Clone Name | rbasd23k17 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_483494.1| Oryza sativa (japonica cultivar-group), mRNA Length = 671 Score = 333 bits (168), Expect = 3e-88 Identities = 312/360 (86%) Strand = Plus / Minus Query: 105 ttccttaaccatagttcaggcggaacatgtcattctgcacgtagaagctccctccagctg 164 ||||||||||||||||||| ||||||||||| |||||||| |||||| | |||||||| | Sbjct: 446 ttccttaaccatagttcagacggaacatgtcgttctgcacatagaagttgcctccagcgg 387 Query: 165 gcagcaaatggaacatctgtgagaacttgagggggtgctcgccggggccggtggtgatgg 224 | |||| ||||||||||| ||||||||||||||||||||| ||||||||||| || || Sbjct: 386 gaagcagctggaacatctgggagaacttgagggggtgctcgtcggggccggtgcggaggg 327 Query: 225 tgccggagacgaagacgaggacgccgccctggggccccgagggctggcagtcgacggtat 284 ||||||||||||||||| | ||||||||| |||||||| ||||||||||||||||| | Sbjct: 326 atccggagacgaagacgagcatgccgccctgcggccccgacggctggcagtcgacggtgt 267 Query: 285 cgatcttgtgctggcactgctggaaggggagagatccgagcttgccagcgatggcggcgg 344 ||| | ||| ||||||||| ||||||||| || ||||||||||| ||||||||||||| Sbjct: 266 tgatgtcgtggtggcactgcgcgaaggggagggagccgagcttgccggcgatggcggcgg 207 Query: 345 ggccgccgaacttctcgccctcgaaggtgagcatggagccgtcctggtacagccccacca 404 |||| |||| || ||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 206 cgccgagaaactgctggccctcgaaggtgagcatggacccgtcctggtacagcgacacca 147 Query: 405 gcgcggcgcggttggagtcgaacgtctggtagtagtgctgaacgaacgccttcgacaccg 464 |||| | ||||| | |||||||||| |||||||||||| ||||||||||||| ||||| Sbjct: 146 gcgccggccggttcgtgtcgaacgtccggtagtagtgctccacgaacgccttcgccaccg 87
>dbj|AK119730.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-H12, full insert sequence Length = 672 Score = 333 bits (168), Expect = 3e-88 Identities = 312/360 (86%) Strand = Plus / Minus Query: 105 ttccttaaccatagttcaggcggaacatgtcattctgcacgtagaagctccctccagctg 164 ||||||||||||||||||| ||||||||||| |||||||| |||||| | |||||||| | Sbjct: 447 ttccttaaccatagttcagacggaacatgtcgttctgcacatagaagttgcctccagcgg 388 Query: 165 gcagcaaatggaacatctgtgagaacttgagggggtgctcgccggggccggtggtgatgg 224 | |||| ||||||||||| ||||||||||||||||||||| ||||||||||| || || Sbjct: 387 gaagcagctggaacatctgggagaacttgagggggtgctcgtcggggccggtgcggaggg 328 Query: 225 tgccggagacgaagacgaggacgccgccctggggccccgagggctggcagtcgacggtat 284 ||||||||||||||||| | ||||||||| |||||||| ||||||||||||||||| | Sbjct: 327 atccggagacgaagacgagcatgccgccctgcggccccgacggctggcagtcgacggtgt 268 Query: 285 cgatcttgtgctggcactgctggaaggggagagatccgagcttgccagcgatggcggcgg 344 ||| | ||| ||||||||| ||||||||| || ||||||||||| ||||||||||||| Sbjct: 267 tgatgtcgtggtggcactgcgcgaaggggagggagccgagcttgccggcgatggcggcgg 208 Query: 345 ggccgccgaacttctcgccctcgaaggtgagcatggagccgtcctggtacagccccacca 404 |||| |||| || ||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 207 cgccgagaaactgctggccctcgaaggtgagcatggacccgtcctggtacagcgacacca 148 Query: 405 gcgcggcgcggttggagtcgaacgtctggtagtagtgctgaacgaacgccttcgacaccg 464 |||| | ||||| | |||||||||| |||||||||||| ||||||||||||| ||||| Sbjct: 147 gcgccggccggttcgtgtcgaacgtccggtagtagtgctccacgaacgccttcgccaccg 88
>dbj|AK065141.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002A14, full insert sequence Length = 671 Score = 333 bits (168), Expect = 3e-88 Identities = 312/360 (86%) Strand = Plus / Minus Query: 105 ttccttaaccatagttcaggcggaacatgtcattctgcacgtagaagctccctccagctg 164 ||||||||||||||||||| ||||||||||| |||||||| |||||| | |||||||| | Sbjct: 446 ttccttaaccatagttcagacggaacatgtcgttctgcacatagaagttgcctccagcgg 387 Query: 165 gcagcaaatggaacatctgtgagaacttgagggggtgctcgccggggccggtggtgatgg 224 | |||| ||||||||||| ||||||||||||||||||||| ||||||||||| || || Sbjct: 386 gaagcagctggaacatctgggagaacttgagggggtgctcgtcggggccggtgcggaggg 327 Query: 225 tgccggagacgaagacgaggacgccgccctggggccccgagggctggcagtcgacggtat 284 ||||||||||||||||| | ||||||||| |||||||| ||||||||||||||||| | Sbjct: 326 atccggagacgaagacgagcatgccgccctgcggccccgacggctggcagtcgacggtgt 267 Query: 285 cgatcttgtgctggcactgctggaaggggagagatccgagcttgccagcgatggcggcgg 344 ||| | ||| ||||||||| ||||||||| || ||||||||||| ||||||||||||| Sbjct: 266 tgatgtcgtggtggcactgcgcgaaggggagggagccgagcttgccggcgatggcggcgg 207 Query: 345 ggccgccgaacttctcgccctcgaaggtgagcatggagccgtcctggtacagccccacca 404 |||| |||| || ||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 206 cgccgagaaactgctggccctcgaaggtgagcatggacccgtcctggtacagcgacacca 147 Query: 405 gcgcggcgcggttggagtcgaacgtctggtagtagtgctgaacgaacgccttcgacaccg 464 |||| | ||||| | |||||||||| |||||||||||| ||||||||||||| ||||| Sbjct: 146 gcgccggccggttcgtgtcgaacgtccggtagtagtgctccacgaacgccttcgccaccg 87
>dbj|AB011262.1| Oryza sativa (japonica cultivar-group) mRNA for nuclear transport factor 2 (NTF2), complete cds Length = 661 Score = 333 bits (168), Expect = 3e-88 Identities = 312/360 (86%) Strand = Plus / Minus Query: 105 ttccttaaccatagttcaggcggaacatgtcattctgcacgtagaagctccctccagctg 164 ||||||||||||||||||| ||||||||||| |||||||| |||||| | |||||||| | Sbjct: 436 ttccttaaccatagttcagacggaacatgtcgttctgcacatagaagttgcctccagcgg 377 Query: 165 gcagcaaatggaacatctgtgagaacttgagggggtgctcgccggggccggtggtgatgg 224 | |||| ||||||||||| ||||||||||||||||||||| ||||||||||| || || Sbjct: 376 gaagcagctggaacatctgggagaacttgagggggtgctcgtcggggccggtgcggaggg 317 Query: 225 tgccggagacgaagacgaggacgccgccctggggccccgagggctggcagtcgacggtat 284 ||||||||||||||||| | ||||||||| |||||||| ||||||||||||||||| | Sbjct: 316 atccggagacgaagacgagcatgccgccctgcggccccgacggctggcagtcgacggtgt 257 Query: 285 cgatcttgtgctggcactgctggaaggggagagatccgagcttgccagcgatggcggcgg 344 ||| | ||| ||||||||| ||||||||| || ||||||||||| ||||||||||||| Sbjct: 256 tgatgtcgtggtggcactgcgcgaaggggagggagccgagcttgccggcgatggcggcgg 197 Query: 345 ggccgccgaacttctcgccctcgaaggtgagcatggagccgtcctggtacagccccacca 404 |||| |||| || ||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 196 cgccgagaaactgctggccctcgaaggtgagcatggacccgtcctggtacagcgacacca 137 Query: 405 gcgcggcgcggttggagtcgaacgtctggtagtagtgctgaacgaacgccttcgacaccg 464 |||| | ||||| | |||||||||| |||||||||||| ||||||||||||| ||||| Sbjct: 136 gcgccggccggttcgtgtcgaacgtccggtagtagtgctccacgaacgccttcgccaccg 77
>gb|BT016844.1| Zea mays clone Contig677 mRNA sequence Length = 683 Score = 293 bits (148), Expect = 3e-76 Identities = 301/352 (85%) Strand = Plus / Plus Query: 113 ccatagttcaggcggaacatgtcattctgcacgtagaagctccctccagctggcagcaaa 172 ||||||||||||||||||||||||||||||||| ||||| ||| | || ||||||||| Sbjct: 244 ccatagttcaggcggaacatgtcattctgcacgaagaaggacccagctgccggcagcaaa 303 Query: 173 tggaacatctgtgagaacttgagggggtgctcgccggggccggtggtgatggtgccggag 232 ||||| ||| |||||||||| ||||||||| ||||||||||| ||||| |||||| Sbjct: 304 tggaatgcctgagagaacttgatggggtgctcctcggggccggtgcggatggaaccggag 363 Query: 233 acgaagacgaggacgccgccctggggccccgagggctggcagtcgacggtatcgatcttg 292 ||||||||||| | ||| |||||||||||||| ||||||||||| ||||| |||||| | Sbjct: 364 acgaagacgagcatgcctccctggggccccgacggctggcagtctacggtgacgatctgg 423 Query: 293 tgctggcactgctggaaggggagagatccgagcttgccagcgatggcggcggggccgccg 352 |||| ||| ||||||||| ||||||||||||||||| || ||||||| ||||| | Sbjct: 424 tgctcgcaggcctggaagggaagagatccgagcttgccggcaatggcggatgggccctgg 483 Query: 353 aacttctcgccctcgaaggtgagcatggagccgtcctggtacagccccaccagcgcggcg 412 ||||||| |||||||||||||||||||||| ||||| ||||||||||||||||| ||| Sbjct: 484 aacttctggccctcgaaggtgagcatggaggtctcctgatacagccccaccagcgccgcg 543 Query: 413 cggttggagtcgaacgtctggtagtagtgctgaacgaacgccttcgacaccg 464 ||||||| |||||||||| |||||||||||| ||||| || |||| ||||| Sbjct: 544 cggttggtgtcgaacgtccggtagtagtgctccacgaaggctttcgccaccg 595
>gb|AY103892.1| Zea mays PCO098900 mRNA sequence Length = 855 Score = 293 bits (148), Expect = 3e-76 Identities = 301/352 (85%) Strand = Plus / Minus Query: 113 ccatagttcaggcggaacatgtcattctgcacgtagaagctccctccagctggcagcaaa 172 ||||||||||||||||||||||||||||||||| ||||| ||| | || ||||||||| Sbjct: 539 ccatagttcaggcggaacatgtcattctgcacgaagaaggacccagctgccggcagcaaa 480 Query: 173 tggaacatctgtgagaacttgagggggtgctcgccggggccggtggtgatggtgccggag 232 ||||| ||| |||||||||| ||||||||| ||||||||||| ||||| |||||| Sbjct: 479 tggaatgcctgagagaacttgatggggtgctcctcggggccggtgcggatggaaccggag 420 Query: 233 acgaagacgaggacgccgccctggggccccgagggctggcagtcgacggtatcgatcttg 292 ||||||||||| | ||| |||||||||||||| ||||||||||||||||| | |||| | Sbjct: 419 acgaagacgagcatgcctccctggggccccgacggctggcagtcgacggtgacaatctgg 360 Query: 293 tgctggcactgctggaaggggagagatccgagcttgccagcgatggcggcggggccgccg 352 |||| ||| ||||||||| ||||||||||||||||| || ||||||| ||||| | Sbjct: 359 tgctcgcaggcctggaagggaagagatccgagcttgccggcaatggcggatgggccctgg 300 Query: 353 aacttctcgccctcgaaggtgagcatggagccgtcctggtacagccccaccagcgcggcg 412 ||||||| |||||||||||||||||||||| ||||| ||||||||||||||||| ||| Sbjct: 299 aacttctggccctcgaaggtgagcatggaggtctcctgatacagccccaccagcgccgcg 240 Query: 413 cggttggagtcgaacgtctggtagtagtgctgaacgaacgccttcgacaccg 464 ||||||| |||||||||| |||||||||||| ||||| || |||| ||||| Sbjct: 239 cggttggtgtcgaacgtccggtagtagtgctccacgaaggctttcgccaccg 188
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 254 bits (128), Expect = 3e-64 Identities = 242/280 (86%) Strand = Plus / Plus Query: 185 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 244 ||||||||||||||||||||| ||||||||||| || || ||||||||||||||||| Sbjct: 26529694 gagaacttgagggggtgctcgtcggggccggtgcggagggatccggagacgaagacgagc 26529753 Query: 245 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 304 | ||||||||| |||||||| ||||||||||||||||| | ||| | ||| ||||||||| Sbjct: 26529754 atgccgccctgcggccccgacggctggcagtcgacggtgttgatgtcgtggtggcactgc 26529813 Query: 305 tggaaggggagagatccgagcttgccagcgatggcggcggggccgccgaacttctcgccc 364 ||||||||| || ||||||||||| ||||||||||||| |||| |||| || |||| Sbjct: 26529814 gcgaaggggagggagccgagcttgccggcgatggcggcggcgccgagaaactgctggccc 26529873 Query: 365 tcgaaggtgagcatggagccgtcctggtacagccccaccagcgcggcgcggttggagtcg 424 ||||||||||||||||| ||||||||||||||| ||||||||| | ||||| | |||| Sbjct: 26529874 tcgaaggtgagcatggacccgtcctggtacagcgacaccagcgccggccggttcgtgtcg 26529933 Query: 425 aacgtctggtagtagtgctgaacgaacgccttcgacaccg 464 |||||| |||||||||||| ||||||||||||| ||||| Sbjct: 26529934 aacgtccggtagtagtgctccacgaacgccttcgccaccg 26529973 Score = 87.7 bits (44), Expect = 3e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 105 ttccttaaccatagttcaggcggaacatgtcattctgcacgtagaagctccctccagctg 164 ||||||||||||||||||| ||||||||||| |||||||| |||||| | |||||||| | Sbjct: 26528204 ttccttaaccatagttcagacggaacatgtcgttctgcacatagaagttgcctccagcgg 26528263 Query: 165 gcagcaaatggaacatctgt 184 | |||| |||||||||||| Sbjct: 26528264 gaagcagctggaacatctgt 26528283
>dbj|AP005529.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0702E04 Length = 190948 Score = 254 bits (128), Expect = 3e-64 Identities = 242/280 (86%) Strand = Plus / Plus Query: 185 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 244 ||||||||||||||||||||| ||||||||||| || || ||||||||||||||||| Sbjct: 78561 gagaacttgagggggtgctcgtcggggccggtgcggagggatccggagacgaagacgagc 78620 Query: 245 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 304 | ||||||||| |||||||| ||||||||||||||||| | ||| | ||| ||||||||| Sbjct: 78621 atgccgccctgcggccccgacggctggcagtcgacggtgttgatgtcgtggtggcactgc 78680 Query: 305 tggaaggggagagatccgagcttgccagcgatggcggcggggccgccgaacttctcgccc 364 ||||||||| || ||||||||||| ||||||||||||| |||| |||| || |||| Sbjct: 78681 gcgaaggggagggagccgagcttgccggcgatggcggcggcgccgagaaactgctggccc 78740 Query: 365 tcgaaggtgagcatggagccgtcctggtacagccccaccagcgcggcgcggttggagtcg 424 ||||||||||||||||| ||||||||||||||| ||||||||| | ||||| | |||| Sbjct: 78741 tcgaaggtgagcatggacccgtcctggtacagcgacaccagcgccggccggttcgtgtcg 78800 Query: 425 aacgtctggtagtagtgctgaacgaacgccttcgacaccg 464 |||||| |||||||||||| ||||||||||||| ||||| Sbjct: 78801 aacgtccggtagtagtgctccacgaacgccttcgccaccg 78840 Score = 87.7 bits (44), Expect = 3e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 105 ttccttaaccatagttcaggcggaacatgtcattctgcacgtagaagctccctccagctg 164 ||||||||||||||||||| ||||||||||| |||||||| |||||| | |||||||| | Sbjct: 77071 ttccttaaccatagttcagacggaacatgtcgttctgcacatagaagttgcctccagcgg 77130 Query: 165 gcagcaaatggaacatctgt 184 | |||| |||||||||||| Sbjct: 77131 gaagcagctggaacatctgt 77150
>gb|DQ427497.1| Sorghum propinquum locus CSU608 genomic sequence Length = 676 Score = 210 bits (106), Expect = 3e-51 Identities = 166/186 (89%) Strand = Plus / Minus Query: 185 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 244 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 245 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 304 ||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggccccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 305 tggaaggggagagatccgagcttgccagcgatggcggcggggccgccgaacttctcgccc 364 |||||||||||||||||||||||||| || |||||||||||||| |||||| | |||| Sbjct: 66 tggaaggggagagatccgagcttgccggcaatggcggcggggccctggaacttatggccc 7 Query: 365 tcgaag 370 |||||| Sbjct: 6 tcgaag 1
>gb|DQ427496.1| Sorghum bicolor voucher PI585454 locus CSU608 genomic sequence Length = 679 Score = 202 bits (102), Expect = 8e-49 Identities = 165/186 (88%) Strand = Plus / Minus Query: 185 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 244 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 245 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 304 ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggtcccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 305 tggaaggggagagatccgagcttgccagcgatggcggcggggccgccgaacttctcgccc 364 |||||||||||||||||||||||||| || |||||||||||||| |||||| | |||| Sbjct: 66 tggaaggggagagatccgagcttgccggcaatggcggcggggccctggaacttatggccc 7 Query: 365 tcgaag 370 |||||| Sbjct: 6 tcgaag 1
>gb|DQ427495.1| Sorghum bicolor voucher PI267539b locus CSU608 genomic sequence Length = 679 Score = 202 bits (102), Expect = 8e-49 Identities = 165/186 (88%) Strand = Plus / Minus Query: 185 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 244 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 245 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 304 ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggtcccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 305 tggaaggggagagatccgagcttgccagcgatggcggcggggccgccgaacttctcgccc 364 |||||||||||||||||||||||||| || |||||||||||||| |||||| | |||| Sbjct: 66 tggaaggggagagatccgagcttgccggcaatggcggcggggccctggaacttatggccc 7 Query: 365 tcgaag 370 |||||| Sbjct: 6 tcgaag 1
>gb|DQ427494.1| Sorghum bicolor voucher PI267539a locus CSU608 genomic sequence Length = 679 Score = 202 bits (102), Expect = 8e-49 Identities = 165/186 (88%) Strand = Plus / Minus Query: 185 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 244 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 245 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 304 ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggtcccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 305 tggaaggggagagatccgagcttgccagcgatggcggcggggccgccgaacttctcgccc 364 |||||||||||||||||||||||||| || |||||||||||||| |||||| | |||| Sbjct: 66 tggaaggggagagatccgagcttgccggcaatggcggcggggccctggaacttatggccc 7 Query: 365 tcgaag 370 |||||| Sbjct: 6 tcgaag 1
>gb|DQ427493.1| Sorghum bicolor voucher PI267408 locus CSU608 genomic sequence Length = 679 Score = 202 bits (102), Expect = 8e-49 Identities = 165/186 (88%) Strand = Plus / Minus Query: 185 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 244 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 245 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 304 ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggtcccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 305 tggaaggggagagatccgagcttgccagcgatggcggcggggccgccgaacttctcgccc 364 |||||||||||||||||||||||||| || |||||||||||||| |||||| | |||| Sbjct: 66 tggaaggggagagatccgagcttgccggcaatggcggcggggccctggaacttatggccc 7 Query: 365 tcgaag 370 |||||| Sbjct: 6 tcgaag 1
>gb|DQ427492.1| Sorghum bicolor voucher PI221607 locus CSU608 genomic sequence Length = 679 Score = 202 bits (102), Expect = 8e-49 Identities = 165/186 (88%) Strand = Plus / Minus Query: 185 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 244 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 245 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 304 ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggtcccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 305 tggaaggggagagatccgagcttgccagcgatggcggcggggccgccgaacttctcgccc 364 |||||||||||||||||||||||||| || |||||||||||||| |||||| | |||| Sbjct: 66 tggaaggggagagatccgagcttgccggcaatggcggcggggccctggaacttatggccc 7 Query: 365 tcgaag 370 |||||| Sbjct: 6 tcgaag 1
>gb|DQ427491.1| Sorghum bicolor voucher PI152702 locus CSU608 genomic sequence Length = 679 Score = 202 bits (102), Expect = 8e-49 Identities = 165/186 (88%) Strand = Plus / Minus Query: 185 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 244 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 245 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 304 ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggtcccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 305 tggaaggggagagatccgagcttgccagcgatggcggcggggccgccgaacttctcgccc 364 |||||||||||||||||||||||||| || |||||||||||||| |||||| | |||| Sbjct: 66 tggaaggggagagatccgagcttgccggcaatggcggcggggccctggaacttatggccc 7 Query: 365 tcgaag 370 |||||| Sbjct: 6 tcgaag 1
>gb|DQ427490.1| Sorghum bicolor voucher NSL92371 locus CSU608 genomic sequence Length = 679 Score = 202 bits (102), Expect = 8e-49 Identities = 165/186 (88%) Strand = Plus / Minus Query: 185 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 244 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 245 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 304 ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggtcccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 305 tggaaggggagagatccgagcttgccagcgatggcggcggggccgccgaacttctcgccc 364 |||||||||||||||||||||||||| || |||||||||||||| |||||| | |||| Sbjct: 66 tggaaggggagagatccgagcttgccggcaatggcggcggggccctggaacttatggccc 7 Query: 365 tcgaag 370 |||||| Sbjct: 6 tcgaag 1
>gb|DQ427489.1| Sorghum bicolor voucher NSL87902 locus CSU608 genomic sequence Length = 679 Score = 202 bits (102), Expect = 8e-49 Identities = 165/186 (88%) Strand = Plus / Minus Query: 185 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 244 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 245 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 304 ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggtcccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 305 tggaaggggagagatccgagcttgccagcgatggcggcggggccgccgaacttctcgccc 364 |||||||||||||||||||||||||| || |||||||||||||| |||||| | |||| Sbjct: 66 tggaaggggagagatccgagcttgccggcaatggcggcggggccctggaacttatggccc 7 Query: 365 tcgaag 370 |||||| Sbjct: 6 tcgaag 1
>gb|DQ427488.1| Sorghum bicolor voucher NSL87666 locus CSU608 genomic sequence Length = 679 Score = 202 bits (102), Expect = 8e-49 Identities = 165/186 (88%) Strand = Plus / Minus Query: 185 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 244 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 245 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 304 ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggtcccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 305 tggaaggggagagatccgagcttgccagcgatggcggcggggccgccgaacttctcgccc 364 |||||||||||||||||||||||||| || |||||||||||||| |||||| | |||| Sbjct: 66 tggaaggggagagatccgagcttgccggcaatggcggcggggccctggaacttatggccc 7 Query: 365 tcgaag 370 |||||| Sbjct: 6 tcgaag 1
>gb|DQ427487.1| Sorghum bicolor voucher NSL77217 locus CSU608 genomic sequence Length = 679 Score = 202 bits (102), Expect = 8e-49 Identities = 165/186 (88%) Strand = Plus / Minus Query: 185 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 244 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 245 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 304 ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggtcccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 305 tggaaggggagagatccgagcttgccagcgatggcggcggggccgccgaacttctcgccc 364 |||||||||||||||||||||||||| || |||||||||||||| |||||| | |||| Sbjct: 66 tggaaggggagagatccgagcttgccggcaatggcggcggggccctggaacttatggccc 7 Query: 365 tcgaag 370 |||||| Sbjct: 6 tcgaag 1
>gb|DQ427486.1| Sorghum bicolor voucher NSL77034 locus CSU608 genomic sequence Length = 679 Score = 202 bits (102), Expect = 8e-49 Identities = 165/186 (88%) Strand = Plus / Minus Query: 185 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 244 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 245 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 304 ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggtcccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 305 tggaaggggagagatccgagcttgccagcgatggcggcggggccgccgaacttctcgccc 364 |||||||||||||||||||||||||| || |||||||||||||| |||||| | |||| Sbjct: 66 tggaaggggagagatccgagcttgccggcaatggcggcggggccctggaacttatggccc 7 Query: 365 tcgaag 370 |||||| Sbjct: 6 tcgaag 1
>gb|DQ427485.1| Sorghum bicolor voucher NSL56174 locus CSU608 genomic sequence Length = 679 Score = 202 bits (102), Expect = 8e-49 Identities = 165/186 (88%) Strand = Plus / Minus Query: 185 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 244 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 245 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 304 ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggtcccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 305 tggaaggggagagatccgagcttgccagcgatggcggcggggccgccgaacttctcgccc 364 |||||||||||||||||||||||||| || |||||||||||||| |||||| | |||| Sbjct: 66 tggaaggggagagatccgagcttgccggcaatggcggcggggccctggaacttatggccc 7 Query: 365 tcgaag 370 |||||| Sbjct: 6 tcgaag 1
>gb|DQ427484.1| Sorghum bicolor voucher NSL56003 locus CSU608 genomic sequence Length = 679 Score = 202 bits (102), Expect = 8e-49 Identities = 165/186 (88%) Strand = Plus / Minus Query: 185 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 244 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 245 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 304 ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggtcccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 305 tggaaggggagagatccgagcttgccagcgatggcggcggggccgccgaacttctcgccc 364 |||||||||||||||||||||||||| || |||||||||||||| |||||| | |||| Sbjct: 66 tggaaggggagagatccgagcttgccggcaatggcggcggggccctggaacttatggccc 7 Query: 365 tcgaag 370 |||||| Sbjct: 6 tcgaag 1
>gb|DQ427483.1| Sorghum bicolor voucher NSL55243 locus CSU608 genomic sequence Length = 679 Score = 202 bits (102), Expect = 8e-49 Identities = 165/186 (88%) Strand = Plus / Minus Query: 185 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 244 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 245 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 304 ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggtcccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 305 tggaaggggagagatccgagcttgccagcgatggcggcggggccgccgaacttctcgccc 364 |||||||||||||||||||||||||| || |||||||||||||| |||||| | |||| Sbjct: 66 tggaaggggagagatccgagcttgccggcaatggcggcggggccctggaacttatggccc 7 Query: 365 tcgaag 370 |||||| Sbjct: 6 tcgaag 1
>gb|DQ427482.1| Sorghum bicolor voucher NSL51365 locus CSU608 genomic sequence Length = 679 Score = 202 bits (102), Expect = 8e-49 Identities = 165/186 (88%) Strand = Plus / Minus Query: 185 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 244 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 245 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 304 ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggtcccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 305 tggaaggggagagatccgagcttgccagcgatggcggcggggccgccgaacttctcgccc 364 |||||||||||||||||||||||||| || |||||||||||||| |||||| | |||| Sbjct: 66 tggaaggggagagatccgagcttgccggcaatggcggcggggccctggaacttatggccc 7 Query: 365 tcgaag 370 |||||| Sbjct: 6 tcgaag 1
>gb|DQ427481.1| Sorghum bicolor voucher NSL51030 locus CSU608 genomic sequence Length = 679 Score = 202 bits (102), Expect = 8e-49 Identities = 165/186 (88%) Strand = Plus / Minus Query: 185 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 244 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 245 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 304 ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggtcccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 305 tggaaggggagagatccgagcttgccagcgatggcggcggggccgccgaacttctcgccc 364 |||||||||||||||||||||||||| || |||||||||||||| |||||| | |||| Sbjct: 66 tggaaggggagagatccgagcttgccggcaatggcggcggggccctggaacttatggccc 7 Query: 365 tcgaag 370 |||||| Sbjct: 6 tcgaag 1
>gb|DQ427480.1| Sorghum bicolor voucher NSL50875 locus CSU608 genomic sequence Length = 679 Score = 202 bits (102), Expect = 8e-49 Identities = 165/186 (88%) Strand = Plus / Minus Query: 185 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 244 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 245 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 304 ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggtcccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 305 tggaaggggagagatccgagcttgccagcgatggcggcggggccgccgaacttctcgccc 364 |||||||||||||||||||||||||| || |||||||||||||| |||||| | |||| Sbjct: 66 tggaaggggagagatccgagcttgccggcaatggcggcggggccctggaacttatggccc 7 Query: 365 tcgaag 370 |||||| Sbjct: 6 tcgaag 1
>gb|DQ427479.1| Sorghum bicolor voucher BTx623 locus CSU608 genomic sequence Length = 679 Score = 202 bits (102), Expect = 8e-49 Identities = 165/186 (88%) Strand = Plus / Minus Query: 185 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 244 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 245 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 304 ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggtcccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 305 tggaaggggagagatccgagcttgccagcgatggcggcggggccgccgaacttctcgccc 364 |||||||||||||||||||||||||| || |||||||||||||| |||||| | |||| Sbjct: 66 tggaaggggagagatccgagcttgccggcaatggcggcggggccctggaacttatggccc 7 Query: 365 tcgaag 370 |||||| Sbjct: 6 tcgaag 1
>ref|NM_190845.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 441 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 404 agcgcggcgcggttggagtcgaacgtctggtagtagt 440 |||||||||||||||| |||||||||||||||||||| Sbjct: 140 agcgcggcgcggttggtgtcgaacgtctggtagtagt 104 Score = 44.1 bits (22), Expect = 0.46 Identities = 34/38 (89%) Strand = Plus / Minus Query: 116 tagttcaggcggaacatgtcattctgcacgtagaagct 153 ||||| || ||||| ||||||||||||||| ||||||| Sbjct: 434 tagttgagccggaatatgtcattctgcacgaagaagct 397
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 404 agcgcggcgcggttggagtcgaacgtctggtagtagt 440 |||||||||||||||| |||||||||||||||||||| Sbjct: 33441870 agcgcggcgcggttggtgtcgaacgtctggtagtagt 33441834 Score = 44.1 bits (22), Expect = 0.46 Identities = 34/38 (89%) Strand = Plus / Minus Query: 116 tagttcaggcggaacatgtcattctgcacgtagaagct 153 ||||| || ||||| ||||||||||||||| ||||||| Sbjct: 33442288 tagttgagccggaatatgtcattctgcacgaagaagct 33442251
>dbj|AP003345.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0415A04 Length = 160669 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 404 agcgcggcgcggttggagtcgaacgtctggtagtagt 440 |||||||||||||||| |||||||||||||||||||| Sbjct: 118036 agcgcggcgcggttggtgtcgaacgtctggtagtagt 118000 Score = 44.1 bits (22), Expect = 0.46 Identities = 34/38 (89%) Strand = Plus / Minus Query: 116 tagttcaggcggaacatgtcattctgcacgtagaagct 153 ||||| || ||||| ||||||||||||||| ||||||| Sbjct: 118454 tagttgagccggaatatgtcattctgcacgaagaagct 118417
>dbj|AK098941.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013046E12, full insert sequence Length = 729 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 404 agcgcggcgcggttggagtcgaacgtctggtagtagt 440 |||||||||||||||| |||||||||||||||||||| Sbjct: 216 agcgcggcgcggttggtgtcgaacgtctggtagtagt 180 Score = 44.1 bits (22), Expect = 0.46 Identities = 34/38 (89%) Strand = Plus / Minus Query: 116 tagttcaggcggaacatgtcattctgcacgtagaagct 153 ||||| || ||||| ||||||||||||||| ||||||| Sbjct: 510 tagttgagccggaatatgtcattctgcacgaagaagct 473
>dbj|AK073030.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023144D17, full insert sequence Length = 754 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 404 agcgcggcgcggttggagtcgaacgtctggtagtagt 440 |||||||||||||||| |||||||||||||||||||| Sbjct: 221 agcgcggcgcggttggtgtcgaacgtctggtagtagt 185 Score = 44.1 bits (22), Expect = 0.46 Identities = 34/38 (89%) Strand = Plus / Minus Query: 116 tagttcaggcggaacatgtcattctgcacgtagaagct 153 ||||| || ||||| ||||||||||||||| ||||||| Sbjct: 515 tagttgagccggaatatgtcattctgcacgaagaagct 478
>gb|AY106921.1| Zea mays PCO069699 mRNA sequence Length = 785 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 228 cggagacgaagacgaggacgccg 250 ||||||||||||||||||||||| Sbjct: 598 cggagacgaagacgaggacgccg 576
>gb|AY705500.1| Coffea canephora x Coffea congensis microsatellite CofEST-SSR05 sequence Length = 733 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Minus Query: 286 gatcttgtgctggcactgctggaaggggag 315 ||||| ||| |||||||||||||||||||| Sbjct: 305 gatctggtggtggcactgctggaaggggag 276
>emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete genome; segment 1/29 Length = 299050 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 211 gccggtggtgatggtgccggag 232 |||||||||||||||||||||| Sbjct: 88027 gccggtggtgatggtgccggag 88048
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 490 tgcgcgccgcgcctcgcctcgc 511 |||||||||||||||||||||| Sbjct: 17766062 tgcgcgccgcgcctcgcctcgc 17766041
>dbj|AP004743.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0026G06 Length = 123129 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 490 tgcgcgccgcgcctcgcctcgc 511 |||||||||||||||||||||| Sbjct: 36484 tgcgcgccgcgcctcgcctcgc 36463
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 402 ccagcgcggcgcggttggagtcgaac 427 |||||||||||||| ||||||||||| Sbjct: 1936890 ccagcgcggcgcgggtggagtcgaac 1936865
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 243 ggacgccgccctggggccccga 264 |||||||||||||||||||||| Sbjct: 2162280 ggacgccgccctggggccccga 2162259
>gb|AY857192.1| Uncultured bacterium clone xyl1 xylanase gene, partial cds Length = 432 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 211 gccggtggtgatggtgccggag 232 |||||||||||||||||||||| Sbjct: 414 gccggtggtgatggtgccggag 393
>gb|M64553.1|STMXLNC Streptomyces lividans xylanase C (xlnC) gene, complete cds Length = 1008 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 211 gccggtggtgatggtgccggag 232 |||||||||||||||||||||| Sbjct: 816 gccggtggtgatggtgccggag 795
>gb|AC098833.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1288_A07, complete sequence Length = 122120 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 492 cgcgccgcgcctcgcctcgct 512 ||||||||||||||||||||| Sbjct: 31035 cgcgccgcgcctcgcctcgct 31015
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 222 tggtgccggagacgaagacga 242 ||||||||||||||||||||| Sbjct: 957882 tggtgccggagacgaagacga 957902
>emb|X81045.1|SSXLNG Streptomyces sp. xln gene for xylanase Length = 1080 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 212 ccggtggtgatggtgccggag 232 ||||||||||||||||||||| Sbjct: 682 ccggtggtgatggtgccggag 662
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 492 cgcgccgcgcctcgcctcgct 512 ||||||||||||||||||||| Sbjct: 26749096 cgcgccgcgcctcgcctcgct 26749076
>dbj|AK065138.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002A10, full insert sequence Length = 1899 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 492 cgcgccgcgcctcgcctcgct 512 ||||||||||||||||||||| Sbjct: 26 cgcgccgcgcctcgcctcgct 46
>ref|XM_467915.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1245 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 cgcgccgcgcctcgcctcgc 511 |||||||||||||||||||| Sbjct: 1 cgcgccgcgcctcgcctcgc 20
>ref|XM_478510.1| Oryza sativa (japonica cultivar-group), mRNA Length = 222 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 cgcgccgcgcctcgcctcgc 511 |||||||||||||||||||| Sbjct: 93 cgcgccgcgcctcgcctcgc 112
>ref|XM_470684.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1740 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 ggagacgaagacgaggacgc 248 |||||||||||||||||||| Sbjct: 378 ggagacgaagacgaggacgc 359
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 cttgccagcgatggcggcgg 344 |||||||||||||||||||| Sbjct: 3859271 cttgccagcgatggcggcgg 3859252
>gb|AC079632.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0046L02, complete sequence Length = 142381 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 cgcgccgcgcctcgcctcgc 511 |||||||||||||||||||| Sbjct: 124813 cgcgccgcgcctcgcctcgc 124794
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 491 gcgcgccgcgcctcgcctcg 510 |||||||||||||||||||| Sbjct: 2296691 gcgcgccgcgcctcgcctcg 2296710
>gb|AY456696.1| Arthrobacter aurescens strain TC1 plasmid pAA1 atrazine catabolic region, partial sequence Length = 161264 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 213 cggtggtgatggtgccggagacgaagacgagg 244 ||||| ||||| |||||||||||| ||||||| Sbjct: 48944 cggtgttgatgatgccggagacgacgacgagg 48975
>gb|AC147679.13| Canis Familiaris, clone XX-10F3, complete sequence Length = 193944 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 cgcgccgcgcctcgcctcgc 511 |||||||||||||||||||| Sbjct: 164454 cgcgccgcgcctcgcctcgc 164473
>ref|NM_009058.1| Mus musculus ral guanine nucleotide dissociation stimulator (Ralgds), mRNA Length = 3573 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 cgcgccgcgcctcgcctcgc 511 |||||||||||||||||||| Sbjct: 26 cgcgccgcgcctcgcctcgc 7
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 ggagacgaagacgaggacgc 248 |||||||||||||||||||| Sbjct: 14530103 ggagacgaagacgaggacgc 14530122 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 cgcgccgcgcctcgcctcgc 511 |||||||||||||||||||| Sbjct: 12919926 cgcgccgcgcctcgcctcgc 12919945 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 223 ggtgccggagacgaagacgaggacgccg 250 ||||||||||| ||||| |||||||||| Sbjct: 5292552 ggtgccggagaagaagaggaggacgccg 5292525
>ref|XM_976817.1| PREDICTED: Mus musculus hypothetical protein LOC665422 (LOC665422), mRNA Length = 435 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 cgcgccgcgcctcgcctcgc 511 |||||||||||||||||||| Sbjct: 217 cgcgccgcgcctcgcctcgc 236
>ref|XM_977027.1| PREDICTED: Mus musculus hypothetical protein LOC669769 (LOC669769), mRNA Length = 435 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 cgcgccgcgcctcgcctcgc 511 |||||||||||||||||||| Sbjct: 217 cgcgccgcgcctcgcctcgc 236
>emb|CT010368.1| Mus musculus full open reading frame cDNA clone RZPDo836C0153D for gene Cd7, CD7 antigen; complete cds, incl. stopcodon Length = 633 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 aagctccctccagctggcag 168 |||||||||||||||||||| Sbjct: 294 aagctccctccagctggcag 313
>gb|BC024376.1| Mus musculus CD7 antigen, mRNA (cDNA clone MGC:36025 IMAGE:4985794), complete cds Length = 1023 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 aagctccctccagctggcag 168 |||||||||||||||||||| Sbjct: 348 aagctccctccagctggcag 367
>gb|AC146581.1| Oryza sativa (japonica cultivar-group) Nipponbare strain chromosome 3 clone OSJNBa0021H20, complete sequence Length = 133079 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 223 ggtgccggagacgaagacgaggacgccg 250 ||||||||||| ||||| |||||||||| Sbjct: 115954 ggtgccggagaagaagaggaggacgccg 115927
>emb|BX511035.7| Human DNA sequence from clone RP11-435J19 on chromosome 22, complete sequence Length = 70823 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 tccctccagctggcagcaaa 172 |||||||||||||||||||| Sbjct: 12623 tccctccagctggcagcaaa 12604
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 cgcgccgcgcctcgcctcgc 511 |||||||||||||||||||| Sbjct: 138919 cgcgccgcgcctcgcctcgc 138900
>gb|AC084765.9| Oryza sativa chromosome 3 BAC OSJNBa0090L05 genomic sequence, complete sequence Length = 147130 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 ggagacgaagacgaggacgc 248 |||||||||||||||||||| Sbjct: 127608 ggagacgaagacgaggacgc 127589
>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16 Length = 349142 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 338 gcggcggggccgccgaacttctcg 361 |||||| ||||||||||||||||| Sbjct: 129861 gcggcgcggccgccgaacttctcg 129884
>gb|AC118675.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0094H06, from chromosome 3, complete sequence Length = 118075 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 cgcgccgcgcctcgcctcgc 511 |||||||||||||||||||| Sbjct: 19583 cgcgccgcgcctcgcctcgc 19564
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cggagacgaagacgaggacg 247 |||||||||||||||||||| Sbjct: 4198962 cggagacgaagacgaggacg 4198943
>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 Length = 1841713 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 tgatggtgccggagacgaag 238 |||||||||||||||||||| Sbjct: 1666822 tgatggtgccggagacgaag 1666841
>dbj|AK141959.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130075H07 product:ral guanine nucleotide dissociation stimulator, full insert sequence Length = 3569 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 cgcgccgcgcctcgcctcgc 511 |||||||||||||||||||| Sbjct: 57 cgcgccgcgcctcgcctcgc 38
>dbj|AK136444.1| Mus musculus adult male colon cDNA, RIKEN full-length enriched library, clone:9030224E03 product:CD7 antigen, full insert sequence Length = 989 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 aagctccctccagctggcag 168 |||||||||||||||||||| Sbjct: 361 aagctccctccagctggcag 380
>gb|AC025882.7| Homo sapiens chromosome 17, clone RP11-445F12, complete sequence Length = 181991 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 cactgctggaaggggagaga 318 |||||||||||||||||||| Sbjct: 50900 cactgctggaaggggagaga 50881
>dbj|AK154339.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630021M03 product:CD7 antigen, full insert sequence Length = 990 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 aagctccctccagctggcag 168 |||||||||||||||||||| Sbjct: 362 aagctccctccagctggcag 381
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 cgcgccgcgcctcgcctcgc 511 |||||||||||||||||||| Sbjct: 138919 cgcgccgcgcctcgcctcgc 138900
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 cgcgccgcgcctcgcctcgc 511 |||||||||||||||||||| Sbjct: 20660604 cgcgccgcgcctcgcctcgc 20660585 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 cgcgccgcgcctcgcctcgc 511 |||||||||||||||||||| Sbjct: 4370696 cgcgccgcgcctcgcctcgc 4370715
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 ggagacgaagacgaggacgc 248 |||||||||||||||||||| Sbjct: 14525074 ggagacgaagacgaggacgc 14525093 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 cgcgccgcgcctcgcctcgc 511 |||||||||||||||||||| Sbjct: 12916689 cgcgccgcgcctcgcctcgc 12916708 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 223 ggtgccggagacgaagacgaggacgccg 250 ||||||||||| ||||| |||||||||| Sbjct: 5291767 ggtgccggagaagaagaggaggacgccg 5291740
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 cgcgccgcgcctcgcctcgc 511 |||||||||||||||||||| Sbjct: 32057427 cgcgccgcgcctcgcctcgc 32057446
>gb|AC012368.6| Homo sapiens BAC clone RP11-547M24 from 2, complete sequence Length = 196206 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 gatggcggcggggccgccga 353 |||||||||||||||||||| Sbjct: 118180 gatggcggcggggccgccga 118161
>dbj|D31956.2| Mus musculus mCD7 gene for CD7 antigen, complete cds Length = 2883 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 aagctccctccagctggcag 168 |||||||||||||||||||| Sbjct: 1496 aagctccctccagctggcag 1515
>gb|AC087220.9| Oryza sativa chromosome 3 BAC OSJNBb0097F01 genomic sequence, complete sequence Length = 135594 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 ggagacgaagacgaggacgc 248 |||||||||||||||||||| Sbjct: 11282 ggagacgaagacgaggacgc 11263
>gb|AC104429.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006P09, complete sequence Length = 153950 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 223 ggtgccggagacgaagacgaggacgccg 250 ||||||||||| ||||| |||||||||| Sbjct: 13715 ggtgccggagaagaagaggaggacgccg 13688
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 accagcgcggcgcggttgga 420 |||||||||||||||||||| Sbjct: 489697 accagcgcggcgcggttgga 489716
>dbj|AP003835.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1506_G02 Length = 106742 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 cgcgccgcgcctcgcctcgc 511 |||||||||||||||||||| Sbjct: 10545 cgcgccgcgcctcgcctcgc 10564
>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0681F05 Length = 144741 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 cgcgccgcgcctcgcctcgc 511 |||||||||||||||||||| Sbjct: 13354 cgcgccgcgcctcgcctcgc 13335
>dbj|AP004159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1175_B01 Length = 96191 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 cgcgccgcgcctcgcctcgc 511 |||||||||||||||||||| Sbjct: 77802 cgcgccgcgcctcgcctcgc 77821
>dbj|AK129328.1| Mus musculus mRNA for mKIAA1308 protein Length = 3590 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 cgcgccgcgcctcgcctcgc 511 |||||||||||||||||||| Sbjct: 31 cgcgccgcgcctcgcctcgc 12
>dbj|D00906.1|NVMV2 Nicotiana velutina mosaic virus gene for capsid protein and membrane proteins, complete cds Length = 2325 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 ctgatcaagttctttgctgc 90 |||||||||||||||||||| Sbjct: 250 ctgatcaagttctttgctgc 231
>gb|AC154677.2| Mus musculus BAC clone RP24-299I4 from chromosome 14, complete sequence Length = 149259 Score = 40.1 bits (20), Expect = 7.2 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 286 gatcttgtgctggcactg-ctggaaggg 312 |||||||||||||||||| ||||||||| Sbjct: 81869 gatcttgtgctggcactgactggaaggg 81842
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 cgcgccgcgcctcgcctcgc 511 |||||||||||||||||||| Sbjct: 138917 cgcgccgcgcctcgcctcgc 138898
>ref|NM_009854.1| Mus musculus CD7 antigen (Cd7), mRNA Length = 978 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 aagctccctccagctggcag 168 |||||||||||||||||||| Sbjct: 347 aagctccctccagctggcag 366
>gb|U23462.1|MMU23462 Mus musculus CD7 antigen (Cd7) gene, complete cds Length = 4453 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 aagctccctccagctggcag 168 |||||||||||||||||||| Sbjct: 2518 aagctccctccagctggcag 2537
>emb|AL662887.13| Mouse DNA sequence from clone RP23-400P17 on chromosome 11, complete sequence Length = 198011 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 aagctccctccagctggcag 168 |||||||||||||||||||| Sbjct: 71271 aagctccctccagctggcag 71252
>emb|AL772249.6| Mouse DNA sequence from clone RP23-430H1 on chromosome 2, complete sequence Length = 204907 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 cgcgccgcgcctcgcctcgc 511 |||||||||||||||||||| Sbjct: 151893 cgcgccgcgcctcgcctcgc 151874
>gb|L07924.1|MUSGNDSA Mus musculus guanine nucleotide dissociation stimulator for a ras-related GTPase mRNA, complete cds Length = 3573 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 cgcgccgcgcctcgcctcgc 511 |||||||||||||||||||| Sbjct: 26 cgcgccgcgcctcgcctcgc 7
>dbj|D10329.1|MUSCD7 Mus musculus mRNA for CD7, complete cds Length = 978 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 aagctccctccagctggcag 168 |||||||||||||||||||| Sbjct: 347 aagctccctccagctggcag 366
>dbj|AB070949.1| Streptomyces avermitilis polyene macrolide biosynthetic gene cluster Length = 78210 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 accagcgcggcgcggttgga 420 |||||||||||||||||||| Sbjct: 75161 accagcgcggcgcggttgga 75142 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,899,136 Number of Sequences: 3902068 Number of extensions: 4899136 Number of successful extensions: 80912 Number of sequences better than 10.0: 95 Number of HSP's better than 10.0 without gapping: 97 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 79459 Number of HSP's gapped (non-prelim): 1450 length of query: 529 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 506 effective length of database: 17,143,297,704 effective search space: 8674508638224 effective search space used: 8674508638224 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)