ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd23k06 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK068011.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130D24, full insert sequence Length = 1172 Score = 297 bits (150), Expect = 3e-77 Identities = 330/390 (84%) Strand = Plus / Minus Query: 322 ttcttcacctctggtttaagcactaaaacccttgtgtgtggcactccacgggttggttgg 381 |||||||||| || ||||||||||||||||| | || |||| |||||| ||||||| || Sbjct: 867 ttcttcacctatgatttaagcactaaaacccctatgggtggaactccaggggttggaggg 808 Query: 382 gaagctcgtgcacgcctgagcagcaacctttgccatcgcttcaggaacaatgccggcatt 441 | ||| ||||| ||||| ||||||||||||||||||||||||| | ||||| ||||| Sbjct: 807 aatgctggtgcaagcctgcgcagcaacctttgccatcgcttcagcagagatgccagcatt 748 Query: 442 acacatgtttgcaaaggaccgcatgtgcttcattccatactgcgccaacgagccacattg 501 || |||||||||||||| ||||| |||||||||||||||||||| | |||||| ||||| Sbjct: 747 gcagatgtttgcaaaggaacgcatatgcttcattccatactgcgctagcgagccgcattg 688 Query: 502 ggattcaaaagtacgcaccgtagacttgagacaactccagtcatccacaagaggctcacc 561 | ||| ||||| || ||| ||||||||||||||||||||||||| |||||||| || || Sbjct: 687 tgcttcgaaagtgcgtaccatagacttgagacaactccagtcatcaacaagaggttcgcc 628 Query: 562 agctgggcgaacagtctttagaaccattggaccacccgcagaaccaaacagaaggtttcc 621 || || ||||||| |||||||||| |||| || || |||| ||||| ||||||||||| Sbjct: 627 agttgcacgaacagcctttagaacccttgggccttcctcagagccaaagagaaggtttcc 568 Query: 622 aatcagctcaacgctgctgtcaatatgagatctatgacccatcatttcgagcaattgctt 681 ||||||||||| ||| |||||| ||||||||| || |||||||||| ||||||||||| Sbjct: 567 gatcagctcaacactgttgtcaacatgagatctgtgtgccatcatttcaagcaattgctt 508 Query: 682 acgagcattgtttttcgcaggggagctctc 711 ||||| | ||||||| |||| || ||||| Sbjct: 507 ccgagcttcgtttttctcaggagaactctc 478
>dbj|AK067597.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108L21, full insert sequence Length = 1938 Score = 297 bits (150), Expect = 3e-77 Identities = 330/390 (84%) Strand = Plus / Minus Query: 322 ttcttcacctctggtttaagcactaaaacccttgtgtgtggcactccacgggttggttgg 381 |||||||||| || ||||||||||||||||| | || |||| |||||| ||||||| || Sbjct: 1633 ttcttcacctatgatttaagcactaaaacccctatgggtggaactccaggggttggaggg 1574 Query: 382 gaagctcgtgcacgcctgagcagcaacctttgccatcgcttcaggaacaatgccggcatt 441 | ||| ||||| ||||| ||||||||||||||||||||||||| | ||||| ||||| Sbjct: 1573 aatgctggtgcaagcctgcgcagcaacctttgccatcgcttcagcagagatgccagcatt 1514 Query: 442 acacatgtttgcaaaggaccgcatgtgcttcattccatactgcgccaacgagccacattg 501 || |||||||||||||| ||||| |||||||||||||||||||| | |||||| ||||| Sbjct: 1513 gcagatgtttgcaaaggaacgcatatgcttcattccatactgcgctagcgagccgcattg 1454 Query: 502 ggattcaaaagtacgcaccgtagacttgagacaactccagtcatccacaagaggctcacc 561 | ||| ||||| || ||| ||||||||||||||||||||||||| |||||||| || || Sbjct: 1453 tgcttcgaaagtgcgtaccatagacttgagacaactccagtcatcaacaagaggttcgcc 1394 Query: 562 agctgggcgaacagtctttagaaccattggaccacccgcagaaccaaacagaaggtttcc 621 || || ||||||| |||||||||| |||| || || |||| ||||| ||||||||||| Sbjct: 1393 agttgcacgaacagcctttagaacccttgggccttcctcagagccaaagagaaggtttcc 1334 Query: 622 aatcagctcaacgctgctgtcaatatgagatctatgacccatcatttcgagcaattgctt 681 ||||||||||| ||| |||||| ||||||||| || |||||||||| ||||||||||| Sbjct: 1333 gatcagctcaacactgttgtcaacatgagatctgtgtgccatcatttcaagcaattgctt 1274 Query: 682 acgagcattgtttttcgcaggggagctctc 711 ||||| | ||||||| |||| || ||||| Sbjct: 1273 ccgagcttcgtttttctcaggagaactctc 1244
>dbj|AB025310.1| Oryza sativa mRNA for asparaginyl endopeptidase, complete cds Length = 1866 Score = 297 bits (150), Expect = 3e-77 Identities = 330/390 (84%) Strand = Plus / Minus Query: 322 ttcttcacctctggtttaagcactaaaacccttgtgtgtggcactccacgggttggttgg 381 |||||||||| || ||||||||||||||||| | || |||| |||||| ||||||| || Sbjct: 1537 ttcttcacctatgatttaagcactaaaacccctatgggtggaactccaggggttggaggg 1478 Query: 382 gaagctcgtgcacgcctgagcagcaacctttgccatcgcttcaggaacaatgccggcatt 441 | ||| ||||| ||||| ||||||||||||||||||||||||| | ||||| ||||| Sbjct: 1477 aatgctggtgcaagcctgcgcagcaacctttgccatcgcttcagcagagatgccagcatt 1418 Query: 442 acacatgtttgcaaaggaccgcatgtgcttcattccatactgcgccaacgagccacattg 501 || |||||||||||||| ||||| |||||||||||||||||||| | |||||| ||||| Sbjct: 1417 gcagatgtttgcaaaggaacgcatatgcttcattccatactgcgctagcgagccgcattg 1358 Query: 502 ggattcaaaagtacgcaccgtagacttgagacaactccagtcatccacaagaggctcacc 561 | ||| ||||| || ||| ||||||||||||||||||||||||| |||||||| || || Sbjct: 1357 tgcttcgaaagtgcgtaccatagacttgagacaactccagtcatcaacaagaggttcgcc 1298 Query: 562 agctgggcgaacagtctttagaaccattggaccacccgcagaaccaaacagaaggtttcc 621 || || ||||||| |||||||||| |||| || || |||| ||||| ||||||||||| Sbjct: 1297 agttgcacgaacagcctttagaacccttgggccttcctcagagccaaagagaaggtttcc 1238 Query: 622 aatcagctcaacgctgctgtcaatatgagatctatgacccatcatttcgagcaattgctt 681 ||||||||||| ||| |||||| ||||||||| || |||||||||| ||||||||||| Sbjct: 1237 gatcagctcaacactgttgtcaacatgagatctgtgtgccatcatttcaagcaattgctt 1178 Query: 682 acgagcattgtttttcgcaggggagctctc 711 ||||| | ||||||| |||| || ||||| Sbjct: 1177 ccgagcttcgtttttctcaggagaactctc 1148
>ref|NM_193501.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1506 Score = 283 bits (143), Expect = 4e-73 Identities = 317/375 (84%) Strand = Plus / Minus Query: 337 ttaagcactaaaacccttgtgtgtggcactccacgggttggttgggaagctcgtgcacgc 396 |||||||||||||||| | || |||| |||||| ||||||| || | ||| ||||| || Sbjct: 1506 ttaagcactaaaacccctatgggtggaactccaggggttggagggaatgctggtgcaagc 1447 Query: 397 ctgagcagcaacctttgccatcgcttcaggaacaatgccggcattacacatgtttgcaaa 456 ||| ||||||||||||||||||||||||| | ||||| ||||| || ||||||||||| Sbjct: 1446 ctgcgcagcaacctttgccatcgcttcagcagagatgccagcattgcagatgtttgcaaa 1387 Query: 457 ggaccgcatgtgcttcattccatactgcgccaacgagccacattgggattcaaaagtacg 516 ||| ||||| |||||||||||||||||||| | |||||| ||||| | ||| ||||| || Sbjct: 1386 ggaacgcatatgcttcattccatactgcgctagcgagccgcattgtgcttcgaaagtgcg 1327 Query: 517 caccgtagacttgagacaactccagtcatccacaagaggctcaccagctgggcgaacagt 576 ||| ||||||||||||||||||||||||| |||||||| || |||| || ||||||| Sbjct: 1326 taccatagacttgagacaactccagtcatcaacaagaggttcgccagttgcacgaacagc 1267 Query: 577 ctttagaaccattggaccacccgcagaaccaaacagaaggtttccaatcagctcaacgct 636 |||||||||| |||| || || |||| ||||| ||||||||||| ||||||||||| || Sbjct: 1266 ctttagaacccttgggccttcctcagagccaaagagaaggtttccgatcagctcaacact 1207 Query: 637 gctgtcaatatgagatctatgacccatcatttcgagcaattgcttacgagcattgttttt 696 | |||||| ||||||||| || |||||||||| ||||||||||| ||||| | |||||| Sbjct: 1206 gttgtcaacatgagatctgtgtgccatcatttcaagcaattgcttccgagcttcgttttt 1147 Query: 697 cgcaggggagctctc 711 | |||| || ||||| Sbjct: 1146 ctcaggagaactctc 1132
>emb|AJ131719.1|ZMA131719 Zea mays mRNA for legumain-like protease (see2a) Length = 1864 Score = 214 bits (108), Expect = 3e-52 Identities = 258/308 (83%) Strand = Plus / Minus Query: 344 ctaaaacccttgtgtgtggcactccacgggttggttgggaagctcgtgcacgcctgagca 403 |||||||||||||| | | |||||| ||||||| || | ||| ||||| ||||||||| Sbjct: 1483 ctaaaacccttgtggatagaactccaggggttggaaggaatgctggtgcaagcctgagca 1424 Query: 404 gcaacctttgccatcgcttcaggaacaatgccggcattacacatgtttgcaaaggaccgc 463 || ||||| | || |||||||||| ||||| || || || |||||||| ||||||||| Sbjct: 1423 gcgaccttcgacactgcttcaggaaggatgccagcgttgcagatgtttgcgaaggaccgc 1364 Query: 464 atgtgcttcattccatactgcgccaacgagccacattgggattcaaaagtacgcaccgta 523 ||||||||||| ||||||||||||||||| |||||||| | ||||||||||| ||||| Sbjct: 1363 atgtgcttcatcccatactgcgccaacgacccacattgcgcctcaaaagtacgaaccgtg 1304 Query: 524 gacttgagacaactccagtcatccacaagaggctcaccagctgggcgaacagtctttaga 583 ||||||||||| ||||| ||||| || |||||||||||||||| || || | || ||| Sbjct: 1303 gacttgagacagctccaatcatcgaccagaggctcaccagctgcacggacggctttcaga 1244 Query: 584 accattggaccacccgcagaaccaaacagaaggtttccaatcagctcaacgctgctgtca 643 ||| ||||||| || |||| ||||| |||||| ||||||| |||||||||||||||||| Sbjct: 1243 acccttggaccgtcctcagagccaaagagaaggcttccaatgagctcaacgctgctgtca 1184 Query: 644 atatgaga 651 | |||||| Sbjct: 1183 acatgaga 1176
>gb|AY104034.1| Zea mays PCO131778 mRNA sequence Length = 1981 Score = 208 bits (105), Expect = 2e-50 Identities = 300/365 (82%) Strand = Plus / Minus Query: 344 ctaaaacccttgtgtgtggcactccacgggttggttgggaagctcgtgcacgcctgagca 403 |||||||||||||| | | |||||| ||||||| || | ||| ||||| ||||||||| Sbjct: 1521 ctaaaacccttgtggatagaactccaggggttggaaggaatgctggtgcaagcctgagca 1462 Query: 404 gcaacctttgccatcgcttcaggaacaatgccggcattacacatgtttgcaaaggaccgc 463 || ||||| | || |||||||||| ||||| || || || |||||||| ||||||||| Sbjct: 1461 gcgaccttcgacactgcttcaggaaggatgccagcgttgcagatgtttgcgaaggaccgc 1402 Query: 464 atgtgcttcattccatactgcgccaacgagccacattgggattcaaaagtacgcaccgta 523 ||||||||||| ||||||||||||||||| |||||||| | ||||||||||| ||||| Sbjct: 1401 atgtgcttcatcccatactgcgccaacgacccacattgcgcctcaaaagtacgaaccgtg 1342 Query: 524 gacttgagacaactccagtcatccacaagaggctcaccagctgggcgaacagtctttaga 583 ||||||||||| ||||| ||||| || |||||||||||||||| || || | || ||| Sbjct: 1341 gacttgagacagctccaatcatcgaccagaggctcaccagctgcacggacggctttcaga 1282 Query: 584 accattggaccacccgcagaaccaaacagaaggtttccaatcagctcaacgctgctgtca 643 ||| ||||||| || |||| ||||| |||||| ||||||| |||||||| ||||||||| Sbjct: 1281 acccttggaccgtcctcagagccaaagagaaggcttccaatgagctcaacactgctgtca 1222 Query: 644 atatgagatctatgacccatcatttcgagcaattgcttacgagcattgtttttcgcaggg 703 | |||||| || || |||||| ||| ||||| | ||| ||||| | |||||| |||| Sbjct: 1221 acatgagacctgtgggccatcacttcaagcaactccttccgagcttcatttttctcaggt 1162 Query: 704 gagct 708 ||||| Sbjct: 1161 gagct 1157
>gb|AF082347.1|AF082347 Zea mays C13 endopeptidase NP1 precursor, mRNA, complete cds Length = 1919 Score = 206 bits (104), Expect = 7e-50 Identities = 257/308 (83%) Strand = Plus / Minus Query: 344 ctaaaacccttgtgtgtggcactccacgggttggttgggaagctcgtgcacgcctgagca 403 |||||||||||||| | | |||||| ||||||| || | ||| ||||| ||||||||| Sbjct: 1518 ctaaaacccttgtggatagaactccaggggttggaaggaatgctggtgcaagcctgagca 1459 Query: 404 gcaacctttgccatcgcttcaggaacaatgccggcattacacatgtttgcaaaggaccgc 463 || ||||| | || |||||||||| ||||| || || || |||||||| ||||||||| Sbjct: 1458 gcgaccttcgacactgcttcaggaaggatgccagcgttgcagatgtttgcgaaggaccgc 1399 Query: 464 atgtgcttcattccatactgcgccaacgagccacattgggattcaaaagtacgcaccgta 523 ||||||||||| ||||||||||||||||| |||||||| | ||||||||||| ||||| Sbjct: 1398 atgtgcttcatcccatactgcgccaacgacccacattgcgcctcaaaagtacgaaccgtg 1339 Query: 524 gacttgagacaactccagtcatccacaagaggctcaccagctgggcgaacagtctttaga 583 ||||||||||| ||||| ||||| || |||||||||||||||| || || | || ||| Sbjct: 1338 gacttgagacagctccaatcatcgaccagaggctcaccagctgcacggacggctttcaga 1279 Query: 584 accattggaccacccgcagaaccaaacagaaggtttccaatcagctcaacgctgctgtca 643 ||| ||||||| || |||| ||||| |||||| ||||||| |||||||| ||||||||| Sbjct: 1278 acccttggaccgtcctcagagccaaagagaaggcttccaatgagctcaacactgctgtca 1219 Query: 644 atatgaga 651 | |||||| Sbjct: 1218 acatgaga 1211
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 155 bits (78), Expect = 2e-34 Identities = 162/190 (85%) Strand = Plus / Minus Query: 522 tagacttgagacaactccagtcatccacaagaggctcaccagctgggcgaacagtcttta 581 ||||||||||||||||||||||||| |||||||| || |||| || ||||||| ||||| Sbjct: 21230310 tagacttgagacaactccagtcatcaacaagaggttcgccagttgcacgaacagccttta 21230251 Query: 582 gaaccattggaccacccgcagaaccaaacagaaggtttccaatcagctcaacgctgctgt 641 ||||| |||| || || |||| ||||| ||||||||||| ||||||||||| ||| ||| Sbjct: 21230250 gaacccttgggccttcctcagagccaaagagaaggtttccgatcagctcaacactgttgt 21230191 Query: 642 caatatgagatctatgacccatcatttcgagcaattgcttacgagcattgtttttcgcag 701 ||| ||||||||| || |||||||||| ||||||||||| ||||| | ||||||| ||| Sbjct: 21230190 caacatgagatctgtgtgccatcatttcaagcaattgcttccgagcttcgtttttctcag 21230131 Query: 702 gggagctctc 711 | || ||||| Sbjct: 21230130 gagaactctc 21230121 Score = 151 bits (76), Expect = 4e-33 Identities = 154/180 (85%) Strand = Plus / Minus Query: 322 ttcttcacctctggtttaagcactaaaacccttgtgtgtggcactccacgggttggttgg 381 |||||||||| || ||||||||||||||||| | || |||| |||||| ||||||| || Sbjct: 21230711 ttcttcacctatgatttaagcactaaaacccctatgggtggaactccaggggttggaggg 21230652 Query: 382 gaagctcgtgcacgcctgagcagcaacctttgccatcgcttcaggaacaatgccggcatt 441 | ||| ||||| ||||| ||||||||||||||||||||||||| | ||||| ||||| Sbjct: 21230651 aatgctggtgcaagcctgcgcagcaacctttgccatcgcttcagcagagatgccagcatt 21230592 Query: 442 acacatgtttgcaaaggaccgcatgtgcttcattccatactgcgccaacgagccacattg 501 || |||||||||||||| ||||| |||||||||||||||||||| | |||||| ||||| Sbjct: 21230591 gcagatgtttgcaaaggaacgcatatgcttcattccatactgcgctagcgagccgcattg 21230532 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 118 ctactccctctgtaccataatat 140 ||||||||||||||||||||||| Sbjct: 33064943 ctactccctctgtaccataatat 33064921 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 115 gtactactccctctgtaccataatat 140 |||||||||||||||| ||||||||| Sbjct: 9559172 gtactactccctctgtcccataatat 9559147 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 174 tatttaggaacagagggagta 194 ||||||||||||||||||||| Sbjct: 40026738 tatttaggaacagagggagta 40026718 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 170 caagtatttaggaacagagggagta 194 |||||||||||||||| |||||||| Sbjct: 30068704 caagtatttaggaacaaagggagta 30068728 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactactccctctgtaccataatat 140 ||||||||||||||| ||||||||| Sbjct: 15541039 tactactccctctgtcccataatat 15541063 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 actactccctctgtaccataatat 140 |||||||||||||| ||||||||| Sbjct: 42078277 actactccctctgttccataatat 42078300 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 ctactccctctgtaccataa 137 |||||||||||||||||||| Sbjct: 18787268 ctactccctctgtaccataa 18787287
>dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1064G04 Length = 186704 Score = 155 bits (78), Expect = 2e-34 Identities = 162/190 (85%) Strand = Plus / Minus Query: 522 tagacttgagacaactccagtcatccacaagaggctcaccagctgggcgaacagtcttta 581 ||||||||||||||||||||||||| |||||||| || |||| || ||||||| ||||| Sbjct: 127819 tagacttgagacaactccagtcatcaacaagaggttcgccagttgcacgaacagccttta 127760 Query: 582 gaaccattggaccacccgcagaaccaaacagaaggtttccaatcagctcaacgctgctgt 641 ||||| |||| || || |||| ||||| ||||||||||| ||||||||||| ||| ||| Sbjct: 127759 gaacccttgggccttcctcagagccaaagagaaggtttccgatcagctcaacactgttgt 127700 Query: 642 caatatgagatctatgacccatcatttcgagcaattgcttacgagcattgtttttcgcag 701 ||| ||||||||| || |||||||||| ||||||||||| ||||| | ||||||| ||| Sbjct: 127699 caacatgagatctgtgtgccatcatttcaagcaattgcttccgagcttcgtttttctcag 127640 Query: 702 gggagctctc 711 | || ||||| Sbjct: 127639 gagaactctc 127630 Score = 151 bits (76), Expect = 4e-33 Identities = 154/180 (85%) Strand = Plus / Minus Query: 322 ttcttcacctctggtttaagcactaaaacccttgtgtgtggcactccacgggttggttgg 381 |||||||||| || ||||||||||||||||| | || |||| |||||| ||||||| || Sbjct: 128220 ttcttcacctatgatttaagcactaaaacccctatgggtggaactccaggggttggaggg 128161 Query: 382 gaagctcgtgcacgcctgagcagcaacctttgccatcgcttcaggaacaatgccggcatt 441 | ||| ||||| ||||| ||||||||||||||||||||||||| | ||||| ||||| Sbjct: 128160 aatgctggtgcaagcctgcgcagcaacctttgccatcgcttcagcagagatgccagcatt 128101 Query: 442 acacatgtttgcaaaggaccgcatgtgcttcattccatactgcgccaacgagccacattg 501 || |||||||||||||| ||||| |||||||||||||||||||| | |||||| ||||| Sbjct: 128100 gcagatgtttgcaaaggaacgcatatgcttcattccatactgcgctagcgagccgcattg 128041
>emb|AJ131718.1|ZMA131718 Zea mays mRNA for legumain-like protease (see2a) Length = 1569 Score = 115 bits (58), Expect = 2e-22 Identities = 289/366 (78%) Strand = Plus / Minus Query: 337 ttaagcactaaaacccttgtgtgtggcactccacgggttggttgggaagctcgtgcacgc 396 |||||| |||||||||||||| | | ||||| ||||||| || | ||| |||| || Sbjct: 1504 ttaagcgctaaaacccttgtggatagagctccaggggttggacggaatgctgctgcaggc 1445 Query: 397 ctgagcagcaacctttgccatcgcttcaggaacaatgccggcattacacatgtttgcaaa 456 |||||| || ||||| | || |||||||||| ||||| || || |||||||| || || Sbjct: 1444 ctgagcggccaccttcgacactgcttcaggaaggatgccagcgttgcacatgttcgcgaa 1385 Query: 457 ggaccgcatgtgcttcattccatactgcgccaacgagccacattgggattcaaaagtacg 516 ||| |||||||||||||| |||||||||||||| || || ||| | | |||||||| || Sbjct: 1384 ggatcgcatgtgcttcatcccatactgcgccaaggacccgcatcgcgcctcaaaagtgcg 1325 Query: 517 caccgtagacttgagacaactccagtcatccacaagaggctcaccagctgggcgaacagt 576 || | |||||||| || ||||| ||||| || ||||| ||||||| || || || | Sbjct: 1324 aactatggacttgaggcagctccaatcatcaaccagaggttcaccaggtgcacggacggc 1265 Query: 577 ctttagaaccattggaccacccgcagaaccaaacagaaggtttccaatcagctcaacgct 636 || |||||| ||||||| || |||| ||||| |||||| |||| || ||||||||||| Sbjct: 1264 tttcagaacccttggaccgtcctcagagccaaagagaaggcttccgatgagctcaacgct 1205 Query: 637 gctgtcaatatgagatctatgacccatcatttcgagcaattgcttacgagcattgttttt 696 |||||||| |||||| || || |||||| ||| |||| || ||| ||||| | | |||| Sbjct: 1204 gctgtcaacatgagacctgtgggccatcacttcaagcagttccttccgagcctcgctttt 1145 Query: 697 cgcagg 702 |||||| Sbjct: 1144 cgcagg 1139
>emb|AJ251454.1|ZMA251454 Zea mays see2b gene for putative legumain, exons 1-9 Length = 8994 Score = 105 bits (53), Expect = 2e-19 Identities = 143/173 (82%) Strand = Plus / Minus Query: 344 ctaaaacccttgtgtgtggcactccacgggttggttgggaagctcgtgcacgcctgagca 403 |||||||||||||| | | |||||| ||||||| || | ||| ||||| ||||||||| Sbjct: 5449 ctaaaacccttgtggatagaactccaggggttggaaggaatgctggtgcaagcctgagca 5390 Query: 404 gcaacctttgccatcgcttcaggaacaatgccggcattacacatgtttgcaaaggaccgc 463 || ||||| | || |||||||||| ||||| || || || ||||||| ||||||||| Sbjct: 5389 gcgaccttcgacactgcttcaggaaggatgccagcgttgcagatgtttgggaaggaccgc 5330 Query: 464 atgtgcttcattccatactgcgccaacgagccacattgggattcaaaagtacg 516 ||||||||||| ||||| ||||||||||| |||||||| | ||||||||||| Sbjct: 5329 atgtgcttcatcccatagtgcgccaacgacccacattgcgcctcaaaagtacg 5277 Score = 91.7 bits (46), Expect = 3e-15 Identities = 112/134 (83%) Strand = Plus / Minus Query: 518 accgtagacttgagacaactccagtcatccacaagaggctcaccagctgggcgaacagtc 577 ||||| ||||||||||| ||||| ||||| || |||||||||||||||| || || | Sbjct: 5172 accgtggacttgagacagctccaatcatcgacgagaggctcaccagctgcacggacggct 5113 Query: 578 tttagaaccattggaccacccgcagaaccaaacagaaggtttccaatcagctcaacgctg 637 || |||||| ||||||| || |||| ||||| |||||| ||||||| |||||||| ||| Sbjct: 5112 ttcagaacccttggaccgtcctcagagccaaagagaaggcttccaatgagctcaacactg 5053 Query: 638 ctgtcaatatgaga 651 ||||||| |||||| Sbjct: 5052 ctgtcaacatgaga 5039
>emb|AJ300144.1|HVU300144 Hordeum vulgare srg6 gene for stress responsive gene protein 6, exons 1-11, cultivar Morex Length = 4197 Score = 73.8 bits (37), Expect = 7e-10 Identities = 40/41 (97%) Strand = Plus / Minus Query: 155 agttctccccaacaacaagtatttaggaacagagggagtat 195 ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1520 agttccccccaacaacaagtatttaggaacagagggagtat 1480 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 155 agttctccccaacaacaagtatttaggaacagagggagtat 195 ||||||||||||||||||||||| || ||||||||||||| Sbjct: 1526 agttctccccaacaacaagtattgtggcacagagggagtat 1566
>emb|AJ251453.1|ZMA251453 Zea mays see2a gene for putative legumain, exons 1-9 Length = 6914 Score = 73.8 bits (37), Expect = 7e-10 Identities = 124/153 (81%) Strand = Plus / Minus Query: 337 ttaagcactaaaacccttgtgtgtggcactccacgggttggttgggaagctcgtgcacgc 396 |||||| |||||||||||||| | | ||||| ||||||| || | ||| |||| || Sbjct: 6872 ttaagcgctaaaacccttgtggatagagctccaggggttggacggaatgctgctgcaggc 6813 Query: 397 ctgagcagcaacctttgccatcgcttcaggaacaatgccggcattacacatgtttgcaaa 456 |||||| || ||||| | || |||||||||| ||||| || || |||||||| || || Sbjct: 6812 ctgagcggccaccttcgacactgcttcaggaaggatgccagcgttgcacatgttcgcgaa 6753 Query: 457 ggaccgcatgtgcttcattccatactgcgccaa 489 ||| |||||||||||||| |||||||||||||| Sbjct: 6752 ggatcgcatgtgcttcatcccatactgcgccaa 6720 Score = 65.9 bits (33), Expect = 2e-07 Identities = 141/177 (79%) Strand = Plus / Minus Query: 524 gacttgagacaactccagtcatccacaagaggctcaccagctgggcgaacagtctttaga 583 |||||||| || ||||| ||||| || ||||| ||||||| || || || | || ||| Sbjct: 6570 gacttgaggcagctccaatcatcaaccagaggttcaccaggtgcacggacggctttcaga 6511 Query: 584 accattggaccacccgcagaaccaaacagaaggtttccaatcagctcaacgctgctgtca 643 ||| ||||||| || | || ||||| |||||| ||||||| |||||||||||||||||| Sbjct: 6510 acccttggaccgtcctcggagccaaagagaaggcttccaatgagctcaacgctgctgtca 6451 Query: 644 atatgagatctatgacccatcatttcgagcaattgcttacgagcattgtttttcgca 700 | |||||| || || |||||| ||| |||| || ||| ||||| | ||||||||| Sbjct: 6450 acatgagacctgtgggccatcacttcaagcagttccttccgagcctcatttttcgca 6394
>emb|AJ437265.1|OSA437265 Oryza sativa partial mRNA for asparaginyl endopeptidase-like protein Length = 281 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 625 cagctcaacgctgctgtcaatatgagatctatgacccatcatttcgagcaattgcttacg 684 ||||||||| ||| |||||| ||||||||| || |||||||||| ||||||||||| || Sbjct: 191 cagctcaacactgttgtcaacatgagatctgtgtgccatcatttcaagcaattgcttccg 132 Query: 685 agcattgtttttc 697 ||| | ||||||| Sbjct: 131 agcttcgtttttc 119
>emb|Z47793.1|CSCYSPRNS C.sinensis mRNA for putative cystein proteinase Length = 1839 Score = 60.0 bits (30), Expect = 1e-05 Identities = 111/138 (80%) Strand = Plus / Minus Query: 439 attacacatgtttgcaaaggaccgcatgtgcttcattccatactgcgccaacgagccaca 498 |||||| |||||||||| || |||||||||||||||||||| |||| | | ||||| Sbjct: 1401 attacagatgtttgcaagagaacgcatgtgcttcattccatattgcgatagagctccaca 1342 Query: 499 ttgggattcaaaagtacgcaccgtagacttgagacaactccagtcatccacaagaggctc 558 || || |||||||| | |||| || ||||| || | ||||||||| |||||||||| Sbjct: 1341 gtgcgactcaaaagtcctcaccagtgatttgaggcagccccagtcatcaacaagaggctg 1282 Query: 559 accagctgggcgaacagt 576 |||||| || |||||||| Sbjct: 1281 accagcaggtcgaacagt 1264
>dbj|AB024006.1| Hordeum vulgare naat-B and naat-A genes for nicotianamine aminotransferase, complete cds Length = 10966 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 155 agttctccccaacaacaagtatttaggaacagaggga 191 |||||||||||||||||| ||||||| |||||||||| Sbjct: 5900 agttctccccaacaacaaatatttagaaacagaggga 5864
>gb|AF238384.1|AF238384 Vigna radiata asparaginyl endopeptidase (PE1) mRNA, complete cds Length = 1576 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Minus Query: 446 atgtttgcaaaggaccgcatgtgcttcattccatactg 483 |||||||||||||||| |||||| ||||| |||||||| Sbjct: 1361 atgtttgcaaaggacctcatgtgtttcatcccatactg 1324
>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes, complete cds Length = 65979 Score = 52.0 bits (26), Expect = 0.003 Identities = 26/26 (100%) Strand = Plus / Minus Query: 121 ctccctctgtaccataatatttgttg 146 |||||||||||||||||||||||||| Sbjct: 61058 ctccctctgtaccataatatttgttg 61033 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 174 tatttaggaacagagggagtatgat 198 ||||||||||| ||||||||||||| Sbjct: 60958 tatttaggaacggagggagtatgat 60934
>emb|AJ234802.1|HVU234802 Hordeum vulgare genomic DNA fragment; clone MWG2141.rev Length = 315 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Plus Query: 118 ctactccctctgtaccataatatttgttgccggggaga 155 |||||||||||||||||||||| |||| || ||||||| Sbjct: 187 ctactccctctgtaccataataattgtagctggggaga 224
>gb|AF108008.1|AF108008 Hordeum vulgare HV1LRR1 (HV1LRR1) gene, complete cds Length = 5163 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 165 aacaacaagtatttaggaacagagggagta 194 ||||||||||||||||||||||||| |||| Sbjct: 3117 aacaacaagtatttaggaacagaggtagta 3146
>emb|Y14573.1|HVCH4H Hordeum vulgare DNA for chromosome 4H Length = 59748 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 155 agttctccccaacaacaagtatttaggaacagaggga 191 ||||||||||||| ||||||||||| | ||||||||| Sbjct: 14698 agttctccccaactacaagtatttaagtacagaggga 14662 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 174 tatttaggaacagagggagta 194 ||||||||||||||||||||| Sbjct: 23417 tatttaggaacagagggagta 23437 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 171 aagtatttaggaacagagggagtat 195 |||||||||||||| |||||||||| Sbjct: 22949 aagtatttaggaacggagggagtat 22925
>ref|NM_128154.3| Arabidopsis thaliana ALPHA-VPE; cysteine-type endopeptidase/ legumain AT2G25940 (ALPHA-VPE) mRNA, complete cds Length = 2221 Score = 48.1 bits (24), Expect = 0.040 Identities = 48/56 (85%) Strand = Plus / Minus Query: 443 cacatgtttgcaaaggaccgcatgtgcttcattccatactgcgccaacgagccaca 498 ||||||||||||| |||| ||||||||| ||||| ||||| | |||||| ||||| Sbjct: 1339 cacatgtttgcaatcgacctcatgtgctttattccgtactgagacaacgatccaca 1284
>gb|AY133250.1|AY133250S1 Hordeum vulgare subsp. vulgare starch synthase II gene, exons 1 through 8 Length = 4976 Score = 48.1 bits (24), Expect = 0.040 Identities = 30/32 (93%) Strand = Plus / Minus Query: 164 caacaacaagtatttaggaacagagggagtat 195 ||||| |||||||||||| ||||||||||||| Sbjct: 2379 caacagcaagtatttaggtacagagggagtat 2348
>gb|AC005395.3| Arabidopsis thaliana chromosome 2 clone F17H15 map B68, complete sequence Length = 102004 Score = 48.1 bits (24), Expect = 0.040 Identities = 48/56 (85%) Strand = Plus / Minus Query: 443 cacatgtttgcaaaggaccgcatgtgcttcattccatactgcgccaacgagccaca 498 ||||||||||||| |||| ||||||||| ||||| ||||| | |||||| ||||| Sbjct: 12370 cacatgtttgcaatcgacctcatgtgctttattccgtactgagacaacgatccaca 12315
>gb|AC004747.3| Arabidopsis thaliana chromosome 2 clone T19L18 map B68, complete sequence Length = 87080 Score = 48.1 bits (24), Expect = 0.040 Identities = 48/56 (85%) Strand = Plus / Minus Query: 443 cacatgtttgcaaaggaccgcatgtgcttcattccatactgcgccaacgagccaca 498 ||||||||||||| |||| ||||||||| ||||| ||||| | |||||| ||||| Sbjct: 80894 cacatgtttgcaatcgacctcatgtgctttattccgtactgagacaacgatccaca 80839
>gb|AY090296.1| Arabidopsis thaliana At2g25940/F17H15.3 mRNA, complete cds Length = 1437 Score = 48.1 bits (24), Expect = 0.040 Identities = 48/56 (85%) Strand = Plus / Minus Query: 443 cacatgtttgcaaaggaccgcatgtgcttcattccatactgcgccaacgagccaca 498 ||||||||||||| |||| ||||||||| ||||| ||||| | |||||| ||||| Sbjct: 1331 cacatgtttgcaatcgacctcatgtgctttattccgtactgagacaacgatccaca 1276
>gb|AY058055.1| Arabidopsis thaliana At2g25940/F17H15.3 mRNA, complete cds Length = 1616 Score = 48.1 bits (24), Expect = 0.040 Identities = 48/56 (85%) Strand = Plus / Minus Query: 443 cacatgtttgcaaaggaccgcatgtgcttcattccatactgcgccaacgagccaca 498 ||||||||||||| |||| ||||||||| ||||| ||||| | |||||| ||||| Sbjct: 1339 cacatgtttgcaatcgacctcatgtgctttattccgtactgagacaacgatccaca 1284
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 48.1 bits (24), Expect = 0.040 Identities = 24/24 (100%) Strand = Plus / Minus Query: 174 tatttaggaacagagggagtatga 197 |||||||||||||||||||||||| Sbjct: 20360068 tatttaggaacagagggagtatga 20360045 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactactccctctgtaccataatat 140 ||||||||||||||| ||||||||| Sbjct: 24900619 tactactccctctgtcccataatat 24900643 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 tactactccctctgtaccataata 139 ||||||||||||||| |||||||| Sbjct: 16393867 tactactccctctgtcccataata 16393890
>dbj|AP005537.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056L09 Length = 152910 Score = 48.1 bits (24), Expect = 0.040 Identities = 24/24 (100%) Strand = Plus / Minus Query: 174 tatttaggaacagagggagtatga 197 |||||||||||||||||||||||| Sbjct: 107816 tatttaggaacagagggagtatga 107793
>dbj|D61393.2|ATHAVPEA Arabidopsis thaliana gene for alpha-VPE, complete cds Length = 4354 Score = 48.1 bits (24), Expect = 0.040 Identities = 48/56 (85%) Strand = Plus / Minus Query: 443 cacatgtttgcaaaggaccgcatgtgcttcattccatactgcgccaacgagccaca 498 ||||||||||||| |||| ||||||||| ||||| ||||| | |||||| ||||| Sbjct: 4081 cacatgtttgcaatcgacctcatgtgctttattccgtactgagacaacgatccaca 4026
>gb|AC149301.1| Solanum demissum chromosome 5 clone PGEC517A09 map MAP_LOC, complete sequence Length = 133983 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Plus Query: 169 acaagtatttaggaacagagggagtat 195 ||||||| ||||||||||||||||||| Sbjct: 99110 acaagtaattaggaacagagggagtat 99136
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 180 ggaacagagggagtatgatggaa 202 ||||||||||||||||||||||| Sbjct: 6845852 ggaacagagggagtatgatggaa 6845830 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 112 ttggtactactccctctgtaccataatat 140 |||||| |||||||||||| ||||||||| Sbjct: 19811897 ttggtagtactccctctgttccataatat 19811869 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 gtatttaggaacagagggagtatg 196 |||||||||||| ||||||||||| Sbjct: 9891773 gtatttaggaacggagggagtatg 9891796 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 attacacatgtttgcaaagg 458 |||||||||||||||||||| Sbjct: 234959 attacacatgtttgcaaagg 234978
>dbj|AP003368.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1100D10 Length = 152997 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 118 ctactccctctgtaccataatat 140 ||||||||||||||||||||||| Sbjct: 1853 ctactccctctgtaccataatat 1831
>dbj|AP003224.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0010B10 Length = 155263 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 118 ctactccctctgtaccataatat 140 ||||||||||||||||||||||| Sbjct: 131171 ctactccctctgtaccataatat 131149
>dbj|AP006464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1054C11 Length = 141529 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 180 ggaacagagggagtatgatggaa 202 ||||||||||||||||||||||| Sbjct: 137189 ggaacagagggagtatgatggaa 137167
>dbj|AP006156.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1043F11 Length = 167137 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 180 ggaacagagggagtatgatggaa 202 ||||||||||||||||||||||| Sbjct: 73747 ggaacagagggagtatgatggaa 73725
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 174 tatttaggaacagagggagtatgatg 199 ||||||||||| |||||||||||||| Sbjct: 57364 tatttaggaacggagggagtatgatg 57339
>gb|AY494981.1| Triticum turgidum A genome HMW glutenin A gene locus, sequence Length = 307015 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 169 acaagtatttaggaacagagggagta 194 |||||||||||||||| ||||||||| Sbjct: 50414 acaagtatttaggaacggagggagta 50389 Score = 40.1 bits (20), Expect = 9.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 160 tccccaacaacaagtatttaggaacagagggagtat 195 |||||||| |||| ||||| ||||||||||||||| Sbjct: 19724 tccccaacgacaactatttcagaacagagggagtat 19759
>gb|AC087181.9| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0018H01 map R1538, complete sequence Length = 142712 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 119 tactccctctgtaccataatat 140 |||||||||||||||||||||| Sbjct: 92697 tactccctctgtaccataatat 92676
>gb|AC136525.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0585E02, complete sequence Length = 138677 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 170 caagtatttaggaacagagggagtat 195 ||||||||||| |||||||||||||| Sbjct: 10840 caagtatttagaaacagagggagtat 10815
>gb|AC146382.4| Pan troglodytes BAC clone RP43-112E23 from 7, complete sequence Length = 181957 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Plus Query: 73 cctttctaccacggtatatgtacatt 98 |||||||||||||||| ||||||||| Sbjct: 72614 cctttctaccacggtaaatgtacatt 72639
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 119 tactccctctgtaccataatat 140 |||||||||||||||||||||| Sbjct: 28320345 tactccctctgtaccataatat 28320366 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 174 tatttaggaacagagggagtat 195 |||||||||||||||||||||| Sbjct: 3478462 tatttaggaacagagggagtat 3478483 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactactccctctgtaccataatat 140 ||||||||||||||| ||||||||| Sbjct: 29323805 tactactccctctgtcccataatat 29323829 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactactccctctgtaccataatat 140 ||||||||||||||| ||||||||| Sbjct: 5283424 tactactccctctgtcccataatat 5283448
>gb|AC146370.3| Pan troglodytes BAC clone RP43-58J3 from 7, complete sequence Length = 80817 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 73 cctttctaccacggtatatgtacatt 98 |||||||||||||||| ||||||||| Sbjct: 16553 cctttctaccacggtaaatgtacatt 16528
>gb|AC145476.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1023E01, complete sequence Length = 140322 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 170 caagtatttaggaacagagggagtat 195 ||||||||||| |||||||||||||| Sbjct: 37613 caagtatttagaaacagagggagtat 37588
>emb|Z97340.2|ATFCA5 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 5 Length = 209164 Score = 44.1 bits (22), Expect = 0.62 Identities = 28/30 (93%) Strand = Plus / Minus Query: 169 acaagtatttaggaacagagggagtatgat 198 |||| ||||||| ||||||||||||||||| Sbjct: 1943 acaaatatttagaaacagagggagtatgat 1914
>emb|Z97339.2|ATFCA4 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 4 Length = 205065 Score = 44.1 bits (22), Expect = 0.62 Identities = 28/30 (93%) Strand = Plus / Minus Query: 169 acaagtatttaggaacagagggagtatgat 198 |||| ||||||| ||||||||||||||||| Sbjct: 203947 acaaatatttagaaacagagggagtatgat 203918
>emb|AL161542.2|ATCHRIV42 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 42 Length = 195068 Score = 44.1 bits (22), Expect = 0.62 Identities = 28/30 (93%) Strand = Plus / Minus Query: 169 acaagtatttaggaacagagggagtatgat 198 |||| ||||||| ||||||||||||||||| Sbjct: 161001 acaaatatttagaaacagagggagtatgat 160972
>gb|AC119072.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0073N20 BAC genomic sequence, complete sequence Length = 147289 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 174 tatttaggaacagagggagtat 195 |||||||||||||||||||||| Sbjct: 75032 tatttaggaacagagggagtat 75053
>gb|AC104428.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1123F12, complete sequence Length = 103330 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 174 tatttaggaacagagggagtat 195 |||||||||||||||||||||| Sbjct: 31913 tatttaggaacagagggagtat 31892
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 174 tatttaggaacagagggagtat 195 |||||||||||||||||||||| Sbjct: 6469198 tatttaggaacagagggagtat 6469177 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 117 actactccctctgtaccataatat 140 |||||||||||||| ||||||||| Sbjct: 7081165 actactccctctgtcccataatat 7081142
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 170 caagtatttaggaacagagggagtat 195 ||||||||||| |||||||||||||| Sbjct: 13581705 caagtatttagaaacagagggagtat 13581680 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 115 gtactactccctctgtaccataata 139 |||||||||||||||| |||||||| Sbjct: 22772776 gtactactccctctgtcccataata 22772752 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 171 aagtatttaggaacagagggagtat 195 |||||||| |||||||||||||||| Sbjct: 18013629 aagtattttggaacagagggagtat 18013605 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 167 caacaagtatttaggaacagagggagta 194 |||||| |||||||| |||||||||||| Sbjct: 8153425 caacaaatatttagggacagagggagta 8153452
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 119 tactccctctgtaccataatat 140 |||||||||||||||||||||| Sbjct: 28411669 tactccctctgtaccataatat 28411690 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 174 tatttaggaacagagggagtat 195 |||||||||||||||||||||| Sbjct: 3478573 tatttaggaacagagggagtat 3478594 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactactccctctgtaccataatat 140 ||||||||||||||| ||||||||| Sbjct: 29415227 tactactccctctgtcccataatat 29415251 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactactccctctgtaccataatat 140 ||||||||||||||| ||||||||| Sbjct: 5282639 tactactccctctgtcccataatat 5282663
>dbj|AP000837.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0424A08 Length = 151294 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 115 gtactactccctctgtaccataatat 140 |||||||||||||||| ||||||||| Sbjct: 92601 gtactactccctctgtcccataatat 92576
>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence Length = 108608 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 174 tatttaggaacagagggagtat 195 |||||||||||||||||||||| Sbjct: 85377 tatttaggaacagagggagtat 85398
>gb|AC003952.2|AC003952 Arabidopsis thaliana chromosome II section 104 of 255 of the complete sequence. Sequence from clones T13L16 Length = 42009 Score = 44.1 bits (22), Expect = 0.62 Identities = 28/30 (93%) Strand = Plus / Plus Query: 169 acaagtatttaggaacagagggagtatgat 198 |||| ||||||| ||||||||||||||||| Sbjct: 19441 acaaatatttagaaacagagggagtatgat 19470
>emb|X03042.2|TAGLU1AG Triticum aestivum Ay gene for high-molecular-weight glutenin Length = 8117 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 169 acaagtatttaggaacagagggagta 194 |||||||||||||||| ||||||||| Sbjct: 1116 acaagtatttaggaacggagggagta 1091
>dbj|AP002987.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-428C14, complete sequence Length = 166893 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 212 taatagcataattcttattcacctaa 237 ||||| |||||||||||||||||||| Sbjct: 103440 taataacataattcttattcacctaa 103415
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 174 tatttaggaacagagggagtat 195 |||||||||||||||||||||| Sbjct: 6535665 tatttaggaacagagggagtat 6535644 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 117 actactccctctgtaccataatat 140 |||||||||||||| ||||||||| Sbjct: 7147136 actactccctctgtcccataatat 7147113
>emb|AM039901.1| Hordeum vulgare partial mRNA for putative cytosine-5 DNA methyltransferase (met1 gene) Length = 1461 Score = 44.1 bits (22), Expect = 0.62 Identities = 31/34 (91%) Strand = Plus / Minus Query: 161 ccccaacaacaagtatttaggaacagagggagta 194 |||||||||||| ||||| ||||| ||||||||| Sbjct: 1395 ccccaacaacaactattttggaacggagggagta 1362
>gb|AY821693.1| Australopyrum velutinum beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1595 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 174 tatttaggaacagagggagta 194 ||||||||||||||||||||| Sbjct: 1357 tatttaggaacagagggagta 1377
>gb|AY062213.1| Glycine max vacuolar processing enzyme 2 (VPE2) mRNA, complete cds Length = 1948 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 446 atgtttgcaaaggaccgcatgtgcttcat 474 |||||||||||||||| |||||| ||||| Sbjct: 1350 atgtttgcaaaggacctcatgtgtttcat 1322
>gb|AC107747.8| Mus musculus chromosome 15, clone RP23-303J2, complete sequence Length = 199506 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 ataagtgtataatttggtact 119 ||||||||||||||||||||| Sbjct: 142101 ataagtgtataatttggtact 142121
>gb|AC120987.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0007A06, complete sequence Length = 148029 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 171 aagtatttaggaacagagggagtat 195 |||||||| |||||||||||||||| Sbjct: 48956 aagtattttggaacagagggagtat 48932
>gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0028C22, complete sequence Length = 154228 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 112 ttggtactactccctctgtaccataatat 140 |||||| |||||||||||| ||||||||| Sbjct: 139164 ttggtagtactccctctgttccataatat 139136
>gb|AC121361.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009E21, complete sequence Length = 153214 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 115 gtactactccctctgtaccataata 139 |||||||||||||||| |||||||| Sbjct: 127975 gtactactccctctgtcccataata 127951
>gb|AC108503.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1387_F08, complete sequence Length = 141535 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 115 gtactactccctctgtaccataata 139 |||||||||||||||| |||||||| Sbjct: 82226 gtactactccctctgtcccataata 82202
>gb|AY585885.1| Triticum aestivum clone HT5 genomic sequence Length = 482 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 174 tatttaggaacagagggagta 194 ||||||||||||||||||||| Sbjct: 376 tatttaggaacagagggagta 396
>gb|AC145380.3| Oryza sativa chromosome 3 BAC OSJNBa0013A09 genomic sequence, complete sequence Length = 139788 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 116 tactactccctctgtaccataatat 140 ||||||||||||||| ||||||||| Sbjct: 32195 tactactccctctgtcccataatat 32171
>emb|CR626934.1| Triticum aestivum Length = 94398 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 174 tatttaggaacagagggagta 194 ||||||||||||||||||||| Sbjct: 49932 tatttaggaacagagggagta 49912
>gb|AC146581.1| Oryza sativa (japonica cultivar-group) Nipponbare strain chromosome 3 clone OSJNBa0021H20, complete sequence Length = 133079 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactactccctctgtaccataatat 140 ||||||||||||||| ||||||||| Sbjct: 106826 tactactccctctgtcccataatat 106850
>emb|AL606615.4|OSJN00048 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086B14, complete sequence Length = 175698 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 116 tactactccctctgtaccataatat 140 ||||||||||||||||||| ||||| Sbjct: 174816 tactactccctctgtaccaaaatat 174792
>emb|AL662937.4|OSJN00140 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027G07, complete sequence Length = 179021 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 116 tactactccctctgtaccataatat 140 ||||||||||||||||||| ||||| Sbjct: 13161 tactactccctctgtaccaaaatat 13137
>gb|AC092389.4| Oryza sativa chromosome 10 BAC OSJNBa0053C23 genomic sequence, complete sequence Length = 194361 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 174 tatttaggaacagagggagta 194 ||||||||||||||||||||| Sbjct: 158874 tatttaggaacagagggagta 158854
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 116 tactactccctctgtaccataatat 140 ||||||||||||||||||| ||||| Sbjct: 22571061 tactactccctctgtaccaaaatat 22571037 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 actactccctctgtaccataatat 140 |||||||||||||| ||||||||| Sbjct: 29211823 actactccctctgtcccataatat 29211846 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 174 tatttaggaacagagggagtatga 197 ||||| |||||||||||||||||| Sbjct: 14829984 tattttggaacagagggagtatga 14830007
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 170 caagtatttaggaacagagggagtatgat 198 ||||||||||| ||| ||||||||||||| Sbjct: 27152726 caagtatttagaaacggagggagtatgat 27152698 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 gtatttaggaacagagggagtatg 196 |||||||||||| ||||||||||| Sbjct: 3816533 gtatttaggaacggagggagtatg 3816556
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 174 tatttaggaacagagggagta 194 ||||||||||||||||||||| Sbjct: 20281139 tatttaggaacagagggagta 20281119 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 actactccctctgtaccataatat 140 |||||||||||||| ||||||||| Sbjct: 1518033 actactccctctgtcccataatat 1518056
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 108 taatttggtactactccctctgtaccataatat 140 ||||| ||||||||||||||| | ||||||||| Sbjct: 14287040 taattaggtactactccctctattccataatat 14287008 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 108 taatttggtactactccctctgtaccataatat 140 ||||| ||||||||||||||| | ||||||||| Sbjct: 14219488 taattaggtactactccctctattccataatat 14219456 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 108 taatttggtactactccctctgtaccataatat 140 ||||| ||||||||||||||| | ||||||||| Sbjct: 14097033 taattaggtactactccctctattccataatat 14097001 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactactccctctgtaccataatat 140 ||||||||||||||| ||||||||| Sbjct: 577906 tactactccctctgtcccataatat 577930
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactactccctctgtaccataatat 140 ||||||||||||||| ||||||||| Sbjct: 4056422 tactactccctctgtcccataatat 4056446
>gb|AC008510.9| Homo sapiens chromosome 19 clone CTC-452L11, complete sequence Length = 104999 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 612 gaaggtttccaatcagctcaa 632 ||||||||||||||||||||| Sbjct: 69848 gaaggtttccaatcagctcaa 69828
>gb|AF209980.1|AF209980 Batrachospermum cayennense ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit gene, partial cds; chloroplast gene for chloroplast product Length = 1281 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 447 tgtttgcaaaggaccgcatgt 467 ||||||||||||||||||||| Sbjct: 1219 tgtttgcaaaggaccgcatgt 1199
>gb|AC104429.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006P09, complete sequence Length = 153950 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactactccctctgtaccataatat 140 ||||||||||||||| ||||||||| Sbjct: 4593 tactactccctctgtcccataatat 4617
>dbj|AP003451.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0413C03 Length = 162161 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 174 tatttaggaacagagggagta 194 ||||||||||||||||||||| Sbjct: 118189 tatttaggaacagagggagta 118169
>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02 Length = 153116 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 170 caagtatttaggaacagagggagta 194 |||||||||||||||| |||||||| Sbjct: 64694 caagtatttaggaacaaagggagta 64718
>gb|DQ351213.1| Hordeum vulgare subsp. vulgare resistance protein (ABC1037) gene, complete cds Length = 25080 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 174 tatttaggaacagagggagta 194 ||||||||||||||||||||| Sbjct: 21877 tatttaggaacagagggagta 21857
>gb|AF385650.1| Epymenia wilsonis ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast gene for chloroplast product Length = 1160 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 447 tgtttgcaaaggaccgcatgt 467 ||||||||||||||||||||| Sbjct: 1073 tgtttgcaaaggaccgcatgt 1053
>gb|AF385646.1| Epymenia capensis ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast gene for chloroplast product Length = 1433 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 447 tgtttgcaaaggaccgcatgt 467 ||||||||||||||||||||| Sbjct: 1346 tgtttgcaaaggaccgcatgt 1326
>dbj|AP003746.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1123_C12 Length = 114309 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactactccctctgtaccataatat 140 ||||||||||||||| ||||||||| Sbjct: 12408 tactactccctctgtcccataatat 12432
>dbj|AP003204.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1111C09 Length = 156393 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactactccctctgtaccataatat 140 ||||||||||||||| ||||||||| Sbjct: 98548 tactactccctctgtcccataatat 98572
>dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0034B12 Length = 124083 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 112 ttggtactactccctctgtaccataatat 140 |||||| |||||||||||| ||||||||| Sbjct: 36337 ttggtagtactccctctgttccataatat 36309
>dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0450E05 Length = 176553 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 112 ttggtactactccctctgtaccataatat 140 |||||| |||||||||||| ||||||||| Sbjct: 157583 ttggtagtactccctctgttccataatat 157555
>dbj|AP003737.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1051_D12 Length = 144262 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 108 taatttggtactactccctctgtaccataatat 140 ||||| ||||||||||||||| | ||||||||| Sbjct: 37351 taattaggtactactccctctattccataatat 37319
>dbj|AP006052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0067K15 Length = 160162 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 108 taatttggtactactccctctgtaccataatat 140 ||||| ||||||||||||||| | ||||||||| Sbjct: 104369 taattaggtactactccctctattccataatat 104337
>dbj|AP003830.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1423_A11 Length = 98377 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 108 taatttggtactactccctctgtaccataatat 140 ||||| ||||||||||||||| | ||||||||| Sbjct: 72992 taattaggtactactccctctattccataatat 72960
>dbj|AP005772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0073A21 Length = 170051 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactactccctctgtaccataatat 140 ||||||||||||||| ||||||||| Sbjct: 103088 tactactccctctgtcccataatat 103112
>dbj|AP004190.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1506_F01 Length = 121202 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactactccctctgtaccataatat 140 ||||||||||||||| ||||||||| Sbjct: 105065 tactactccctctgtcccataatat 105089
>dbj|AP003883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1134_H03 Length = 135914 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 tactactccctctgtaccataatat 140 ||||||||||||||| ||||||||| Sbjct: 2334 tactactccctctgtcccataatat 2358
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 174 tatttaggaacagagggagta 194 ||||||||||||||||||||| Sbjct: 20292415 tatttaggaacagagggagta 20292395 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 actactccctctgtaccataatat 140 |||||||||||||| ||||||||| Sbjct: 1518030 actactccctctgtcccataatat 1518053
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 170 caagtatttaggaacagagggagtatgat 198 ||||||||||| ||| ||||||||||||| Sbjct: 27078326 caagtatttagaaacggagggagtatgat 27078298 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 gtatttaggaacagagggagtatg 196 |||||||||||| ||||||||||| Sbjct: 3816507 gtatttaggaacggagggagtatg 3816530
>emb|AL713905.6|CNS07YQ5 Oryza sativa chromosome 12, . BAC OJ1584_D02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131300 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 170 caagtatttaggaacagagggagtatgat 198 ||||||||||| ||| ||||||||||||| Sbjct: 3511 caagtatttagaaacggagggagtatgat 3539
>emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC OJ1559_C07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145816 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 170 caagtatttaggaacagagggagtatgat 198 ||||||||||| ||| ||||||||||||| Sbjct: 91625 caagtatttagaaacggagggagtatgat 91597
>gb|U04039.1|AFU04039 Amphiroa fragilissima Key Largo, Dade Co., USA chloroplast ribulose-1,5-bisphosphate carboxylase oxygenase large subunit (rbcL) gene, partial cds Length = 1326 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 447 tgtttgcaaaggaccgcatgt 467 ||||||||||||||||||||| Sbjct: 1239 tgtttgcaaaggaccgcatgt 1219
>dbj|AP006696.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT17N21, TM0403, complete sequence Length = 97807 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 174 tatttaggaacagagggagta 194 ||||||||||||||||||||| Sbjct: 65061 tatttaggaacagagggagta 65081
>dbj|AP006657.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT05H03, TM0342b, complete sequence Length = 58173 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 174 tatttaggaacagagggagta 194 ||||||||||||||||||||| Sbjct: 19533 tatttaggaacagagggagta 19553
>dbj|AP004951.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT26I01, TM0124, complete sequence Length = 79571 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 174 tatttaggaacagagggagta 194 ||||||||||||||||||||| Sbjct: 22758 tatttaggaacagagggagta 22778
>dbj|AB058924.1| Hordeum vulgare gene for protein kinase HvPKABA1, complete cds, cultivar:Igri Length = 11684 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 174 tatttaggaacagagggagtatgat 198 ||||||||||| ||||||||||||| Sbjct: 7544 tatttaggaacggagggagtatgat 7568
>gb|AC159318.4| Mus musculus BAC clone RP23-76M13 from chromosome 12, complete sequence Length = 269200 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 550 aagaggctcaccagctgggc 569 |||||||||||||||||||| Sbjct: 121924 aagaggctcaccagctgggc 121943
>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0097K08 map C827S, complete sequence Length = 137870 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 actactccctctgtaccataatat 140 |||||||||||||| ||||||||| Sbjct: 101390 actactccctctgtcccataatat 101413
>gb|AC079128.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0056A20, complete sequence Length = 151163 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 actactccctctgtaccataatat 140 |||||||||||||| ||||||||| Sbjct: 36606 actactccctctgtcccataatat 36629
>gb|AC136223.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0093E24, complete sequence Length = 146492 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 167 caacaagtatttaggaacagagggagta 194 |||||| |||||||| |||||||||||| Sbjct: 75658 caacaaatatttagggacagagggagta 75685
>gb|AY359584.1| Zea mays B73 ethylene insensitive 2 (Ein2-25) gene, complete cds Length = 8237 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gtactactccctctgtacca 134 |||||||||||||||||||| Sbjct: 2545 gtactactccctctgtacca 2526
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 actactccctctgtaccataatat 140 |||||||||||||| ||||||||| Sbjct: 1518033 actactccctctgtcccataatat 1518056
>emb|AL606624.4|OSJN00058 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011J08, complete sequence Length = 157734 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 actactccctctgtaccataatat 140 |||||||||||||| ||||||||| Sbjct: 121282 actactccctctgtcccataatat 121305
>emb|AL606688.3|OSJN00086 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064M23, complete sequence Length = 149892 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 actactccctctgtaccataatat 140 |||||||||||||| ||||||||| Sbjct: 14869 actactccctctgtcccataatat 14892
>gb|AC131967.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0049K09, complete sequence Length = 154181 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 actactccctctgtaccataatat 140 |||||||||||||| ||||||||| Sbjct: 130787 actactccctctgtcccataatat 130810
>dbj|AK125005.2| Homo sapiens cDNA FLJ43015 fis, clone BRTHA2016496, moderately similar to Vacuolar processing enzyme precursor (EC 3.4.22.-) Length = 1779 Score = 40.1 bits (20), Expect = 9.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 448 gtttgcaaaggaccgcatgtgcttcattccatactg 483 |||||||||||||| ||| || ||||| |||||||| Sbjct: 1401 gtttgcaaaggacctcatatgtttcatcccatactg 1366
>gb|AC006403.4| Arabidopsis thaliana chromosome 2 clone T28I24 map mi238, complete sequence Length = 79555 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tttaggaacagagggagtat 195 |||||||||||||||||||| Sbjct: 32937 tttaggaacagagggagtat 32918
>gb|AY972629.1| Hordeum vulgare subsp. vulgare cultivar Morex subclone NRG095 cyclic nucleotide-gated ion channel 1 (CNGC1) gene, partial cds Length = 5200 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tatttaggaacagagggagt 193 |||||||||||||||||||| Sbjct: 2787 tatttaggaacagagggagt 2768
>gb|AY749281.1| Oryza meridionalis voucher 105306 OsRFCD001283 gene, intron 2 Length = 1235 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 117 actactccctctgtaccataatat 140 |||||||||||||| ||||||||| Sbjct: 1199 actactccctctgtcccataatat 1176
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 actactccctctgtaccataatat 140 |||||||||||||| ||||||||| Sbjct: 24678373 actactccctctgtcccataatat 24678396 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 actactccctctgtaccataatat 140 |||||||||||||| ||||||||| Sbjct: 7299429 actactccctctgtcccataatat 7299452 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 tactccctctgtaccataatattt 142 |||||||||||| ||||||||||| Sbjct: 4995336 tactccctctgtcccataatattt 4995359
>emb|AL663021.4|OSJN00218 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041M06, complete sequence Length = 107014 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 174 tatttaggaacagagggagtatga 197 ||||| |||||||||||||||||| Sbjct: 83922 tattttggaacagagggagtatga 83945
>dbj|AB182944.1| Triticum aestivum Wknox1b gene for KN1 homeobox protein, complete cds Length = 10847 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 169 acaagtatttaggaacagagggagtatg 196 |||| |||||||||||||||| |||||| Sbjct: 7729 acaaatatttaggaacagaggaagtatg 7702
>dbj|AP004368.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1139B11 Length = 136548 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 actactccctctgtaccataatat 140 |||||||||||||| ||||||||| Sbjct: 65082 actactccctctgttccataatat 65105
>gb|AF536819.1| Triticum aestivum ADP glucose pyrophosphorylase gene, partial cds, alternatively spliced Length = 2512 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 174 tatttaggaacagagggagtatgatgga 201 ||||||||||| ||||||||| |||||| Sbjct: 403 tatttaggaacggagggagtaagatgga 376
>dbj|AP006233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1249E06 Length = 126534 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 ctactccctctgtaccataa 137 |||||||||||||||||||| Sbjct: 108785 ctactccctctgtaccataa 108804
>dbj|AP006058.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0066B16 Length = 190143 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 attacacatgtttgcaaagg 458 |||||||||||||||||||| Sbjct: 130457 attacacatgtttgcaaagg 130476
>dbj|AP004862.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0001B11 Length = 166004 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 actactccctctgtaccataatat 140 |||||||||||||| ||||||||| Sbjct: 6014 actactccctctgtcccataatat 6037
>dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0052G07 Length = 156207 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 actactccctctgtaccataatat 140 |||||||||||||| ||||||||| Sbjct: 134433 actactccctctgtcccataatat 134456
>dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1172G12 Length = 171974 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 tactccctctgtaccataatattt 142 |||||||||||| ||||||||||| Sbjct: 37450 tactccctctgtcccataatattt 37473
>dbj|AP004680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0029G06 Length = 169711 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 actactccctctgtaccataatat 140 |||||||||||||| ||||||||| Sbjct: 12054 actactccctctgtcccataatat 12077
>dbj|AP003539.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0040H10 Length = 173301 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 actactccctctgtaccataatat 140 |||||||||||||| ||||||||| Sbjct: 161566 actactccctctgtcccataatat 161589
>dbj|AP005724.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0017I18 Length = 146304 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 gtatttaggaacagagggagtatg 196 |||||||||||| ||||||||||| Sbjct: 47220 gtatttaggaacggagggagtatg 47243
>dbj|AP005701.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0095I04 Length = 138924 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 gtatttaggaacagagggagtatg 196 |||||||||||| ||||||||||| Sbjct: 74460 gtatttaggaacggagggagtatg 74483
>dbj|AB020752.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MTH16 Length = 68098 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 tttaggaacagagggagtat 195 |||||||||||||||||||| Sbjct: 52768 tttaggaacagagggagtat 52787
>dbj|AP005523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0488B06 Length = 154764 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 tactactccctctgtaccataata 139 ||||||||||||||| |||||||| Sbjct: 4523 tactactccctctgtcccataata 4546
>dbj|AP005520.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0426E02 Length = 166985 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 tactactccctctgtaccataata 139 ||||||||||||||| |||||||| Sbjct: 99719 tactactccctctgtcccataata 99742
>ref|XM_317924.2| Anopheles gambiae str. PEST ENSANGP00000011363 (ENSANGG00000008874), partial mRNA Length = 26059 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 tgcttcttcacctctggttt 338 |||||||||||||||||||| Sbjct: 21551 tgcttcttcacctctggttt 21532
>dbj|AB097116.1| Brassica rapa SRK-60, SLG-60 genes for S receptor kinase, S-locus glycoprotein, partial cds Length = 86379 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tttaggaacagagggagtat 195 |||||||||||||||||||| Sbjct: 81203 tttaggaacagagggagtat 81184
>emb|BX005250.7| Zebrafish DNA sequence from clone DKEY-35H6 in linkage group 14, complete sequence Length = 281427 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 cctttctaccacggtatatg 92 |||||||||||||||||||| Sbjct: 13404 cctttctaccacggtatatg 13385
>emb|AL773593.10| Zebrafish DNA sequence from clone CH211-202N20 in linkage group 5, complete sequence Length = 202726 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 aacaagtatttaggaacaga 187 |||||||||||||||||||| Sbjct: 197958 aacaagtatttaggaacaga 197977
>emb|AL732638.6|CNS08C9D Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0010K22 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 92728 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 173 gtatttaggaacagagggagtatg 196 |||||||||||| ||||||||||| Sbjct: 23512 gtatttaggaacggagggagtatg 23489
>emb|AL353994.1|ATF17I14 Arabidopsis thaliana DNA chromosome 5, BAC clone F17I14 (ESSA project) Length = 92491 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tttaggaacagagggagtat 195 |||||||||||||||||||| Sbjct: 16816 tttaggaacagagggagtat 16797
>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome Length = 4096345 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 cggtatatgtacattataagtgta 107 |||||||||||||||||| ||||| Sbjct: 1609644 cggtatatgtacattatatgtgta 1609621
>emb|AL929556.14| Mouse DNA sequence from clone RP23-353B17 on chromosome 2, complete sequence Length = 192715 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 tgtacattataagtgtataa 110 |||||||||||||||||||| Sbjct: 48779 tgtacattataagtgtataa 48798
>dbj|AP006143.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT16L07, TM0254, complete sequence Length = 118592 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 atttaggaacagagggagta 194 |||||||||||||||||||| Sbjct: 20342 atttaggaacagagggagta 20361
>dbj|AP004473.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10J15, TM0007, complete sequence Length = 92741 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 aggaacagagggagtatgat 198 |||||||||||||||||||| Sbjct: 49423 aggaacagagggagtatgat 49442
>dbj|D89971.1| Vigna mungo mRNA for asparaginyl endopeptidase (VmPE-1), complete cds Length = 1724 Score = 40.1 bits (20), Expect = 9.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 448 gtttgcaaaggaccgcatgtgcttcattccatactg 483 |||||||||||||| ||| || ||||| |||||||| Sbjct: 1389 gtttgcaaaggacctcatatgtttcatcccatactg 1354 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,355,064 Number of Sequences: 3902068 Number of extensions: 5355064 Number of successful extensions: 94224 Number of sequences better than 10.0: 146 Number of HSP's better than 10.0 without gapping: 169 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 91891 Number of HSP's gapped (non-prelim): 2331 length of query: 711 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 688 effective length of database: 17,143,297,704 effective search space: 11794588820352 effective search space used: 11794588820352 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
