ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd23j19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_465257.1| Oryza sativa (japonica cultivar-group), mRNA 426 e-116
2dbj|AK061254.1| Oryza sativa (japonica cultivar-group) cDNA clon... 426 e-116
3dbj|AB040041.1| Oryza sativa copz2 mRNA for nonclathrin coat pro... 426 e-116
4gb|AY104496.1| Zea mays PCO084558 mRNA sequence 406 e-110
5dbj|AB040667.1| Zea mays copz2 mRNA for nonclathrin coat protein... 398 e-108
6gb|BT016177.1| Zea mays clone Contig10 mRNA sequence 391 e-105
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 149 1e-32
8dbj|AP004024.3| Oryza sativa (japonica cultivar-group) genomic D... 149 1e-32
9dbj|AP004798.2| Oryza sativa (japonica cultivar-group) genomic D... 149 1e-32
10dbj|AB040043.1| Lycopersicon esculentum copz2 mRNA for nonclathr... 82 2e-12
11emb|AJ866986.1| Medicago truncatula mRNA for coatomer zeta1 subu... 80 9e-12
12dbj|AP004908.1| Lotus japonicus genomic DNA, chromosome 6, clone... 72 2e-09
13emb|AJ866987.1| Medicago truncatula mRNA for coatomer zeta2 subu... 54 5e-04
14dbj|AK073474.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
15dbj|AB040543.1| Glycine max copz2 mRNA for nonclathrin coat prot... 52 0.002
16gb|AC135102.16| Medicago truncatula clone mth2-8m3, complete seq... 48 0.031
17dbj|AB040040.1| Glycine max copz1 mRNA for nonclathrin coat prot... 48 0.031
18ref|NM_116921.2| Arabidopsis thaliana unknown protein AT4G08520 ... 46 0.12
19gb|AY150422.1| Arabidopsis thaliana putative coatomer protein (A... 46 0.12
20gb|AY074506.1| Arabidopsis thaliana putative coatomer protein (A... 46 0.12
21gb|BT014597.1| Lycopersicon esculentum clone 134072F, mRNA sequence 44 0.48
22gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence 42 1.9
23emb|AL662880.6| Zebrafish DNA sequence from clone BUSM1-182N13 i... 42 1.9
24dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
25gb|AE009499.1| Brucella melitensis 16M chromosome I, section 56 ... 42 1.9
26gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I... 42 1.9
27dbj|AP005905.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
28dbj|AP005590.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
29emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I,... 42 1.9
30gb|AC134869.4| Mus musculus BAC clone RP23-137C6 from chromosome... 40 7.5
31emb|AL049569.13|HSDJ37C10 Human DNA sequence from clone RP1-37C1... 40 7.5
32gb|AC139355.8| Medicago truncatula clone mth2-36o3, complete seq... 40 7.5
33gb|AC093832.2| Homo sapiens BAC clone RP11-402L11 from 4, comple... 40 7.5
34gb|AC034214.5| Homo sapiens chromosome 5 clone CTD-2001E22, comp... 40 7.5
35emb|AJ549502.2|HSA549502 Homo sapiens peptidylarginine deiminase... 40 7.5
36gb|AC026787.5| Homo sapiens chromosome 5 clone CTD-2143L24, comp... 40 7.5
37gb|AC154569.2| Mus musculus BAC clone RP23-385I2 from chromosome... 40 7.5
38gb|AC003015.1|AC003015 Human BAC clone GS1-113H23 from 5p15.2, c... 40 7.5
39gb|AC169177.4| Medicago truncatula chromosome 7 BAC clone mth2-1... 40 7.5
40emb|AL929380.9| Mouse DNA sequence from clone RP23-467E8 on chro... 40 7.5
41emb|AL591712.18| Mouse DNA sequence from clone RP23-138C10 on ch... 40 7.5
42emb|AL683892.12| Mouse DNA sequence from clone RP23-440J15 on ch... 40 7.5 
>ref|XM_465257.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 961

 Score =  426 bits (215), Expect = e-116
 Identities = 344/387 (88%)
 Strand = Plus / Minus

                                                                       
Query: 164 agagatcttgcaaagtgttccctggctgtggccagagcttgggatattgtctgctcagag 223
           ||||||||||||| ||| ||||| || ||||| | ||| || ||||| ||||||||||||
Sbjct: 753 agagatcttgcaaggtgctccctagcagtggctaaagcctgagatatcgtctgctcagag 694

                                                                       
Query: 224 aagggaacagaaccgtcagcagcattggttgcaaccttccccgcaatggtattcgcatct 283
           |||||  ||||||| ||| |||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 693 aagggggcagaaccatcaacagcattggttgcaaccttcccggcaatggtatttgcatct 634

                                                                       
Query: 284 gtttcaagaattatgccgccatcaataatctcatcaatgcagagaagtatcaagtccaag 343
           ||||| ||||||||||||||||| | ||| ||||| ||||||||||||||||||||||  
Sbjct: 633 gtttccagaattatgccgccatctacaatttcatcgatgcagagaagtatcaagtccaga 574

                                                                       
Query: 344 ttctcaagtgcagtcctcttctcaacgtcacccctgagtagaagaccaaccgaatcagca 403
           ||||| |||||||||||||||||||| ||||||||||||| ||||||||| |||||||  
Sbjct: 573 ttctcgagtgcagtcctcttctcaacatcacccctgagtaaaagaccaacagaatcagag 514

                                                                       
Query: 404 aaaccctgtagcacatttgctatgattagctcattctcatcatctccggcagtgacgaag 463
           || |||||||| ||||||||||| || ||||||||||||||||| || || ||||| || 
Sbjct: 513 aagccctgtagtacatttgctataatgagctcattctcatcatcaccagcggtgacaaaa 454

                                                                       
Query: 464 aagtgaaggtcttgtacaaacttgtaaacaacaatattaccatcaagcaatgttatctca 523
           || |||||||||||||||||||| ||||| |||||||  ||||||| |||||||||||||
Sbjct: 453 aaatgaaggtcttgtacaaacttataaacgacaatatagccatcaaacaatgttatctca 394

                                      
Query: 524 gcttctgagcgtgcatttgtcttcaga 550
           |||||||||||||||||||||||||||
Sbjct: 393 gcttctgagcgtgcatttgtcttcaga 367
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>dbj|AK061254.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-A06, full
           insert sequence
          Length = 961

 Score =  426 bits (215), Expect = e-116
 Identities = 344/387 (88%)
 Strand = Plus / Minus

                                                                       
Query: 164 agagatcttgcaaagtgttccctggctgtggccagagcttgggatattgtctgctcagag 223
           ||||||||||||| ||| ||||| || ||||| | ||| || ||||| ||||||||||||
Sbjct: 753 agagatcttgcaaggtgctccctagcagtggctaaagcctgagatatcgtctgctcagag 694

                                                                       
Query: 224 aagggaacagaaccgtcagcagcattggttgcaaccttccccgcaatggtattcgcatct 283
           |||||  ||||||| ||| |||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 693 aagggggcagaaccatcaacagcattggttgcaaccttcccggcaatggtatttgcatct 634

                                                                       
Query: 284 gtttcaagaattatgccgccatcaataatctcatcaatgcagagaagtatcaagtccaag 343
           ||||| ||||||||||||||||| | ||| ||||| ||||||||||||||||||||||  
Sbjct: 633 gtttccagaattatgccgccatctacaatttcatcgatgcagagaagtatcaagtccaga 574

                                                                       
Query: 344 ttctcaagtgcagtcctcttctcaacgtcacccctgagtagaagaccaaccgaatcagca 403
           ||||| |||||||||||||||||||| ||||||||||||| ||||||||| |||||||  
Sbjct: 573 ttctcgagtgcagtcctcttctcaacatcacccctgagtaaaagaccaacagaatcagag 514

                                                                       
Query: 404 aaaccctgtagcacatttgctatgattagctcattctcatcatctccggcagtgacgaag 463
           || |||||||| ||||||||||| || ||||||||||||||||| || || ||||| || 
Sbjct: 513 aagccctgtagtacatttgctataatgagctcattctcatcatcaccagcggtgacaaaa 454

                                                                       
Query: 464 aagtgaaggtcttgtacaaacttgtaaacaacaatattaccatcaagcaatgttatctca 523
           || |||||||||||||||||||| ||||| |||||||  ||||||| |||||||||||||
Sbjct: 453 aaatgaaggtcttgtacaaacttataaacgacaatatagccatcaaacaatgttatctca 394

                                      
Query: 524 gcttctgagcgtgcatttgtcttcaga 550
           |||||||||||||||||||||||||||
Sbjct: 393 gcttctgagcgtgcatttgtcttcaga 367
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>dbj|AB040041.1| Oryza sativa copz2 mRNA for nonclathrin coat protein zeta2-COP,
           partial cds
          Length = 659

 Score =  426 bits (215), Expect = e-116
 Identities = 344/387 (88%)
 Strand = Plus / Minus

                                                                       
Query: 164 agagatcttgcaaagtgttccctggctgtggccagagcttgggatattgtctgctcagag 223
           ||||||||||||| ||| ||||| || ||||| | ||| || ||||| ||||||||||||
Sbjct: 488 agagatcttgcaaggtgctccctagcagtggctaaagcctgagatatcgtctgctcagag 429

                                                                       
Query: 224 aagggaacagaaccgtcagcagcattggttgcaaccttccccgcaatggtattcgcatct 283
           |||||  ||||||| ||| |||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 428 aagggggcagaaccatcaacagcattggttgcaaccttcccggcaatggtatttgcatct 369

                                                                       
Query: 284 gtttcaagaattatgccgccatcaataatctcatcaatgcagagaagtatcaagtccaag 343
           ||||| ||||||||||||||||| | ||| ||||| ||||||||||||||||||||||  
Sbjct: 368 gtttccagaattatgccgccatctacaatttcatcgatgcagagaagtatcaagtccaga 309

                                                                       
Query: 344 ttctcaagtgcagtcctcttctcaacgtcacccctgagtagaagaccaaccgaatcagca 403
           ||||| |||||||||||||||||||| ||||||||||||| ||||||||| |||||||  
Sbjct: 308 ttctcgagtgcagtcctcttctcaacatcacccctgagtaaaagaccaacagaatcagag 249

                                                                       
Query: 404 aaaccctgtagcacatttgctatgattagctcattctcatcatctccggcagtgacgaag 463
           || |||||||| ||||||||||| || ||||||||||||||||| || || ||||| || 
Sbjct: 248 aagccctgtagtacatttgctataatgagctcattctcatcatcaccagcggtgacaaaa 189

                                                                       
Query: 464 aagtgaaggtcttgtacaaacttgtaaacaacaatattaccatcaagcaatgttatctca 523
           || |||||||||||||||||||| ||||| |||||||  ||||||| |||||||||||||
Sbjct: 188 aaatgaaggtcttgtacaaacttataaacgacaatatagccatcaaacaatgttatctca 129

                                      
Query: 524 gcttctgagcgtgcatttgtcttcaga 550
           |||||||||||||||||||||||||||
Sbjct: 128 gcttctgagcgtgcatttgtcttcaga 102
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>gb|AY104496.1| Zea mays PCO084558 mRNA sequence
          Length = 1023

 Score =  406 bits (205), Expect = e-110
 Identities = 343/389 (88%)
 Strand = Plus / Minus

                                                                       
Query: 158 ttcagaagagatcttgcaaagtgttccctggctgtggccagagcttgggatattgtctgc 217
           ||||| ||||||||||||| ||| |||||||||||||| || || || ||||| ||||||
Sbjct: 777 ttcagtagagatcttgcaaggtgctccctggctgtggctagcgcctgagatatcgtctgc 718

                                                                       
Query: 218 tcagagaagggaacagaaccgtcagcagcattggttgcaaccttccccgcaatggtattc 277
           ||||| ||||| |||||||| ||| ||||||||||||||||||| || |||||||| || 
Sbjct: 717 tcagaaaagggcacagaaccatcaacagcattggttgcaaccttaccagcaatggtgttt 658

                                                                       
Query: 278 gcatctgtttcaagaattatgccgccatcaataatctcatcaatgcagagaagtatcaag 337
           ||||||||||| || || || || ||||| | ||| ||||| ||||||||||||||||| 
Sbjct: 657 gcatctgtttccaggatgattcccccatctacaatttcatcgatgcagagaagtatcaaa 598

                                                                       
Query: 338 tccaagttctcaagtgcagtcctcttctcaacgtcacccctgagtagaagaccaaccgaa 397
           |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||| |||
Sbjct: 597 tccaagttctcaagcgcagtccgcttctcaacatcacccctgagtagaagaccaacagaa 538

                                                                       
Query: 398 tcagcaaaaccctgtagcacatttgctatgattagctcattctcatcatctccggcagtg 457
           |||| |||||| ||||| ||| |||||| ||| |||||||||||||||||||| || |||
Sbjct: 537 tcagaaaaaccttgtagtacacttgctaagatgagctcattctcatcatctccagcggtg 478

                                                                       
Query: 458 acgaagaagtgaaggtcttgtacaaacttgtaaacaacaatattaccatcaagcaatgtt 517
           || || ||||||||||| ||||||||||||||||| ||||||| |||||||| |||||||
Sbjct: 477 acaaaaaagtgaaggtcatgtacaaacttgtaaacgacaatataaccatcaaacaatgtt 418

                                        
Query: 518 atctcagcttctgagcgtgcatttgtctt 546
           |||||||||||||  ||||||||||||||
Sbjct: 417 atctcagcttctgtccgtgcatttgtctt 389
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>dbj|AB040667.1| Zea mays copz2 mRNA for nonclathrin coat protein zeta2-COP,
           complete cds
          Length = 910

 Score =  398 bits (201), Expect = e-108
 Identities = 342/389 (87%)
 Strand = Plus / Minus

                                                                       
Query: 158 ttcagaagagatcttgcaaagtgttccctggctgtggccagagcttgggatattgtctgc 217
           ||||| ||||||||||||| ||| ||||| |||||||| || || || ||||| ||||||
Sbjct: 601 ttcagtagagatcttgcaaggtgctccctagctgtggctagtgcctgagatatcgtctgc 542

                                                                       
Query: 218 tcagagaagggaacagaaccgtcagcagcattggttgcaaccttccccgcaatggtattc 277
           ||||| ||||| |||||||| ||| ||||||||||||||||||| || |||||||| || 
Sbjct: 541 tcagaaaagggcacagaaccatcaacagcattggttgcaaccttaccagcaatggtgttt 482

                                                                       
Query: 278 gcatctgtttcaagaattatgccgccatcaataatctcatcaatgcagagaagtatcaag 337
           ||||||||||| || || || || ||||| | ||| ||||| ||||||||||||||||| 
Sbjct: 481 gcatctgtttccaggatgattcccccatctacaatttcatcgatgcagagaagtatcaaa 422

                                                                       
Query: 338 tccaagttctcaagtgcagtcctcttctcaacgtcacccctgagtagaagaccaaccgaa 397
           |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||| |||
Sbjct: 421 tccaagttctcaagcgcagtccgcttctcaacatcacccctgagtagaagaccaacagaa 362

                                                                       
Query: 398 tcagcaaaaccctgtagcacatttgctatgattagctcattctcatcatctccggcagtg 457
           |||| |||||| ||||| ||| |||||| ||| |||||||||||||||||||| || |||
Sbjct: 361 tcagaaaaaccatgtagtacacttgctaagatgagctcattctcatcatctccagcggtg 302

                                                                       
Query: 458 acgaagaagtgaaggtcttgtacaaacttgtaaacaacaatattaccatcaagcaatgtt 517
           || || ||||||||||| ||||||||||||||||| ||||||| |||||||| |||||||
Sbjct: 301 acaaaaaagtgaaggtcatgtacaaacttgtaaacgacaatataaccatcaaacaatgtt 242

                                        
Query: 518 atctcagcttctgagcgtgcatttgtctt 546
           |||||||||||||  ||||||||||||||
Sbjct: 241 atctcagcttctgtccgtgcatttgtctt 213
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>gb|BT016177.1| Zea mays clone Contig10 mRNA sequence
          Length = 1102

 Score =  391 bits (197), Expect = e-105
 Identities = 341/389 (87%)
 Strand = Plus / Minus

                                                                       
Query: 158 ttcagaagagatcttgcaaagtgttccctggctgtggccagagcttgggatattgtctgc 217
           ||||| ||||||||||||| | | ||||| |||||||| || || || ||||| ||||||
Sbjct: 744 ttcagtagagatcttgcaaggggctccctagctgtggctagtgcctgagatatcgtctgc 685

                                                                       
Query: 218 tcagagaagggaacagaaccgtcagcagcattggttgcaaccttccccgcaatggtattc 277
           ||||| ||||| |||||||| ||| ||||||||||||||||||| || |||||||| || 
Sbjct: 684 tcagaaaagggcacagaaccatcaacagcattggttgcaaccttaccagcaatggtgttt 625

                                                                       
Query: 278 gcatctgtttcaagaattatgccgccatcaataatctcatcaatgcagagaagtatcaag 337
           ||||||||||| || || || || ||||| | ||| ||||| ||||||||||||||||| 
Sbjct: 624 gcatctgtttccaggatgattcccccatctacaatttcatcgatgcagagaagtatcaaa 565

                                                                       
Query: 338 tccaagttctcaagtgcagtcctcttctcaacgtcacccctgagtagaagaccaaccgaa 397
           |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||| |||
Sbjct: 564 tccaagttctcaagcgcagtccgcttctcaacatcacccctgagtagaagaccaacagaa 505

                                                                       
Query: 398 tcagcaaaaccctgtagcacatttgctatgattagctcattctcatcatctccggcagtg 457
           |||| |||||| ||||| ||| |||||| ||| |||||||||||||||||||| || |||
Sbjct: 504 tcagaaaaaccatgtagtacacttgctaagatgagctcattctcatcatctccagcggtg 445

                                                                       
Query: 458 acgaagaagtgaaggtcttgtacaaacttgtaaacaacaatattaccatcaagcaatgtt 517
           || || ||||||||||| ||||||||||||||||| ||||||| |||||||| |||||||
Sbjct: 444 acaaaaaagtgaaggtcatgtacaaacttgtaaacgacaatataaccatcaaacaatgtt 385

                                        
Query: 518 atctcagcttctgagcgtgcatttgtctt 546
           |||||||||||||  ||||||||||||||
Sbjct: 384 atctcagcttctgtccgtgcatttgtctt 356
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  149 bits (75), Expect = 1e-32
 Identities = 132/151 (87%)
 Strand = Plus / Minus

                                                                            
Query: 376      cctgagtagaagaccaaccgaatcagcaaaaccctgtagcacatttgctatgattagctc 435
                |||||||| ||||||||| |||||||  || |||||||| ||||||||||| || |||||
Sbjct: 12610520 cctgagtaaaagaccaacagaatcagagaagccctgtagtacatttgctataatgagctc 12610461

                                                                            
Query: 436      attctcatcatctccggcagtgacgaagaagtgaaggtcttgtacaaacttgtaaacaac 495
                |||||||||||| || || ||||| || || |||||||||||||||||||| ||||| ||
Sbjct: 12610460 attctcatcatcaccagcggtgacaaaaaaatgaaggtcttgtacaaacttataaacgac 12610401

                                               
Query: 496      aatattaccatcaagcaatgttatctcagct 526
                |||||  ||||||| ||||||||||||||||
Sbjct: 12610400 aatatagccatcaaacaatgttatctcagct 12610370



 Score =  115 bits (58), Expect = 2e-22
 Identities = 79/86 (91%)
 Strand = Plus / Minus

                                                                            
Query: 214      ctgctcagagaagggaacagaaccgtcagcagcattggttgcaaccttccccgcaatggt 273
                |||||||||||||||  ||||||| ||| |||||||||||||||||||||| ||||||||
Sbjct: 12612019 ctgctcagagaagggggcagaaccatcaacagcattggttgcaaccttcccggcaatggt 12611960

                                          
Query: 274      attcgcatctgtttcaagaattatgc 299
                ||| ||||||||||| ||||||||||
Sbjct: 12611959 atttgcatctgtttccagaattatgc 12611934



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 72/80 (90%)
 Strand = Plus / Minus

                                                                            
Query: 299      ccgccatcaataatctcatcaatgcagagaagtatcaagtccaagttctcaagtgcagtc 358
                |||||||| | ||| ||||| ||||||||||||||||||||||  ||||| |||||||||
Sbjct: 12610687 ccgccatctacaatttcatcgatgcagagaagtatcaagtccagattctcgagtgcagtc 12610628

                                    
Query: 359      ctcttctcaacgtcacccct 378
                ||||||||||| ||||||||
Sbjct: 12610627 ctcttctcaacatcacccct 12610608



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                          
Query: 525      cttctgagcgtgcatttgtcttcaga 550
                ||||||||||||||||||||||||||
Sbjct: 12609546 cttctgagcgtgcatttgtcttcaga 12609521
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>dbj|AP004024.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1134_B09
          Length = 105247

 Score =  149 bits (75), Expect = 1e-32
 Identities = 132/151 (87%)
 Strand = Plus / Minus

                                                                        
Query: 376  cctgagtagaagaccaaccgaatcagcaaaaccctgtagcacatttgctatgattagctc 435
            |||||||| ||||||||| |||||||  || |||||||| ||||||||||| || |||||
Sbjct: 7579 cctgagtaaaagaccaacagaatcagagaagccctgtagtacatttgctataatgagctc 7520

                                                                        
Query: 436  attctcatcatctccggcagtgacgaagaagtgaaggtcttgtacaaacttgtaaacaac 495
            |||||||||||| || || ||||| || || |||||||||||||||||||| ||||| ||
Sbjct: 7519 attctcatcatcaccagcggtgacaaaaaaatgaaggtcttgtacaaacttataaacgac 7460

                                           
Query: 496  aatattaccatcaagcaatgttatctcagct 526
            |||||  ||||||| ||||||||||||||||
Sbjct: 7459 aatatagccatcaaacaatgttatctcagct 7429



 Score =  115 bits (58), Expect = 2e-22
 Identities = 79/86 (91%)
 Strand = Plus / Minus

                                                                        
Query: 214  ctgctcagagaagggaacagaaccgtcagcagcattggttgcaaccttccccgcaatggt 273
            |||||||||||||||  ||||||| ||| |||||||||||||||||||||| ||||||||
Sbjct: 9078 ctgctcagagaagggggcagaaccatcaacagcattggttgcaaccttcccggcaatggt 9019

                                      
Query: 274  attcgcatctgtttcaagaattatgc 299
            ||| ||||||||||| ||||||||||
Sbjct: 9018 atttgcatctgtttccagaattatgc 8993



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 72/80 (90%)
 Strand = Plus / Minus

                                                                        
Query: 299  ccgccatcaataatctcatcaatgcagagaagtatcaagtccaagttctcaagtgcagtc 358
            |||||||| | ||| ||||| ||||||||||||||||||||||  ||||| |||||||||
Sbjct: 7746 ccgccatctacaatttcatcgatgcagagaagtatcaagtccagattctcgagtgcagtc 7687

                                
Query: 359  ctcttctcaacgtcacccct 378
            ||||||||||| ||||||||
Sbjct: 7686 ctcttctcaacatcacccct 7667



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 525  cttctgagcgtgcatttgtcttcaga 550
            ||||||||||||||||||||||||||
Sbjct: 6605 cttctgagcgtgcatttgtcttcaga 6580
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>dbj|AP004798.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0572D06
          Length = 148920

 Score =  149 bits (75), Expect = 1e-32
 Identities = 132/151 (87%)
 Strand = Plus / Minus

                                                                          
Query: 376    cctgagtagaagaccaaccgaatcagcaaaaccctgtagcacatttgctatgattagctc 435
              |||||||| ||||||||| |||||||  || |||||||| ||||||||||| || |||||
Sbjct: 115053 cctgagtaaaagaccaacagaatcagagaagccctgtagtacatttgctataatgagctc 114994

                                                                          
Query: 436    attctcatcatctccggcagtgacgaagaagtgaaggtcttgtacaaacttgtaaacaac 495
              |||||||||||| || || ||||| || || |||||||||||||||||||| ||||| ||
Sbjct: 114993 attctcatcatcaccagcggtgacaaaaaaatgaaggtcttgtacaaacttataaacgac 114934

                                             
Query: 496    aatattaccatcaagcaatgttatctcagct 526
              |||||  ||||||| ||||||||||||||||
Sbjct: 114933 aatatagccatcaaacaatgttatctcagct 114903



 Score =  115 bits (58), Expect = 2e-22
 Identities = 79/86 (91%)
 Strand = Plus / Minus

                                                                          
Query: 214    ctgctcagagaagggaacagaaccgtcagcagcattggttgcaaccttccccgcaatggt 273
              |||||||||||||||  ||||||| ||| |||||||||||||||||||||| ||||||||
Sbjct: 116552 ctgctcagagaagggggcagaaccatcaacagcattggttgcaaccttcccggcaatggt 116493

                                        
Query: 274    attcgcatctgtttcaagaattatgc 299
              ||| ||||||||||| ||||||||||
Sbjct: 116492 atttgcatctgtttccagaattatgc 116467



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 72/80 (90%)
 Strand = Plus / Minus

                                                                          
Query: 299    ccgccatcaataatctcatcaatgcagagaagtatcaagtccaagttctcaagtgcagtc 358
              |||||||| | ||| ||||| ||||||||||||||||||||||  ||||| |||||||||
Sbjct: 115220 ccgccatctacaatttcatcgatgcagagaagtatcaagtccagattctcgagtgcagtc 115161

                                  
Query: 359    ctcttctcaacgtcacccct 378
              ||||||||||| ||||||||
Sbjct: 115160 ctcttctcaacatcacccct 115141



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                        
Query: 525    cttctgagcgtgcatttgtcttcaga 550
              ||||||||||||||||||||||||||
Sbjct: 114079 cttctgagcgtgcatttgtcttcaga 114054
to top
>dbj|AB040043.1| Lycopersicon esculentum copz2 mRNA for nonclathrin coat protein
           zeta2-COP, complete cds
          Length = 862

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 212/269 (78%)
 Strand = Plus / Minus

                                                                       
Query: 279 catctgtttcaagaattatgccgccatcaataatctcatcaatgcagagaagtatcaagt 338
           |||||||||||||||| || || ||||| | ||||||||| | ||| ||||| ||||| |
Sbjct: 484 catctgtttcaagaatcatccctccatccacaatctcatccaagcacagaagaatcaaat 425

                                                                       
Query: 339 ccaagttctcaagtgcagtcctcttctcaacgtcacccctgagtagaagaccaaccgaat 398
           ||||||||||||| ||   |||||  ||||| | || |||||||| |||   ||| | ||
Sbjct: 424 ccaagttctcaagagcctccctctgttcaacattactcctgagtaaaagggtaactgcat 365

                                                                       
Query: 399 cagcaaaaccctgtagcacatttgctatgattagctcattctcatcatctccggcagtga 458
           ||   || ||||| || ||| | ||||  ||||| ||||| |||||||| ||  | || |
Sbjct: 364 catagaagccctggagaacagtggctagaattagttcattttcatcatcacctcccgtca 305

                                                                       
Query: 459 cgaagaagtgaaggtcttgtacaaacttgtaaacaacaatattaccatcaagcaatgtta 518
           | || |||||||||||||| |||||||| || |||||||| ||||  |||| || || ||
Sbjct: 304 caaaaaagtgaaggtcttgcacaaacttatagacaacaatgttactgtcaaacattgcta 245

                                        
Query: 519 tctcagcttctgagcgtgcatttgtcttc 547
           |||||||||| |  || ||||||||||||
Sbjct: 244 tctcagcttcagttcgagcatttgtcttc 216
to top
>emb|AJ866986.1| Medicago truncatula mRNA for coatomer zeta1 subunit (copz1 gene)
          Length = 543

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 97/116 (83%)
 Strand = Plus / Minus

                                                                       
Query: 431 agctcattctcatcatctccggcagtgacgaagaagtgaaggtcttgtacaaacttgtaa 490
           |||||||| |||||||| ||  ||||||| ||||| || | |||||| ||||| ||||||
Sbjct: 266 agctcattttcatcatcaccaccagtgacaaagaaatgcaagtcttgcacaaatttgtaa 207

                                                                   
Query: 491 acaacaatattaccatcaagcaatgttatctcagcttctgagcgtgcatttgtctt 546
           ||||| |||||    ||||||| |||||||||||||||||  || |||||||||||
Sbjct: 206 acaacgatattgttctcaagcagtgttatctcagcttctgtccgcgcatttgtctt 151



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 302 ccatcaataatctcatcaatgcagagaagtatcaagtccaagttctcaagtgc 354
           ||||||| ||||||||||| ||| | ||| || |  |||||||||||||||||
Sbjct: 395 ccatcaacaatctcatcaaggcataaaagaatgagatccaagttctcaagtgc 343
to top
>dbj|AP004908.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT12N11, TM0066,
            complete sequence
          Length = 79585

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                    
Query: 299  ccgccatcaataatctcatcaatgcagagaagtatcaagtccaagttctcaagtgc 354
            |||||||||||||| ||||||||||| ||||| ||||  |||||||||||||||||
Sbjct: 7194 ccgccatcaataatttcatcaatgcaaagaagaatcagatccaagttctcaagtgc 7249



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                  
Query: 461  aagaagtgaaggtcttgtacaaacttgtaaacaacaat 498
            ||||||||||| ||||| ||||||||||||||||||||
Sbjct: 7475 aagaagtgaagatcttggacaaacttgtaaacaacaat 7512



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                 
Query: 161  agaagagatcttgcaaagtgttccctggctgtggcca 197
            ||||| ||||||||||| |||||||||||||||||||
Sbjct: 6005 agaagggatcttgcaaaatgttccctggctgtggcca 6041
to top
>emb|AJ866987.1| Medicago truncatula mRNA for coatomer zeta2 subunit (copz2 gene)
          Length = 549

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                       
Query: 284 gtttcaagaattatgccgccatcaataatctcatcaatgcagagaagtatcaagtccaag 343
           ||||||||||| || ||  |||||||||| ||||||||||| |  || || | |||||||
Sbjct: 419 gtttcaagaataatacctgcatcaataatttcatcaatgcacaatagaatgaggtccaag 360

                      
Query: 344 ttctcaagtgc 354
           |||||||||||
Sbjct: 359 ttctcaagtgc 349



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 461 aagaagtgaaggtcttgtacaaacttgtaaac 492
           ||||||||||| ||||| ||||||||||||||
Sbjct: 242 aagaagtgaagatcttggacaaacttgtaaac 211
to top
>dbj|AK073474.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045O22, full
           insert sequence
          Length = 1196

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 525 cttctgagcgtgcatttgtcttcaga 550
           ||||||||||||||||||||||||||
Sbjct: 393 cttctgagcgtgcatttgtcttcaga 368
to top
>dbj|AB040543.1| Glycine max copz2 mRNA for nonclathrin coat protein zeta2-COP,
           complete cds
          Length = 833

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 461 aagaagtgaaggtcttgtacaaacttgtaaacaacaat 498
           ||||||||||| ||||| ||||||||||||| ||||||
Sbjct: 238 aagaagtgaagatcttggacaaacttgtaaagaacaat 201



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 161 agaagagatcttgcaaagtgttccctggctgtggcca 197
           ||||| || |||||||  |||||||||||||||||||
Sbjct: 538 agaagggaccttgcaagatgttccctggctgtggcca 502



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 284 gtttcaagaattatgccgccatcaataatctcatcaatgca 324
           |||||||| || || |||||||||| ||| |||||||||||
Sbjct: 415 gtttcaagtatgataccgccatcaacaatttcatcaatgca 375
to top
>gb|AC135102.16| Medicago truncatula clone mth2-8m3, complete sequence
          Length = 144042

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                 
Query: 303   catcaataatctcatcaatgcagagaagtatcaagtccaagttctcaagtgc 354
             |||||||||| ||||||||||| |  || || | ||||||||||||||||||
Sbjct: 99210 catcaataatttcatcaatgcacaatagaatgaggtccaagttctcaagtgc 99159



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 461   aagaagtgaaggtcttgtacaaacttgtaaac 492
             ||||||||||| ||||| ||||||||||||||
Sbjct: 98931 aagaagtgaagatcttggacaaacttgtaaac 98900
to top
>dbj|AB040040.1| Glycine max copz1 mRNA for nonclathrin coat protein zeta1-COP,
           complete cds
          Length = 820

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 93/116 (80%)
 Strand = Plus / Minus

                                                                       
Query: 431 agctcattctcatcatctccggcagtgacgaagaagtgaaggtcttgtacaaacttgtaa 490
           |||||||| ||||| || ||  ||||||| || || || |||||||||||||| ||||||
Sbjct: 306 agctcattttcatcttcaccaccagtgacaaaaaaatgcaggtcttgtacaaatttgtaa 247

                                                                   
Query: 491 acaacaatattaccatcaagcaatgttatctcagcttctgagcgtgcatttgtctt 546
           | ||  |||||    ||||| | ||||| |||||||||||  || |||||||||||
Sbjct: 246 ataatgatattgttctcaagtagtgttacctcagcttctgtacgagcatttgtctt 191
to top
>ref|NM_116921.2| Arabidopsis thaliana unknown protein AT4G08520 mRNA, complete cds
          Length = 836

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                       
Query: 480 caaacttgtaaacaacaatattaccatcaagcaatgttatctcagcttctgagcgtgcat 539
           ||||||| || |||||||||||||  || | || ||| ||||||||||||| ||| ||||
Sbjct: 280 caaacttatagacaacaatattactctccaacagtgtgatctcagcttctgtgcgagcat 221

                  
Query: 540 ttgtctt 546
           | |||||
Sbjct: 220 tggtctt 214
to top
>gb|AY150422.1| Arabidopsis thaliana putative coatomer protein (At4g08520) mRNA,
           complete cds
          Length = 577

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                       
Query: 480 caaacttgtaaacaacaatattaccatcaagcaatgttatctcagcttctgagcgtgcat 539
           ||||||| || |||||||||||||  || | || ||| ||||||||||||| ||| ||||
Sbjct: 220 caaacttatagacaacaatattactctccaacagtgtgatctcagcttctgtgcgagcat 161

                  
Query: 540 ttgtctt 546
           | |||||
Sbjct: 160 tggtctt 154
to top
>gb|AY074506.1| Arabidopsis thaliana putative coatomer protein (At4g08520) mRNA,
           complete cds
          Length = 844

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                       
Query: 480 caaacttgtaaacaacaatattaccatcaagcaatgttatctcagcttctgagcgtgcat 539
           ||||||| || |||||||||||||  || | || ||| ||||||||||||| ||| ||||
Sbjct: 272 caaacttatagacaacaatattactctccaacagtgtgatctcagcttctgtgcgagcat 213

                  
Query: 540 ttgtctt 546
           | |||||
Sbjct: 212 tggtctt 206
to top
>gb|BT014597.1| Lycopersicon esculentum clone 134072F, mRNA sequence
          Length = 759

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 70/86 (81%)
 Strand = Plus / Minus

                                                                       
Query: 461 aagaagtgaaggtcttgtacaaacttgtaaacaacaatattaccatcaagcaatgttatc 520
           ||||| ||||| |||||  |||||||||| |||||||||| |  ||||| || ||| |||
Sbjct: 332 aagaaatgaagatcttgagcaaacttgtagacaacaatataattatcaaacattgtaatc 273

                                     
Query: 521 tcagcttctgagcgtgcatttgtctt 546
           || |||||||  |  |||||||||||
Sbjct: 272 tccgcttctgccctagcatttgtctt 247
to top
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence
          Length = 2107794

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 442     atcatctccggcagtgacgaa 462
               |||||||||||||||||||||
Sbjct: 1397965 atcatctccggcagtgacgaa 1397945
to top
>emb|AL662880.6| Zebrafish DNA sequence from clone BUSM1-182N13 in linkage group 23
             Contains a novel gene similar to PHLDA3, part of two novel
             genes, a gene for a novel troponin I, the tnnt2 gene for
             cardiac troponin T2 and three CpG islands, complete
             sequence
          Length = 103409

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 493   aacaatattaccatcaagcaatgttatct 521
             |||| ||||||||||||| ||||||||||
Sbjct: 55970 aacattattaccatcaagtaatgttatct 55942
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                    
Query: 324     agagaagtatcaagtccaagttctcaagtgcagtcctcttctcaacgtcaccc 376
               |||||||||||| |||||||||||  ||||| |   |||||||||| ||||||
Sbjct: 3880624 agagaagtatcatgtccaagttcttgagtgcggctgtcttctcaacatcaccc 3880676
to top
>gb|AE009499.1| Brucella melitensis 16M chromosome I, section 56 of 195 of the
            complete sequence
          Length = 10455

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 442  atcatctccggcagtgacgaa 462
            |||||||||||||||||||||
Sbjct: 1742 atcatctccggcagtgacgaa 1762
to top
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence
          Length = 2124241

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 442     atcatctccggcagtgacgaa 462
               |||||||||||||||||||||
Sbjct: 1416048 atcatctccggcagtgacgaa 1416028
to top
>dbj|AP005905.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1080A02
          Length = 151360

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                   
Query: 324    agagaagtatcaagtccaagttctcaagtgcagtcctcttctcaacgtcaccc 376
              |||||||||||| |||||||||||  ||||| |   |||||||||| ||||||
Sbjct: 120140 agagaagtatcatgtccaagttcttgagtgcggctgtcttctcaacatcaccc 120192
to top
>dbj|AP005590.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0574F11
          Length = 159891

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                  
Query: 324   agagaagtatcaagtccaagttctcaagtgcagtcctcttctcaacgtcaccc 376
             |||||||||||| |||||||||||  ||||| |   |||||||||| ||||||
Sbjct: 12136 agagaagtatcatgtccaagttcttgagtgcggctgtcttctcaacatcaccc 12188
to top
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain
               2308
          Length = 2121359

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 442     atcatctccggcagtgacgaa 462
               |||||||||||||||||||||
Sbjct: 1413198 atcatctccggcagtgacgaa 1413178
to top
>gb|AC134869.4| Mus musculus BAC clone RP23-137C6 from chromosome 13, complete sequence
          Length = 213473

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 198    gagcttgggatattgtctgc 217
              ||||||||||||||||||||
Sbjct: 149295 gagcttgggatattgtctgc 149314
to top
>emb|AL049569.13|HSDJ37C10 Human DNA sequence from clone RP1-37C10 on chromosome 1p35.2-35.21
             Contains the 3' end of the CROCC gene for ciliary rootlet
             coiled-coil rootletin (KIAA0445), the MFAP2 gene for
             microfibrillar-associated protein 2, a novel gene, the
             gene for a novel protein, the SDHB gene for succinate
             dehydrogenase complex subunit B iron sulfur (Ip), the
             PADI2 gene for type II peptidyl arginine deiminase,
             complete sequence
          Length = 216497

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 183   ccctggctgtggccagagct 202
             ||||||||||||||||||||
Sbjct: 37396 ccctggctgtggccagagct 37377
to top
>gb|AC139355.8| Medicago truncatula clone mth2-36o3, complete sequence
          Length = 108135

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                         
Query: 455   gtgacgaagaagtgaaggtcttgtacaaacttgtaaacaacaatattaccatcaagcaat 514
             ||||| ||||| || ||||||||| |||| ||||||| ||  |||||    ||||| |||
Sbjct: 15994 gtgacaaagaaatgcaggtcttgtgcaaatttgtaaataatgatattgttctcaagtaat 15935

                         
Query: 515   gttatctcagct 526
             ||||||||||||
Sbjct: 15934 gttatctcagct 15923
to top
>gb|AC093832.2| Homo sapiens BAC clone RP11-402L11 from 4, complete sequence
          Length = 187232

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     atagtattacatatcatttaagaa 24
             |||||||| |||||||||||||||
Sbjct: 12903 atagtattgcatatcatttaagaa 12880
to top
>gb|AC034214.5| Homo sapiens chromosome 5 clone CTD-2001E22, complete sequence
          Length = 108661

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 239   tcagcagcattggttgcaac 258
             ||||||||||||||||||||
Sbjct: 10456 tcagcagcattggttgcaac 10475
to top
>emb|AJ549502.2|HSA549502 Homo sapiens peptidylarginine deiminase gene locus (PADI12346 genes)
          Length = 355060

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 183   ccctggctgtggccagagct 202
             ||||||||||||||||||||
Sbjct: 66145 ccctggctgtggccagagct 66164
to top
>gb|AC026787.5| Homo sapiens chromosome 5 clone CTD-2143L24, complete sequence
          Length = 146296

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 239   tcagcagcattggttgcaac 258
             ||||||||||||||||||||
Sbjct: 44132 tcagcagcattggttgcaac 44113
to top
>gb|AC154569.2| Mus musculus BAC clone RP23-385I2 from chromosome 17, complete sequence
          Length = 180258

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 198   gagcttgggatattgtctgc 217
             ||||||||||||||||||||
Sbjct: 54434 gagcttgggatattgtctgc 54453
to top
>gb|AC003015.1|AC003015 Human BAC clone GS1-113H23 from 5p15.2, complete sequence
          Length = 132953

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 239   tcagcagcattggttgcaac 258
             ||||||||||||||||||||
Sbjct: 60553 tcagcagcattggttgcaac 60572
to top
>gb|AC169177.4| Medicago truncatula chromosome 7 BAC clone mth2-1p4, complete sequence
          Length = 124443

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 59/72 (81%)
 Strand = Plus / Plus

                                                                         
Query: 455   gtgacgaagaagtgaaggtcttgtacaaacttgtaaacaacaatattaccatcaagcaat 514
             ||||| ||||| || ||||||||| |||| ||||||| ||  |||||    ||||| |||
Sbjct: 19711 gtgacaaagaaatgcaggtcttgtgcaaatttgtaaataatgatattgttctcaagtaat 19770

                         
Query: 515   gttatctcagct 526
             ||||||||||||
Sbjct: 19771 gttatctcagct 19782
to top
>emb|AL929380.9| Mouse DNA sequence from clone RP23-467E8 on chromosome 2, complete
             sequence
          Length = 140917

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     ttacatatcatttaagaaga 26
             ||||||||||||||||||||
Sbjct: 56902 ttacatatcatttaagaaga 56883
to top
>emb|AL591712.18| Mouse DNA sequence from clone RP23-138C10 on chromosome 2, complete
             sequence
          Length = 168958

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 135   cagaagaagcagtggtttct 154
             ||||||||||||||||||||
Sbjct: 13112 cagaagaagcagtggtttct 13131
to top
>emb|AL683892.12| Mouse DNA sequence from clone RP23-440J15 on chromosome X, complete
             sequence
          Length = 136809

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 302   ccatcaataatctcatcaat 321
             ||||||||||||||||||||
Sbjct: 70551 ccatcaataatctcatcaat 70532


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,579,855
Number of Sequences: 3902068
Number of extensions: 5579855
Number of successful extensions: 105755
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 105565
Number of HSP's gapped (non-prelim): 188
length of query: 550
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 527
effective length of database: 17,143,297,704
effective search space: 9034517890008
effective search space used: 9034517890008
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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