ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd23l03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1FSTL3_MOUSE (Q9EQC7) Follistatin-related protein 3 precursor (Fo... 31 3.4
2NF2L2_HUMAN (Q16236) Nuclear factor erythroid 2-related factor 2... 31 3.4
3NCOA3_RAT (Q9EPU2) Nuclear receptor coactivator 3 (EC 2.3.1.48) ... 30 4.4
4RP1_BOVIN (Q8MJ05) Oxygen-regulated protein 1 (Retinitis pigment... 30 4.4
5FSTL3_HUMAN (O95633) Follistatin-related protein 3 precursor (Fo... 30 5.8
6GUNB_PSEFL (P18126) Endoglucanase B precursor (EC 3.2.1.4) (Endo... 30 5.8
7DNAK_CHLAB (Q8GH79) Chaperone protein dnaK (Heat shock protein 7... 30 5.8
8Y2143_SULTO (Q96YM9) UPF0284 protein ST2143 30 7.6
9NMT2_ARATH (Q94L32) Probable glycylpeptide N-tetradecanoyltransf... 29 9.9

>FSTL3_MOUSE (Q9EQC7) Follistatin-related protein 3 precursor (Follistatin-like|
           3) (Follistatin-related gene protein)
          Length = 256

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +3

Query: 246 CRLSSCLPPSQGWSDLCKETSWNHQAQCHLEVTTLVLQRS 365
           CR + C  PS    +LC   +  + + CHL   T  L RS
Sbjct: 193 CRAAPCPVPSNPGQELCGNNNVTYISSCHLRQATCFLGRS 232



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>NF2L2_HUMAN (Q16236) Nuclear factor erythroid 2-related factor 2 (NF-E2-related|
           factor 2) (NFE2-related factor 2) (Nuclear factor,
           erythroid derived 2, like 2) (HEBP1)
          Length = 605

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -3

Query: 274 EGGRQEESLHLLSKPVGWLNTDRRRQLEEEEGSPY 170
           E G  ++SLHLL K +  L  +    L +E+G PY
Sbjct: 542 EKGENDKSLHLLKKQLSTLYLEVFSMLRDEDGKPY 576



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>NCOA3_RAT (Q9EPU2) Nuclear receptor coactivator 3 (EC 2.3.1.48) (NCoA-3)|
           (Amplified in breast cancer-1 protein homolog) (AIB-1)
           (Fragment)
          Length = 1082

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 24/75 (32%), Positives = 38/75 (50%)
 Frame = +1

Query: 379 EVTEPSTKATTRDEHNFSTGCHKKVSIPFVPPLRKSGPPAHLRNIEDQDLPMVVDAXGLL 558
           EV + + +AT +D  + ++G    V    + P +K    A LR + D+D P  V A  L 
Sbjct: 397 EVAKITAEATGKDTSSTASGGEGSVXQEQLSPXKKENN-ALLRYLLDRDDPSDVLAKELQ 455

Query: 559 PKQDDIDNKGALDSC 603
           P+ D  D+K +  SC
Sbjct: 456 PQADGGDSKLSQCSC 470



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>RP1_BOVIN (Q8MJ05) Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein|
            homolog)
          Length = 2105

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
 Frame = -1

Query: 330  DTELDGSSWFLYRGRSILAREEGKRKVYTFY------PNQWGGSTPIDADSSRKRKVAHM 169
            ++ELDG   FL +  S   ++   + VYT +       ++  GST  ++ +S +R V+ M
Sbjct: 1377 ESELDGEHSFLDKSESCSLKKFQDKSVYTSFDKEDSKTSEEPGST-TNSMTSSERNVSEM 1435

Query: 168  KSLSSREKSITNIF 127
            +S    E   T+IF
Sbjct: 1436 ESFEELENQNTDIF 1449



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>FSTL3_HUMAN (O95633) Follistatin-related protein 3 precursor (Follistatin-like|
           3) (Follistatin-related gene protein)
          Length = 263

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +3

Query: 246 CRLSSCLPPSQGWSDLCKETSWNHQAQCHLEVTTLVLQRS 365
           CR + C  PS    +LC   +  + + CH+   T  L RS
Sbjct: 195 CRAAPCPVPSSPGQELCGNNNVTYISSCHMRQATCFLGRS 234



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>GUNB_PSEFL (P18126) Endoglucanase B precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase) (Cellulase) (EGB)
          Length = 511

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
 Frame = -1

Query: 360 AEALEW----SPLDDTELDGSSWFLYRGRSILAREEGKRKVYTFYPNQWGGSTPIDADSS 193
           A+A  W    +PL +   +G  W    GRS +AR     +   +       STP+ + SS
Sbjct: 178 AQACNWYGTLTPLCNNTSNG--WGYEDGRSCVARTTCSAQPAPYGIVSTSSSTPLSSSSS 235

Query: 192 RKRKVAHMKSLSSREKS 142
            +  VA   SLSS   S
Sbjct: 236 SRSSVASSSSLSSATSS 252



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>DNAK_CHLAB (Q8GH79) Chaperone protein dnaK (Heat shock protein 70) (Heat shock|
           70 kDa protein) (HSP70)
          Length = 659

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = +1

Query: 370 EELEVTEPSTKATTRDEHNFSTGCHKKVSIPFVPPLRKSGPPAHLRNIEDQDLPMV 537
           E ++    S  A  +D  N +T   KK S    PP   S   A+  NIE+ D+ +V
Sbjct: 599 EAMQSQSASAAANAQDGPNINTEDLKKHSFSTKPPTGNSSSSANNENIEEADVEIV 654



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>Y2143_SULTO (Q96YM9) UPF0284 protein ST2143|
          Length = 345

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 15/59 (25%), Positives = 30/59 (50%)
 Frame = -1

Query: 594 KCTLIIDVVLLGKQAVCVDYHGKILIFDVTEMSWRTALSKGWNERNAHFLVASSGKVVL 418
           K   + D +LLG   + + + GKIL+   T+M+   A+ K +N+     +   + K ++
Sbjct: 207 KLAKLSDPMLLGVSGIALGFKGKILLAGGTQMTAAAAIIKEFNKNKLKDIAIGTTKWII 265



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>NMT2_ARATH (Q94L32) Probable glycylpeptide N-tetradecanoyltransferase 2 (EC|
           2.3.1.97) (Peptide N-myristoyltransferase 2)
           (Myristoyl-CoA:protein N-myristoyltransferase 2) (NMT 2)
           (Type I N-myristoyltransferase 2)
          Length = 430

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
 Frame = +2

Query: 11  IYDY*NGPPKTLDRTQ----CRSSVTIEAGRTFVTTSSSKSCMNI 133
           +Y Y    P+T D T     C SS+TI   R + T   + +C N+
Sbjct: 315 VYSYVVVSPETHDVTDFCSFCNSSITIPGNRKYTTLECAYACCNV 359


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,872,305
Number of Sequences: 219361
Number of extensions: 1801200
Number of successful extensions: 5420
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5418
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5710231900
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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