ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd23k11 |
|---|---|
| Clone Library Name | barley_pub |
>ST7R_ARATH (Q9LDU6) 7-dehydrocholesterol reductase (EC 1.3.1.21) (7-DHC| reductase) (Sterol delta-7-reductase) (Dwarf5 protein) Length = 432 Score = 165 bits (418), Expect = 1e-40 Identities = 72/104 (69%), Positives = 84/104 (80%) Frame = -3 Query: 669 GKAPSKIIASYQTTKGETKTSLLLTSGWWGFSRHFHYAPEILAAFFWTVPALFTHFMPYF 490 G+APSKI+ASY TT GETKTSLLLTSGWWG +RHFHY PEIL+AFFWTVPALF +F+ YF Sbjct: 329 GRAPSKIVASYTTTSGETKTSLLLTSGWWGLARHFHYVPEILSAFFWTVPALFDNFLAYF 388 Query: 489 YVIFLTIXXXXXXXXXXXRCSTKYGKYWKMYCNRVPYRVVPGIY 358 YVIFLT+ RC +KYGKYWK+YC +V YR++PGIY Sbjct: 389 YVIFLTLLLFDRAKRDDDRCRSKYGKYWKLYCEKVKYRIIPGIY 432
>DHCR7_MIMIV (Q5UQI4) Probable 7-dehydrocholesterol reductase (EC 1.3.1.21)| (7-DHC reductase) (Sterol delta-7-reductase) Length = 447 Score = 102 bits (253), Expect = 1e-21 Identities = 46/98 (46%), Positives = 61/98 (62%) Frame = -3 Query: 651 IIASYQTTKGETKTSLLLTSGWWGFSRHFHYAPEILAAFFWTVPALFTHFMPYFYVIFLT 472 I +YQT G + S L+ SG WG SRH +Y +I+ + + + F+HF+PYFY +++T Sbjct: 350 IPCTYQTADGLNRASKLIYSGLWGVSRHMNYTGDIILSTAYCLACGFSHFIPYFYCVYMT 409 Query: 471 IXXXXXXXXXXXRCSTKYGKYWKMYCNRVPYRVVPGIY 358 I RCS KYGKYWKMY RVPYR +PGIY Sbjct: 410 ILLVTRCLRDEQRCSRKYGKYWKMYTKRVPYRFIPGIY 447
>LBR_HUMAN (Q14739) Lamin-B receptor (Integral nuclear envelope inner membrane| protein) (LMN2R) Length = 615 Score = 92.8 bits (229), Expect = 8e-19 Identities = 37/82 (45%), Positives = 49/82 (59%) Frame = -3 Query: 603 LLTSGWWGFSRHFHYAPEILAAFFWTVPALFTHFMPYFYVIFLTIXXXXXXXXXXXRCST 424 LL SGWWGF RH +Y +++ A W++P F H +PYFY+I+ T+ C Sbjct: 534 LLVSGWWGFVRHPNYLGDLIMALAWSLPCGFNHILPYFYIIYFTMLLVHREARDEYHCKK 593 Query: 423 KYGKYWKMYCNRVPYRVVPGIY 358 KYG W+ YC RVPYR+ P IY Sbjct: 594 KYGVAWEKYCQRVPYRIFPYIY 615
>DHCR7_XENTR (Q6P4M0) 7-dehydrocholesterol reductase (EC 1.3.1.21) (7-DHC| reductase) (Sterol delta-7-reductase) Length = 473 Score = 92.8 bits (229), Expect = 8e-19 Identities = 40/104 (38%), Positives = 62/104 (59%) Frame = -3 Query: 669 GKAPSKIIASYQTTKGETKTSLLLTSGWWGFSRHFHYAPEILAAFFWTVPALFTHFMPYF 490 GK P I SY + G+ S L+ SG+WG +RH +Y +++ + + + F H +PYF Sbjct: 370 GKKPKSIECSYTSADGKRHYSKLMISGFWGVARHLNYTGDLMGSLAYCLACGFDHLLPYF 429 Query: 489 YVIFLTIXXXXXXXXXXXRCSTKYGKYWKMYCNRVPYRVVPGIY 358 Y ++TI RCS+KYGK WK+Y + VPYR++PG++ Sbjct: 430 YFTYMTILLVHRCIRDEHRCSSKYGKDWKLYTDAVPYRLLPGLF 473
>DHCR7_XENLA (Q7ZXH1) 7-dehydrocholesterol reductase (EC 1.3.1.21) (7-DHC| reductase) (Sterol delta-7-reductase) Length = 473 Score = 92.0 bits (227), Expect = 1e-18 Identities = 40/104 (38%), Positives = 62/104 (59%) Frame = -3 Query: 669 GKAPSKIIASYQTTKGETKTSLLLTSGWWGFSRHFHYAPEILAAFFWTVPALFTHFMPYF 490 GK P I Y + G+ S L+ SG+WG +RH +Y +++ + + + F H +PYF Sbjct: 370 GKKPKSIECFYVSADGKRHYSKLMISGFWGVARHLNYTGDLMGSLAYCLACGFDHLLPYF 429 Query: 489 YVIFLTIXXXXXXXXXXXRCSTKYGKYWKMYCNRVPYRVVPGIY 358 Y I++TI RCS+KYGK WK+Y + VPYR++PG++ Sbjct: 430 YFIYMTILLVHRCIRDEHRCSSKYGKDWKLYTSAVPYRLLPGLF 473
>LBR_MOUSE (Q3U9G9) Lamin-B receptor (Integral nuclear envelope inner membrane| protein) Length = 626 Score = 92.0 bits (227), Expect = 1e-18 Identities = 41/97 (42%), Positives = 56/97 (57%) Frame = -3 Query: 648 IASYQTTKGETKTSLLLTSGWWGFSRHFHYAPEILAAFFWTVPALFTHFMPYFYVIFLTI 469 +A +T T SLL+ SGWWGF RH +Y +++ A W++P F H +PYFY+I+ T Sbjct: 531 LAHLKTIHTSTGKSLLV-SGWWGFVRHPNYLGDLIMALAWSLPCGFNHLLPYFYIIYFTA 589 Query: 468 XXXXXXXXXXXRCSTKYGKYWKMYCNRVPYRVVPGIY 358 +C KYG W+ YC RVPYR+ P IY Sbjct: 590 LLIHREARDEHQCRRKYGLAWEKYCQRVPYRIFPYIY 626
>LBR_RAT (O08984) Lamin-B receptor (Integral nuclear envelope inner membrane| protein) (NBP60) Length = 620 Score = 92.0 bits (227), Expect = 1e-18 Identities = 38/82 (46%), Positives = 49/82 (59%) Frame = -3 Query: 603 LLTSGWWGFSRHFHYAPEILAAFFWTVPALFTHFMPYFYVIFLTIXXXXXXXXXXXRCST 424 LL SGWWGF RH +Y +++ A W++P F H +PYFYVI+ T +C Sbjct: 539 LLVSGWWGFVRHPNYLGDLIMALAWSLPCGFNHILPYFYVIYFTALLIHREARDEHQCRR 598 Query: 423 KYGKYWKMYCNRVPYRVVPGIY 358 KYG W+ YC RVPYR+ P IY Sbjct: 599 KYGLAWEKYCQRVPYRIFPYIY 620
>LBR_PONPY (Q5R7H4) Lamin-B receptor (Integral nuclear envelope inner membrane| protein) Length = 615 Score = 90.9 bits (224), Expect = 3e-18 Identities = 36/82 (43%), Positives = 49/82 (59%) Frame = -3 Query: 603 LLTSGWWGFSRHFHYAPEILAAFFWTVPALFTHFMPYFYVIFLTIXXXXXXXXXXXRCST 424 LL SGWWGF+RH +Y +++ A W++ F H +PYFY+I+ T+ C Sbjct: 534 LLVSGWWGFARHPNYLGDLIMALAWSLACGFNHILPYFYIIYFTMLLVHREARDEYHCKK 593 Query: 423 KYGKYWKMYCNRVPYRVVPGIY 358 KYG W+ YC RVPYR+ P IY Sbjct: 594 KYGVAWEKYCQRVPYRIFPYIY 615
>DHCR7_RAT (Q9Z2Z8) 7-dehydrocholesterol reductase (EC 1.3.1.21) (7-DHC| reductase) (Sterol delta-7-reductase) Length = 471 Score = 89.0 bits (219), Expect = 1e-17 Identities = 40/104 (38%), Positives = 60/104 (57%) Frame = -3 Query: 669 GKAPSKIIASYQTTKGETKTSLLLTSGWWGFSRHFHYAPEILAAFFWTVPALFTHFMPYF 490 GK P I SY + G S LL SG+WG +RHF+Y +++ + + + H +PYF Sbjct: 368 GKKPKAIECSYTSADGLKHRSKLLVSGFWGVARHFNYTGDLMGSLAYCLACGGGHLLPYF 427 Query: 489 YVIFLTIXXXXXXXXXXXRCSTKYGKYWKMYCNRVPYRVVPGIY 358 Y+I++TI RC+ KYG+ W+ Y VPYR++PGI+ Sbjct: 428 YIIYMTILLTHRCLRDEHRCANKYGRDWERYVAAVPYRLLPGIF 471
>DHCR7_MOUSE (O88455) 7-dehydrocholesterol reductase (EC 1.3.1.21) (7-DHC| reductase) (Sterol delta-7-reductase) Length = 471 Score = 88.6 bits (218), Expect = 2e-17 Identities = 40/104 (38%), Positives = 60/104 (57%) Frame = -3 Query: 669 GKAPSKIIASYQTTKGETKTSLLLTSGWWGFSRHFHYAPEILAAFFWTVPALFTHFMPYF 490 GK P I SY + G S LL SG+WG +RHF+Y +++ + + + H +PYF Sbjct: 368 GKKPKAIECSYTSADGLKHHSKLLVSGFWGVARHFNYTGDLMGSLAYCLACGGGHLLPYF 427 Query: 489 YVIFLTIXXXXXXXXXXXRCSTKYGKYWKMYCNRVPYRVVPGIY 358 Y+I++TI RC+ KYG+ W+ Y VPYR++PGI+ Sbjct: 428 YIIYMTILLTHRCLRDEHRCANKYGRDWERYTAAVPYRLLPGIF 471
>DHCR7_BOVIN (Q5E9J5) 7-dehydrocholesterol reductase (EC 1.3.1.21) (7-DHC| reductase) (Sterol delta-7-reductase) Length = 475 Score = 88.2 bits (217), Expect = 2e-17 Identities = 39/104 (37%), Positives = 60/104 (57%) Frame = -3 Query: 669 GKAPSKIIASYQTTKGETKTSLLLTSGWWGFSRHFHYAPEILAAFFWTVPALFTHFMPYF 490 G+ P I SY + G+ S LL SG+WG +RHF+Y +++ + + + H +PYF Sbjct: 372 GRKPKAIECSYTSADGQRHHSKLLVSGFWGVARHFNYTGDLMGSLAYCLACGGGHLLPYF 431 Query: 489 YVIFLTIXXXXXXXXXXXRCSTKYGKYWKMYCNRVPYRVVPGIY 358 Y+IF+ I RC+ KYG+ W+ Y VPYR++PGI+ Sbjct: 432 YIIFMAILLTHRCLRDEHRCANKYGRDWEHYTAAVPYRLLPGIF 475
>DHCR7_BRARE (Q7SXF1) 7-dehydrocholesterol reductase (EC 1.3.1.21) (7-DHC| reductase) (Sterol delta-7-reductase) Length = 478 Score = 87.8 bits (216), Expect = 3e-17 Identities = 40/104 (38%), Positives = 60/104 (57%) Frame = -3 Query: 669 GKAPSKIIASYQTTKGETKTSLLLTSGWWGFSRHFHYAPEILAAFFWTVPALFTHFMPYF 490 GK P+ I SYQ+ G S L+TSG+WG +RH +Y +++ + + + H +PYF Sbjct: 375 GKKPTFIECSYQSADGAIHKSKLMTSGFWGVARHMNYTGDLMGSLAYCLACGGNHLLPYF 434 Query: 489 YVIFLTIXXXXXXXXXXXRCSTKYGKYWKMYCNRVPYRVVPGIY 358 Y+I++TI RCS KYGK W+ Y V YR++P I+ Sbjct: 435 YIIYMTILLVHRCIRDEHRCSNKYGKDWERYTAAVSYRLLPNIF 478
>DHCR7_HUMAN (Q9UBM7) 7-dehydrocholesterol reductase (EC 1.3.1.21) (7-DHC| reductase) (Sterol delta-7-reductase) (Putative sterol reductase SR-2) Length = 475 Score = 87.4 bits (215), Expect = 3e-17 Identities = 38/104 (36%), Positives = 61/104 (58%) Frame = -3 Query: 669 GKAPSKIIASYQTTKGETKTSLLLTSGWWGFSRHFHYAPEILAAFFWTVPALFTHFMPYF 490 G+ P I SY + G+ S LL SG+WG +RHF+Y +++ + + + H +PYF Sbjct: 372 GRKPKVIECSYTSADGQRHHSKLLVSGFWGVARHFNYVGDLMGSLAYCLACGGGHLLPYF 431 Query: 489 YVIFLTIXXXXXXXXXXXRCSTKYGKYWKMYCNRVPYRVVPGIY 358 Y+I++ I RC++KYG+ W+ Y VPYR++PGI+ Sbjct: 432 YIIYMAILLTHRCLRDEHRCASKYGRDWERYTAAVPYRLLPGIF 475
>ERG24_HUMAN (O76062) Delta(14)-sterol reductase (EC 1.3.1.70) (C-14 sterol| reductase) (Sterol C14-reductase) (Delta14-SR) (Transmembrane 7 superfamily member 2) (Another new gene 1 protein) (Putative sterol reductase SR-1) Length = 418 Score = 85.5 bits (210), Expect = 1e-16 Identities = 34/82 (41%), Positives = 49/82 (59%) Frame = -3 Query: 603 LLTSGWWGFSRHFHYAPEILAAFFWTVPALFTHFMPYFYVIFLTIXXXXXXXXXXXRCST 424 LL SGWWG RH +Y +++ A W++P +H +PYFY+++ T +C Sbjct: 337 LLVSGWWGMVRHPNYLGDLIMALAWSLPCGVSHLLPYFYLLYFTALLVHREARDERQCLQ 396 Query: 423 KYGKYWKMYCNRVPYRVVPGIY 358 KYG W+ YC RVPYR++P IY Sbjct: 397 KYGLAWQEYCRRVPYRIMPYIY 418
>ERG24_SCHPO (Q09195) Delta(14)-sterol reductase (EC 1.3.1.70) (C-14 sterol| reductase) (Sterol C14-reductase) Length = 424 Score = 81.6 bits (200), Expect = 2e-15 Identities = 37/91 (40%), Positives = 52/91 (57%) Frame = -3 Query: 630 TKGETKTSLLLTSGWWGFSRHFHYAPEILAAFFWTVPALFTHFMPYFYVIFLTIXXXXXX 451 TK TK LLTSGWWG +RH +Y + + A+ W +PA F +PYFYV + + Sbjct: 337 TKRGTK---LLTSGWWGMARHINYFGDWIMAWAWCLPAGFGSPIPYFYVAYFGVLLVHRN 393 Query: 450 XXXXXRCSTKYGKYWKMYCNRVPYRVVPGIY 358 +C KYG+ W+ YC V YR++P +Y Sbjct: 394 ARDDHKCRVKYGEDWEKYCKAVKYRIIPYVY 424
>LBR_CHICK (P23913) Lamin-B receptor| Length = 637 Score = 81.3 bits (199), Expect = 3e-15 Identities = 33/75 (44%), Positives = 42/75 (56%) Frame = -3 Query: 603 LLTSGWWGFSRHFHYAPEILAAFFWTVPALFTHFMPYFYVIFLTIXXXXXXXXXXXRCST 424 LL +GWWGF RH +Y +I+ A W++P F H +PYFYVI+ C Sbjct: 527 LLVTGWWGFVRHPNYLGDIIMALAWSLPCGFNHILPYFYVIYFICLLVHREARDEHHCKK 586 Query: 423 KYGKYWKMYCNRVPY 379 KYG W+ YC RVPY Sbjct: 587 KYGLAWERYCQRVPY 601
>ERG24_ASCIM (P78575) Delta(14)-sterol reductase (EC 1.3.1.70) (C-14 sterol| reductase) (Sterol C14-reductase) Length = 430 Score = 74.3 bits (181), Expect = 3e-13 Identities = 36/94 (38%), Positives = 51/94 (54%) Frame = -3 Query: 639 YQTTKGETKTSLLLTSGWWGFSRHFHYAPEILAAFFWTVPALFTHFMPYFYVIFLTIXXX 460 + TTK +K LL SGWWG +RH +Y + + A+ + + F + YFYVI+ I Sbjct: 340 FMTTKSGSK---LLISGWWGVARHVNYFGDWIMAWSYCLTTGFNTPLTYFYVIYFGILLL 396 Query: 459 XXXXXXXXRCSTKYGKYWKMYCNRVPYRVVPGIY 358 +C KYGK W YC V +R++PGIY Sbjct: 397 HRDRRDEAKCREKYGKDWDRYCKVVKWRIIPGIY 430
>ERG24_ARATH (Q9LDR4) Delta(14)-sterol reductase (EC 1.3.1.70) (C-14 sterol| reductase) (Sterol C14-reductase) (FACKEL protein) Length = 369 Score = 65.1 bits (157), Expect = 2e-10 Identities = 29/82 (35%), Positives = 47/82 (57%) Frame = -3 Query: 603 LLTSGWWGFSRHFHYAPEILAAFFWTVPALFTHFMPYFYVIFLTIXXXXXXXXXXXRCST 424 LL SG+WG +RH +Y +++ A +++P + +PYFY I+L I RC+ Sbjct: 288 LLVSGYWGIARHCNYLGDLMLALSFSLPCGISSPVPYFYPIYLLILLIWRERRDEVRCAE 347 Query: 423 KYGKYWKMYCNRVPYRVVPGIY 358 KY + W Y VP+R++P +Y Sbjct: 348 KYKEIWAEYLRLVPWRILPYVY 369
>ERG24_SEPLY (O13597) Delta(14)-sterol reductase (EC 1.3.1.70) (C-14 sterol| reductase) (Sterol C14-reductase) Length = 512 Score = 62.8 bits (151), Expect = 9e-10 Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 26/114 (22%) Frame = -3 Query: 621 ETKT-SLLLTSGWWGFSRHFHYAPEILAAFFWTVPALFTHF------------------- 502 ET T S LLT+GWWG +RH +Y + L ++ + +P L + Sbjct: 399 ETGTGSRLLTTGWWGTARHINYLGDWLMSWSYCLPTLAAGYKLTPTILFENSRLVSTDGM 458 Query: 501 ------MPYFYVIFLTIXXXXXXXXXXXRCSTKYGKYWKMYCNRVPYRVVPGIY 358 + YFY+++ I +C KYG +W+ YC V +R++PG+Y Sbjct: 459 KGAGIPITYFYMLYFAILLIHRERRDEAKCRRKYGAHWEKYCQIVRWRILPGVY 512
>ERG24_YEAST (P32462) Delta(14)-sterol reductase (EC 1.3.1.70) (C-14 sterol| reductase) (Sterol C14-reductase) Length = 438 Score = 62.0 bits (149), Expect = 2e-09 Identities = 28/97 (28%), Positives = 48/97 (49%) Frame = -3 Query: 648 IASYQTTKGETKTSLLLTSGWWGFSRHFHYAPEILAAFFWTVPALFTHFMPYFYVIFLTI 469 + S QT +G + LL GWW S+H +Y + L + W + F + Y+Y ++ Sbjct: 346 LKSIQTKRG----TKLLCDGWWAKSQHINYFGDWLISLSWCLATWFQTPLTYYYSLYFAT 401 Query: 468 XXXXXXXXXXXRCSTKYGKYWKMYCNRVPYRVVPGIY 358 +C KYG+ W+ Y +VPY+++P +Y Sbjct: 402 LLLHRQQRDEHKCRLKYGENWEEYERKVPYKIIPYVY 438
>ERG4_YEAST (P25340) Delta(24(24(1)))-sterol reductase (EC 1.3.1.71) (Sterol| delta(24(28))-reductase) (C-24(28) sterol reductase) Length = 473 Score = 60.5 bits (145), Expect = 5e-09 Identities = 24/84 (28%), Positives = 37/84 (44%) Frame = -3 Query: 609 SLLLTSGWWGFSRHFHYAPEILAAFFWTVPALFTHFMPYFYVIFLTIXXXXXXXXXXXRC 430 S LL GW+ +R HY + + W + F P+F+ +F + +C Sbjct: 390 SYLLIDGWYTLARKIHYTADWTQSLVWALSCGFNSVFPWFFPVFFLVVLIHRAFRDQAKC 449 Query: 429 STKYGKYWKMYCNRVPYRVVPGIY 358 KYGK W YC PY +P ++ Sbjct: 450 KRKYGKDWDEYCKHCPYVFIPYVF 473
>STS1_SCHPO (P36209) Delta(24(24(1)))-sterol reductase (EC 1.3.1.71) (Sterol| delta(24(28))-reductase) (C-24(28) sterol reductase) Length = 453 Score = 58.9 bits (141), Expect = 1e-08 Identities = 26/82 (31%), Positives = 38/82 (46%) Frame = -3 Query: 603 LLTSGWWGFSRHFHYAPEILAAFFWTVPALFTHFMPYFYVIFLTIXXXXXXXXXXXRCST 424 LLTSGW+ ++R HY + + W + F +PYFY F + +C Sbjct: 372 LLTSGWYRYARKIHYTADFFQSLSWALITGFQSPLPYFYPCFFFVVLVHRVSRDIKKCKA 431 Query: 423 KYGKYWKMYCNRVPYRVVPGIY 358 KYG + YC PY +P I+ Sbjct: 432 KYGADFDEYCRICPYLFIPYIF 453
>ERG24_NEUCR (P38670) Delta(14)-sterol reductase (EC 1.3.1.70) (C-14 sterol| reductase) (Sterol C14-reductase) Length = 490 Score = 58.2 bits (139), Expect = 2e-08 Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 33/121 (27%) Frame = -3 Query: 621 ETKT-SLLLTSGWWGFSRHFHYAPEILAAFFWTVPALFTHFM------------------ 499 +TKT S L+TSGWWG +RH +Y + L ++ +++P + Sbjct: 370 QTKTGSRLITSGWWGIARHINYLGDWLQSWPYSLPTGIAGYQILSAGSNAPGAITMLDGR 429 Query: 498 --------------PYFYVIFLTIXXXXXXXXXXXRCSTKYGKYWKMYCNRVPYRVVPGI 361 YFY+++ I +CS KYG W+ Y V +R+VPGI Sbjct: 430 EVVQGEARGWGIVFTYFYILYFAILLIHRDLRDDEKCSKKYGDDWEKYKKLVKWRIVPGI 489 Query: 360 Y 358 Y Sbjct: 490 Y 490
>ERG24_FUSSO (Q01447) Delta(14)-sterol reductase (EC 1.3.1.70) (C-14 sterol| reductase) (Sterol C14-reductase) Length = 485 Score = 55.1 bits (131), Expect = 2e-07 Identities = 33/125 (26%), Positives = 51/125 (40%), Gaps = 32/125 (25%) Frame = -3 Query: 636 QTTKGETKTSLLLTSGWWGFSRHFHYAPEILAAFFWTVPALFTHF--------------- 502 QT KG S LL SGWWG +RH +Y + + ++ + +P + Sbjct: 365 QTKKG----SKLLISGWWGIARHINYLGDWIQSWPYCLPTGLAGYQILNAGAQAEGALVM 420 Query: 501 -----------------MPYFYVIFLTIXXXXXXXXXXXRCSTKYGKYWKMYCNRVPYRV 373 + YFY+++ I +C KYG+ W+ Y V YR+ Sbjct: 421 RDGREVVQGEAKGWGMLITYFYILYFAILLIHRERRDDDKCHRKYGEDWEKYRKIVRYRI 480 Query: 372 VPGIY 358 +PGIY Sbjct: 481 IPGIY 485 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 83,862,991 Number of Sequences: 219361 Number of extensions: 1524157 Number of successful extensions: 3779 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 3707 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3778 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6541540170 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
