Clone Name | rbasd23k07 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | MYT1_MOUSE (Q8CFC2) Myelin transcription factor 1 (MyT1) (Neural... | 30 | 3.9 | 2 | MYT1_HUMAN (Q01538) Myelin transcription factor 1 (MyT1) (MyTI) ... | 30 | 3.9 | 3 | UREE_SYNEL (Q8DJ62) Urease accessory protein ureE | 29 | 8.6 | 4 | MYT1_XENLA (P70047) Myelin transcription factor 1 (X-MyT1) | 29 | 8.6 |
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>MYT1_MOUSE (Q8CFC2) Myelin transcription factor 1 (MyT1) (Neural zinc finger| factor 2) (NZF-2) Length = 1127 Score = 30.4 bits (67), Expect = 3.9 Identities = 17/50 (34%), Positives = 25/50 (50%) Frame = -3 Query: 527 EEEAINSEVQSQRVSWAMDLKGLEAKKKVLEEQGPVALESFHGLLDITLQ 378 E EA ++QSQ S +LK +E + K++EEQ GL +Q Sbjct: 1022 EMEAAMVQLQSQISSMEKNLKNIEEENKLIEEQNEALFLELSGLSQALIQ 1071
>MYT1_HUMAN (Q01538) Myelin transcription factor 1 (MyT1) (MyTI) (Proteolipid| protein-binding protein) (PLPB1) Length = 1121 Score = 30.4 bits (67), Expect = 3.9 Identities = 17/50 (34%), Positives = 25/50 (50%) Frame = -3 Query: 527 EEEAINSEVQSQRVSWAMDLKGLEAKKKVLEEQGPVALESFHGLLDITLQ 378 E EA ++QSQ S +LK +E + K++EEQ GL +Q Sbjct: 1020 EMEAAMVQLQSQISSMEKNLKNIEEENKLIEEQNEALFLELSGLSQALIQ 1069
>UREE_SYNEL (Q8DJ62) Urease accessory protein ureE| Length = 144 Score = 29.3 bits (64), Expect = 8.6 Identities = 19/52 (36%), Positives = 25/52 (48%) Frame = -2 Query: 252 RMSGRLHCHFDRELSIYLSILGQKLVLYVGQVMRVLSLV*MITVCRKERPWL 97 R RLHCH D S+YL L + + L G +R ++TV K P L Sbjct: 27 RCRRRLHCHSDEGESLYLK-LPRGITLQPGDRLRDEDATVIVTVHAKPEPTL 77
>MYT1_XENLA (P70047) Myelin transcription factor 1 (X-MyT1)| Length = 1122 Score = 29.3 bits (64), Expect = 8.6 Identities = 16/45 (35%), Positives = 24/45 (53%) Frame = -3 Query: 530 MEEEAINSEVQSQRVSWAMDLKGLEAKKKVLEEQGPVALESFHGL 396 ME + +N +QSQ + +LK +E + KV+EEQ GL Sbjct: 1018 MEADMVN--LQSQITTMEKNLKNIEEENKVIEEQNEALFVELSGL 1060 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,425,201 Number of Sequences: 219361 Number of extensions: 1449253 Number of successful extensions: 3910 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 3797 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3909 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4986986160 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)