Clone Information

BLAST Search Result

Clone Name	rbasd23j16
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CHD1_YEAST (P32657) Chromo domain protein 1 (EC 3.6.1.-) (ATP-de...	39	0.005
2	RPOE_STRR6 (P66718) Probable DNA-directed RNA polymerase delta s...	37	0.019
3	RPOE_STRPN (P66717) Probable DNA-directed RNA polymerase delta s...	37	0.019
4	RPOE_STRP6 (Q5XA09) Probable DNA-directed RNA polymerase delta s...	37	0.033
5	FKBP4_EMENI (P0C1B0) FK506-binding protein 4 (EC 5.2.1.8) (Pepti...	34	0.16
6	GARP_PLAFF (P13816) Glutamic acid-rich protein precursor	34	0.21
7	TNNT_DROME (P19351) Troponin T, skeletal muscle (Protein upheld)...	33	0.36
8	IE68_PRVKA (P24827) Immediate-early protein RSP40	33	0.47
9	PP4R2_KLULA (Q6CPD5) Serine/threonine-protein phosphatase 4 regu...	33	0.47
10	TOM1_ASHGO (Q756G2) Probable E3 ubiquitin protein ligase TOM1 (E...	32	0.62
11	YNU6_YEAST (P40161) Hypothetical 51.6 kDa protein in SSB2-SPX18 ...	32	0.62
12	GNT1_GIBZE (Q4HVS2) Glucose N-acetyltransferase 1 (EC 2.4.1.-) (...	32	0.80
13	RS3_HALMA (P20281) 30S ribosomal protein S3P (HmaS3) (HS1)	32	0.80
14	NUCL_RAT (P13383) Nucleolin (Protein C23)	32	0.80
15	RPOE_STRP8 (Q8NZF7) Probable DNA-directed RNA polymerase delta s...	32	1.0
16	SPT5_YEAST (P27692) Transcription elongation factor SPT5 (Chroma...	32	1.0
17	CLF1_DEBHA (Q6BSP7) Pre-mRNA-splicing factor CLF1	31	1.4
18	DBP10_DEBHA (Q6BL34) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)	31	1.4
19	SPRC_HUMAN (P09486) SPARC precursor (Secreted protein acidic and...	31	1.8
20	YNL4_SCHPO (Q9P6S3) Hypothetical protein C27.04 in chromosome II	30	2.3
21	FKBP3_YARLI (Q6C4C9) FK506-binding protein 3 (EC 5.2.1.8) (Pepti...	30	2.3
22	UPL2_ARATH (Q8H0T4) E3 ubiquitin protein ligase UPL2 (EC 6.3.2.-...	30	2.3
23	NOG2_NEUCR (Q7SHR8) Nucleolar GTP-binding protein 2	30	2.3
24	GCY31_CAEEL (Q86C56) Soluble guanylate cyclase gcy-31 (EC 4.6.1.2)	30	2.3
25	TNNT_PERAM (Q9XZ71) Troponin T (TnT)	30	3.1
26	AN32E_MOUSE (P97822) Acidic leucine-rich nuclear phosphoprotein ...	30	3.1
27	AGL8_ARATH (Q38876) Agamous-like MADS-box protein AGL8 (Floral h...	30	3.1
28	YKA4_CAEEL (P34256) Hypothetical protein B0303.4	30	3.1
29	RPOE_STRP3 (P66720) Probable DNA-directed RNA polymerase delta s...	30	3.1
30	RPOE_STRP1 (P66719) Probable DNA-directed RNA polymerase delta s...	30	3.1
31	MYT1L_RAT (P70475) Myelin transcription factor 1-like protein (M...	30	3.1
32	UBF1A_XENLA (P25979) Nucleolar transcription factor 1-A (Upstrea...	30	4.0
33	NAB3_YEAST (P38996) Nuclear polyadenylated RNA-binding protein 3	30	4.0
34	UBF1_RAT (P25977) Nucleolar transcription factor 1 (Upstream-bin...	30	4.0
35	BFR2_NEUCR (Q7S6P8) Protein bfr-2	30	4.0
36	AN32E_HUMAN (Q9BTT0) Acidic leucine-rich nuclear phosphoprotein ...	30	4.0
37	KS1_HYDAT (P38978) KS1 protein precursor (Head-specific protein ...	30	4.0
38	UBP10_YEAST (P53874) Ubiquitin carboxyl-terminal hydrolase 10 (E...	29	5.2
39	CEC1_CAEEL (P34618) Chromo domain protein cec-1	29	5.2
40	KAR3_YEAST (P17119) Kinesin-like protein KAR3 (Nuclear fusion pr...	29	5.2
41	FKBP4_CRYNE (Q5KIJ5) FK506-binding protein 4 (EC 5.2.1.8) (Pepti...	29	5.2
42	AN32B_HUMAN (Q92688) Acidic leucine-rich nuclear phosphoprotein ...	29	6.8
43	EAF7_YEAST (P53911) Chromatin modification-related protein EAF7 ...	29	6.8
44	MYST3_HUMAN (Q92794) Histone acetyltransferase MYST3 (EC 2.3.1.4...	29	6.8
45	AN32A_MOUSE (O35381) Acidic leucine-rich nuclear phosphoprotein ...	29	6.8
46	BAZ2B_HUMAN (Q9UIF8) Bromodomain adjacent to zinc finger domain ...	29	6.8
47	AN32B_SHEEP (Q6A1I3) Acidic leucine-rich nuclear phosphoprotein ...	29	6.8
48	CENPB_SHEEP (P49451) Major centromere autoantigen B (Centromere ...	28	8.9
49	UBF1B_XENLA (P25980) Nucleolar transcription factor 1-B (Upstrea...	28	8.9
50	UBC2_CANAL (O74201) Ubiquitin-conjugating enzyme E2 2 (EC 6.3.2....	28	8.9
51	DAXX_HUMAN (Q9UER7) Death domain-associated protein 6 (Daxx) (hD...	28	8.9
52	MYT1L_MOUSE (P97500) Myelin transcription factor 1-like protein ...	28	8.9
53	UBF1_HUMAN (P17480) Nucleolar transcription factor 1 (Upstream-b...	28	8.9
54	TOM1_NEUCR (Q9P4Z1) E3 ubiquitin protein ligase TOM1-like protei...	28	8.9
55	MP62_LYTPI (P91753) Mitotic apparatus protein p62	28	8.9
56	ASF1_YEAST (P32447) Anti-silencing protein 1	28	8.9
57	MCM2_YEAST (P29469) DNA replication licensing factor MCM2 (Minic...	28	8.9
58	CCD82_HUMAN (Q8N4S0) Coiled-coil domain-containing protein 82	28	8.9
59	LTI78_ARATH (Q06738) Low-temperature-induced 78 kDa protein (Des...	28	8.9
60	AN32A_RAT (P49911) Acidic leucine-rich nuclear phosphoprotein 32...	28	8.9

>CHD1_YEAST (P32657) Chromo domain protein 1 (EC 3.6.1.-) (ATP-dependent|
           helicase CHD1)
          Length = 1468

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 21/63 (33%), Positives = 32/63 (50%)
 Frame = -2

Query: 222 YVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIGDVPINEDEIEFESDDDGVGRV 43
           Y +D  +E ++DN  + RR        + +EF  ++   D   +EDE +FE DDD  G  
Sbjct: 32  YFNDSDDEDDEDNIKQSRRKRMTTIEDDEDEFEDEEGEEDSGEDEDEEDFEEDDDYYGSP 91

Query: 42  INQ 34
           I Q
Sbjct: 92  IKQ 94

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>RPOE_STRR6 (P66718) Probable DNA-directed RNA polymerase delta subunit (RNAP|
           delta factor)
          Length = 200

 Score = 37.4 bits (85), Expect = 0.019
 Identities = 20/57 (35%), Positives = 29/57 (50%)
 Frame = -2

Query: 231 EDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIGDVPINEDEIEFESDD 61
           EDAY  D     +D+N  + +  +   +  E+ E   DD   DV +NED+ EF  DD
Sbjct: 139 EDAYEADPALSYDDENPDDEKNEVEAYDA-EINEIAPDDLGEDVDLNEDDDEFSDDD 194

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>RPOE_STRPN (P66717) Probable DNA-directed RNA polymerase delta subunit (RNAP|
           delta factor)
          Length = 200

 Score = 37.4 bits (85), Expect = 0.019
 Identities = 20/57 (35%), Positives = 29/57 (50%)
 Frame = -2

Query: 231 EDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIGDVPINEDEIEFESDD 61
           EDAY  D     +D+N  + +  +   +  E+ E   DD   DV +NED+ EF  DD
Sbjct: 139 EDAYEADPALSYDDENPDDEKNEVEAYDA-EINEIAPDDLGEDVDLNEDDDEFSDDD 194

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>RPOE_STRP6 (Q5XA09) Probable DNA-directed RNA polymerase delta subunit (RNAP|
           delta factor)
          Length = 191

 Score = 36.6 bits (83), Expect = 0.033
 Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
 Frame = -2

Query: 306 KRKK*SSSCYVLLGEDASTAQDWICEDAYVDDEMEETE-DDNAMEPRRSLRVRELHEVEE 130
           KRKK   + +V   EDA   +D   ED    +E  E E D+   +  +S       E+ E
Sbjct: 105 KRKKKRVNAFVDGDEDAIDYRDDDPEDEDFTEESAEVEYDEEDPDDEKSEVESYDSELNE 164

Query: 129 FVSDDEIGDVPINEDEIEFESDDDGV 52
            + +D+  +V INE++ E E D++ V
Sbjct: 165 IIPEDDFEEVDINEEDEEDEEDEEPV 190



 Score = 29.6 bits (65), Expect = 4.0
 Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
 Frame = -2

Query: 279 YVLLGEDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFV---SDDEI 109
           ++ LGE+    + W   D   ++ +   ED++  + R+  RV    + +E      DD+ 
Sbjct: 70  FIPLGENKWGLRSWYAIDEIDEEIITLEEDEDGAQKRKKKRVNAFVDGDEDAIDYRDDDP 129

Query: 108 GDVPINEDEIEFESDDD 58
            D    E+  E E D++
Sbjct: 130 EDEDFTEESAEVEYDEE 146

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>FKBP4_EMENI (P0C1B0) FK506-binding protein 4 (EC 5.2.1.8) (Peptidyl-prolyl|
           cis-trans isomerase) (PPIase) (Rotamase)
          Length = 478

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
 Frame = -2

Query: 213 DEMEETEDDNAMEPRRSLR-VRELHEVEEFVSDDEIGDVPINEDEIEFESDDD 58
           DE  E +DD++  PR +LR +R    ++E  SDD+  D    ED+ E +S+DD
Sbjct: 41  DEAPEFDDDSSRRPRATLRIIRAPPGLDEEDSDDDYED----EDDSEDDSEDD 89

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>GARP_PLAFF (P13816) Glutamic acid-rich protein precursor|
          Length = 678

 Score = 33.9 bits (76), Expect = 0.21
 Identities = 19/58 (32%), Positives = 27/58 (46%)
 Frame = -2

Query: 231 EDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIGDVPINEDEIEFESDDD 58
           E+   D+E EE E++   E        E  E EE   +DE  +    EDE + E D+D
Sbjct: 570 EEVEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEDEEDEDDAEEDEDDAEEDED 627



 Score = 31.2 bits (69), Expect = 1.4
 Identities = 19/58 (32%), Positives = 26/58 (44%)
 Frame = -2

Query: 231 EDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIGDVPINEDEIEFESDDD 58
           E+   ++E EE E++   E        E  E EE   D E  +    EDE + E DDD
Sbjct: 577 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEDEEDEDDAEEDEDDAEEDEDDAEEDDD 634

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>TNNT_DROME (P19351) Troponin T, skeletal muscle (Protein upheld) (Protein|
           intended thorax)
          Length = 397

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 19/61 (31%), Positives = 30/61 (49%)
 Frame = -2

Query: 264 EDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIGDVPINED 85
           EDA   +D + +D  V++E+ E ED+ A E        E  E EE   ++E  +    E+
Sbjct: 337 EDAKADEDIVEDDEEVEEEVVEEEDEEAEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 396

Query: 84  E 82
           E
Sbjct: 397 E 397

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>IE68_PRVKA (P24827) Immediate-early protein RSP40|
          Length = 364

 Score = 32.7 bits (73), Expect = 0.47
 Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
 Frame = -2

Query: 267 GEDASTAQDW-----ICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIGD 103
           G D + A ++     +CED   D E E+ E+D   E        E  E EE   +D   D
Sbjct: 191 GSDTTVASEFSFRGSVCED---DGEDEDEEEDGEEEDEDEEGEEEEDEEEEEGDEDGETD 247

Query: 102 VPINEDEIEFESDDD 58
           V   +DE E E D++
Sbjct: 248 VYEEDDEAEDEEDEE 262

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>PP4R2_KLULA (Q6CPD5) Serine/threonine-protein phosphatase 4 regulatory subunit|
           2 (PP4R2)
          Length = 402

 Score = 32.7 bits (73), Expect = 0.47
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = -2

Query: 231 EDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDD-EIGDVPINEDEIEFESD 64
           ED   +D  +E ED+   +    +   E  EVEE  SDD  IG++  N+D+    +D
Sbjct: 211 EDEDYEDHEDEEEDEEDEDNDSDVDEMEAEEVEEDASDDISIGEIAENDDQDNAHTD 267

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>TOM1_ASHGO (Q756G2) Probable E3 ubiquitin protein ligase TOM1 (EC 6.3.2.-)|
          Length = 3258

 Score = 32.3 bits (72), Expect = 0.62
 Identities = 18/66 (27%), Positives = 36/66 (54%)
 Frame = -2

Query: 231  EDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIGDVPINEDEIEFESDDDGV 52
            ED  V+D   + +D   M    +L + ++ +VE+   DDE   +  ++++I F  D+DG+
Sbjct: 1882 EDEDVEDVESDKDDVPDMFKNSALGMYDIEDVEDDHDDDENESLIGDDEDIAFVHDEDGL 1941

Query: 51   GRVINQ 34
              V ++
Sbjct: 1942 EVVFSE 1947

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>YNU6_YEAST (P40161) Hypothetical 51.6 kDa protein in SSB2-SPX18 intergenic|
           region
          Length = 455

 Score = 32.3 bits (72), Expect = 0.62
 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
 Frame = -2

Query: 264 EDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSL-----RVRELHEVEEFVSDDEIGDV 100
           ED   A+    ED   DDE E+ +  +A+    S      +  +  + +EF    E+ D+
Sbjct: 379 EDGEEAE----EDDEEDDEEEDKKGQSALNRDNSFASINGQPEQELQYKEFKEPLELEDI 434

Query: 99  PINEDEIEFESDDDGVG 49
           PI  D  + E D+DG G
Sbjct: 435 PIEIDNDDDEDDEDGSG 451

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>GNT1_GIBZE (Q4HVS2) Glucose N-acetyltransferase 1 (EC 2.4.1.-)|
           (N-acetylglucosaminyltransferase)
          Length = 431

 Score = 32.0 bits (71), Expect = 0.80
 Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 11/78 (14%)
 Frame = -2

Query: 261 DASTAQDWICEDAYVD--DEMEE--TEDDNAMEPRRSLRVRELHEVEE------FVSDDE 112
           D    ++W   DA VD  DE+ E  T D ++      L + E+ ++E       F  +DE
Sbjct: 40  DVPVPEEWRNHDAVVDEVDEITETLTHDPDSRPTPHKLTIAEIEDLENKGEFMGFEDEDE 99

Query: 111 IGDVPIN-EDEIEFESDD 61
           I DV IN +D+ ++E DD
Sbjct: 100 I-DVFINLDDDGDWEEDD 116

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>RS3_HALMA (P20281) 30S ribosomal protein S3P (HmaS3) (HS1)|
          Length = 304

 Score = 32.0 bits (71), Expect = 0.80
 Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
 Frame = -2

Query: 270 LGEDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEV------EEFVSDDEI 109
           L +D    +D   ED   D + E  E+    EP  S    EL E       ++  +D+E 
Sbjct: 189 LPDDFEIYEDVDVEDYVADTDGESVEELLEGEPEDSETAEELDEDVAAGADDDSEADEEF 248

Query: 108 GDVPINEDEIEFESDDD 58
            D  I E+++E  +DDD
Sbjct: 249 VDEEIVEEDVEVPTDDD 265

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>NUCL_RAT (P13383) Nucleolin (Protein C23)|
          Length = 712

 Score = 32.0 bits (71), Expect = 0.80
 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 12/70 (17%)
 Frame = -2

Query: 231 EDAYVDDEMEETEDDNAME------------PRRSLRVRELHEVEEFVSDDEIGDVPINE 88
           ED   DDE EE EDD+  E            P + + V+     EE   D++  D   +E
Sbjct: 197 EDDDDDDEEEEEEDDSEEEVMEITPAKGKKTPAKVVPVKAKSVAEEEEDDEDDEDEEEDE 256

Query: 87  DEIEFESDDD 58
           DE + E D+D
Sbjct: 257 DEEDEEDDED 266

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>RPOE_STRP8 (Q8NZF7) Probable DNA-directed RNA polymerase delta subunit (RNAP|
           delta factor)
          Length = 191

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
 Frame = -2

Query: 279 YVLLGEDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFV---SDDEI 109
           ++ LGE+    + W   D   ++ +   ED++  + R+  RV    + +E      DD+ 
Sbjct: 70  FIPLGENKWGLRSWYAIDEIDEEIITLEEDEDGAQKRKKKRVNAFMDGDEDAIDYRDDDP 129

Query: 108 GDVPINEDEIEFESDDD 58
            D    E+  E E D+D
Sbjct: 130 EDEDFTEESAEVEYDED 146

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>SPT5_YEAST (P27692) Transcription elongation factor SPT5 (Chromatin elongation|
           factor SPT5)
          Length = 1063

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 19/51 (37%), Positives = 27/51 (52%)
 Frame = -2

Query: 216 DDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIGDVPINEDEIEFESD 64
           DD+ +E +DD A   RR        ++E  VSDDE      +EDE E +S+
Sbjct: 157 DDDDDEDDDDEAPTKRRRQERNRFLDIEAEVSDDE------DEDEDEEDSE 201

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>CLF1_DEBHA (Q6BSP7) Pre-mRNA-splicing factor CLF1|
          Length = 714

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
 Frame = -2

Query: 228 DAYVDDEMEETEDDNAMEPR-RSLRVRELHEVEEFVSDDEIGDVPINEDEIE 76
           DAY++DE    E DNA E   R +++    E+     D E+ DVPI+ ++++
Sbjct: 174 DAYINDEKRYDEYDNAREIYIRYVQIHSSGEIWLKWIDFEMNDVPIDPEQVK 225

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>DBP10_DEBHA (Q6BL34) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)|
          Length = 932

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 19/71 (26%), Positives = 33/71 (46%)
 Frame = -2

Query: 273 LLGEDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIGDVPI 94
           L G D+    D   ++  V DE+   EDD   +P +  ++ +    + F S      + +
Sbjct: 15  LAGSDSEPESDLNSDNEEVQDEIVSDEDDTKHKPNKKQKLEKGKSKQTFPS------LEL 68

Query: 93  NEDEIEFESDD 61
           ++DE E ES D
Sbjct: 69  SDDEAENESKD 79

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>SPRC_HUMAN (P09486) SPARC precursor (Secreted protein acidic and rich in|
           cysteine) (Osteonectin) (ON) (Basement-membrane protein
           40) (BM-40)
          Length = 303

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = -2

Query: 204 EETEDDNAMEPRRSLRVRELHEVEEFVSDDEIGDVPINEDEIEFESD 64
           E  ED+N +  ++ LRV+++HE E+ +   E GD P+     +FE +
Sbjct: 180 ERDEDNNLLTEKQKLRVKKIHENEKRL---EAGDHPVELLARDFEKN 223

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>YNL4_SCHPO (Q9P6S3) Hypothetical protein C27.04 in chromosome II|
          Length = 1052

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 15/52 (28%), Positives = 31/52 (59%)
 Frame = -2

Query: 231  EDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIGDVPINEDEIE 76
            E++ + DE+EET  D+ +E      ++E+ E E   + +E  ++P N+ E++
Sbjct: 908  ENSILQDEVEETRQDD-IEKDELEDIKEVKEDENLTTLEETIEIPANDIEVQ 958

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>FKBP3_YARLI (Q6C4C9) FK506-binding protein 3 (EC 5.2.1.8) (Peptidyl-prolyl|
           cis-trans isomerase) (PPIase) (Rotamase)
          Length = 407

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
 Frame = -2

Query: 231 EDAYVDDEMEETEDDNAMEPRRSLRVRE--LHEVEEFVSDDEIGDVPINEDEIEFESDDD 58
           ED   DDE +E   ++  + ++ +   E  L EVE    DDE  D    +DE+EFE DD+
Sbjct: 75  EDEDDDDEDDEVSAEDMAQIKKLIAANEDGLDEVEG-GDDDEDDD---EDDEMEFEEDDE 130

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>UPL2_ARATH (Q8H0T4) E3 ubiquitin protein ligase UPL2 (EC 6.3.2.-)|
            (Ubiquitin-protein ligase 2)
          Length = 3658

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 21/78 (26%), Positives = 34/78 (43%)
 Frame = -2

Query: 273  LLGEDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIGDVPI 94
            + G D    +D    D Y DD ++E E+D            E    ++ V +DE  +   
Sbjct: 2152 IAGTDVEDPEDTGLGDEYNDDMVDEDEED------------EDEYNDDMVDEDEDDEDEY 2199

Query: 93   NEDEIEFESDDDGVGRVI 40
            N+D ++ + DD    RVI
Sbjct: 2200 NDDMVDEDEDDFHETRVI 2217

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>NOG2_NEUCR (Q7SHR8) Nucleolar GTP-binding protein 2|
          Length = 619

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = -2

Query: 267 GEDASTAQDWICEDAYVDDE---MEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIGDVP 97
           GE+ STA+D I  DA  D+E    EE  D    E    L +    E+EE  S+ E    P
Sbjct: 550 GEEKSTAEDMIPLDASSDEEEDGEEEGSDVEDDEEGSDLDIEGASELEESESEAEAAPAP 609

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>GCY31_CAEEL (Q86C56) Soluble guanylate cyclase gcy-31 (EC 4.6.1.2)|
          Length = 702

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = -2

Query: 234 CEDAYVDDEMEETEDDNAMEPRRSLRVRELHEV-EEFVSDDEIGDVPINEDEIEFES 67
           CE    D + E+ +DD  + PR+S R     E  EE     ++   P+++  IE  S
Sbjct: 626 CESRQDDSQTEDDDDDELLLPRKSGRKSPTSEAEEELKKKGQLSFTPVSDAGIECHS 682

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>TNNT_PERAM (Q9XZ71) Troponin T (TnT)|
          Length = 384

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 20/70 (28%), Positives = 34/70 (48%)
 Frame = -2

Query: 267 GEDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIGDVPINE 88
           G+  S  ++ +  DA VDDE+EE   +   EP          E EE  +++E  +    E
Sbjct: 325 GDPESPEEEEVKADAGVDDELEEPTFEPEPEP----------EPEEEAAEEEAEEEEEEE 374

Query: 87  DEIEFESDDD 58
           +E E E +++
Sbjct: 375 EEEEEEEEEE 384

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>AN32E_MOUSE (P97822) Acidic leucine-rich nuclear phosphoprotein 32 family|
           member E (LANP-like protein) (LANP-L) (Cerebellar
           postnatal development protein 1)
          Length = 260

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
 Frame = -2

Query: 213 DEMEETEDDNAMEPRRSLRVRELHEVEEFVSD-----DEIGDVPINEDEIEFESDDD 58
           DE EE ED++   P       E  + +E  S+     +E+G   + +DEI+ E DDD
Sbjct: 169 DEDEEDEDEDEAGPPEGYEEEEDDDEDEAGSEVGEGEEEVGLSYLMKDEIQDEEDDD 225

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>AGL8_ARATH (Q38876) Agamous-like MADS-box protein AGL8 (Floral homeotic|
           protein AGL8) (Transcription factor FRUITFULL)
          Length = 242

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
 Frame = -2

Query: 318 RMLDKRKK*SSSCYVLLGEDASTAQDWICEDAYVDDEMEETEDD--NAM-EPRRSLRVRE 148
           R+L++  +   S   L+G D S +++W+ E A +   +E  E +  N M E   SL ++E
Sbjct: 65  RILERYDRYLYSDKQLVGRDVSQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDSLSLKE 124

Query: 147 LHEVEEFVSDDEIGDVPINEDEIEFES 67
           L  +E  + D  I  +   +++  FES
Sbjct: 125 LQSLEHQL-DAAIKSIRSRKNQAMFES 150

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>YKA4_CAEEL (P34256) Hypothetical protein B0303.4|
          Length = 616

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
 Frame = -2

Query: 237 ICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIGDV------PINE-DEI 79
           + ED  +D + E+ E+D+  +      + + HE EE   DDE  ++      PI E +++
Sbjct: 243 LTEDIVIDQQEEDDEEDDDDDSSDDAIIED-HEEEEGQDDDEETEIEIDRGGPIEEIEQV 301

Query: 78  EFESDDD 58
           E E ++D
Sbjct: 302 EVEQNED 308

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>RPOE_STRP3 (P66720) Probable DNA-directed RNA polymerase delta subunit (RNAP|
           delta factor)
          Length = 191

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
 Frame = -2

Query: 279 YVLLGEDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFV---SDDEI 109
           ++ LGE+    + W   D   ++ +   ED++  + R+  RV    + +E      DD+ 
Sbjct: 70  FIPLGENKWGLRSWYAIDEIDEEIITLEEDEDGAQKRKKKRVNAFMDGDEDAIDYRDDDP 129

Query: 108 GDVPINEDEIEFESDDD 58
            D    E+  E E D++
Sbjct: 130 EDEDFTEESAEVEYDEE 146

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>RPOE_STRP1 (P66719) Probable DNA-directed RNA polymerase delta subunit (RNAP|
           delta factor)
          Length = 191

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
 Frame = -2

Query: 279 YVLLGEDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFV---SDDEI 109
           ++ LGE+    + W   D   ++ +   ED++  + R+  RV    + +E      DD+ 
Sbjct: 70  FIPLGENKWGLRSWYAIDEIDEEIITLEEDEDGAQKRKKKRVNAFMDGDEDAIDYRDDDP 129

Query: 108 GDVPINEDEIEFESDDD 58
            D    E+  E E D++
Sbjct: 130 EDEDFTEESAEVEYDEE 146

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>MYT1L_RAT (P70475) Myelin transcription factor 1-like protein (MyT1L protein)|
           (Neural zinc finger factor 1) (NZF-1)
          Length = 1187

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 21/75 (28%), Positives = 37/75 (49%)
 Frame = -2

Query: 282 CYVLLGEDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIGD 103
           CY   G +    ++   ++ + +D  E+ +DD+  E  R     +  E+EE   DDE  +
Sbjct: 90  CYESDGTEDMDDKEEDDDEEFSEDNDEQGDDDDEDEVDR----EDEEEIEE--EDDEDDE 143

Query: 102 VPINEDEIEFESDDD 58
              + D++E E DDD
Sbjct: 144 DDDDGDDVEEEEDDD 158

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>UBF1A_XENLA (P25979) Nucleolar transcription factor 1-A (Upstream binding|
           factor 1-A) (UBF-1-A) (xUBF-1)
          Length = 677

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 21/58 (36%), Positives = 29/58 (50%)
 Frame = -2

Query: 231 EDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIGDVPINEDEIEFESDDD 58
           +D   DD+ +E EDD+  E        E  +  E  SD++  D   NEDE E E D+D
Sbjct: 593 DDDDEDDDDDEDEDDDDDEDEDKEDSSEDGDSSESSSDEDSEDGEENEDE-EGEEDED 649

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>NAB3_YEAST (P38996) Nuclear polyadenylated RNA-binding protein 3|
          Length = 802

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = -2

Query: 219 VDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIGDVPINEDEIEFESDDD 58
           V+DE EE +++   E    +   E  E E         D   NE+E E E DDD
Sbjct: 65  VNDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDDDDDNEEEEEEEEDDD 118

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>UBF1_RAT (P25977) Nucleolar transcription factor 1 (Upstream-binding factor|
           1) (UBF-1)
          Length = 764

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 20/58 (34%), Positives = 28/58 (48%)
 Frame = -2

Query: 231 EDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIGDVPINEDEIEFESDDD 58
           ED   DDE EE +D+N           +  +  E  S+DE  D   NED+ + E DD+
Sbjct: 684 EDDDDDDEEEEEDDENGDSS------EDGGDSSESSSEDESEDGDENEDDDDDEDDDE 735

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>BFR2_NEUCR (Q7S6P8) Protein bfr-2|
          Length = 636

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
 Frame = -2

Query: 231 EDAYVDDEMEETEDDNAMEPRRSL-------RVRELHEVEEFVSDDEIGDVPINEDEIEF 73
           ++   D E EETEDD   +    L          E  + EE   DDE G    +EDE + 
Sbjct: 223 QNGLFDMEAEETEDDEGEDDEEELDGALLSGSDDEEGDSEEDDEDDEEGSGDEDEDEDDE 282

Query: 72  ESDDD 58
           + D+D
Sbjct: 283 DEDED 287

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>AN32E_HUMAN (Q9BTT0) Acidic leucine-rich nuclear phosphoprotein 32 family|
           member E (LANP-like protein) (LANP-L)
          Length = 268

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 19/57 (33%), Positives = 29/57 (50%)
 Frame = -2

Query: 228 DAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIGDVPINEDEIEFESDDD 58
           + Y ++E EE E+D   +        EL E EE     E+G   + ++EI+ E DDD
Sbjct: 182 EGYEEEEEEEEEEDEDEDEDEDEAGSELGEGEE-----EVGLSYLMKEEIQDEEDDD 233

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>KS1_HYDAT (P38978) KS1 protein precursor (Head-specific protein 1)|
           (Kopf-spezifisches protein 1)
          Length = 217

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 19/109 (17%)
 Frame = -2

Query: 330 QFNGRMLDKRKK*SSSCYVLLGEDASTAQDWI-----------CEDAYVDDEMEETEDDN 184
           QF    ++K+K+       +  +D    +D +           C D    +E +E +DD 
Sbjct: 34  QFAETKVEKKKRSDDGDEEICDDDDEDCEDVVDIEECNEDDDDCVDGGETEECDEDDDDC 93

Query: 183 AMEPRRSLRV--------RELHEVEEFVSDDEIGDVPINEDEIEFESDD 61
             E ++  R          +  E EE   DDE  +V ++ +E + E DD
Sbjct: 94  QEEKKKKKRETKPKLKKRNDDEEEEECEEDDEDCEVEVDIEECDEEDDD 142

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>UBP10_YEAST (P53874) Ubiquitin carboxyl-terminal hydrolase 10 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 10)
           (Ubiquitin-specific-processing protease 10)
           (Deubiquitinating enzyme 10) (Disrupter of telomere
           silencing protein 4)
          Length = 792

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = -2

Query: 216 DDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIGD 103
           DDE+E+ ED++ M+   S   +EL E EE  S  +I +
Sbjct: 227 DDEIEDDEDEDDMDYDSSAMEKELPEEEENDSSSKISE 264

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>CEC1_CAEEL (P34618) Chromo domain protein cec-1|
          Length = 304

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 19/64 (29%), Positives = 31/64 (48%)
 Frame = -2

Query: 267 GEDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIGDVPINE 88
           GED   +Q+   ED   D++MEE E +   + +      E  E EE V + +  +    E
Sbjct: 173 GEDEEESQE--VEDLKEDEKMEEDEKEEEEDVQLESEKNEKEEEEEKVEEKKEEEEEEEE 230

Query: 87  DEIE 76
           +EI+
Sbjct: 231 EEIQ 234

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>KAR3_YEAST (P17119) Kinesin-like protein KAR3 (Nuclear fusion protein)|
          Length = 729

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = -2

Query: 216 DDEMEETEDDNAMEPRRSLRVRE-LHEVEEFVSDDEIGDVPINEDEIEFES 67
           ++E     D+ A++ + +L   E + E+EE++ D E+G   +NE  I+ E+
Sbjct: 321 EEETTRLRDEVALKQKTNLETLEKIKELEEYIKDTELGMKELNEILIKEET 371

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>FKBP4_CRYNE (Q5KIJ5) FK506-binding protein 4 (EC 5.2.1.8) (Peptidyl-prolyl|
           cis-trans isomerase) (PPIase) (Rotamase)
          Length = 405

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
 Frame = -2

Query: 243 DWICEDAYVDDEMEETEDDNAMEPR--RSLRVRELHEVEEFVSDDEIGDVPINEDEIE 76
           +W  ED   D+E+   EDD  ME    +  + ++  +VEE  S++E  D    EDE+E
Sbjct: 63  EWSDEDE--DEEILSEEDDGEMEVEEVKQKKGKKAEKVEEEDSEEEDEDESDFEDELE 118

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>AN32B_HUMAN (Q92688) Acidic leucine-rich nuclear phosphoprotein 32 family|
           member B (PHAPI2 protein) (Silver-stainable protein
           SSP29) (Acidic protein rich in leucines)
          Length = 251

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 23/71 (32%), Positives = 32/71 (45%)
 Frame = -2

Query: 267 GEDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIGDVPINE 88
           GED     D   E+   D+E +E ED    E    +      E EEF  D+E      +E
Sbjct: 174 GEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVS----EEEEEFGLDEE------DE 223

Query: 87  DEIEFESDDDG 55
           DE E E +++G
Sbjct: 224 DEDEDEEEEEG 234

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>EAF7_YEAST (P53911) Chromatin modification-related protein EAF7|
           (ESA1-associated factor 7)
          Length = 425

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 18/58 (31%), Positives = 31/58 (53%)
 Frame = -2

Query: 231 EDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIGDVPINEDEIEFESDDD 58
           E  + D+E EE E+DN  +  +  +  E+ E +  ++ +E  D   NE+E   E DD+
Sbjct: 252 EVKFEDEEKEEIEEDNTKDEEQKEKKEEIQEPK--ITHNEEVDKEKNENE---EGDDE 304

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>MYST3_HUMAN (Q92794) Histone acetyltransferase MYST3 (EC 2.3.1.48) (EC 2.3.1.-)|
            (MYST protein 3) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein
            3) (Runt-related transcription factor-binding protein 2)
            (Monocytic leukemia zinc finger protein) (Zinc finger
            protei
          Length = 2004

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = -2

Query: 231  EDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIGDVPINEDEIEFESDD 61
            E  +  DE EE ED+N + PR   R     +V    S  +       EDE   ++DD
Sbjct: 1062 EPTFEIDEEEEEEDENELFPREYFRRLSSQDVLRCQSSSKRKSKDEEEDEESDDADD 1118

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>AN32A_MOUSE (O35381) Acidic leucine-rich nuclear phosphoprotein 32 family|
           member A (Potent heat-stable protein phosphatase 2A
           inhibitor I1PP2A) (Acidic nuclear phosphoprotein pp32)
           (Cerebellar leucine-rich acidic nuclear protein)
          Length = 247

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 7/67 (10%)
 Frame = -2

Query: 228 DAYVDDEMEETEDD-------NAMEPRRSLRVRELHEVEEFVSDDEIGDVPINEDEIEFE 70
           + YV+D+ EE ED+         +E        E  E E+   ++E  +   N+ E++ E
Sbjct: 161 EGYVEDDDEEDEDEEEYDEYAQLVEDEEEEDEEEEGEEEDVSGEEEEDEEGYNDGEVDDE 220

Query: 69  SDDDGVG 49
            D++  G
Sbjct: 221 EDEEEAG 227

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>BAZ2B_HUMAN (Q9UIF8) Bromodomain adjacent to zinc finger domain 2B (hWALp4)|
          Length = 1972

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 17/68 (25%), Positives = 31/68 (45%)
 Frame = -2

Query: 231 EDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIGDVPINEDEIEFESDDDGV 52
           ED   DDE E+ EDD   E   S    + +   +    +E  D   ++DE + +++ +  
Sbjct: 413 EDEEEDDEEEDEEDDEDDESDDSQSESDSNSESDTEGSEEEDDDDKDQDESDSDTEGEKT 472

Query: 51  GRVINQXT 28
              +N+ T
Sbjct: 473 SMKLNKTT 480

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>AN32B_SHEEP (Q6A1I3) Acidic leucine-rich nuclear phosphoprotein 32 family|
           member B (Leucine-rich acidic nuclear protein) (LAN)
           (Acidic protein rich in leucines)
          Length = 261

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
 Frame = -2

Query: 267 GEDASTAQDWICEDAYVDDEMEETEDDNAM----EPRRSLRVRELHEVEEFVSDDEIGDV 100
           GE+    +D   E+   DDE ++ ED++      E + S    E     E   DDE  D 
Sbjct: 174 GENEDKEEDEDGEEEEFDDEEDDDEDEDVEGEEDEDKVSGEEEEFGHDGEADEDDEDEDE 233

Query: 99  PINEDEIEFESDDDGVGR 46
             +EDE E ES   G GR
Sbjct: 234 DEDEDEEEEES-GKGEGR 250

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>CENPB_SHEEP (P49451) Major centromere autoantigen B (Centromere protein B)|
           (CENP-B) (Fragment)
          Length = 239

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 20/61 (32%), Positives = 29/61 (47%)
 Frame = -2

Query: 231 EDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIGDVPINEDEIEFESDDDGV 52
           E+   + E EE E+++  E   +    EL E EE    +E GDV   E+E E E +    
Sbjct: 55  EEEEEEGEGEEEEEEDGEEEEEAGEGEELGEEEEV---EEEGDVDTVEEEEEEEEESSSE 111

Query: 51  G 49
           G
Sbjct: 112 G 112

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>UBF1B_XENLA (P25980) Nucleolar transcription factor 1-B (Upstream binding|
           factor 1-B) (UBF-1-B) (xUBF-2)
          Length = 701

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 18/53 (33%), Positives = 28/53 (52%)
 Frame = -2

Query: 216 DDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIGDVPINEDEIEFESDDD 58
           DDE EE +DD+  E +      E  +  +  SD++  +   NEDE + E DD+
Sbjct: 622 DDEDEEDDDDDDDEDKEDSS--EDGDSSDSSSDEDSEEGEENEDEEDEEDDDE 672

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>UBC2_CANAL (O74201) Ubiquitin-conjugating enzyme E2 2 (EC 6.3.2.19)|
           (Ubiquitin-protein ligase UBC2) (Ubiquitin carrier
           protein UBC2) (Radiation sensitivity protein 6)
          Length = 179

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = -2

Query: 195 EDDNAMEPRRSLRVRELHEVEE--FVSDDEIGDVPINEDEIEFESDDD 58
           E  N  +  RSL V+ + E  E  +  DD+  +   +EDE E E DDD
Sbjct: 125 EAANLYKDHRSLYVKRVRETVENSWNDDDDEEEEEEDEDEAEDEDDDD 172

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>DAXX_HUMAN (Q9UER7) Death domain-associated protein 6 (Daxx) (hDaxx) (Fas|
           death domain-associated protein) (ETS1-associated
           protein 1) (EAP1)
          Length = 740

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 21/67 (31%), Positives = 31/67 (46%)
 Frame = -2

Query: 258 ASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIGDVPINEDEI 79
           AS A+    +D   D+E EE E++   E   S    +L +++E   DDE  D    E+E 
Sbjct: 430 ASRAETDDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEED---EEEEA 486

Query: 78  EFESDDD 58
               D D
Sbjct: 487 AAGKDGD 493

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>MYT1L_MOUSE (P97500) Myelin transcription factor 1-like protein (MyT1L protein)|
           (Postmitotic neural gene 1 protein) (Zinc finger protein
           Png-1) (Neural zinc finger factor 1) (NZF-1)
          Length = 1187

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 19/75 (25%), Positives = 35/75 (46%)
 Frame = -2

Query: 282 CYVLLGEDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIGD 103
           CY   G +    ++   ++ + +D  E+ +DD+  E  R        E +E   DDE GD
Sbjct: 90  CYESDGTEDMDDKEEDDDEEFSEDNDEQGDDDDEDEVDREDEEEIEEEDDEDDDDDEDGD 149

Query: 102 VPINEDEIEFESDDD 58
               E+E + E +++
Sbjct: 150 DVEEEEEDDDEEEEE 164

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>UBF1_HUMAN (P17480) Nucleolar transcription factor 1 (Upstream-binding factor|
           1) (UBF-1) (Autoantigen NOR-90)
          Length = 764

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = -2

Query: 216 DDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIGDVPINEDEIEFESDDD 58
           +DE +E ED+   +        +  +  E  S+DE  D   NE++ E E DD+
Sbjct: 683 EDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDE 735

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>TOM1_NEUCR (Q9P4Z1) E3 ubiquitin protein ligase TOM1-like protein (EC 6.3.2.-)|
          Length = 4065

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 18/50 (36%), Positives = 23/50 (46%)
 Frame = -2

Query: 207  MEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIGDVPINEDEIEFESDDD 58
            ME   DD   EP R            ++ DDE G+   +EDE E + DDD
Sbjct: 2577 MENAGDDLDAEPIRDFD-------GHYIDDDEDGEEDDDEDEGEDDMDDD 2619

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>MP62_LYTPI (P91753) Mitotic apparatus protein p62|
          Length = 411

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
 Frame = -2

Query: 231 EDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFV---SDDEIGDVPINEDEIEFESDD 61
           ED  V DE EE E  +  E        E  + EE      DDE  D   +EDE   + +D
Sbjct: 255 EDYKVGDEEEEEEATSGEEEEEDEEEEEEEDDEEMALGDDDDEDDDEEDDEDEEGMDDED 314

Query: 60  D 58
           +
Sbjct: 315 E 315

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>ASF1_YEAST (P32447) Anti-silencing protein 1|
          Length = 279

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 21/69 (30%), Positives = 29/69 (42%)
 Frame = -2

Query: 267 GEDASTAQDWICEDAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIGDVPINE 88
           G D    +D   ED   DDE +E +D    E        E  E EE   D+E     + E
Sbjct: 168 GVDDEEEEDDEEEDDDEDDEDDEDDDQEDGEGEAEEAAEEEEEEEEKTEDNETN---LEE 224

Query: 87  DEIEFESDD 61
           +E + E+ D
Sbjct: 225 EEEDIENSD 233

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>MCM2_YEAST (P29469) DNA replication licensing factor MCM2 (Minichromosome|
           maintenance protein 2)
          Length = 868

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
 Frame = -2

Query: 225 AYVDDEMEETE-----DDNAMEPRRSLRVRELHEVEEFVSDDEIGDVPIN--EDEIEFES 67
           AY+DDE EE E     D+  +  +R  R R+  ++E    DD + D+ I+   +E+  ES
Sbjct: 127 AYIDDEDEEQEGAAQLDEMGLPVQRRRRRRQYEDLEN-SDDDLLSDMDIDPLREELTLES 185

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>CCD82_HUMAN (Q8N4S0) Coiled-coil domain-containing protein 82|
          Length = 544

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 18/58 (31%), Positives = 30/58 (51%)
 Frame = -2

Query: 210 EMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIGDVPINEDEIEFESDDDGVGRVIN 37
           +++E     + + R S R  E  E E   S DE+ +    E+E  +ESD+DG   +I+
Sbjct: 242 KLKELSKQRSRQRRSSGRDFEDSEKESCPSSDEVDE---EEEEDNYESDEDGDDYIID 296

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>LTI78_ARATH (Q06738) Low-temperature-induced 78 kDa protein|
           (Desiccation-responsive protein 29A)
          Length = 710

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 12/61 (19%)
 Frame = -2

Query: 213 DEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIGD------------VPINEDEIEFE 70
           D+ EET D+   EP++S    +   +  +  +  +GD             P+NE + E E
Sbjct: 488 DDFEETRDEKTEEPKQSTYTEKFASMLGYSGEIPVGDQTQVAGTVDEKLTPVNEKDQETE 547

Query: 69  S 67
           S
Sbjct: 548 S 548

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>AN32A_RAT (P49911) Acidic leucine-rich nuclear phosphoprotein 32 family|
           member A (Leucine-rich acidic nuclear protein)
          Length = 247

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 21/58 (36%), Positives = 30/58 (51%)
 Frame = -2

Query: 228 DAYVDDEMEETEDDNAMEPRRSLRVRELHEVEEFVSDDEIGDVPINEDEIEFESDDDG 55
           + YV+D+ EE ED+   +    L   E  E EE   ++E  DV   E+E E E  +DG
Sbjct: 161 EGYVEDDDEEDEDEEEYDEYAQLVEDEEEEDEEEEGEEE--DVSGEEEEDE-EGYNDG 215


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,752,997
Number of Sequences: 219361
Number of extensions: 835353
Number of successful extensions: 3483
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 3076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3401
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3014947676
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result