosome 1 BAC F28K2... 62 1e-06
16dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
17dbj|AP005536.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
18dbj|AP004770.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
19emb|AJ234614.1|HVU234614 Hordeum vulgare genomic DNA fragment; c... 44 0.34
20emb|AL391873.15| Human DNA sequence from clone RP11-399N11 on ch... 42 1.4
21gb|BC031618.1| Homo sapiens chromosome 10 open reading frame 30,... 40 5.4
22gb|AC124510.4| Mus musculus BAC clone RP23-434A8 from chromosome... 40 5.4
23emb|AL590677.7| Human DNA sequence from clone RP11-214D15 on chr... 40 5.4
24gb|AF091066.1|AF091066 Callitrichine herpesvirus 3 isolate Anima... 40 5.4
25gb|AF091065.1|AF091065 Callitrichine herpesvirus 3 isolate Anima... 40 5.4
26gb|AF091063.1|AF091063 Callitrichine herpesvirus 3 isolate Anima... 40 5.4
27gb|AF091062.1|AF091062 Callitrichine herpesvirus 3 isolate Anima... 40 5.4
28dbj|AK101722.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
29gb|AC147245.3| Mus musculus BAC clone RP23-462E12 from 12, compl... 40 5.4
30gb|AF319782.2| Callitrichine herpesvirus 3 strain CJ0149, comple... 40 5.4 
>gb|AY108668.1| Zea mays PCO064352 mRNA sequence
          Length = 1690

 Score =  234 bits (118), Expect = 2e-58
 Identities = 197/224 (87%)
 Strand = Plus / Minus

                                                                        
Query: 82   tacacatagaacacctgcccaacattcagcaggctctcatggggaacattgaagatggcg 141
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1509 tacacatagaacacctgcccaacattcagtaggctctcatggggaacattgaagatggcg 1450

                                                                        
Query: 142  ctgttctccctgcagatcttcctcaggaaggcgtanaggtagtcgatggcgagcttnttc 201
            ||||||||||||||||||||||| ||||| || || | ||| | ||| || | ||| || 
Sbjct: 1449 ctgttctccctgcagatcttcctaaggaaagcatacaagtaattgatagcaatcttcttg 1390

                                                                        
Query: 202  agcggccccgagtccctgcgagccctgatgatggtgttcccgaggatgtgcacgaccccg 261
            |    ||| || || ||||| ||||||||||  |||||||||||||||||||| ||||||
Sbjct: 1389 atgaaccctgaatctctgcgggccctgatgactgtgttcccgaggatgtgcaccaccccg 1330

                                                        
Query: 262  gcgtccctgcacgagttcaggaacgcgacctcgtcgcccacggt 305
            ||||||||||||| |||||||||||| | |||||||||||||||
Sbjct: 1329 gcgtccctgcacgcgttcaggaacgcaatctcgtcgcccacggt 1286
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  198 bits (100), Expect = 1e-47
 Identities = 188/218 (86%)
 Strand = Plus / Plus

                                                                            
Query: 82       tacacatagaacacctgcccaacattcagcaggctctcatggggaacattgaagatggcg 141
                ||||| ||||| |||||||||||||| |||| ||||||||| || |||||||||||||| 
Sbjct: 22066551 tacacgtagaaaacctgcccaacattgagcatgctctcatgaggcacattgaagatggca 22066610

                                                                            
Query: 142      ctgttctccctgcagatcttcctcaggaaggcgtanaggtagtcgatggcgagcttnttc 201
                ||||||||||||||||||||||||||||| || || | ||||| |||| | | ||| || 
Sbjct: 22066611 ctgttctccctgcagatcttcctcaggaaagcatacatgtagttgatgacaatcttcttg 22066670

                                                                            
Query: 202      agcggccccgagtccctgcgagccctgatgatggtgttcccgaggatgtgcacgaccccg 261
                |    ||| || ||||||||||| ||||| |  |||||||||||||||||||| ||||||
Sbjct: 22066671 acgaaccctgaatccctgcgagctctgatcaccgtgttcccgaggatgtgcaccaccccg 22066730

                                                      
Query: 262      gcgtccctgcacgagttcaggaacgcgacctcgtcgcc 299
                ||||||||||||| |||||||||||||| |||||||||
Sbjct: 22066731 gcgtccctgcacgcgttcaggaacgcgatctcgtcgcc 22066768
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>dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0635G10
          Length = 146728

 Score =  198 bits (100), Expect = 1e-47
 Identities = 188/218 (86%)
 Strand = Plus / Plus

                                                                          
Query: 82     tacacatagaacacctgcccaacattcagcaggctctcatggggaacattgaagatggcg 141
              ||||| ||||| |||||||||||||| |||| ||||||||| || |||||||||||||| 
Sbjct: 108615 tacacgtagaaaacctgcccaacattgagcatgctctcatgaggcacattgaagatggca 108674

                                                                          
Query: 142    ctgttctccctgcagatcttcctcaggaaggcgtanaggtagtcgatggcgagcttnttc 201
              ||||||||||||||||||||||||||||| || || | ||||| |||| | | ||| || 
Sbjct: 108675 ctgttctccctgcagatcttcctcaggaaagcatacatgtagttgatgacaatcttcttg 108734

                                                                          
Query: 202    agcggccccgagtccctgcgagccctgatgatggtgttcccgaggatgtgcacgaccccg 261
              |    ||| || ||||||||||| ||||| |  |||||||||||||||||||| ||||||
Sbjct: 108735 acgaaccctgaatccctgcgagctctgatcaccgtgttcccgaggatgtgcaccaccccg 108794

                                                    
Query: 262    gcgtccctgcacgagttcaggaacgcgacctcgtcgcc 299
              ||||||||||||| |||||||||||||| |||||||||
Sbjct: 108795 gcgtccctgcacgcgttcaggaacgcgatctcgtcgcc 108832
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>dbj|AK065464.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013020H24, full
            insert sequence
          Length = 2893

 Score =  198 bits (100), Expect = 1e-47
 Identities = 188/218 (86%)
 Strand = Plus / Minus

                                                                        
Query: 82   tacacatagaacacctgcccaacattcagcaggctctcatggggaacattgaagatggcg 141
            ||||| ||||| |||||||||||||| |||| ||||||||| || |||||||||||||| 
Sbjct: 2826 tacacgtagaaaacctgcccaacattgagcatgctctcatgaggcacattgaagatggca 2767

                                                                        
Query: 142  ctgttctccctgcagatcttcctcaggaaggcgtanaggtagtcgatggcgagcttnttc 201
            ||||||||||||||||||||||||||||| || || | ||||| |||| | | ||| || 
Sbjct: 2766 ctgttctccctgcagatcttcctcaggaaagcatacatgtagttgatgacaatcttcttg 2707

                                                                        
Query: 202  agcggccccgagtccctgcgagccctgatgatggtgttcccgaggatgtgcacgaccccg 261
            |    ||| || ||||||||||| ||||| |  |||||||||||||||||||| ||||||
Sbjct: 2706 acgaaccctgaatccctgcgagctctgatcaccgtgttcccgaggatgtgcaccaccccg 2647

                                                  
Query: 262  gcgtccctgcacgagttcaggaacgcgacctcgtcgcc 299
            ||||||||||||| |||||||||||||| |||||||||
Sbjct: 2646 gcgtccctgcacgcgttcaggaacgcgatctcgtcgcc 2609
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>ref|XM_473875.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2217

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 68/74 (91%)
 Strand = Plus / Minus

                                                                        
Query: 100  ccaacattcagcaggctctcatggggaacattgaagatggcgctgttctccctgcagatc 159
            |||||||| |||| ||||||||||||||||||||||||  | ||||||||||||||||||
Sbjct: 2198 ccaacattaagcaagctctcatggggaacattgaagatcacactgttctccctgcagatc 2139

                          
Query: 160  ttcctcaggaaggc 173
            ||||||| ||||||
Sbjct: 2138 ttcctcatgaaggc 2125



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                   
Query: 231  gatggtgttcccgaggatgtgcacgaccccggcgtccctgcacgagttcaggaac 285
            ||||||||||||||||||||| ||||| ||||| ||| | |||  ||||||||||
Sbjct: 2067 gatggtgttcccgaggatgtggacgacaccggcatccttacaccggttcaggaac 2013
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>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17,
              complete sequence
          Length = 160484

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 68/74 (91%)
 Strand = Plus / Plus

                                                                          
Query: 100    ccaacattcagcaggctctcatggggaacattgaagatggcgctgttctccctgcagatc 159
              |||||||| |||| ||||||||||||||||||||||||  | ||||||||||||||||||
Sbjct: 144540 ccaacattaagcaagctctcatggggaacattgaagatcacactgttctccctgcagatc 144599

                            
Query: 160    ttcctcaggaaggc 173
              ||||||| ||||||
Sbjct: 144600 ttcctcatgaaggc 144613



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                     
Query: 231    gatggtgttcccgaggatgtgcacgaccccggcgtccctgcacgagttcaggaac 285
              ||||||||||||||||||||| ||||| ||||| ||| | |||  ||||||||||
Sbjct: 144671 gatggtgttcccgaggatgtggacgacaccggcatccttacaccggttcaggaac 144725
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 68/74 (91%)
 Strand = Plus / Plus

                                                                            
Query: 100      ccaacattcagcaggctctcatggggaacattgaagatggcgctgttctccctgcagatc 159
                |||||||| |||| ||||||||||||||||||||||||  | ||||||||||||||||||
Sbjct: 31162459 ccaacattaagcaagctctcatggggaacattgaagatcacactgttctccctgcagatc 31162518

                              
Query: 160      ttcctcaggaaggc 173
                ||||||| ||||||
Sbjct: 31162519 ttcctcatgaaggc 31162532



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                       
Query: 231      gatggtgttcccgaggatgtgcacgaccccggcgtccctgcacgagttcaggaac 285
                ||||||||||||||||||||| ||||| ||||| ||| | |||  ||||||||||
Sbjct: 31162590 gatggtgttcccgaggatgtggacgacaccggcatccttacaccggttcaggaac 31162644
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>emb|AJ427980.1|OSA427980 Oryza sativa HAK11 gene for putative potasium transporter, exons 1-9
          Length = 4562

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 68/74 (91%)
 Strand = Plus / Minus

                                                                        
Query: 100  ccaacattcagcaggctctcatggggaacattgaagatggcgctgttctccctgcagatc 159
            |||||||| |||| ||||||||||||||||||||||||  | ||||||||||||||||||
Sbjct: 4054 ccaacattaagcaagctctcatggggaacattgaagatcacactgttctccctgcagatc 3995

                          
Query: 160  ttcctcaggaaggc 173
            ||||||| ||||||
Sbjct: 3994 ttcctcatgaaggc 3981



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                   
Query: 231  gatggtgttcccgaggatgtgcacgaccccggcgtccctgcacgagttcaggaac 285
            ||||||||||||||||||||| ||||| ||||| ||| | |||  ||||||||||
Sbjct: 3923 gatggtgttcccgaggatgtggacgacaccggcatccttacaccggttcaggaac 3869
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>dbj|AK072123.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122K08, full
            insert sequence
          Length = 3453

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 68/74 (91%)
 Strand = Plus / Minus

                                                                        
Query: 100  ccaacattcagcaggctctcatggggaacattgaagatggcgctgttctccctgcagatc 159
            |||||||| |||| ||||||||||||||||||||||||  | ||||||||||||||||||
Sbjct: 3225 ccaacattaagcaagctctcatggggaacattgaagatcacactgttctccctgcagatc 3166

                          
Query: 160  ttcctcaggaaggc 173
            ||||||| ||||||
Sbjct: 3165 ttcctcatgaaggc 3152



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                   
Query: 231  gatggtgttcccgaggatgtgcacgaccccggcgtccctgcacgagttcaggaac 285
            ||||||||||||||||||||| ||||| ||||| ||| | |||  ||||||||||
Sbjct: 3094 gatggtgttcccgaggatgtggacgacaccggcatccttacaccggttcaggaac 3040
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                    
Query: 118     tcatggggaacattgaagatggcgctgttctccctgcagatcttcctcaggaa 170
               ||||||||||||||||| ||  | ||||||||||||||||||||||| |||||
Sbjct: 6204790 tcatggggaacattgaatatcacactgttctccctgcagatcttcctgaggaa 6204738



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                  
Query: 235     gtgttcccgaggatgtgcacgaccccggcgtccctgcacgagttcaggaac 285
               |||||||| |||||||||||||| || |||||| |||||  ||||||||||
Sbjct: 6204673 gtgttccccaggatgtgcacgacaccagcgtccttgcaccggttcaggaac 6204623
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>dbj|AP003875.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1119_C05
          Length = 126112

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                  
Query: 118   tcatggggaacattgaagatggcgctgttctccctgcagatcttcctcaggaa 170
             ||||||||||||||||| ||  | ||||||||||||||||||||||| |||||
Sbjct: 68183 tcatggggaacattgaatatcacactgttctccctgcagatcttcctgaggaa 68131



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                
Query: 235   gtgttcccgaggatgtgcacgaccccggcgtccctgcacgagttcaggaac 285
             |||||||| |||||||||||||| || |||||| |||||  ||||||||||
Sbjct: 68066 gtgttccccaggatgtgcacgacaccagcgtccttgcaccggttcaggaac 68016
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>emb|AJ427981.1|OSA427981 Oryza sativa HAK12 gene for putative potasium transporter, exons 1-9
          Length = 5418

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                 
Query: 118  tcatggggaacattgaagatggcgctgttctccctgcagatcttcctcaggaa 170
            ||||||||||||||||| ||  | ||||||||||||||||||||||| |||||
Sbjct: 4885 tcatggggaacattgaatatcacactgttctccctgcagatcttcctgaggaa 4833



 Score = 46.1 bits (23), Expect = 0.087
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 235  gtgttcccgaggatgtgcacgaccccggcgtccctgcacgagttcaggaac 285
            |||||||| | |||||||||||| || |||||| |||||  ||||||||||
Sbjct: 4768 gtgttccccaagatgtgcacgacaccagcgtccttgcaccggttcaggaac 4718
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>dbj|AK069377.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012J20, full
            insert sequence
          Length = 3200

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                 
Query: 118  tcatggggaacattgaagatggcgctgttctccctgcagatcttcctcaggaa 170
            ||||||||||||||||| ||  | ||||||||||||||||||||||| |||||
Sbjct: 2915 tcatggggaacattgaatatcacactgttctccctgcagatcttcctgaggaa 2863



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                               
Query: 235  gtgttcccgaggatgtgcacgaccccggcgtccctgcacgagttcaggaac 285
            |||||||| |||||||||||||| || |||||| |||||  ||||||||||
Sbjct: 2798 gtgttccccaggatgtgcacgacaccagcgtccttgcaccggttcaggaac 2748
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>ref|NM_102850.2| Arabidopsis thaliana KUP10; potassium ion transporter AT1G31120
            (KUP10) mRNA, complete cds
          Length = 3135

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                        
Query: 82   tacacatagaacacctgcccaacattcagcaggctctcatggggaacattgaagatggcg 141
            ||||||||||| | ||| |||||||| |  |||||||| || ||||||||||||||||| 
Sbjct: 3060 tacacatagaaaatctggccaacatttaaaaggctctcctgaggaacattgaagatggca 3001

                                   
Query: 142  ctgttctccctgcagatcttcct 164
            ||||| || || || ||||||||
Sbjct: 3000 ctgttttctctacaaatcttcct 2978
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>gb|AC004793.2|F28K20 Arabidopsis thaliana chromosome 1 BAC F28K20 sequence, complete
             sequence
          Length = 76458

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 70/83 (84%)
 Strand = Plus / Plus

                                                                         
Query: 82    tacacatagaacacctgcccaacattcagcaggctctcatggggaacattgaagatggcg 141
             ||||||||||| | ||| |||||||| |  |||||||| || ||||||||||||||||| 
Sbjct: 15515 tacacatagaaaatctggccaacatttaaaaggctctcctgaggaacattgaagatggca 15574

                                    
Query: 142   ctgttctccctgcagatcttcct 164
             ||||| || || || ||||||||
Sbjct: 15575 ctgttttctctacaaatcttcct 15597
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 37       taaaataatctacacacaaaca 58
                ||||||||||||||||||||||
Sbjct: 10187083 taaaataatctacacacaaaca 10187104
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>dbj|AP005536.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0055M07
          Length = 150901

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 37    taaaataatctacacacaaaca 58
             ||||||||||||||||||||||
Sbjct: 59449 taaaataatctacacacaaaca 59470
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>dbj|AP004770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0017G06
          Length = 150628

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 37     taaaataatctacacacaaaca 58
              ||||||||||||||||||||||
Sbjct: 134777 taaaataatctacacacaaaca 134798
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>emb|AJ234614.1|HVU234614 Hordeum vulgare genomic DNA fragment; clone MWG0882.uni
          Length = 351

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 97  tgcccaacattcagcaggctctcatggggaacattgaa 134
           ||||||||||| || ||||||||||| |||| ||||||
Sbjct: 54  tgcccaacattaagtaggctctcatgaggaatattgaa 17
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>emb|AL391873.15| Human DNA sequence from clone RP11-399N11 on chromosome 13, complete
             sequence
          Length = 161317

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 37    taaaataatctacacacaaac 57
             |||||||||||||||||||||
Sbjct: 33273 taaaataatctacacacaaac 33293
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>gb|BC031618.1| Homo sapiens chromosome 10 open reading frame 30, mRNA (cDNA clone
           MGC:35247 IMAGE:5172600), complete cds
          Length = 1646

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 102 aacattcagcaggctctcatgggg 125
           ||||||||| ||||||||||||||
Sbjct: 404 aacattcagaaggctctcatgggg 427
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>gb|AC124510.4| Mus musculus BAC clone RP23-434A8 from chromosome 12, complete sequence
          Length = 194104

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 103    acattcagcaggctctcatg 122
              ||||||||||||||||||||
Sbjct: 174466 acattcagcaggctctcatg 174447
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>emb|AL590677.7| Human DNA sequence from clone RP11-214D15 on chromosome 10 Contains the
             5' end of the gene for a novel protein (FLJ40283), a novel
             gene and two CpG islands, complete sequence
          Length = 127714

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 102   aacattcagcaggctctcatgggg 125
             ||||||||| ||||||||||||||
Sbjct: 51834 aacattcagaaggctctcatgggg 51811
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>gb|AF091066.1|AF091066 Callitrichine herpesvirus 3 isolate Animal Cj0159 terminase gene,
           partial cds
          Length = 378

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 101 caacattcagcaggctctcatggg 124
           ||||||||||||||| ||||||||
Sbjct: 73  caacattcagcaggcgctcatggg 50
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>gb|AF091065.1|AF091065 Callitrichine herpesvirus 3 isolate Animal Cj021 terminase gene,
           partial cds
          Length = 378

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 101 caacattcagcaggctctcatggg 124
           ||||||||||||||| ||||||||
Sbjct: 73  caacattcagcaggcgctcatggg 50
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>gb|AF091063.1|AF091063 Callitrichine herpesvirus 3 isolate Animal Cj0132 terminase gene,
           partial cds
          Length = 378

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 101 caacattcagcaggctctcatggg 124
           ||||||||||||||| ||||||||
Sbjct: 73  caacattcagcaggcgctcatggg 50
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>gb|AF091062.1|AF091062 Callitrichine herpesvirus 3 isolate Animal Cj0222 terminase gene,
           partial cds
          Length = 378

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 101 caacattcagcaggctctcatggg 124
           ||||||||||||||| ||||||||
Sbjct: 73  caacattcagcaggcgctcatggg 50
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>dbj|AK101722.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061B08, full
            insert sequence
          Length = 2930

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                       
Query: 158  tcttcctcaggaaggcgtanaggtagt 184
            ||||||||||||||||||| | |||||
Sbjct: 2582 tcttcctcaggaaggcgtagatgtagt 2556
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>gb|AC147245.3| Mus musculus BAC clone RP23-462E12 from 12, complete sequence
          Length = 179735

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 103    acattcagcaggctctcatg 122
              ||||||||||||||||||||
Sbjct: 176703 acattcagcaggctctcatg 176722
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>gb|AF319782.2| Callitrichine herpesvirus 3 strain CJ0149, complete genome
          Length = 149696

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 101   caacattcagcaggctctcatggg 124
             ||||||||||||||| ||||||||
Sbjct: 45995 caacattcagcaggcgctcatggg 46018


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,835,479
Number of Sequences: 3902068
Number of extensions: 2835479
Number of successful extensions: 61259
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61160
Number of HSP's gapped (non-prelim): 99
length of query: 402
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 380
effective length of database: 17,147,199,772
effective search space: 6515935913360
effective search space used: 6515935913360
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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