ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd23k17 |
|---|---|
| Clone Library Name | barley_pub |
>NTF2_ORYSA (Q9XJ54) Nuclear transport factor 2 (NTF-2)| Length = 122 Score = 212 bits (540), Expect = 4e-55 Identities = 99/122 (81%), Positives = 111/122 (90%) Frame = -2 Query: 477 MDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQC 298 MD D+V+KAFV+HYY+TFD+NR ALV LYQDGSMLTFEG++F G AAIAGKLGSLPF QC Sbjct: 1 MDADAVAKAFVEHYYRTFDTNRPALVSLYQDGSMLTFEGQQFLGAAAIAGKLGSLPFAQC 60 Query: 297 QHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRLN 118 H I+TVDCQPSGPQGG+LVFVSG++ TGP EHPLKFSQMF LLPAGG+FYVQNDMFRLN Sbjct: 61 HHDINTVDCQPSGPQGGMLVFVSGSLRTGPDEHPLKFSQMFQLLPAGGNFYVQNDMFRLN 120 Query: 117 YG 112 YG Sbjct: 121 YG 122
>NTF2_ARATH (Q9C7F5) Nuclear transport factor 2 (NTF-2)| Length = 126 Score = 174 bits (442), Expect = 1e-43 Identities = 84/122 (68%), Positives = 95/122 (77%), Gaps = 1/122 (0%) Frame = -2 Query: 477 MDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQC 298 MDPD+VSKAFV+HYY TFD+NR L GLYQ+ SMLTFEG+K G +I KL SLPFQQC Sbjct: 4 MDPDAVSKAFVEHYYSTFDTNRVGLAGLYQEASMLTFEGQKIQGVQSIVAKLTSLPFQQC 63 Query: 297 QHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPA-GGSFYVQNDMFRL 121 +H I TVDCQPSGP G+LVFVSG + EH LKFSQMFHL+P GSFYV ND+FRL Sbjct: 64 KHHISTVDCQPSGPASGMLVFVSGNLQLAGEEHALKFSQMFHLMPTPQGSFYVFNDIFRL 123 Query: 120 NY 115 NY Sbjct: 124 NY 125
>NTF2_CANGA (Q6FRC6) Nuclear transport factor 2 (NTF-2)| Length = 125 Score = 125 bits (315), Expect = 5e-29 Identities = 59/122 (48%), Positives = 85/122 (69%) Frame = -2 Query: 480 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 301 +MD +++++ F + YY FDS+R+ L LY+D SMLTFE + G +I KL SLPFQ+ Sbjct: 2 SMDFNALAQQFTEFYYNQFDSDRSQLGNLYRDESMLTFETSQLQGAKSIVEKLVSLPFQK 61 Query: 300 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 121 H+I T+D QP+ P G VLV ++G + ++P +FSQ+FHL+P G S+YV ND+FRL Sbjct: 62 VAHRITTLDAQPASPNGDVLVMITGDLLIDDEQNPQRFSQVFHLIPDGNSYYVFNDIFRL 121 Query: 120 NY 115 NY Sbjct: 122 NY 123
>NTF2_EMENI (Q96VN3) Nuclear transport factor 2 (NTF-2)| Length = 125 Score = 125 bits (314), Expect = 7e-29 Identities = 62/121 (51%), Positives = 82/121 (67%), Gaps = 1/121 (0%) Frame = -2 Query: 474 DPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQCQ 295 D S+++ FV YYQTFD NRA L LY+D SMLTFE G A I KL SLPFQ+ Q Sbjct: 3 DFQSIAQQFVTFYYQTFDGNRAGLAPLYRDHSMLTFETSAIQGVAGIIEKLTSLPFQKVQ 62 Query: 294 HKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAG-GSFYVQNDMFRLN 118 H++ T+D QPSG GG+LV V+G + ++P+ ++Q F L+P G GS++V ND+FRL Sbjct: 63 HQVSTLDAQPSGEHGGILVLVTGALLVDEEKNPMNYTQTFQLMPDGAGSYFVLNDVFRLI 122 Query: 117 Y 115 Y Sbjct: 123 Y 123
>NTF2_CLAHE (Q8NJ52) Nuclear transport factor 2 (NTF-2) (Allergen Cla h ?)| Length = 125 Score = 124 bits (312), Expect = 1e-28 Identities = 59/120 (49%), Positives = 82/120 (68%) Frame = -2 Query: 474 DPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQCQ 295 D +++++ F + YY+TFD++RA L LY++ SMLTFE F G A I GKL LPFQ+ + Sbjct: 3 DFNAIAQQFTEFYYKTFDTDRAQLAPLYRENSMLTFEQSPFLGTANIVGKLQELPFQRIE 62 Query: 294 HKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRLNY 115 H++ TVD QPS GG+LV VSG + P+ ++Q F LLPA G++YV ND+FRL Y Sbjct: 63 HQVATVDAQPSNESGGILVVVSGALLVEEERRPMSYTQTFQLLPADGAYYVFNDVFRLVY 122
>NTF2_SCHPO (Q10100) Nuclear transport factor 2 (NTF-2)| Length = 123 Score = 124 bits (310), Expect = 2e-28 Identities = 59/121 (48%), Positives = 84/121 (69%) Frame = -2 Query: 474 DPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQCQ 295 D ++++ F Q YYQTFDS+R+ L LY++ SML+FEG + G AI KL SLPFQ+ Q Sbjct: 3 DYNALATQFTQFYYQTFDSDRSQLSSLYREESMLSFEGAQLQGTKAIVEKLVSLPFQRVQ 62 Query: 294 HKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRLNY 115 H+I T+D QP+G G V+V V+G + + ++SQ+FHL+ G++YV ND+FRLNY Sbjct: 63 HRISTLDAQPTGTTGSVIVMVTGELLLDEEQMAQRYSQVFHLVNNNGNYYVLNDLFRLNY 122 Query: 114 G 112 G Sbjct: 123 G 123
>NTF2_YEAST (P33331) Nuclear transport factor 2 (NTF-2) (Nuclear transport| factor P10) Length = 125 Score = 123 bits (309), Expect = 3e-28 Identities = 58/122 (47%), Positives = 85/122 (69%) Frame = -2 Query: 480 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 301 ++D +++++ F Q YY FD++R+ L LY++ SMLTFE + G I KL SLPFQ+ Sbjct: 2 SLDFNTLAQNFTQFYYNQFDTDRSQLGNLYRNESMLTFETSQLQGAKDIVEKLVSLPFQK 61 Query: 300 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 121 QH+I T+D QP+ P G VLV ++G + ++P +FSQ+FHL+P G S+YV ND+FRL Sbjct: 62 VQHRITTLDAQPASPNGDVLVMITGDLLIDEEQNPQRFSQVFHLIPDGNSYYVFNDIFRL 121 Query: 120 NY 115 NY Sbjct: 122 NY 123
>NTF2_KLULA (Q6CQX4) Nuclear transport factor 2 (NTF-2)| Length = 125 Score = 122 bits (307), Expect = 5e-28 Identities = 58/122 (47%), Positives = 82/122 (67%) Frame = -2 Query: 480 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 301 ++D S+++ F + YY FDS+R L LY++ SMLTFE + G I KL SLPFQ+ Sbjct: 2 SVDFSSLAQQFTEFYYNQFDSDRTQLGNLYREQSMLTFETTQLQGAKDIVEKLVSLPFQK 61 Query: 300 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 121 H+I T+D QP+ P G VLV ++G + ++P +FSQ+FHL+P G S+YV ND+FRL Sbjct: 62 VAHRITTLDAQPASPNGDVLVMITGDLLIDEEQNPQRFSQVFHLMPEGSSYYVYNDIFRL 121 Query: 120 NY 115 NY Sbjct: 122 NY 123
>NTF2_ASHGO (Q75AA5) Nuclear transport factor 2 (NTF-2)| Length = 125 Score = 122 bits (307), Expect = 5e-28 Identities = 58/122 (47%), Positives = 83/122 (68%) Frame = -2 Query: 480 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 301 +MD ++++ F + YY FD++R+ L LY+D SMLTFE + G I KL SLPFQ+ Sbjct: 2 SMDFSALAQQFTEFYYNQFDTDRSQLGNLYRDQSMLTFETSQLQGAKDIVEKLVSLPFQK 61 Query: 300 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 121 QH+I T+D QP+ P G VLV ++G + ++ +FSQ+FHL+P G S+YV ND+FRL Sbjct: 62 VQHRITTLDAQPASPNGDVLVMITGDLLIDDEQNAQRFSQVFHLMPEGNSYYVFNDIFRL 121 Query: 120 NY 115 NY Sbjct: 122 NY 123
>NTF2_YARLI (Q6CC82) Nuclear transport factor 2 (NTF-2)| Length = 123 Score = 119 bits (299), Expect = 4e-27 Identities = 60/122 (49%), Positives = 86/122 (70%), Gaps = 1/122 (0%) Frame = -2 Query: 480 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 301 ++D ++++K F + YYQTFD++R+ L LY+D SMLTF G + G AI KL LPF Q Sbjct: 2 SVDFNTLAKQFCEFYYQTFDTDRSQLGNLYRDHSMLTFTGTQHQGAQAIVEKLVGLPFGQ 61 Query: 300 CQHKIDTVDCQPSGPQGG-VLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFR 124 +HKI +D QP+ QGG V+V V+G + G++PL ++Q+FHL+P G S+YV ND+FR Sbjct: 62 VRHKISDIDAQPASAQGGDVIVLVTGELCVD-GDNPLPYAQVFHLIPDGSSYYVFNDIFR 120 Query: 123 LN 118 LN Sbjct: 121 LN 122
>NTF2_DEBHA (Q6BWC0) Nuclear transport factor 2 (NTF-2)| Length = 124 Score = 118 bits (296), Expect = 9e-27 Identities = 57/122 (46%), Positives = 80/122 (65%) Frame = -2 Query: 480 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 301 ++D ++V+ F YYQ FDS+R L LY++ SMLTFE + G I KL SLPFQ+ Sbjct: 2 SVDFNTVASEFCNFYYQQFDSDRTQLGNLYREQSMLTFETSQLQGAKDIVEKLVSLPFQK 61 Query: 300 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 121 H+I T+D QP P G +LV V+G + ++ ++SQ+FHL+P G S+YV ND+FRL Sbjct: 62 VAHRISTLDAQPGSPNGDILVMVTGELIIDDEQNAQRYSQVFHLIPDGNSYYVFNDIFRL 121 Query: 120 NY 115 NY Sbjct: 122 NY 123
>NTF2_CANAL (Q9P926) Nuclear transport factor 2 (NTF-2)| Length = 124 Score = 114 bits (286), Expect = 1e-25 Identities = 55/122 (45%), Positives = 80/122 (65%) Frame = -2 Query: 480 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 301 ++D ++V+ F YY FDS+R+ L LY++ SMLTFE + G I KL SLPFQ+ Sbjct: 2 SVDFNAVATEFCNFYYNQFDSDRSQLGNLYRNESMLTFETSQLQGARDIVEKLASLPFQK 61 Query: 300 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 121 H+I T+D QP+ G +LV V+G + ++ ++SQ+FHL+P GS+YV ND+FRL Sbjct: 62 VAHRISTLDAQPASANGDILVMVTGELLIDEEQNAQRYSQVFHLIPDNGSYYVFNDIFRL 121 Query: 120 NY 115 NY Sbjct: 122 NY 123
>NTF2_NEUCR (P87102) Nuclear transport factor 2 (NTF-2)| Length = 124 Score = 102 bits (253), Expect = 8e-22 Identities = 53/121 (43%), Positives = 76/121 (62%), Gaps = 1/121 (0%) Frame = -2 Query: 480 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 301 ++D +++ FV HYY TFDS+R L GLY+D SMLTFEG + G I KL SLPFQ+ Sbjct: 2 SLDFTAIATQFVAHYYSTFDSDRKNLAGLYRDNSMLTFEGAQSLGAQGITEKLTSLPFQK 61 Query: 300 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHL-LPAGGSFYVQNDMFR 124 +H+ D QP+ GG+++ V+G + + PL +SQ F L A G ++V ND+F+ Sbjct: 62 VKHEYGPPDAQPTA-TGGIIILVTGQLIVDDEQRPLGYSQAFQLSQDASGQWFVFNDIFK 120 Query: 123 L 121 L Sbjct: 121 L 121
>NTF2_RAT (P61972) Nuclear transport factor 2 (NTF-2)| Length = 127 Score = 91.3 bits (225), Expect = 1e-18 Identities = 53/123 (43%), Positives = 72/123 (58%), Gaps = 4/123 (3%) Frame = -2 Query: 468 DSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQCQHK 289 + + +F+QHYYQ FD++R L +Y D S LT+EG++F G AAI KL SLPFQ+ QH Sbjct: 8 EQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHS 67 Query: 288 IDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLK-FSQMFHLLPAGGSFYVQNDMFRL--- 121 I D QP+ P ++ V G + E P+ F QMF L ++ NDMFRL Sbjct: 68 ITAQDHQPT-PDSCIISMVVGQLKA--DEDPIMGFHQMFLLKNINDAWVCTNDMFRLALH 124 Query: 120 NYG 112 N+G Sbjct: 125 NFG 127
>NTF2_MOUSE (P61971) Nuclear transport factor 2 (NTF-2)| Length = 127 Score = 91.3 bits (225), Expect = 1e-18 Identities = 53/123 (43%), Positives = 72/123 (58%), Gaps = 4/123 (3%) Frame = -2 Query: 468 DSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQCQHK 289 + + +F+QHYYQ FD++R L +Y D S LT+EG++F G AAI KL SLPFQ+ QH Sbjct: 8 EQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHS 67 Query: 288 IDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLK-FSQMFHLLPAGGSFYVQNDMFRL--- 121 I D QP+ P ++ V G + E P+ F QMF L ++ NDMFRL Sbjct: 68 ITAQDHQPT-PDSCIISMVVGQLKA--DEDPIMGFHQMFLLKNINDAWVCTNDMFRLALH 124 Query: 120 NYG 112 N+G Sbjct: 125 NFG 127
>NTF2_HUMAN (P61970) Nuclear transport factor 2 (NTF-2) (Placental protein 15)| (PP15) Length = 127 Score = 91.3 bits (225), Expect = 1e-18 Identities = 53/123 (43%), Positives = 72/123 (58%), Gaps = 4/123 (3%) Frame = -2 Query: 468 DSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQCQHK 289 + + +F+QHYYQ FD++R L +Y D S LT+EG++F G AAI KL SLPFQ+ QH Sbjct: 8 EQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHS 67 Query: 288 IDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLK-FSQMFHLLPAGGSFYVQNDMFRL--- 121 I D QP+ P ++ V G + E P+ F QMF L ++ NDMFRL Sbjct: 68 ITAQDHQPT-PDSCIISMVVGQLKA--DEDPIMGFHQMFLLKNINDAWVCTNDMFRLALH 124 Query: 120 NYG 112 N+G Sbjct: 125 NFG 127
>NTF2_XENLA (O42242) Nuclear transport factor 2 (NTF-2) (p10)| Length = 127 Score = 84.3 bits (207), Expect = 2e-16 Identities = 48/122 (39%), Positives = 71/122 (58%), Gaps = 3/122 (2%) Frame = -2 Query: 468 DSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQCQHK 289 + + +F+Q YYQTFD++R L +Y D S LT+EG+++ G AAI KL LPFQ+ QH Sbjct: 8 EQIGASFIQQYYQTFDADRTQLAVIYTDASCLTWEGQQYHGKAAIVEKLSLLPFQKIQHS 67 Query: 288 IDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL---N 118 I + D QP+ P ++ V G + + + F Q+F L ++ NDMFRL N Sbjct: 68 ITSQDHQPT-PDSCIISMVVGQL-KADDDPIMGFHQVFLLKNIQDAWVCTNDMFRLALHN 125 Query: 117 YG 112 +G Sbjct: 126 FG 127
>NTF2_CAEEL (Q21735) Probable nuclear transport factor 2 (NTF-2)| Length = 133 Score = 72.0 bits (175), Expect = 9e-13 Identities = 50/127 (39%), Positives = 70/127 (55%), Gaps = 8/127 (6%) Frame = -2 Query: 474 DPDSVSKAFVQHYYQTFD-----SNRAALVGLYQ-DGSMLTFEGEKFGGPAAIAGKLGSL 313 D +SV+KAF+QHYY FD S L LY + S +TFEG++ G I K +L Sbjct: 6 DYESVAKAFIQHYYSKFDVGDGMSRAQGLSDLYDPENSYMTFEGQQAKGRDGILQKFTTL 65 Query: 312 PFQQCQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLK-FSQMFHLLPAG-GSFYVQ 139 F + Q I +D QP G + V V G + T E P+ FSQ+F L P GS+++ Sbjct: 66 GFTKIQRAITVIDSQPL-YDGSIQVMVLGQLKT--DEDPINPFSQVFILRPNNQGSYFIG 122 Query: 138 NDMFRLN 118 N++FRL+ Sbjct: 123 NEIFRLD 129
>G3BP_SCHPO (O94260) Putative G3BP-like protein| Length = 434 Score = 49.3 bits (116), Expect = 6e-06 Identities = 39/120 (32%), Positives = 53/120 (44%), Gaps = 5/120 (4%) Frame = -2 Query: 468 DSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTF--EGEKFG---GPAAIAGKLGSLPFQ 304 D + FVQ YY + L Y S L EGE G I K+ L FQ Sbjct: 16 DEIGWMFVQEYYTYLNKEPNRLHCFYTKKSTLIHGDEGESISLCHGQQEIHNKILDLDFQ 75 Query: 303 QCQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFR 124 C+ I VD S GG+++ V G ++ G+ KF+Q F L ++V ND+FR Sbjct: 76 NCKVLISNVDSLASS-NGGIVIQVLGEMSN-KGKLSRKFAQTFFLAEQPNGYFVLNDIFR 133
>G3B2_MOUSE (P97379) Ras-GTPase-activating protein-binding protein 2 (GAP| SH3-domain-binding protein 2) (G3BP-2) Length = 482 Score = 48.1 bits (113), Expect = 1e-05 Identities = 44/131 (33%), Positives = 54/131 (41%), Gaps = 11/131 (8%) Frame = -2 Query: 483 EAMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEG--------EKFGGPAAIAG 328 E P V + FV+ YY + L Y S G E G I Sbjct: 4 EKPSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHH 63 Query: 327 KLGSLPFQQCQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGG-- 154 K+ SL F +C KI VD + GV+V V G ++ G+ KF Q F L P G Sbjct: 64 KVLSLNFSECHTKIRHVDAHAT-LSDGVVVQVMGLLSNS-GQPERKFMQTFVLAPEGSVP 121 Query: 153 -SFYVQNDMFR 124 FYV NDMFR Sbjct: 122 NKFYVHNDMFR 132
>G3B2_HUMAN (Q9UN86) Ras-GTPase-activating protein-binding protein 2 (GAP| SH3-domain-binding protein 2) (G3BP-2) Length = 482 Score = 48.1 bits (113), Expect = 1e-05 Identities = 44/131 (33%), Positives = 54/131 (41%), Gaps = 11/131 (8%) Frame = -2 Query: 483 EAMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEG--------EKFGGPAAIAG 328 E P V + FV+ YY + L Y S G E G I Sbjct: 4 EKPSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHH 63 Query: 327 KLGSLPFQQCQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGG-- 154 K+ SL F +C KI VD + GV+V V G ++ G+ KF Q F L P G Sbjct: 64 KVLSLNFSECHTKIRHVDAHAT-LSDGVVVQVMGLLSNS-GQPERKFMQTFVLAPEGSVP 121 Query: 153 -SFYVQNDMFR 124 FYV NDMFR Sbjct: 122 NKFYVHNDMFR 132
>G3BP_HUMAN (Q13283) Ras-GTPase-activating protein-binding protein 1 (EC| 3.6.1.-) (ATP-dependent DNA helicase VIII) (GAP SH3-domain-binding protein 1) (G3BP-1) (HDH-VIII) Length = 466 Score = 40.4 bits (93), Expect = 0.003 Identities = 42/131 (32%), Positives = 55/131 (41%), Gaps = 11/131 (8%) Frame = -2 Query: 483 EAMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEG-EKFGGPA-AIAG------ 328 E P V + FV+ YY + L Y S G + G PA A+ G Sbjct: 4 EKPSPLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHR 63 Query: 327 KLGSLPFQQCQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGG-- 154 K+ S F C KI VD + GV+V V G ++ + +F Q F L P G Sbjct: 64 KVMSQNFTNCHTKIRHVDAHAT-LNDGVVVQVMGLLSNN-NQALRRFMQTFVLAPEGSVA 121 Query: 153 -SFYVQNDMFR 124 FYV ND+FR Sbjct: 122 NKFYVHNDIFR 132
>G3BP_MOUSE (P97855) Ras-GTPase-activating protein-binding protein 1 (EC| 3.6.1.-) (ATP-dependent DNA helicase VIII) (GAP SH3-domain-binding protein 1) (G3BP-1) (HDH-VIII) Length = 465 Score = 40.4 bits (93), Expect = 0.003 Identities = 42/131 (32%), Positives = 55/131 (41%), Gaps = 11/131 (8%) Frame = -2 Query: 483 EAMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEG-EKFGGPA-AIAG------ 328 E P V + FV+ YY + L Y S G + G PA A+ G Sbjct: 4 EKPSPLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYAHGGLDSNGKPADAVYGQKEIHR 63 Query: 327 KLGSLPFQQCQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGG-- 154 K+ S F C KI VD + GV+V V G ++ + +F Q F L P G Sbjct: 64 KVMSQNFTNCHTKIRHVDAHAT-LNDGVVVQVMGLLSNN-NQALRRFMQTFVLAPEGSVA 121 Query: 153 -SFYVQNDMFR 124 FYV ND+FR Sbjct: 122 NKFYVHNDIFR 132
>MAGA4_HUMAN (P43358) Melanoma-associated antigen 4 (MAGE-4 antigen) (MAGE-X2)| (MAGE-41) Length = 317 Score = 31.6 bits (70), Expect = 1.4 Identities = 14/58 (24%), Positives = 27/58 (46%) Frame = +2 Query: 206 PGPVVMVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSM 379 PG + VP ++ PP P+G + + + + CW+ + + P+ SP S+ Sbjct: 48 PGTLEEVPAAESAGPPQSPQGASALPTTISFTCWRQPNEGSSSQEEEGPSTSPDAESL 105
>HUTG_SALTI (Q8Z899) Formimidoylglutamase (EC 3.5.3.8) (Formiminoglutamase)| (Formiminoglutamate hydrolase) Length = 313 Score = 30.8 bits (68), Expect = 2.4 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 2/42 (4%) Frame = +2 Query: 230 ETKTRTPPWGPEGWQSTVSILCWHCWKG--RDPSLPAMAAGP 349 +T TR+ + PE WQ ++++ + C +G R+ P A GP Sbjct: 29 QTVTRSEAFFPENWQQKIALMGFACDEGVKRNSGRPGAAGGP 70
>MAGD1_MOUSE (Q9QYH6) Melanoma-associated antigen D1 (MAGE-D1 antigen)| (Neurotrophin receptor-interacting MAGE homolog) (Dlxin-1) Length = 775 Score = 30.4 bits (67), Expect = 3.1 Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 15/89 (16%) Frame = +2 Query: 206 PGPVVMV-PETKTRTPPW-GPEGWQSTVSILCWHCWKGR-------------DPSLPAMA 340 PGP+V P TP W P WQ+ S W+G D S P+ Sbjct: 360 PGPIVWPNPMAWQSTPGWQSPPSWQAPPSWQSPQDWQGPPDWQVPPDWSMPPDWSFPSDW 419 Query: 341 AGPPNFSPSKVSMEPSWYSPTSAARLESN 427 PP++ P+ + P W + + L S+ Sbjct: 420 PFPPDWIPADWPIPPDWQNLRPSPNLRSS 448
>DPO1F_THETH (P30313) DNA polymerase I, thermostable (EC 2.7.7.7) (Tfl| polymerase 1) Length = 831 Score = 30.4 bits (67), Expect = 3.1 Identities = 15/51 (29%), Positives = 25/51 (49%) Frame = -2 Query: 501 ARRAEGEAMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFG 349 A R GE P + AF++ Y+Q++ RA + G ++G + FG Sbjct: 674 AHRLSGELSIPYEEAVAFIERYFQSYPKVRAWIEGTLEEGRRRGYVETLFG 724
>PEPX_BACAN (Q81PE9) Putative Xaa-Pro dipeptidyl-peptidase (EC 3.4.14.11)| (X-Pro dipeptidyl-peptidase) (X-prolyl-dipeptidyl aminopeptidase) (X-PDAP) Length = 597 Score = 30.4 bits (67), Expect = 3.1 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = -1 Query: 166 ASWRELLRAE*HVPPELWLRKGGHSGSKELD 74 A W E L E +VP ++WL +GGH G+ D Sbjct: 345 AQWWEAL-GENNVPRKMWLHQGGHGGTSTND 374
>YJCZ_ECOLI (P39267) Hypothetical protein yjcZ| Length = 292 Score = 30.4 bits (67), Expect = 3.1 Identities = 18/53 (33%), Positives = 27/53 (50%) Frame = -2 Query: 357 KFGGPAAIAGKLGSLPFQQCQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEH 199 + G P A+A LG L + QH ++++ P+ F S T+ TG GEH Sbjct: 185 RLGSPQAVALLLGDLLEKATQHLAESINAAPTTRHYYHQWFASSTVPTG-GEH 236
>YOR2_NEIGO (O33369) Hypothetical protein (ORF2) (Fragment)| Length = 417 Score = 30.0 bits (66), Expect = 4.1 Identities = 18/63 (28%), Positives = 26/63 (41%) Frame = +2 Query: 227 PETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTS 406 P P G+ S + C K P+LP + PPN P+ + P+W PT+ Sbjct: 295 PALPCSKPATALTGYISALGHTAAKCTKNAAPTLPHSSTLPPNTPPTSSNTCPTW-DPTT 353 Query: 407 AAR 415 R Sbjct: 354 FRR 356
>PEPX_BACCR (Q81CB2) Putative Xaa-Pro dipeptidyl-peptidase (EC 3.4.14.11)| (X-Pro dipeptidyl-peptidase) (X-prolyl-dipeptidyl aminopeptidase) (X-PDAP) Length = 580 Score = 29.6 bits (65), Expect = 5.3 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = -1 Query: 166 ASWRELLRAE*HVPPELWLRKGGHSGS 86 A W E L E +VP ++WL +GGH G+ Sbjct: 328 AQWWEAL-GENNVPRKMWLHQGGHGGT 353
>HUTG_SALTY (Q8ZQR1) Formimidoylglutamase (EC 3.5.3.8) (Formiminoglutamase)| (Formiminoglutamate hydrolase) Length = 313 Score = 29.6 bits (65), Expect = 5.3 Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%) Frame = +2 Query: 230 ETKTRTPPWGPEGWQSTVSILCWHCWKG--RDPSLPAMAAGP 349 +T TR+ + PE WQ ++++ + C +G R+ P A P Sbjct: 29 QTVTRSETFSPENWQQKIALMGFACDEGVKRNAGRPGAAGAP 70
>MURE_BRUME (Q8YI71) UDP-N-acetylmuramoylalanyl-D-glutamate--2,| 6-diaminopimelate ligase (EC 6.3.2.13) (UDP-N-acetylmuramyl-tripeptide synthetase) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-tripeptide synthetase) Length = 488 Score = 29.3 bits (64), Expect = 7.0 Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 8/71 (11%) Frame = -2 Query: 411 AALVGLYQDGSMLTFEGEKFGGPAAIAGK--------LGSLPFQQCQHKIDTVDCQPSGP 256 AAL G+ DG++ + K G A IAGK + L +H + Q G Sbjct: 39 AALKGVKADGAVFAADAAKRGAVAIIAGKDTAIADAGVPVLHVDDPRHVLAIAAAQFYGK 98 Query: 255 QGGVLVFVSGT 223 Q V+V V+GT Sbjct: 99 QPEVMVAVTGT 109
>SODM2_HALSA (P09224) Superoxide dismutase [Mn] 2 (EC 1.15.1.1)| Length = 200 Score = 29.3 bits (64), Expect = 7.0 Identities = 18/79 (22%), Positives = 32/79 (40%) Frame = -2 Query: 483 EAMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQ 304 +A++P + H+ D++ + V E + G A+ AG LG + Sbjct: 14 DALEPHISEQVVTWHH----DTHHQSYVDGLNSAEETLAENRETGDHASTAGALGDVTHN 69 Query: 303 QCQHKIDTVDCQPSGPQGG 247 C H + T+ + P GG Sbjct: 70 GCGHYLHTMFWEHMSPDGG 88
>MURE_BRUSU (Q8FZP0) UDP-N-acetylmuramoylalanyl-D-glutamate--2,| 6-diaminopimelate ligase (EC 6.3.2.13) (UDP-N-acetylmuramyl-tripeptide synthetase) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-tripeptide synthetase) Length = 488 Score = 28.9 bits (63), Expect = 9.1 Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 8/71 (11%) Frame = -2 Query: 411 AALVGLYQDGSMLTFEGEKFGGPAAIAGK--------LGSLPFQQCQHKIDTVDCQPSGP 256 AAL G+ DG++ + K G A IAGK + L +H + Q G Sbjct: 39 AALKGVKADGAVFAADAVKRGAVAIIAGKDTAIADAGVPVLHVDDPRHVLAIAAAQFYGK 98 Query: 255 QGGVLVFVSGT 223 Q V+V V+GT Sbjct: 99 QPEVMVAVTGT 109
>EF2_DEBHA (Q6BJ25) Elongation factor 2 (EF-2)| Length = 842 Score = 28.9 bits (63), Expect = 9.1 Identities = 33/137 (24%), Positives = 52/137 (37%), Gaps = 26/137 (18%) Frame = -2 Query: 522 PNPKRGEARRAE----GEA----------MDPDSVSKAFVQHYYQTFDSNRAALVGLYQD 385 P+P +A RAE G A DP + ++ T D R G Sbjct: 343 PSPVTAQAYRAETLYEGPADDASCIAIKNCDPTADLMVYISKMVPTSDKGRFYAFGRVFA 402 Query: 384 GSMLTFEGEKFGGPAAIAGKLGSLPFQQCQHKI-------DTVDCQPSGPQGGVL----- 241 G++ + + + GP GK L + Q + + +D P+G G++ Sbjct: 403 GTVKSGQKVRIQGPNYQVGKKDDLFVKAIQRTVLMMGRFVEAIDDCPAGNIVGLVGVDQF 462 Query: 240 VFVSGTITTGPGEHPLK 190 + SGTITT H +K Sbjct: 463 LLKSGTITTNEASHNMK 479
>POLG_PEV9U (O41174) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2167 Score = 28.9 bits (63), Expect = 9.1 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = +2 Query: 344 GPPNFSPSKVSMEPSWYSPTSAARLESNV 430 GPP F P K+S++P +P + A L ++V Sbjct: 1413 GPPQFKPLKISVDPEIPAPPAIADLLASV 1441
>PMYT1_MOUSE (Q9ESG9) Membrane-associated tyrosine- and threonine-specific| cdc2-inhibitory kinase (EC 2.7.11.1) (Myt1 kinase) Length = 490 Score = 28.9 bits (63), Expect = 9.1 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 9/50 (18%) Frame = +2 Query: 269 WQSTVSILCWHCWKG--------RDPSLPAMAAGPPNFSPSKVS-MEPSW 391 WQ+ V++LCW W G + P PA G P SP S + SW Sbjct: 374 WQALVTLLCW-LWHGLVHPASWLQPPGPPATPPGSPPCSPLLDSTLSSSW 422 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,560,449 Number of Sequences: 219361 Number of extensions: 1153933 Number of successful extensions: 3910 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 3751 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3901 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4027872870 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
