>gb|AY112156.1| Zea mays CL1582_10 mRNA sequence
          Length = 891

 Score =  149 bits (75), Expect = 8e-33
 Identities = 204/247 (82%)
 Strand = Plus / Plus

                                                                       
Query: 165 ctaagacacatacagtggttcgggcgcagttttcctctgtatccagttatccttggacca 224
           |||||||||||| || ||||| || || |||||||| ||||||||||| || | ||||||
Sbjct: 327 ctaagacacatagagcggttcaggggccgttttcctttgtatccagttgtcttcggacca 386

                                                                       
Query: 225 tttacatccttccatgtcaactacatgcaagctcagtgcatgtcttgagactggagaaag 284
           ||||||||||||  | || |||||||| ||||| | ||||||||||||  | ||||||||
Sbjct: 387 tttacatccttcagtatccactacatgtaagctgaatgcatgtcttgacgcaggagaaag 446

                                                                       
Query: 285 gttctcgaagctctgatgtacaagatcaccatgaataacaacaaagtcacctgatttcat 344
            ||||| || |||||||||| |||||| ||||| ||||| || ||  |||| ||||| | 
Sbjct: 447 attctcaaaactctgatgtataagatctccatggataaccaccaaagcaccagattttac 506

                                                                       
Query: 345 ttccagtggtacaaactctttctgatcataaagcggggagggacgatcaaaatgagtgcc 404
           |||||| |||||||| |||||||| |||||    |||||||| | ||||||||| || ||
Sbjct: 507 ttccagcggtacaaattctttctggtcataggctggggaggggcaatcaaaatgtgtacc 566

                  
Query: 405 attttca 411
           |||||||
Sbjct: 567 attttca 573

>dbj|AK064856.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000H11, full
            insert sequence
          Length = 1588

 Score =  123 bits (62), Expect = 5e-25
 Identities = 179/218 (82%)
 Strand = Plus / Minus

                                                                        
Query: 194  ttttcctctgtatccagttatccttggaccatttacatccttccatgtcaactacatgca 253
            ||||||| |||| |||||| |  |||||||||| |||||||||  | |||| |||||| |
Sbjct: 1425 ttttcctttgtaaccagttttgtttggaccattcacatccttcggtatcaattacatgta 1366

                                                                        
Query: 254  agctcagtgcatgtcttgagactggagaaaggttctcgaagctctgatgtacaagatcac 313
            ||||||||||||||||||| ||  ||||||| || || |||||||| ||||||||||| |
Sbjct: 1365 agctcagtgcatgtcttgacaccagagaaagattttcaaagctctggtgtacaagatctc 1306

                                                                        
Query: 314  catgaataacaacaaagtcacctgatttcatttccagtggtacaaactctttctgatcat 373
            |||||||||| || || |||||||| || | ||| | ||| ||||| |||||| ||||||
Sbjct: 1305 catgaataaccaccaaatcacctgactttacttctaatggcacaaattctttcagatcat 1246

                                                  
Query: 374  aaagcggggagggacgatcaaaatgagtgccattttca 411
            |    || || ||| |||||||||||||  ||||||||
Sbjct: 1245 aggttggcgaaggatgatcaaaatgagtatcattttca 1208

>ref|XM_469483.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1102

 Score =  121 bits (61), Expect = 2e-24
 Identities = 124/145 (85%)
 Strand = Plus / Minus

                                                                       
Query: 194 ttttcctctgtatccagttatccttggaccatttacatccttccatgtcaactacatgca 253
           ||||||| |||| |||||| | ||||||||||| |||||||||  | |||| |||||| |
Sbjct: 869 ttttcctttgtaaccagttttgcttggaccattcacatccttcggtatcaattacatgta 810

                                                                       
Query: 254 agctcagtgcatgtcttgagactggagaaaggttctcgaagctctgatgtacaagatcac 313
           ||||||||||||||||||| || |||||||| || || |||||||| |||| |||||| |
Sbjct: 809 agctcagtgcatgtcttgacaccggagaaagattttcaaagctctggtgtataagatctc 750

                                    
Query: 314 catgaataacaacaaagtcacctga 338
           |||||||||| || || ||||||||
Sbjct: 749 catgaataaccaccaaatcacctga 725

>dbj|AK104750.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-F05, full
           insert sequence
          Length = 1089

 Score =  121 bits (61), Expect = 2e-24
 Identities = 124/145 (85%)
 Strand = Plus / Minus

                                                                       
Query: 194 ttttcctctgtatccagttatccttggaccatttacatccttccatgtcaactacatgca 253
           ||||||| |||| |||||| | ||||||||||| |||||||||  | |||| |||||| |
Sbjct: 851 ttttcctttgtaaccagttttgcttggaccattcacatccttcggtatcaattacatgta 792

                                                                       
Query: 254 agctcagtgcatgtcttgagactggagaaaggttctcgaagctctgatgtacaagatcac 313
           ||||||||||||||||||| || |||||||| || || |||||||| |||| |||||| |
Sbjct: 791 agctcagtgcatgtcttgacaccggagaaagattttcaaagctctggtgtataagatctc 732

                                    
Query: 314 catgaataacaacaaagtcacctga 338
           |||||||||| || || ||||||||
Sbjct: 731 catgaataaccaccaaatcacctga 707

>dbj|AK103821.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147H12, full
           insert sequence
          Length = 1230

 Score =  121 bits (61), Expect = 2e-24
 Identities = 124/145 (85%)
 Strand = Plus / Minus

                                                                       
Query: 194 ttttcctctgtatccagttatccttggaccatttacatccttccatgtcaactacatgca 253
           ||||||| |||| |||||| | ||||||||||| |||||||||  | |||| |||||| |
Sbjct: 882 ttttcctttgtaaccagttttgcttggaccattcacatccttcggtatcaattacatgta 823

                                                                       
Query: 254 agctcagtgcatgtcttgagactggagaaaggttctcgaagctctgatgtacaagatcac 313
           ||||||||||||||||||| || |||||||| || || |||||||| |||| |||||| |
Sbjct: 822 agctcagtgcatgtcttgacaccggagaaagattttcaaagctctggtgtataagatctc 763

                                    
Query: 314 catgaataacaacaaagtcacctga 338
           |||||||||| || || ||||||||
Sbjct: 762 catgaataaccaccaaatcacctga 738

>dbj|AK060138.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-E10, full
           insert sequence
          Length = 1089

 Score =  121 bits (61), Expect = 2e-24
 Identities = 124/145 (85%)
 Strand = Plus / Minus

                                                                       
Query: 194 ttttcctctgtatccagttatccttggaccatttacatccttccatgtcaactacatgca 253
           ||||||| |||| |||||| | ||||||||||| |||||||||  | |||| |||||| |
Sbjct: 851 ttttcctttgtaaccagttttgcttggaccattcacatccttcggtatcaattacatgta 792

                                                                       
Query: 254 agctcagtgcatgtcttgagactggagaaaggttctcgaagctctgatgtacaagatcac 313
           ||||||||||||||||||| || |||||||| || || |||||||| |||| |||||| |
Sbjct: 791 agctcagtgcatgtcttgacaccggagaaagattttcaaagctctggtgtataagatctc 732

                                    
Query: 314 catgaataacaacaaagtcacctga 338
           |||||||||| || || ||||||||
Sbjct: 731 catgaataaccaccaaatcacctga 707

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                            
Query: 207      ccagttatccttggaccatttacatccttccatgtcaactacatgcaagctcagtgcatg 266
                |||||| | ||||||||||| |||||||||  | |||| |||||| ||||||||||||||
Sbjct: 28258146 ccagttttgcttggaccattcacatccttcggtatcaattacatgtaagctcagtgcatg 28258205

                                  
Query: 267      tcttgagactggagaaag 284
                |||||| || ||||||||
Sbjct: 28258206 tcttgacaccggagaaag 28258223



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                            
Query: 295      ctctgatgtacaagatcaccatgaataacaacaaagtcacctga 338
                ||||| |||| |||||| ||||||||||| || || ||||||||
Sbjct: 28258316 ctctggtgtataagatctccatgaataaccaccaaatcacctga 28258359

>gb|AC087797.5| Oryza sativa chromosome 3 BAC OSJNBb0022E02 genomic sequence, complete
              sequence
          Length = 122497

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                          
Query: 207    ccagttatccttggaccatttacatccttccatgtcaactacatgcaagctcagtgcatg 266
              |||||| | ||||||||||| |||||||||  | |||| |||||| ||||||||||||||
Sbjct: 109287 ccagttttgcttggaccattcacatccttcggtatcaattacatgtaagctcagtgcatg 109346

                                
Query: 267    tcttgagactggagaaag 284
              |||||| || ||||||||
Sbjct: 109347 tcttgacaccggagaaag 109364



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                          
Query: 295    ctctgatgtacaagatcaccatgaataacaacaaagtcacctga 338
              ||||| |||| |||||| ||||||||||| || || ||||||||
Sbjct: 109457 ctctggtgtataagatctccatgaataaccaccaaatcacctga 109500

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                            
Query: 207      ccagttatccttggaccatttacatccttccatgtcaactacatgcaagctcagtgcatg 266
                |||||| | ||||||||||| |||||||||  | |||| |||||| ||||||||||||||
Sbjct: 28349470 ccagttttgcttggaccattcacatccttcggtatcaattacatgtaagctcagtgcatg 28349529

                                  
Query: 267      tcttgagactggagaaag 284
                |||||| || ||||||||
Sbjct: 28349530 tcttgacaccggagaaag 28349547



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                            
Query: 295      ctctgatgtacaagatcaccatgaataacaacaaagtcacctga 338
                ||||| |||| |||||| ||||||||||| || || ||||||||
Sbjct: 28349640 ctctggtgtataagatctccatgaataaccaccaaatcacctga 28349683

>gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0486C01,
             complete sequence
          Length = 146432

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                     
Query: 217   ttggaccatttacatccttccatgtcaactacatgcaagctcagtgcatgtcttga 272
             |||||||||| |||||||||  | |||| |||||| ||||||||||||||||||||
Sbjct: 60914 ttggaccattcacatccttcggtatcaattacatgtaagctcagtgcatgtcttga 60969



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 95/117 (81%)
 Strand = Plus / Plus

                                                                         
Query: 295   ctctgatgtacaagatcaccatgaataacaacaaagtcacctgatttcatttccagtggt 354
             ||||| ||||||||||| ||||||||||| || || |||||||| || | ||| | ||| 
Sbjct: 61074 ctctggtgtacaagatctccatgaataaccaccaaatcacctgactttacttctaatggc 61133

                                                                      
Query: 355   acaaactctttctgatcataaagcggggagggacgatcaaaatgagtgccattttca 411
             ||||| |||||| |||||||    || || ||| |||||||||||||  ||||||||
Sbjct: 61134 acaaattctttcagatcataggttggcgaaggatgatcaaaatgagtatcattttca 61190

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                        
Query: 217      ttggaccatttacatccttccatgtcaactacatgcaagctcagtgcatgtcttga 272
                |||||||||| |||||||||  | |||| |||||| ||||||||||||||||||||
Sbjct: 23129139 ttggaccattcacatccttcggtatcaattacatgtaagctcagtgcatgtcttga 23129194



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 95/117 (81%)
 Strand = Plus / Plus

                                                                            
Query: 295      ctctgatgtacaagatcaccatgaataacaacaaagtcacctgatttcatttccagtggt 354
                ||||| ||||||||||| ||||||||||| || || |||||||| || | ||| | ||| 
Sbjct: 23129299 ctctggtgtacaagatctccatgaataaccaccaaatcacctgactttacttctaatggc 23129358

                                                                         
Query: 355      acaaactctttctgatcataaagcggggagggacgatcaaaatgagtgccattttca 411
                ||||| |||||| |||||||    || || ||| |||||||||||||  ||||||||
Sbjct: 23129359 acaaattctttcagatcataggttggcgaaggatgatcaaaatgagtatcattttca 23129415

>gb|AC073533.19| Homo sapiens X BAC RP11-589J20 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 182056

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 319   ataacaacaaagtcacctgat 339
             |||||||||||||||||||||
Sbjct: 16258 ataacaacaaagtcacctgat 16278

>emb|BX548040.19| Zebrafish DNA sequence from clone CH211-190L11 in linkage group 12,
             complete sequence
          Length = 147855

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    tttacagtgtacacatgtga 49
             ||||||||||||||||||||
Sbjct: 50487 tttacagtgtacacatgtga 50468

>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 51      agagaatgaagaaaaaacag 70
               ||||||||||||||||||||
Sbjct: 4809735 agagaatgaagaaaaaacag 4809716

>emb|AL449103.15| Human DNA sequence from clone RP11-478B20 on chromosome 13, complete
            sequence
          Length = 58473

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   aatgaagaaaaaacagcatt 74
            ||||||||||||||||||||
Sbjct: 5935 aatgaagaaaaaacagcatt 5916

>emb|AL445430.15| Human DNA sequence from clone RP11-716O23 on chromosome 6 Contains one or
              two novel genes, a repressor of protein-kinase
              (interferon-inducible double stranded RNA dependent
              inhibitor) (P58 repressor) (PRKRIR) pseudogene and a CpG
              island, complete sequence
          Length = 127862

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 267    tcttgagactggagaaaggt 286
              ||||||||||||||||||||
Sbjct: 104378 tcttgagactggagaaaggt 104359

>emb|AL365227.19| Human DNA sequence from clone RP3-422A11 on chromosome 6, complete
             sequence
          Length = 100477

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 51    agagaatgaagaaaaaacag 70
             ||||||||||||||||||||
Sbjct: 67663 agagaatgaagaaaaaacag 67682

>emb|CR848758.7| Zebrafish DNA sequence from clone DKEY-223M17 in linkage group 16,
             complete sequence
          Length = 71197

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 51    agagaatgaagaaaaaacagcatt 74
             |||||||||| |||||||||||||
Sbjct: 68916 agagaatgaaaaaaaaacagcatt 68893

>emb|AL592283.5| Mouse DNA sequence from clone RP23-386C23 on chromosome 4, complete
             sequence
          Length = 197763

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    tttacagtgtacacatgtga 49
             ||||||||||||||||||||
Sbjct: 69675 tttacagtgtacacatgtga 69694

>gb|AC146630.25| Medicago truncatula clone mth2-7f22, complete sequence
          Length = 124189

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 358   aactctttctgatcataaag 377
             ||||||||||||||||||||
Sbjct: 68260 aactctttctgatcataaag 68241

>gb|AC159625.2| Mus musculus BAC clone RP24-262L7 from chromosome 12, complete sequence
          Length = 189979

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 163    aactaagacacatacagtgg 182
              ||||||||||||||||||||
Sbjct: 135568 aactaagacacatacagtgg 135549

>gb|AC022257.19| Homo sapiens chromosome 8, clone RP11-715M14, complete sequence
          Length = 174545

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 296    tctgatgtacaagatcacca 315
              ||||||||||||||||||||
Sbjct: 104498 tctgatgtacaagatcacca 104479

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 360      ctctttctgatcataaagcg 379
                ||||||||||||||||||||
Sbjct: 24356809 ctctttctgatcataaagcg 24356828

>gb|AC001231.3| Homo sapiens chromosome 17, clone CTB-44J6, complete sequence
          Length = 134457

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   ctgaactaagacacatacag 179
             ||||||||||||||||||||
Sbjct: 28646 ctgaactaagacacatacag 28665

>gb|AC138123.2| Homo sapiens 12 BAC RP11-202G11 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 107706

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 347   ccagtggtacaaactctttc 366
             ||||||||||||||||||||
Sbjct: 68467 ccagtggtacaaactctttc 68486

>emb|AL953855.9| Zebrafish DNA sequence from clone CH211-239F4 in linkage group 1,
              complete sequence
          Length = 146080

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 30     tttacagtgtacacatgtga 49
              ||||||||||||||||||||
Sbjct: 126840 tttacagtgtacacatgtga 126859



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 30     tttacagtgtacacatgtga 49
              ||||||||||||||||||||
Sbjct: 115806 tttacagtgtacacatgtga 115825

>gb|AC161242.2| Mus musculus BAC clone RP24-200E4 from chromosome 12, complete sequence
          Length = 179665

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 163   aactaagacacatacagtgg 182
             ||||||||||||||||||||
Sbjct: 53517 aactaagacacatacagtgg 53498

>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 51      agagaatgaagaaaaaacag 70
               ||||||||||||||||||||
Sbjct: 4733454 agagaatgaagaaaaaacag 4733435

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 360      ctctttctgatcataaagcg 379
                ||||||||||||||||||||
Sbjct: 24285015 ctctttctgatcataaagcg 24285034

>emb|AL772423.4|CNS08CA1 Oryza sativa chromosome 12, . BAC OJ1058_H10 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 103803

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 360   ctctttctgatcataaagcg 379
             ||||||||||||||||||||
Sbjct: 20341 ctctttctgatcataaagcg 20360

>emb|AL772427.4|CNS08CA5 Oryza sativa chromosome 12, . BAC OJ1260_B01 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 135793

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 360    ctctttctgatcataaagcg 379
              ||||||||||||||||||||
Sbjct: 133583 ctctttctgatcataaagcg 133602


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,913,891
Number of Sequences: 3902068
Number of extensions: 3913891
Number of successful extensions: 69568
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69385
Number of HSP's gapped (non-prelim): 180
length of query: 411
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 389
effective length of database: 17,147,199,772
effective search space: 6670260711308
effective search space used: 6670260711308
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)