>UBP36_HUMAN (Q9P275) Ubiquitin carboxyl-terminal hydrolase 36 (EC 3.1.2.15)|
            (Ubiquitin thioesterase 36)
            (Ubiquitin-specific-processing protease 36)
            (Deubiquitinating enzyme 36)
          Length = 1121

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
 Frame = -2

Query: 580  DAKRQVVIHTEDLRAEVTVPCWDD-VAVPNTETIEYRSSGKKSIGYVLDEWDEEYDRGKA 404
            D  ++++ ++ D      V  WD  ++  + + IE   S +     V+D+WDEE+DRGK 
Sbjct: 1022 DVVQELLKYSSDKAYGRKVLTWDGKMSAVSQDAIE--DSRQARTETVVDDWDEEFDRGKE 1079

Query: 403  KKVRKAKEDE 374
            KK++K K ++
Sbjct: 1080 KKIKKFKREK 1089

>MLL3_MOUSE (Q8BRH4) Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog|
            (Histone-lysine N-methyltransferase, H3 lysine-4 specific
            MLL3) (EC 2.1.1.43)
          Length = 4903

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 22/56 (39%), Positives = 28/56 (50%)
 Frame = -2

Query: 538  AEVTVPCWDDVAVPNTETIEYRSSGKKSIGYVLDEWDEEYDRGKAKKVRKAKEDED 371
            A   VPC  D AV  T+   Y  S +  I    D   EE  +GK K+ RK K+D+D
Sbjct: 3559 ANSNVPCGQDPAV--TQGQNYSGSSQSLIQLYSDIIPEE--KGKKKRTRKKKKDDD 3610

>MYT1L_HUMAN (Q9UL68) Myelin transcription factor 1-like protein (MyT1L protein)|
           (MyT1-L)
          Length = 1186

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = -2

Query: 439 DEWDEEYDRGKAKKVRKAKEDEDDDGTNPFQAEANHVSARKEKQ 308
           DE DEE DR + +++ +  ED+D+DG +    E       +E++
Sbjct: 121 DEEDEEGDREEEEEIEEEDEDDDEDGEDVEDEEEEEEEEEEEEE 164

>SAN1_YEAST (P22470) Protein SAN1|
          Length = 610

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 11/27 (40%), Positives = 20/27 (74%)
 Frame = -2

Query: 439 DEWDEEYDRGKAKKVRKAKEDEDDDGT 359
           DE+++E D  KAK+ R ++ +E+ +GT
Sbjct: 170 DEYEDEVDSTKAKRKRDSENEEESEGT 196

>MUTS_ACIAD (Q6FC54) DNA mismatch repair protein mutS|
          Length = 881

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = -1

Query: 377 RGRRRHEPLPG*GKPRISAKGETKTLEQAGQTTSLGE 267
           RG+   EP+P  G P  +A+G    L +AGQT ++ E
Sbjct: 61  RGKANGEPIPMAGVPYHAAEGYLARLVRAGQTVAICE 97

>HSP90_PODAN (O43109) Heat shock protein 90 homolog (Suppressor of vegetative|
           incompatibility MOD-E)
          Length = 701

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
 Frame = -2

Query: 511 DVAVPN--TETIEYRSSGKKSIGYVLDEWDEEYDRGKAKKVRKAKEDEDD 368
           +V VP+   ET+E     K  I  V D+ +++  + K KKV++ K +E++
Sbjct: 212 EVEVPDEEAETVEEGDDKKPKIEEVEDDEEDKEKKPKTKKVKEVKTEEEE 261

>MLL3_HUMAN (Q8NEZ4) Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog|
            (Histone-lysine N-methyltransferase, H3 lysine-4 specific
            MLL3) (EC 2.1.1.43) (Homologous to ALR protein)
          Length = 4911

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 20/60 (33%), Positives = 28/60 (46%)
 Frame = -2

Query: 538  AEVTVPCWDDVAVPNTETIEYRSSGKKSIGYVLDEWDEEYDRGKAKKVRKAKEDEDDDGT 359
            A  ++PC  D  +  T    Y  S +  I    D   EE  +GK K+ RK K D+D + T
Sbjct: 3564 ANSSLPCGQDSTI--THGHSYPGSTQSLIQLYSDIIPEE--KGKKKRTRKKKRDDDAEST 3619

>NOP58_YEAST (Q12499) Nucleolar protein NOP58 (Nucleolar protein NOP5)|
          Length = 511

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = -2

Query: 430 DEEYDRGKAKKVRKAKEDEDDDGTNPFQAEANHVSARKEKQ 308
           D+E +  K KK +K K D+D+D  +  +A+      +++K+
Sbjct: 445 DDEEEEKKEKKEKKRKRDDDEDSKDSKKAKKEKKDKKEKKE 485

>VCOM_ADE02 (P03267) Minor core protein (Protein V) (pV)|
          Length = 369

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 13/40 (32%), Positives = 25/40 (62%)
 Frame = -2

Query: 430 DEEYDRGKAKKVRKAKEDEDDDGTNPFQAEANHVSARKEK 311
           +++Y   K K+V+K K+D+DDD  +  + E  H +A + +
Sbjct: 26  EQDYKPRKLKRVKKKKKDDDDDELDD-EVELLHATAPRRR 64

>ATL5G_ARATH (Q9LF64) Probable RING-H2 finger protein ATL5G|
          Length = 362

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
 Frame = -2

Query: 547 DLRAEVTVP-----CWDDVAVPNTETIEYRSSGKKSIGYVLDEW-DEEYDRGKAKKVRKA 386
           D R+E+ +P       D+ ++P   ++   S    SI  VL E  DEE + G     ++ 
Sbjct: 252 DARSELQLPEERRETKDEDSLPIRRSVSLNSGVVVSIADVLREIEDEEGESGGVGTSQRR 311

Query: 385 KEDEDDDGTNPFQAEANHVS 326
           +E ED DG      EAN  S
Sbjct: 312 EEGEDGDGKTIPPTEANQRS 331

>HSP3_MURBR (P83213) Sperm protamine P3|
          Length = 54

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -1

Query: 419 RPWKGKEGQKSEGRRGRRRHEPLPG*GKPRISAKGE 312
           R  KGK G+K +G++ RRR     G GK +   KG+
Sbjct: 5   RRGKGKGGKKKKGKKRRRRGRKGKGKGKKKGKRKGK 40

>CASQ2_RAT (P51868) Calsequestrin-2 precursor (Calsequestrin, cardiac muscle|
           isoform)
          Length = 413

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -2

Query: 442 LDEWDEEYDRGKAKKVRKAKEDEDDDGTN 356
           L++W E+   GK        EDEDDDG N
Sbjct: 358 LEDWIEDVLSGKINTEDDDNEDEDDDGDN 386

>CN129_MOUSE (Q8BGR8) UPF0279 protein C14orf129 homolog|
          Length = 139

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 7/42 (16%)
 Frame = -2

Query: 529 TVPCWDDVAVPNTET-------IEYRSSGKKSIGYVLDEWDE 425
           ++PC DDVA  N ET       +E   +G + +GY  D+ ++
Sbjct: 56  SMPCADDVAYINVETKERNRYCLELTEAGLRVVGYAFDQVED 97

>RS5_BIFLO (P59122) 30S ribosomal protein S5|
          Length = 233

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = -1

Query: 410 KGKEGQKSEGRRGRRRH 360
           KG+ GQ+ EGRRG RR+
Sbjct: 19  KGRRGQRGEGRRGERRN 35


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,312,361
Number of Sequences: 219361
Number of extensions: 1338898
Number of successful extensions: 5004
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4965
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5538924943
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)