ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd23j22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|BX936416.11| Zebrafish DNA sequence from clone CH211-194I16 ... 44 0.12
2emb|AL663099.7| Mouse DNA sequence from clone DN-384L23 on chrom... 42 0.47
3emb|AL606750.13| Mouse DNA sequence from clone RP23-335A19 on ch... 42 0.47
4gb|AC149224.7| Mus musculus BAC clone RP23-81D11 from chromosome... 40 1.9
5gb|AC140411.3| Mus musculus BAC clone RP24-93J6 from chromosome ... 40 1.9
6gb|AC134453.4| Mus musculus BAC clone RP24-263P23 from chromosom... 40 1.9
7emb|AL669951.18| Mouse DNA sequence from clone RP23-94F11 on chr... 40 1.9
8gb|DQ396892.1| Eulemur rubriventer clone 44HDZ119 microsatellite... 40 1.9
9gb|AC142417.2| Homo sapiens fosmid clone XXFOS-87237G7 from 2, c... 40 1.9
10emb|CT485668.1| Leptosphaeria maculans : genomic region surround... 40 1.9
11gb|AC158363.2| Mus musculus BAC clone RP23-214J3 from chromosome... 40 1.9
12gb|AC154808.2| Mus musculus BAC clone RP24-512K19 from chromosom... 38 7.3
13gb|AC159201.2| Mus musculus BAC clone RP23-340E6 from chromosome... 38 7.3
14gb|AF401203.1| Homo sapiens chAB4 multisequence family and NF1-r... 38 7.3
15gb|AC008097.5| Drosophila melanogaster clone BACR20D06, complete... 38 7.3
16gb|AC147893.2| Xenopus tropicalis clone CH216-36J13, complete se... 38 7.3
17gb|AE006691.1| Sulfolobus solfataricus P2 section 50 of 272 of t... 38 7.3
18gb|AC183918.1| Homo sapiens BAC clone RP11-170N9 from chromosome... 38 7.3
19gb|AY078063.2| Zea mays B transcriptional activator (b1) gene, b... 38 7.3
20gb|AC134878.3| Homo sapiens BAC clone RP11-131M6 from Y, complet... 38 7.3
21gb|AC122036.3| Mus musculus BAC clone RP24-420C18 from chromosom... 38 7.3
22gb|AC131804.4| Mus musculus BAC clone RP24-553C6 from chromosome... 38 7.3
23gb|AC141566.4| Mus musculus BAC clone RP23-89G14 from chromosome... 38 7.3
24gb|AC133123.3| Homo sapiens 3 BAC RP11-441E2 (Roswell Park Cance... 38 7.3
25gb|AC122836.4| Mus musculus BAC clone RP23-188B13 from 7, comple... 38 7.3
26emb|AL354942.10| Human DNA sequence from clone RP11-57O22 on chr... 38 7.3
27emb|Y18930.1|SSU18930 Sulfolobus solfataricus 281 kb genomic DNA... 38 7.3
28gb|AC138773.5| Homo sapiens BAC clone RP11-1320L20 from UL, comp... 38 7.3
29gb|AC141020.2| Rattus norvegicus BAC CH230-497A18 (Children's H... 38 7.3
30gb|AC138638.11| Mus musculus chromosome 8, clone RP23-380M21, co... 38 7.3
31gb|AC104810.5| Homo sapiens BAC clone RP11-641D2 from 4, complet... 38 7.3
32gb|AC021915.11| Homo sapiens chromosome 8, clone RP11-26M5, comp... 38 7.3
33dbj|AK133846.1| Mus musculus 8 days embryo whole body cDNA, RIKE... 38 7.3
34gb|AC010411.7| Homo sapiens chromosome 5 clone CTD-2165P17, comp... 38 7.3
35gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A17 gen... 38 7.3
36gb|AC136636.6| Mus musculus BAC clone RP24-183E22 from chromosom... 38 7.3
37gb|AC008856.6|AC008856 Homo sapiens chromosome 5 clone CTD-2178N... 38 7.3
38dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.3
39gb|AC107079.6| Homo sapiens BAC clone RP11-585E12 from 2, comple... 38 7.3
40gb|AC147060.2| Homo sapiens BAC clone RP11-268B15 from 4, comple... 38 7.3
41gb|AC145621.2| Homo sapiens BAC clone RP11-365B19 from 4, comple... 38 7.3
42gb|AC118282.4| Homo sapiens BAC clone RP11-1281K21 from 4, compl... 38 7.3
43gb|AC119751.3| Homo sapiens BAC clone RP11-241F15 from 4, comple... 38 7.3
44emb|AL591856.26| Human DNA sequence from clone RP11-426M5 on chr... 38 7.3
45emb|BX640538.4| Human DNA sequence from clone RP6-238B6 on chrom... 38 7.3
46emb|AL354822.8| Human DNA sequence from clone RP11-474C22 on chr... 38 7.3
47emb|BX546492.4| Human DNA sequence from clone RP11-441E2 on chro... 38 7.3
48emb|AL583842.40| Human DNA sequence from clone RP11-417J8 on chr... 38 7.3
49gb|AE003793.3| Drosophila melanogaster chromosome 2R, section 57... 38 7.3
50gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 38 7.3
51emb|AL355793.6| Human DNA sequence from clone RP4-694M10 on chro... 38 7.3
52emb|AL805928.9| Mouse DNA sequence from clone RP23-136C12 on chr... 38 7.3
53gb|AC102210.6| Mus musculus chromosome 8, clone RP24-351F4, comp... 38 7.3
54emb|AL355973.21| Human DNA sequence from clone RP4-660N4 on chro... 38 7.3
55emb|AL591805.14| Mouse DNA sequence from clone RP23-90N15 on chr... 38 7.3 
>emb|BX936416.11| Zebrafish DNA sequence from clone CH211-194I16 in linkage group 18,
              complete sequence
          Length = 214763

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 4      cacacaaagtacacacatacac 25
              ||||||||||||||||||||||
Sbjct: 145187 cacacaaagtacacacatacac 145166
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>emb|AL663099.7| Mouse DNA sequence from clone DN-384L23 on chromosome 3 Contains a
             glyceraldehyde-3-phosphate dehydrogenase (GAPD)
             pseudogene, two novel genes (4930406D18RIK)
             (4930431B09Rik), the 5' end of a novel gene
             (E130019M14RIK) and a CpG island, complete sequence
          Length = 177135

 Score = 42.1 bits (21), Expect = 0.47
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 10    aagtacacacatacacccatcactc 34
             ||||||||||||||||||| |||||
Sbjct: 78133 aagtacacacatacacccaacactc 78157
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>emb|AL606750.13| Mouse DNA sequence from clone RP23-335A19 on chromosome 3, complete
              sequence
          Length = 207366

 Score = 42.1 bits (21), Expect = 0.47
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 10     aagtacacacatacacccatcactc 34
              ||||||||||||||||||| |||||
Sbjct: 135759 aagtacacacatacacccaacactc 135783
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>gb|AC149224.7| Mus musculus BAC clone RP23-81D11 from chromosome 19, complete sequence
          Length = 217821

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      gcacacaaagtacacacata 22
              ||||||||||||||||||||
Sbjct: 114417 gcacacaaagtacacacata 114398
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>gb|AC140411.3| Mus musculus BAC clone RP24-93J6 from chromosome 19, complete sequence
          Length = 163978

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     cacaaagtacacacatacac 25
             ||||||||||||||||||||
Sbjct: 33495 cacaaagtacacacatacac 33514
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>gb|AC134453.4| Mus musculus BAC clone RP24-263P23 from chromosome 15, complete
             sequence
          Length = 131905

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 2     cgcacacaaagtacacacatacac 25
             ||||||||||| ||||||||||||
Sbjct: 77570 cgcacacaaaggacacacatacac 77593
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>emb|AL669951.18| Mouse DNA sequence from clone RP23-94F11 on chromosome 11 Contains three
              novel genes, a ribosomal protein L9 (Rpl9) pseudogene, a
              transcription elongation factor A (SII) 3 (Tcea3)
              pseudogene and the 3' end of the Fbxw1b gene for F-box and
              WD-40 domain protein 1B, complete sequence
          Length = 251085

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 4      cacacaaagtacacacatac 23
              ||||||||||||||||||||
Sbjct: 118428 cacacaaagtacacacatac 118447
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>gb|DQ396892.1| Eulemur rubriventer clone 44HDZ119 microsatellite sequence
          Length = 158

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 10 aagtacacacatacacccat 29
          ||||||||||||||||||||
Sbjct: 61 aagtacacacatacacccat 80
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>gb|AC142417.2| Homo sapiens fosmid clone XXFOS-87237G7 from 2, complete sequence
          Length = 19840

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 5     acacaaagtacacacatacacccatcac 32
             ||||| ||||||||||||||| ||||||
Sbjct: 19605 acacacagtacacacatacacacatcac 19578
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>emb|CT485668.1| Leptosphaeria maculans : genomic region surrounding the avirulence gene
             AvrLm1 (AM084345)
          Length = 100390

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    acacacatacacccatcact 33
             ||||||||||||||||||||
Sbjct: 51554 acacacatacacccatcact 51535
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>gb|AC158363.2| Mus musculus BAC clone RP23-214J3 from chromosome 15, complete
            sequence
          Length = 228138

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 2    cgcacacaaagtacacacatacac 25
            ||||||||||| ||||||||||||
Sbjct: 9112 cgcacacaaaggacacacatacac 9135
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>gb|AC154808.2| Mus musculus BAC clone RP24-512K19 from chromosome 13, complete sequence
          Length = 187080

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 3      gcacacaaagtacacacatacac 25
              |||||||||||||||||| ||||
Sbjct: 140083 gcacacaaagtacacacacacac 140061
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>gb|AC159201.2| Mus musculus BAC clone RP23-340E6 from chromosome 13, complete
            sequence
          Length = 187967

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 3    gcacacaaagtacacacatacac 25
            |||||||||||||||||| ||||
Sbjct: 9285 gcacacaaagtacacacacacac 9263
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>gb|AF401203.1| Homo sapiens chAB4 multisequence family and NF1-related multisequence
             family regions
          Length = 86723

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 3     gcacacaaagtacacacatacac 25
             |||||||||||||||||| ||||
Sbjct: 59479 gcacacaaagtacacacacacac 59457
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>gb|AC008097.5| Drosophila melanogaster clone BACR20D06, complete sequence
          Length = 185670

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 2      cgcacacaaagtacacaca 20
              |||||||||||||||||||
Sbjct: 104301 cgcacacaaagtacacaca 104283
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>gb|AC147893.2| Xenopus tropicalis clone CH216-36J13, complete sequence
          Length = 159658

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 73    aaagaaagttacaagcact 91
             |||||||||||||||||||
Sbjct: 73987 aaagaaagttacaagcact 74005
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>gb|AE006691.1| Sulfolobus solfataricus P2 section 50 of 272 of the complete genome
          Length = 12519

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 105  tactaagcttaggagaaac 123
            |||||||||||||||||||
Sbjct: 1331 tactaagcttaggagaaac 1349
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>gb|AC183918.1| Homo sapiens BAC clone RP11-170N9 from chromosome unknown, complete
             sequence
          Length = 151064

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 3     gcacacaaagtacacacatacac 25
             |||||||||||||||||| ||||
Sbjct: 63502 gcacacaaagtacacacacacac 63480
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>gb|AY078063.2| Zea mays B transcriptional activator (b1) gene, b1-B' allele, exons 1
             through 3 and partial cds
          Length = 107840

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 16    acacatacacccatcactc 34
             |||||||||||||||||||
Sbjct: 41859 acacatacacccatcactc 41841
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>gb|AC134878.3| Homo sapiens BAC clone RP11-131M6 from Y, complete sequence
          Length = 155813

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 3     gcacacaaagtacacacatacac 25
             |||||||||||||||||| ||||
Sbjct: 79109 gcacacaaagtacacacacacac 79087
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>gb|AC122036.3| Mus musculus BAC clone RP24-420C18 from chromosome 8, complete sequence
          Length = 209062

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 4     cacacaaagtacacacatacacc 26
             |||||||||||| ||||||||||
Sbjct: 54662 cacacaaagtactcacatacacc 54684
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>gb|AC131804.4| Mus musculus BAC clone RP24-553C6 from chromosome 1, complete sequence
          Length = 138699

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 4      cacacaaagtacacacata 22
              |||||||||||||||||||
Sbjct: 119328 cacacaaagtacacacata 119310
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>gb|AC141566.4| Mus musculus BAC clone RP23-89G14 from chromosome 7, complete sequence
          Length = 236600

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 14    acacacatacacccatcac 32
             |||||||||||||||||||
Sbjct: 29818 acacacatacacccatcac 29800
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>gb|AC133123.3| Homo sapiens 3 BAC RP11-441E2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 114080

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 3     gcacacaaagtacacacatacac 25
             |||||||||||||||||| ||||
Sbjct: 99138 gcacacaaagtacacacacacac 99116
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>gb|AC122836.4| Mus musculus BAC clone RP23-188B13 from 7, complete sequence
          Length = 222390

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 14    acacacatacacccatcac 32
             |||||||||||||||||||
Sbjct: 33859 acacacatacacccatcac 33877
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>emb|AL354942.10| Human DNA sequence from clone RP11-57O22 on chromosome 6 Contains part
             of the gene for a novel protein (FLJ32724) and a CpG
             island, complete sequence
          Length = 198217

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 65    aggtaacaaaagaaagtta 83
             |||||||||||||||||||
Sbjct: 78340 aggtaacaaaagaaagtta 78322
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>emb|Y18930.1|SSU18930 Sulfolobus solfataricus 281 kb genomic DNA fragment, strain P2
          Length = 281244

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 105    tactaagcttaggagaaac 123
              |||||||||||||||||||
Sbjct: 185265 tactaagcttaggagaaac 185247
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>gb|AC138773.5| Homo sapiens BAC clone RP11-1320L20 from UL, complete sequence
          Length = 191144

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 3     gcacacaaagtacacacatacac 25
             |||||||||||||||||| ||||
Sbjct: 68535 gcacacaaagtacacacacacac 68513
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>gb|AC141020.2| Rattus norvegicus  BAC CH230-497A18 (Children's Hospital Oakland Research
              Institute Rat (BN/SsNHsd/MCW) BAC library) complete
              sequence
          Length = 168022

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 14     acacacatacacccatcac 32
              |||||||||||||||||||
Sbjct: 143054 acacacatacacccatcac 143072
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>gb|AC138638.11| Mus musculus chromosome 8, clone RP23-380M21, complete sequence
          Length = 168821

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 67    gtaacaaaagaaagttaca 85
             |||||||||||||||||||
Sbjct: 53786 gtaacaaaagaaagttaca 53768
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>gb|AC104810.5| Homo sapiens BAC clone RP11-641D2 from 4, complete sequence
          Length = 165432

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 7     acaaagtacacacatacac 25
             |||||||||||||||||||
Sbjct: 75755 acaaagtacacacatacac 75737
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>gb|AC021915.11| Homo sapiens chromosome 8, clone RP11-26M5, complete sequence
          Length = 183101

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 11    agtacacacatacacccat 29
             |||||||||||||||||||
Sbjct: 80005 agtacacacatacacccat 80023
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>dbj|AK133846.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:5730447C22 product:homeo box,
            msh-like 2, full insert sequence
          Length = 2162

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 3    gcacacaaagtacacacatacac 25
            |||||||||||||||||| ||||
Sbjct: 1927 gcacacaaagtacacacacacac 1905
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>gb|AC010411.7| Homo sapiens chromosome 5 clone CTD-2165P17, complete sequence
          Length = 177807

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 3      gcacacaaagtacacacatacac 25
              ||||||||| |||||||||||||
Sbjct: 109320 gcacacaaaatacacacatacac 109342
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>gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A17 genomic sequence, complete
             sequence
          Length = 132927

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 7     acaaagtacacacatacac 25
             |||||||||||||||||||
Sbjct: 92923 acaaagtacacacatacac 92941
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>gb|AC136636.6| Mus musculus BAC clone RP24-183E22 from chromosome 1, complete sequence
          Length = 182542

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 4      cacacaaagtacacacata 22
              |||||||||||||||||||
Sbjct: 179137 cacacaaagtacacacata 179155
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>gb|AC008856.6|AC008856 Homo sapiens chromosome 5 clone CTD-2178N20, complete sequence
          Length = 154229

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 3      gcacacaaagtacacacatacac 25
              ||||||||| |||||||||||||
Sbjct: 126870 gcacacaaaatacacacatacac 126892
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 7        acaaagtacacacatacac 25
                |||||||||||||||||||
Sbjct: 21661019 acaaagtacacacatacac 21661037
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>gb|AC107079.6| Homo sapiens BAC clone RP11-585E12 from 2, complete sequence
          Length = 133304

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 16    acacatacacccatcactc 34
             |||||||||||||||||||
Sbjct: 19823 acacatacacccatcactc 19805
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>gb|AC147060.2| Homo sapiens BAC clone RP11-268B15 from 4, complete sequence
          Length = 174548

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 3     gcacacaaagtacacacatacac 25
             |||||||||||||||||| ||||
Sbjct: 26664 gcacacaaagtacacacacacac 26642
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>gb|AC145621.2| Homo sapiens BAC clone RP11-365B19 from 4, complete sequence
          Length = 167934

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 3     gcacacaaagtacacacatacac 25
             |||||||||||||||||| ||||
Sbjct: 26664 gcacacaaagtacacacacacac 26642
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>gb|AC118282.4| Homo sapiens BAC clone RP11-1281K21 from 4, complete sequence
          Length = 208765

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 3      gcacacaaagtacacacatacac 25
              |||||||||||||||||| ||||
Sbjct: 108433 gcacacaaagtacacacacacac 108411
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>gb|AC119751.3| Homo sapiens BAC clone RP11-241F15 from 4, complete sequence
          Length = 171176

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 3      gcacacaaagtacacacatacac 25
              |||||||||||||||||| ||||
Sbjct: 126803 gcacacaaagtacacacacacac 126825
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>emb|AL591856.26| Human DNA sequence from clone RP11-426M5 on chromosome 22, complete
             sequence
          Length = 179693

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 3     gcacacaaagtacacacatacac 25
             |||||||||||||||||| ||||
Sbjct: 22406 gcacacaaagtacacacacacac 22384
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>emb|BX640538.4| Human DNA sequence from clone RP6-238B6 on chromosome 1, complete
             sequence
          Length = 165731

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 3     gcacacaaagtacacacatacac 25
             |||||||||||||||||| ||||
Sbjct: 98641 gcacacaaagtacacacacacac 98619
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>emb|AL354822.8| Human DNA sequence from clone RP11-474C22 on chromosome 22, complete
             sequence
          Length = 161147

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 3     gcacacaaagtacacacatacac 25
             |||||||||||||||||| ||||
Sbjct: 81973 gcacacaaagtacacacacacac 81995
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>emb|BX546492.4| Human DNA sequence from clone RP11-441E2 on chromosome 22, complete
             sequence
          Length = 165333

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 3     gcacacaaagtacacacatacac 25
             |||||||||||||||||| ||||
Sbjct: 99139 gcacacaaagtacacacacacac 99117
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>emb|AL583842.40| Human DNA sequence from clone RP11-417J8 on chromosome 1, complete
              sequence
          Length = 195588

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 3      gcacacaaagtacacacatacac 25
              |||||||||||||||||| ||||
Sbjct: 104672 gcacacaaagtacacacacacac 104650
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>gb|AE003793.3| Drosophila melanogaster chromosome 2R, section 57 of 73 of the complete
             sequence
          Length = 271902

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 2     cgcacacaaagtacacaca 20
             |||||||||||||||||||
Sbjct: 46794 cgcacacaaagtacacaca 46776
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 7        acaaagtacacacatacac 25
                |||||||||||||||||||
Sbjct: 21672682 acaaagtacacacatacac 21672700
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>emb|AL355793.6| Human DNA sequence from clone RP4-694M10 on chromosome 1, complete
             sequence
          Length = 101333

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 3     gcacacaaagtacacacatacac 25
             |||||||||||||||||| ||||
Sbjct: 17136 gcacacaaagtacacacacacac 17158
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>emb|AL805928.9| Mouse DNA sequence from clone RP23-136C12 on chromosome 2, complete
             sequence
          Length = 192297

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 14    acacacatacacccatcactcgc 36
             |||||||||||| ||||||||||
Sbjct: 75630 acacacatacacacatcactcgc 75608
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>gb|AC102210.6| Mus musculus chromosome 8, clone RP24-351F4, complete sequence
          Length = 165443

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 67    gtaacaaaagaaagttaca 85
             |||||||||||||||||||
Sbjct: 25757 gtaacaaaagaaagttaca 25775
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>emb|AL355973.21| Human DNA sequence from clone RP4-660N4 on chromosome 1, complete
             sequence
          Length = 110898

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 3     gcacacaaagtacacacatacac 25
             |||||||||||||||||| ||||
Sbjct: 73614 gcacacaaagtacacacacacac 73592
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>emb|AL591805.14| Mouse DNA sequence from clone RP23-90N15 on chromosome 2, complete
             sequence
          Length = 93682

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 7     acaaagtacacacatacac 25
             |||||||||||||||||||
Sbjct: 42625 acaaagtacacacatacac 42607


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,359,421
Number of Sequences: 3902068
Number of extensions: 1359421
Number of successful extensions: 105704
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 105560
Number of HSP's gapped (non-prelim): 144
length of query: 152
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 131
effective length of database: 17,151,101,840
effective search space: 2246794341040
effective search space used: 2246794341040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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