ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd23k11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_465527.1| Oryza sativa (japonica cultivar-group), mRNA 311 2e-81
2dbj|AK100199.1| Oryza sativa (japonica cultivar-group) cDNA clon... 311 2e-81
3gb|BT019183.1| Zea mays clone Contig854.F mRNA sequence 295 1e-76
4gb|AY105566.1| Zea mays PCO110886 mRNA sequence 295 1e-76
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 105 2e-19
6dbj|AP004850.3| Oryza sativa (japonica cultivar-group) genomic D... 105 2e-19
7dbj|AP005514.2| Oryza sativa (japonica cultivar-group) genomic D... 105 2e-19
8gb|AY700050.1| Morus alba sterol delta-7 reductase (Dwf5) mRNA, ... 78 4e-11
9gb|AF417293.1| Castanea sativa putative delta-7-sterol reductase... 64 6e-07
10gb|AY465906.1| Tropaeolum majus sterol delta-7 reductase mRNA, c... 56 2e-04
11gb|BT014090.1| Lycopersicon esculentum clone 133194F, mRNA sequence 52 0.002
12ref|NM_103926.3| Arabidopsis thaliana DWF5 (DWARF 5); sterol del... 50 0.010
13gb|BT000245.1| Arabidopsis thaliana sterol delta7 reductase (At1... 50 0.010
14gb|AY099589.1| Arabidopsis thaliana sterol delta7 reductase (At1... 50 0.010
15gb|DQ122179.1| Gossypium hirsutum sterol delta-7 reductase DWF5 ... 50 0.010
16emb|BX814766.1|CNS0ADP2 Arabidopsis thaliana Full-length cDNA Co... 50 0.010
17emb|BX816975.1|CNS0ADC4 Arabidopsis thaliana Full-length cDNA Co... 50 0.010
18emb|BX815520.1|CNS0ACRS Arabidopsis thaliana Full-length cDNA Co... 50 0.010
19emb|BX815483.1|CNS0ACUG Arabidopsis thaliana Full-length cDNA Co... 50 0.010
20emb|BX815400.1|CNS0ACTM Arabidopsis thaliana Full-length cDNA Co... 50 0.010
21emb|BX815175.1|CNS0ACTH Arabidopsis thaliana Full-length cDNA Co... 50 0.010
22emb|BX818511.1|CNS0ACIW Arabidopsis thaliana Full-length cDNA Co... 50 0.010
23gb|U49398.1|ATU49398 Arabidopsis thaliana sterol delta-7 reducta... 50 0.010
24gb|M27821.1|MZENAR Maize NADH:nitrate reductase (NR) mRNA, 3' end 46 0.15
25gb|AF523077.1| Acacia lycopodiifolia trnK gene, partial sequence... 44 0.59
26gb|AF523076.1| Acacia adoxa chloroplast trnK gene, intron sequen... 44 0.59
27gb|DQ371879.1| Acacia lycopodifolia voucher CANB 615616 trnK gen... 44 0.59
28gb|AF239701.1| Arabidopsis thaliana sterol delta7 reductase (DWA... 44 0.59
29gb|AC074124.4| Homo sapiens BAC clone RP11-763F8 from 4, complet... 44 0.59
30gb|AC012561.2|AC012561 Arabidopsis thaliana chromosome I BAC F11... 44 0.59
31gb|AC129552.20| Mus musculus chromosome 5, clone RP24-122N24, co... 42 2.3
32gb|AC103975.9| Homo sapiens chromosome 15, clone RP11-1001M11, c... 42 2.3
33gb|AC091523.23| Mus musculus strain C57BL/6J clone rp23-77a8 map... 42 2.3
34gb|AC158228.3| Mus musculus chromosome 5, clone RP23-118K12, com... 42 2.3
35gb|AC158930.3| Mus musculus chromosome 1, clone RP23-244J9, comp... 42 2.3
36gb|AC163270.5| Mus musculus chromosome 1, clone RP24-292B21, com... 42 2.3
37gb|AC022748.10| Homo sapiens chromosome 15, clone RP11-160C18, c... 42 2.3
38gb|AC182398.3| Pan troglodytes BAC clone CH251-119B5 from chromo... 42 2.3
39gb|AC101455.9| Mus musculus chromosome 1, clone RP23-185E17, com... 42 2.3
40gb|AC068338.14| Homo sapiens chromosome 15, clone RP11-817O13, c... 42 2.3
41gb|AC105137.17| Homo sapiens chromosome 15, clone CTD-2562G15, c... 42 2.3
42emb|BX005036.6| Mouse DNA sequence from clone RP23-185E17 on chr... 42 2.3
43gb|AC114984.18| Mus musculus chromosome 18, clone RP23-248F9, co... 40 9.2
44gb|DQ481668.1| Takifugu rubripes HoxDa gene cluster, complete se... 40 9.2
45emb|BX677675.9| Zebrafish DNA sequence from clone DKEYP-90G12 in... 40 9.2
46gb|AC132357.3| Mus musculus BAC clone RP24-120G2 from chromosome... 40 9.2
47gb|AE014303.1| Homo sapiens chromosome 13q34 schizophrenia regio... 40 9.2
48gb|AC150314.5| Mus musculus BAC clone RP23-269O24 from chromosom... 40 9.2
49emb|AL160153.11| Human DNA sequence from clone RP11-397O8 on chr... 40 9.2
50gb|AC164154.2| Mus musculus chromosome 18, clone RP23-60G12, com... 40 9.2
51emb|BX294154.1| Pirellula sp. strain 1 complete genome; segment ... 40 9.2
52emb|AL391737.2|CNS06C8G chromosome I of strain GB-M1 of Encephal... 40 9.2
53emb|CR860142.1| Pongo pygmaeus mRNA; cDNA DKFZp469G1019 (from cl... 40 9.2
54emb|CR556722.7| Zebrafish DNA sequence from clone CH211-195N12 i... 40 9.2
55ref|XM_680543.1| PREDICTED: Danio rerio similar to Leucine zippe... 40 9.2
56gb|AE008685.1|AE008685 Mus musculus T-cell receptor alpha/delta ... 40 9.2
57gb|AE008684.1|AE008684 Mus musculus T-cell receptor alpha/delta ... 40 9.2
58gb|AC008872.6| Homo sapiens chromosome 5 clone CTD-2198D21, comp... 40 9.2
59gb|AC158239.2| Mus musculus BAC clone RP23-48A24 from chromosome... 40 9.2
60dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
61dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
62emb|BX119973.7| Zebrafish DNA sequence from clone RP71-77D7 in l... 40 9.2
63gb|AC005402.1|AC005402 Mus musculus clone UWGC:mbac37 from 14D1-... 40 9.2
64gb|AC003997.1|AC003997 Mouse BAC mbac20 from 14D1-D2 (T-Cell Rec... 40 9.2
65gb|AC140787.4| Mus musculus BAC clone RP23-411H17 from 10, compl... 40 9.2
66emb|AL844609.6| Mouse DNA sequence from clone RP23-356F8 on chro... 40 9.2

>ref|XM_465527.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1913

 Score =  311 bits (157), Expect = 2e-81
 Identities = 277/317 (87%)
 Strand = Plus / Minus

                                                                        
Query: 355  tcagtaaataccaggaacaaccctgtaaggtactctgttgcagtacatcttccagtactt 414
            ||||||||| ||||||| ||||||| | |||||| ||||||||||||||||||| |||||
Sbjct: 1504 tcagtaaatgccaggaataaccctgcacggtactttgttgcagtacatcttccaatactt 1445

                                                                        
Query: 415  gccgtactttgttgagcatctatcatcatccctcttcgctcggtcaagcagtagaatggt 474
            ||| ||||||| ||||||||  ||||||||||| || |||||||| | ||| |  |||||
Sbjct: 1444 gccatactttgatgagcatcggtcatcatcccttttagctcggtcgaacagcaatatggt 1385

                                                                        
Query: 475  cagaaatatcacatagaagtatggcataaaatgagtgaaaagagctggaacggtccagaa 534
            |||||| |||||||||||||| ||||  ||||||   |||||||||||||| ||||||||
Sbjct: 1384 cagaaagatcacatagaagtacggcaggaaatgatcaaaaagagctggaactgtccagaa 1325

                                                                        
Query: 535  aaatgctgctaggatctctggggcatagtgaaagtgacgagaaaagccccaccatccaga 594
            ||| || | ||| ||||||||  |||||||||| |||||||| |||||||||||||||||
Sbjct: 1324 aaaagcagatagaatctctggaacatagtgaaaatgacgagacaagccccaccatccaga 1265

                                                                        
Query: 595  agtcaagagaagactggtttttgtttctccctttgttgtctgataggaagcaataatctt 654
            |||||||||||||||| ||||||||||||| ||||| |||||||||||||||| ||||||
Sbjct: 1264 agtcaagagaagactgctttttgtttctccatttgtagtctgataggaagcaacaatctt 1205

                             
Query: 655  tgacggggctttgcccc 671
             || || ||||||||||
Sbjct: 1204 agatggagctttgcccc 1188



to top

>dbj|AK100199.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038E06, full
            insert sequence
          Length = 1911

 Score =  311 bits (157), Expect = 2e-81
 Identities = 277/317 (87%)
 Strand = Plus / Minus

                                                                        
Query: 355  tcagtaaataccaggaacaaccctgtaaggtactctgttgcagtacatcttccagtactt 414
            ||||||||| ||||||| ||||||| | |||||| ||||||||||||||||||| |||||
Sbjct: 1502 tcagtaaatgccaggaataaccctgcacggtactttgttgcagtacatcttccaatactt 1443

                                                                        
Query: 415  gccgtactttgttgagcatctatcatcatccctcttcgctcggtcaagcagtagaatggt 474
            ||| ||||||| ||||||||  ||||||||||| || |||||||| | ||| |  |||||
Sbjct: 1442 gccatactttgatgagcatcggtcatcatcccttttagctcggtcgaacagcaatatggt 1383

                                                                        
Query: 475  cagaaatatcacatagaagtatggcataaaatgagtgaaaagagctggaacggtccagaa 534
            |||||| |||||||||||||| ||||  ||||||   |||||||||||||| ||||||||
Sbjct: 1382 cagaaagatcacatagaagtacggcaggaaatgatcaaaaagagctggaactgtccagaa 1323

                                                                        
Query: 535  aaatgctgctaggatctctggggcatagtgaaagtgacgagaaaagccccaccatccaga 594
            ||| || | ||| ||||||||  |||||||||| |||||||| |||||||||||||||||
Sbjct: 1322 aaaagcagatagaatctctggaacatagtgaaaatgacgagacaagccccaccatccaga 1263

                                                                        
Query: 595  agtcaagagaagactggtttttgtttctccctttgttgtctgataggaagcaataatctt 654
            |||||||||||||||| ||||||||||||| ||||| |||||||||||||||| ||||||
Sbjct: 1262 agtcaagagaagactgctttttgtttctccatttgtagtctgataggaagcaacaatctt 1203

                             
Query: 655  tgacggggctttgcccc 671
             || || ||||||||||
Sbjct: 1202 agatggagctttgcccc 1186



to top

>gb|BT019183.1| Zea mays clone Contig854.F mRNA sequence
          Length = 916

 Score =  295 bits (149), Expect = 1e-76
 Identities = 275/317 (86%)
 Strand = Plus / Minus

                                                                       
Query: 355 tcagtaaataccaggaacaaccctgtaaggtactctgttgcagtacatcttccagtactt 414
           ||||||||| |||||||  || ||||| |||||| |||||||||| ||||||||||||||
Sbjct: 539 tcagtaaatgccaggaatgactctgtatggtactttgttgcagtaaatcttccagtactt 480

                                                                       
Query: 415 gccgtactttgttgagcatctatcatcatccctcttcgctcggtcaagcagtagaatggt 474
            |||||||||| |||||| |  |||||||||||||| |||||||||| || ||  || ||
Sbjct: 479 cccgtactttgatgagcaccggtcatcatccctctttgctcggtcaaacaataatatagt 420

                                                                       
Query: 475 cagaaatatcacatagaagtatggcataaaatgagtgaaaagagctggaacggtccagaa 534
           |||||| ||||| ||||||||||| |  || ||| |||||||||||||||| ||||||||
Sbjct: 419 cagaaagatcacgtagaagtatggtaggaagtgattgaaaagagctggaacagtccagaa 360

                                                                       
Query: 535 aaatgctgctaggatctctggggcatagtgaaagtgacgagaaaagccccaccatccaga 594
           |||||| | ||| ||||||||| ||||||| |||||||| || |||||||||||||||||
Sbjct: 359 aaatgcagatagtatctctgggacatagtggaagtgacgtgacaagccccaccatccaga 300

                                                                       
Query: 595 agtcaagagaagactggtttttgtttctccctttgttgtctgataggaagcaataatctt 654
           ||||||||||||||||||||| |||||||||||||| |||||||| || |||| ||||||
Sbjct: 299 agtcaagagaagactggttttagtttctccctttgtagtctgataagaggcaacaatctt 240

                            
Query: 655 tgacggggctttgcccc 671
            || || || |||||||
Sbjct: 239 agatggagccttgcccc 223



to top

>gb|AY105566.1| Zea mays PCO110886 mRNA sequence
          Length = 1863

 Score =  295 bits (149), Expect = 1e-76
 Identities = 275/317 (86%)
 Strand = Plus / Minus

                                                                        
Query: 355  tcagtaaataccaggaacaaccctgtaaggtactctgttgcagtacatcttccagtactt 414
            ||||||||| |||||||  || ||||| |||||| |||||||||| ||||||||||||||
Sbjct: 1455 tcagtaaatgccaggaatgactctgtatggtactttgttgcagtaaatcttccagtactt 1396

                                                                        
Query: 415  gccgtactttgttgagcatctatcatcatccctcttcgctcggtcaagcagtagaatggt 474
             |||||||||| |||||| |  |||||||||||||| |||||||||| || ||  || ||
Sbjct: 1395 cccgtactttgatgagcaccggtcatcatccctctttgctcggtcaaacaataatatagt 1336

                                                                        
Query: 475  cagaaatatcacatagaagtatggcataaaatgagtgaaaagagctggaacggtccagaa 534
            |||||| ||||| ||||||||||| |  || ||| |||||||||||||||| ||||||||
Sbjct: 1335 cagaaagatcacgtagaagtatggtaggaagtgattgaaaagagctggaacagtccagaa 1276

                                                                        
Query: 535  aaatgctgctaggatctctggggcatagtgaaagtgacgagaaaagccccaccatccaga 594
            |||||| | ||| ||||||||| ||||||| |||||||| || |||||||||||||||||
Sbjct: 1275 aaatgcagatagtatctctgggacatagtggaagtgacgtgacaagccccaccatccaga 1216

                                                                        
Query: 595  agtcaagagaagactggtttttgtttctccctttgttgtctgataggaagcaataatctt 654
            ||||||||||||||||||||| |||||||||||||| |||||||| || |||| ||||||
Sbjct: 1215 agtcaagagaagactggttttagtttctccctttgtagtctgataagaggcaacaatctt 1156

                             
Query: 655  tgacggggctttgcccc 671
             || || || |||||||
Sbjct: 1155 agatggagccttgcccc 1139



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  105 bits (53), Expect = 2e-19
 Identities = 65/69 (94%)
 Strand = Plus / Plus

                                                                            
Query: 585      accatccagaagtcaagagaagactggtttttgtttctccctttgttgtctgataggaag 644
                |||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||
Sbjct: 15742512 accatccagaagtcaagagaagactgctttttgtttctccatttgtagtctgataggaag 15742571

                         
Query: 645      caataatct 653
                ||| |||||
Sbjct: 15742572 caacaatct 15742580



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 67/76 (88%)
 Strand = Plus / Plus

                                                                            
Query: 512      aaaagagctggaacggtccagaaaaatgctgctaggatctctggggcatagtgaaagtga 571
                |||||||||||||| ||||||||||| || | ||| ||||||||  |||||||||| |||
Sbjct: 15742320 aaaagagctggaactgtccagaaaaaagcagatagaatctctggaacatagtgaaaatga 15742379

                                
Query: 572      cgagaaaagccccacc 587
                ||||| ||||||||||
Sbjct: 15742380 cgagacaagccccacc 15742395



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                            
Query: 355      tcagtaaataccaggaacaaccctgtaaggtactctgttgcagtacatcttccagtactt 414
                ||||||||| ||||||| ||||||| | |||||| ||||||||||||||||||| |||||
Sbjct: 15741493 tcagtaaatgccaggaataaccctgcacggtactttgttgcagtacatcttccaatactt 15741552

                   
Query: 415      gcc 417
                |||
Sbjct: 15741553 gcc 15741555



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 70/82 (85%)
 Strand = Plus / Plus

                                                                            
Query: 419      tactttgttgagcatctatcatcatccctcttcgctcggtcaagcagtagaatggtcaga 478
                ||||||| ||||||||  ||||||||||| || |||||||| | ||| |  |||||||||
Sbjct: 15742152 tactttgatgagcatcggtcatcatcccttttagctcggtcgaacagcaatatggtcaga 15742211

                                      
Query: 479      aatatcacatagaagtatggca 500
                || |||||||||||||| ||||
Sbjct: 15742212 aagatcacatagaagtacggca 15742233



to top

>dbj|AP004850.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
           BAC clone:OJ1342_D02
          Length = 125460

 Score =  105 bits (53), Expect = 2e-19
 Identities = 65/69 (94%)
 Strand = Plus / Plus

                                                                       
Query: 585 accatccagaagtcaagagaagactggtttttgtttctccctttgttgtctgataggaag 644
           |||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||
Sbjct: 452 accatccagaagtcaagagaagactgctttttgtttctccatttgtagtctgataggaag 511

                    
Query: 645 caataatct 653
           ||| |||||
Sbjct: 512 caacaatct 520



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 67/76 (88%)
 Strand = Plus / Plus

                                                                       
Query: 512 aaaagagctggaacggtccagaaaaatgctgctaggatctctggggcatagtgaaagtga 571
           |||||||||||||| ||||||||||| || | ||| ||||||||  |||||||||| |||
Sbjct: 260 aaaagagctggaactgtccagaaaaaagcagatagaatctctggaacatagtgaaaatga 319

                           
Query: 572 cgagaaaagccccacc 587
           ||||| ||||||||||
Sbjct: 320 cgagacaagccccacc 335



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 70/82 (85%)
 Strand = Plus / Plus

                                                                       
Query: 419 tactttgttgagcatctatcatcatccctcttcgctcggtcaagcagtagaatggtcaga 478
           ||||||| ||||||||  ||||||||||| || |||||||| | ||| |  |||||||||
Sbjct: 92  tactttgatgagcatcggtcatcatcccttttagctcggtcgaacagcaatatggtcaga 151

                                 
Query: 479 aatatcacatagaagtatggca 500
           || |||||||||||||| ||||
Sbjct: 152 aagatcacatagaagtacggca 173



to top

>dbj|AP005514.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0035A24
          Length = 176446

 Score =  105 bits (53), Expect = 2e-19
 Identities = 65/69 (94%)
 Strand = Plus / Plus

                                                                          
Query: 585    accatccagaagtcaagagaagactggtttttgtttctccctttgttgtctgataggaag 644
              |||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||
Sbjct: 151199 accatccagaagtcaagagaagactgctttttgtttctccatttgtagtctgataggaag 151258

                       
Query: 645    caataatct 653
              ||| |||||
Sbjct: 151259 caacaatct 151267



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 67/76 (88%)
 Strand = Plus / Plus

                                                                          
Query: 512    aaaagagctggaacggtccagaaaaatgctgctaggatctctggggcatagtgaaagtga 571
              |||||||||||||| ||||||||||| || | ||| ||||||||  |||||||||| |||
Sbjct: 151007 aaaagagctggaactgtccagaaaaaagcagatagaatctctggaacatagtgaaaatga 151066

                              
Query: 572    cgagaaaagccccacc 587
              ||||| ||||||||||
Sbjct: 151067 cgagacaagccccacc 151082



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                          
Query: 355    tcagtaaataccaggaacaaccctgtaaggtactctgttgcagtacatcttccagtactt 414
              ||||||||| ||||||| ||||||| | |||||| ||||||||||||||||||| |||||
Sbjct: 150180 tcagtaaatgccaggaataaccctgcacggtactttgttgcagtacatcttccaatactt 150239

                 
Query: 415    gcc 417
              |||
Sbjct: 150240 gcc 150242



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 70/82 (85%)
 Strand = Plus / Plus

                                                                          
Query: 419    tactttgttgagcatctatcatcatccctcttcgctcggtcaagcagtagaatggtcaga 478
              ||||||| ||||||||  ||||||||||| || |||||||| | ||| |  |||||||||
Sbjct: 150839 tactttgatgagcatcggtcatcatcccttttagctcggtcgaacagcaatatggtcaga 150898

                                    
Query: 479    aatatcacatagaagtatggca 500
              || |||||||||||||| ||||
Sbjct: 150899 aagatcacatagaagtacggca 150920



to top

>gb|AY700050.1| Morus alba sterol delta-7 reductase (Dwf5) mRNA, partial cds
          Length = 864

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 96/115 (83%)
 Strand = Plus / Minus

                                                                       
Query: 510 tgaaaagagctggaacggtccagaaaaatgctgctaggatctctggggcatagtgaaagt 569
           |||||||||||||||| ||||||||||| || ||||  || |||||  |||||||||| |
Sbjct: 793 tgaaaagagctggaacagtccagaaaaaggcagctaatatttctggtacatagtgaaaat 734

                                                                  
Query: 570 gacgagaaaagccccaccatccagaagtcaagagaagactggtttttgtttctcc 624
           | ||||| || |||||||||||||| || || ||||  ||  |||||||||||||
Sbjct: 733 gccgagataatccccaccatccagaggttaaaagaatgctattttttgtttctcc 679



to top

>gb|AF417293.1| Castanea sativa putative delta-7-sterol reductase mRNA, partial cds
          Length = 538

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 86/104 (82%)
 Strand = Plus / Minus

                                                                       
Query: 431 catctatcatcatccctcttcgctcggtcaagcagtagaatggtcagaaatatcacatag 490
           |||| |||||||||||| || ||||||||||  || || || || |||||||||||||||
Sbjct: 128 catcgatcatcatccctttttgctcggtcaaaaagaaggatagtaagaaatatcacatag 69

                                                       
Query: 491 aagtatggcataaaatgagtgaaaagagctggaacggtccagaa 534
           ||| | || |  |||||| | || |||||||| |||||||||||
Sbjct: 68  aagaaaggtaggaaatgattaaagagagctgggacggtccagaa 25



to top

>gb|AY465906.1| Tropaeolum majus sterol delta-7 reductase mRNA, complete cds
          Length = 1604

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 106/132 (80%)
 Strand = Plus / Minus

                                                                        
Query: 403  cttccagtacttgccgtactttgttgagcatctatcatcatccctcttcgctcggtcaag 462
            |||||||||||| || ||||| | |  |||||  |||||||| || || |||||||||| 
Sbjct: 1296 cttccagtactttccatacttggatctgcatcggtcatcatctcttttggctcggtcaaa 1237

                                                                        
Query: 463  cagtagaatggtcagaaatatcacatagaagtatggcataaaatgagtgaaaagagctgg 522
             || || ||||| || || | ||| |||||||| || | || |||| |||||||||||||
Sbjct: 1236 gagaaggatggtaaggaacaccacgtagaagtacggaagaacatgattgaaaagagctgg 1177

                        
Query: 523  aacggtccagaa 534
             |||||||||||
Sbjct: 1176 gacggtccagaa 1165



to top

>gb|BT014090.1| Lycopersicon esculentum clone 133194F, mRNA sequence
          Length = 1512

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 68/82 (82%)
 Strand = Plus / Minus

                                                                        
Query: 510  tgaaaagagctggaacggtccagaaaaatgctgctaggatctctggggcatagtgaaagt 569
            ||||||||||||| ||  ||||||||||||| ||||  || |||||  ||||||| || |
Sbjct: 1179 tgaaaagagctggtacactccagaaaaatgccgctaatatttctggaacatagtggaaat 1120

                                  
Query: 570  gacgagaaaagccccaccatcc 591
            | ||||  ||||||||||||||
Sbjct: 1119 ggcgagctaagccccaccatcc 1098



to top

>ref|NM_103926.3| Arabidopsis thaliana DWF5 (DWARF 5); sterol delta7 reductase
            AT1G50430 (DWF5) mRNA, complete cds
          Length = 1612

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 581  ccccaccatccagaagtcaagagaagactggtttttgtttc 621
            |||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 1157 ccccaccatccagacgttaagagaagactagttttagtttc 1117



to top

>gb|BT000245.1| Arabidopsis thaliana sterol delta7 reductase (At1g50430) mRNA,
            complete cds
          Length = 1401

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 581  ccccaccatccagaagtcaagagaagactggtttttgtttc 621
            |||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 1073 ccccaccatccagacgttaagagaagactagttttagtttc 1033



to top

>gb|AY099589.1| Arabidopsis thaliana sterol delta7 reductase (At1g50430) mRNA,
            complete cds
          Length = 1547

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 581  ccccaccatccagaagtcaagagaagactggtttttgtttc 621
            |||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 1124 ccccaccatccagacgttaagagaagactagttttagtttc 1084



to top

>gb|DQ122179.1| Gossypium hirsutum sterol delta-7 reductase DWF5 mRNA, complete cds
          Length = 1666

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 145/185 (78%)
 Strand = Plus / Minus

                                                                        
Query: 437  tcatcatccctcttcgctcggtcaagcagtagaatggtcagaaatatcacatagaagtat 496
            |||||||||||||| |||||||| |  |  || ||||| ||||| |  || |||||||||
Sbjct: 1271 tcatcatccctcttggctcggtcgaataagaggatggtaagaaacacgacgtagaagtat 1212

                                                                        
Query: 497  ggcataaaatgagtgaaaagagctggaacggtccagaaaaatgctgctaggatctctggg 556
            |||| ||||||  |||| | ||| ||||| ||||| || ||||| ||||  || ||||| 
Sbjct: 1211 ggcagaaaatggttgaataaagccggaacagtccaaaagaatgcagctaatatttctggc 1152

                                                                        
Query: 557  gcatagtgaaagtgacgagaaaagccccaccatccagaagtcaagagaagactggttttt 616
             |||| || || |||||||  || | ||||||||| || || || ||||| |||||||| 
Sbjct: 1151 acataatggaaatgacgagccaaacaccaccatcccgatgttaaaagaaggctggttttg 1092

                 
Query: 617  gtttc 621
            |||||
Sbjct: 1091 gtttc 1087



to top

>emb|BX814766.1|CNS0ADP2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB93ZC07 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1549

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 581  ccccaccatccagaagtcaagagaagactggtttttgtttc 621
            |||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 1157 ccccaccatccagacgttaagagaagactagttttagtttc 1117



to top

>emb|BX816975.1|CNS0ADC4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH79ZD11 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 569

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 581 ccccaccatccagaagtcaagagaagactggtttttgtttc 621
           |||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 138 ccccaccatccagacgttaagagaagactagttttagtttc 98



to top

>emb|BX815520.1|CNS0ACRS Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS69ZH02 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1484

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 581  ccccaccatccagaagtcaagagaagactggtttttgtttc 621
            |||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 1097 ccccaccatccagacgttaagagaagactagttttagtttc 1057



to top

>emb|BX815483.1|CNS0ACUG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS65ZC11 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1382

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 581  ccccaccatccagaagtcaagagaagactggtttttgtttc 621
            |||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 1118 ccccaccatccagacgttaagagaagactagttttagtttc 1078



to top

>emb|BX815400.1|CNS0ACTM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS57ZH04 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1486

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 581  ccccaccatccagaagtcaagagaagactggtttttgtttc 621
            |||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 1147 ccccaccatccagacgttaagagaagactagttttagtttc 1107



to top

>emb|BX815175.1|CNS0ACTH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS3ZC11 of Adult vegetative tissue of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1558

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 581  ccccaccatccagaagtcaagagaagactggtttttgtttc 621
            |||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 1159 ccccaccatccagacgttaagagaagactagttttagtttc 1119



to top

>emb|BX818511.1|CNS0ACIW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTSIL83ZC04 of Silique of strain col-0 of Arabidopsis
            thaliana (thale cress)
          Length = 1437

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 581  ccccaccatccagaagtcaagagaagactggtttttgtttc 621
            |||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 1153 ccccaccatccagacgttaagagaagactagttttagtttc 1113



to top

>gb|U49398.1|ATU49398 Arabidopsis thaliana sterol delta-7 reductase (ST7R) mRNA, complete
            cds
          Length = 1497

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 581  ccccaccatccagaagtcaagagaagactggtttttgtttc 621
            |||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 1148 ccccaccatccagacgttaagagaagactagttttagtttc 1108



to top

>gb|M27821.1|MZENAR Maize NADH:nitrate reductase (NR) mRNA, 3' end
          Length = 2126

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 406 ccagtacttgccgtactttgttg 428
           |||||||||||||||||||||||
Sbjct: 411 ccagtacttgccgtactttgttg 389



to top

>gb|AF523077.1| Acacia lycopodiifolia trnK gene, partial sequence; and maturase-like
            protein gene, partial cds; chloroplast genes for
            chloroplast products
          Length = 2034

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 150  aaaatcatgtgaaaaagcttgataca 175
            |||||||| |||||||||||||||||
Sbjct: 1821 aaaatcatatgaaaaagcttgataca 1846



to top

>gb|AF523076.1| Acacia adoxa chloroplast trnK gene, intron sequence; and
            maturase-like sequence
          Length = 2443

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 150  aaaatcatgtgaaaaagcttgataca 175
            |||||||| |||||||||||||||||
Sbjct: 1807 aaaatcatatgaaaaagcttgataca 1832



to top

>gb|DQ371879.1| Acacia lycopodifolia voucher CANB 615616 trnK gene, partial sequence;
            chloroplast
          Length = 1981

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 150  aaaatcatgtgaaaaagcttgataca 175
            |||||||| |||||||||||||||||
Sbjct: 1768 aaaatcatatgaaaaagcttgataca 1793



to top

>gb|AF239701.1| Arabidopsis thaliana sterol delta7 reductase (DWARF5) gene, complete
            cds
          Length = 4880

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 584  caccatccagaagtcaagagaagactggtttttgtttc 621
            ||||||||||| || ||||||||||| ||||| |||||
Sbjct: 3561 caccatccagacgttaagagaagactagttttagtttc 3524



to top

>gb|AC074124.4| Homo sapiens BAC clone RP11-763F8 from 4, complete sequence
          Length = 165723

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 601   gagaagactggtttttgtttct 622
             ||||||||||||||||||||||
Sbjct: 95641 gagaagactggtttttgtttct 95662



to top

>gb|AC012561.2|AC012561 Arabidopsis thaliana chromosome I BAC F11F12 genomic sequence, complete
             sequence
          Length = 105733

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 584   caccatccagaagtcaagagaagactggtttttgtttc 621
             ||||||||||| || ||||||||||| ||||| |||||
Sbjct: 94366 caccatccagacgttaagagaagactagttttagtttc 94329



to top

>gb|AC129552.20| Mus musculus chromosome 5, clone RP24-122N24, complete sequence
          Length = 153520

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 500  ataaaatgagtgaaaagagctggaa 524
            ||||||||| |||||||||||||||
Sbjct: 2701 ataaaatgaatgaaaagagctggaa 2725



to top

>gb|AC103975.9| Homo sapiens chromosome 15, clone RP11-1001M11, complete sequence
          Length = 213676

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 390   tgttgcagtacatcttccagt 410
             |||||||||||||||||||||
Sbjct: 40499 tgttgcagtacatcttccagt 40519



to top

>gb|AC091523.23| Mus musculus strain C57BL/6J clone rp23-77a8 map 1, complete sequence
          Length = 235509

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 81     taaaaacctagagaacatagctctc 105
              |||||||||||| ||||||||||||
Sbjct: 172389 taaaaacctagaaaacatagctctc 172413



to top

>gb|AC158228.3| Mus musculus chromosome 5, clone RP23-118K12, complete sequence
          Length = 208055

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 600   agagaagactggtttttgttt 620
             |||||||||||||||||||||
Sbjct: 21087 agagaagactggtttttgttt 21067



to top

>gb|AC158930.3| Mus musculus chromosome 1, clone RP23-244J9, complete sequence
          Length = 214509

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 81    taaaaacctagagaacatagctctc 105
             |||||||||||| ||||||||||||
Sbjct: 10877 taaaaacctagaaaacatagctctc 10901



to top

>gb|AC163270.5| Mus musculus chromosome 1, clone RP24-292B21, complete sequence
          Length = 154928

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 114   aagagtagttcattttcattt 134
             |||||||||||||||||||||
Sbjct: 99239 aagagtagttcattttcattt 99219



to top

>gb|AC022748.10| Homo sapiens chromosome 15, clone RP11-160C18, complete sequence
          Length = 163642

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 390    tgttgcagtacatcttccagt 410
              |||||||||||||||||||||
Sbjct: 102897 tgttgcagtacatcttccagt 102877



to top

>gb|AC182398.3| Pan troglodytes BAC clone CH251-119B5 from chromosome 15, complete
            sequence
          Length = 150565

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 390  tgttgcagtacatcttccagt 410
            |||||||||||||||||||||
Sbjct: 7016 tgttgcagtacatcttccagt 6996



to top

>gb|AC101455.9| Mus musculus chromosome 1, clone RP23-185E17, complete sequence
          Length = 185594

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 114    aagagtagttcattttcattt 134
              |||||||||||||||||||||
Sbjct: 139078 aagagtagttcattttcattt 139098



to top

>gb|AC068338.14| Homo sapiens chromosome 15, clone RP11-817O13, complete sequence
          Length = 174192

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 390   tgttgcagtacatcttccagt 410
             |||||||||||||||||||||
Sbjct: 64285 tgttgcagtacatcttccagt 64265



to top

>gb|AC105137.17| Homo sapiens chromosome 15, clone CTD-2562G15, complete sequence
          Length = 178059

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 390  tgttgcagtacatcttccagt 410
            |||||||||||||||||||||
Sbjct: 8091 tgttgcagtacatcttccagt 8111



to top

>emb|BX005036.6| Mouse DNA sequence from clone RP23-185E17 on chromosome 1, complete
              sequence
          Length = 185591

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 114    aagagtagttcattttcattt 134
              |||||||||||||||||||||
Sbjct: 139075 aagagtagttcattttcattt 139095



to top

>gb|AC114984.18| Mus musculus chromosome 18, clone RP23-248F9, complete sequence
          Length = 185563

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 484   cacatagaagtatggcataa 503
             ||||||||||||||||||||
Sbjct: 94605 cacatagaagtatggcataa 94586



to top

>gb|DQ481668.1| Takifugu rubripes HoxDa gene cluster, complete sequence
          Length = 366816

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 501    taaaatgagtgaaaagagctggaa 524
              ||||||||||||||| ||||||||
Sbjct: 239741 taaaatgagtgaaaatagctggaa 239764



to top

>emb|BX677675.9| Zebrafish DNA sequence from clone DKEYP-90G12 in linkage group 2,
             complete sequence
          Length = 124301

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    catcaaagtgaaactagaga 51
             ||||||||||||||||||||
Sbjct: 31501 catcaaagtgaaactagaga 31520



to top

>gb|AC132357.3| Mus musculus BAC clone RP24-120G2 from chromosome 18, complete sequence
          Length = 189088

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 484   cacatagaagtatggcataa 503
             ||||||||||||||||||||
Sbjct: 65721 cacatagaagtatggcataa 65740



to top

>gb|AE014303.1| Homo sapiens chromosome 13q34 schizophrenia region contig 2 section 3
            of 3 of the complete sequence
          Length = 209806

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 499  cataaaatgagtgaaaagag 518
            ||||||||||||||||||||
Sbjct: 5507 cataaaatgagtgaaaagag 5526



to top

>gb|AC150314.5| Mus musculus BAC clone RP23-269O24 from chromosome 10, complete
             sequence
          Length = 243006

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 421   ctttgttgagcatctatcat 440
             ||||||||||||||||||||
Sbjct: 59877 ctttgttgagcatctatcat 59896



to top

>emb|AL160153.11| Human DNA sequence from clone RP11-397O8 on chromosome 13 Contains the
             3' end of the ITGBL1 gene for integrin, beta-like 1 (with
             EGF-like repeat domains), a novel gene, the 3' end of the
             FGF14 gene for fibroblast growth factor 14 and a
             high-mobility group box 1 (HMGB1) pseudogene, complete
             sequence
          Length = 147607

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 499   cataaaatgagtgaaaagag 518
             ||||||||||||||||||||
Sbjct: 57272 cataaaatgagtgaaaagag 57291



to top

>gb|AC164154.2| Mus musculus chromosome 18, clone RP23-60G12, complete sequence
          Length = 238662

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 484   cacatagaagtatggcataa 503
             ||||||||||||||||||||
Sbjct: 34163 cacatagaagtatggcataa 34182



to top

>emb|BX294154.1| Pirellula sp. strain 1 complete genome; segment 22/24
          Length = 299050

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 518   gctggaacggtccagaaaaa 537
             ||||||||||||||||||||
Sbjct: 78896 gctggaacggtccagaaaaa 78915



to top

>emb|AL391737.2|CNS06C8G chromosome I of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 209982

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    aaaaataaaaacctagagaa 95
             ||||||||||||||||||||
Sbjct: 41464 aaaaataaaaacctagagaa 41445



to top

>emb|CR860142.1| Pongo pygmaeus mRNA; cDNA DKFZp469G1019 (from clone DKFZp469G1019)
          Length = 3770

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 572  cgagaaaagccccaccatccagaa 595
            |||| |||||||||||||||||||
Sbjct: 1728 cgagcaaagccccaccatccagaa 1705



to top

>emb|CR556722.7| Zebrafish DNA sequence from clone CH211-195N12 in linkage group 13,
              complete sequence
          Length = 205873

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 603    gaagactggtttttgtttct 622
              ||||||||||||||||||||
Sbjct: 120664 gaagactggtttttgtttct 120645



to top

>ref|XM_680543.1| PREDICTED: Danio rerio similar to Leucine zipper-EF-hand containing
           transmembrane protein 1, mitochondrial precursor
           (LOC557464), partial mRNA
          Length = 1296

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 603 gaagactggtttttgtttct 622
           ||||||||||||||||||||
Sbjct: 741 gaagactggtttttgtttct 760



to top

>gb|AE008685.1|AE008685 Mus musculus T-cell receptor alpha/delta locus  section 3 of 4 of the
              complete region
          Length = 400099

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 369    gaacaaccctgtaaggtact 388
              ||||||||||||||||||||
Sbjct: 243004 gaacaaccctgtaaggtact 242985



to top

>gb|AE008684.1|AE008684 Mus musculus T-cell receptor alpha/delta locus  section 2 of 4 of the
              complete region
          Length = 400099

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 369    gaacaaccctgtaaggtact 388
              ||||||||||||||||||||
Sbjct: 204838 gaacaaccctgtaaggtact 204819



to top

>gb|AC008872.6| Homo sapiens chromosome 5 clone CTD-2198D21, complete sequence
          Length = 128703

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 351  ccattcagtaaataccaggaacaa 374
            |||| |||||||||||||||||||
Sbjct: 9692 ccatgcagtaaataccaggaacaa 9715



to top

>gb|AC158239.2| Mus musculus BAC clone RP23-48A24 from chromosome 10, complete sequence
          Length = 256496

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 421   ctttgttgagcatctatcat 440
             ||||||||||||||||||||
Sbjct: 28354 ctttgttgagcatctatcat 28335



to top

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 115      agagtagttcattttcattt 134
                ||||||||||||||||||||
Sbjct: 16985920 agagtagttcattttcattt 16985901



to top

>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0488D02
          Length = 154537

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 115    agagtagttcattttcattt 134
              ||||||||||||||||||||
Sbjct: 115733 agagtagttcattttcattt 115714



to top

>emb|BX119973.7| Zebrafish DNA sequence from clone RP71-77D7 in linkage group 13,
             complete sequence
          Length = 182073

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 603   gaagactggtttttgtttct 622
             ||||||||||||||||||||
Sbjct: 52012 gaagactggtttttgtttct 51993



to top

>gb|AC005402.1|AC005402 Mus musculus clone UWGC:mbac37 from 14D1-D2 (T-Cell Receptor Alpha
              Locus), complete sequence
          Length = 132090

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 369    gaacaaccctgtaaggtact 388
              ||||||||||||||||||||
Sbjct: 111955 gaacaaccctgtaaggtact 111936



to top

>gb|AC003997.1|AC003997 Mouse BAC mbac20 from 14D1-D2 (T-Cell Receptor Alpha Locus), complete
             sequence
          Length = 122176

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 369   gaacaaccctgtaaggtact 388
             ||||||||||||||||||||
Sbjct: 88417 gaacaaccctgtaaggtact 88398



to top

>gb|AC140787.4| Mus musculus BAC clone RP23-411H17 from 10, complete sequence
          Length = 217336

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 421   ctttgttgagcatctatcat 440
             ||||||||||||||||||||
Sbjct: 88257 ctttgttgagcatctatcat 88238



to top

>emb|AL844609.6| Mouse DNA sequence from clone RP23-356F8 on chromosome 4, complete
              sequence
          Length = 191676

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 597    tcaagagaagactggtttttgttt 620
              ||||||||||||| ||||||||||
Sbjct: 115144 tcaagagaagacttgtttttgttt 115121


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,956,370
Number of Sequences: 3902068
Number of extensions: 6956370
Number of successful extensions: 119474
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 119255
Number of HSP's gapped (non-prelim): 219
length of query: 671
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 648
effective length of database: 17,143,297,704
effective search space: 11108856912192
effective search space used: 11108856912192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top