ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd23j11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009113.1| Triticum aestivum clone wl1.pk0012.b6:fis, full i... 890 0.0
2dbj|AK061952.1| Oryza sativa (japonica cultivar-group) cDNA clon... 206 6e-50
3dbj|AK066240.1| Oryza sativa (japonica cultivar-group) cDNA clon... 206 6e-50
4gb|BT018660.1| Zea mays clone EL01N0509A01.d mRNA sequence 178 1e-41
5gb|BT009128.1| Triticum aestivum clone wl1n.pk0024.g3:fis, full ... 178 1e-41
6gb|AY108714.1| Zea mays PCO089133 mRNA sequence 178 1e-41
7gb|AC118285.2| Oryza sativa (japonica cultivar-group) chromosome... 133 8e-28
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 133 8e-28
9ref|NM_120077.2| Arabidopsis thaliana phosphatidylinositol trans... 52 0.002
10emb|AL161594.2|ATCHRIV90 Arabidopsis thaliana DNA chromosome 4, ... 52 0.002
11emb|AL050351.1|ATT22F8 Arabidopsis thaliana DNA chromosome 4, BA... 52 0.002
12gb|AY133598.1| Arabidopsis thaliana AT4g39170/T22F8_70 mRNA, com... 52 0.002
13gb|AY037182.1| Arabidopsis thaliana AT4g39170/T22F8_70 mRNA, com... 52 0.002
14gb|AC154875.8| Mus musculus chromosome 3, clone RP23-14O16, comp... 44 0.54
15gb|CP000009.1| Gluconobacter oxydans 621H, complete genome 44 0.54
16gb|AC167466.6| Mus musculus chromosome 7, clone RP24-220N8, comp... 42 2.1
17ref|XM_389761.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 42 2.1
18gb|AC102432.9| Mus musculus chromosome 19, clone RP24-114A21, co... 42 2.1
19gb|AC161413.5| Mus musculus chromosome 19, clone RP23-106D17, co... 42 2.1
20emb|AL033519.42|HS340B19 Human DNA sequence from clone RP3-340B1... 42 2.1
21gb|AC108471.3| Homo sapiens BAC clone RP11-539G18 from 4, comple... 42 2.1
22gb|AC073529.15| Homo sapiens X BAC RP11-120D5 (Roswell Park Canc... 42 2.1
23ref|XM_313086.2| Anopheles gambiae str. PEST ENSANGP00000012820 ... 42 2.1
24gb|U69729.1|HSU69729 Human Xp22 cosmid U110E1, complete sequence 42 2.1
25gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome... 40 8.4
26gb|AC007818.8| Drosophila melanogaster clone BACR02M05, complete... 40 8.4
27ref|XM_429173.1| PREDICTED: Gallus gallus similar to TRANSCRIPTI... 40 8.4
28gb|AC117826.10| Mus musculus chromosome 1, clone RP24-81K19, com... 40 8.4
29gb|AC099741.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 8.4
30gb|AC183680.3| Pan troglodytes BAC clone CH251-425K14 from chrom... 40 8.4
31gb|AC121977.3| Mus musculus BAC clone RP24-287A16 from chromosom... 40 8.4
32gb|AC155908.3| Mus musculus BAC clone RP23-209J19 from chromosom... 40 8.4
33gb|AF034994.1| Prunus necrotic ringspot virus CH30 movement prot... 40 8.4
34gb|AC159873.11| Medicago truncatula clone mth2-46p15, complete s... 40 8.4
35gb|AC125475.11| Medicago truncatula clone mth2-5j2, complete seq... 40 8.4
36gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome 40 8.4
37emb|AJ224761.1|MMA224761 Mus musculus mRNA encoding lysine-ketog... 40 8.4
38gb|AC164626.6| Mus musculus 6 BAC RP23-472D18 (Roswell Park Canc... 40 8.4
39gb|BC005420.1| Mus musculus aminoadipate-semialdehyde synthase, ... 40 8.4
40emb|CR352330.14| Mouse DNA sequence from clone RP23-374F1 on chr... 40 8.4
41dbj|AK098141.1| Mus musculus cDNA fis, clone TRACH2010974,highly... 40 8.4
42gb|AC055710.10| Homo sapiens 3 BAC RP11-307E22 (Roswell Park Can... 40 8.4
43ref|NM_143325.2| Drosophila melanogaster CG12876-RA (CG12876), mRNA 40 8.4
44dbj|AK136216.1| Mus musculus in vitro fertilized eggs cDNA, RIKE... 40 8.4
45dbj|AK149400.1| Mus musculus adult male liver tumor cDNA, RIKEN ... 40 8.4
46gb|AY069534.1| Drosophila melanogaster LD25543 full length cDNA 40 8.4
47gb|AC151523.4| Medicago truncatula chromosome 7 BAC clone mth2-1... 40 8.4
48gb|AC175833.2| Pan troglodytes BAC clone CH251-679G1 from chromo... 40 8.4
49dbj|AK044323.1| Mus musculus adult retina cDNA, RIKEN full-lengt... 40 8.4
50dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
51gb|AC008217.5|AC008217 Drosophila melanogaster, chromosome 3R, r... 40 8.4
52gb|AC126774.2| Homo sapiens chromosome 5 clone RP11-648C7, compl... 40 8.4
53gb|AC123942.4| Mus musculus BAC clone RP23-470C23 from 1, comple... 40 8.4
54gb|AC131992.8| Mus musculus chromosome 1, clone RP24-190B16, com... 40 8.4
55gb|AE003762.4| Drosophila melanogaster chromosome 3R, section 10... 40 8.4
56ref|NM_013930.3| Mus musculus aminoadipate-semialdehyde synthase... 40 8.4
57gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.4
58gb|AC122464.3| Mus musculus BAC clone RP24-301O17 from 6, comple... 40 8.4
59emb|CT010499.9| Mouse DNA sequence from clone RP23-211K24 on chr... 40 8.4 
>gb|BT009113.1| Triticum aestivum clone wl1.pk0012.b6:fis, full insert mRNA sequence
          Length = 1325

 Score =  890 bits (449), Expect = 0.0
 Identities = 577/617 (93%), Gaps = 2/617 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    cctcagcagtccacagcccaatatacaaacagatatacagcacgccttcttttcccacac 60
            |||||| ||||| ||||||||||||||||||||||||||||  |||||||||||||| ||
Sbjct: 1251 cctcagtagtccgcagcccaatatacaaacagatatacagctagccttcttttcccatac 1192

                                                                        
Query: 61   acaaattacatgcatttacaccaacaacttatacataaatatgtaccaatggttagctct 120
            |||||||||||||||||||||  || || ||||||||||||||||| || ||||||||||
Sbjct: 1191 acaaattacatgcatttacactcacgacatatacataaatatgtacgaagggttagctct 1132

                                                                        
Query: 121  gcgcacggagagcatgatcatggcgaccgatcgat-ccagtatttatgcaccaaaagctc 179
            ||||||||||||||||||| |||||||| ||| || |||||||||| ||||||| |||||
Sbjct: 1131 gcgcacggagagcatgatcgtggcgaccaatcaattccagtatttacgcaccaacagctc 1072

                                                                        
Query: 180  caccgatgaagtgcctccgtcccccacatcgtcgtctaagctcctcagaagcagaatttc 239
            | |||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 1071 cgccgatgaagtgcctccctccccc-catcgtcgtctaagctcctcagaagcagagtttc 1013

                                                                        
Query: 240  ttcttgcgaaacttgagcatgtcttgcttgtcgatgaacgcgagcagctcatcctgacgc 299
            |||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 1012 ttcttgcggaacttgagcatgtcttgcttgtcgatgaatgcgagcagctcgtcctgacgc 953

                                                                        
Query: 300  attagcgcctcgtagagggccttctttgtagaaatcaagtcggcttccaaggcatcgacg 359
            || |||||||||||||||||||||||||||||||||||||||||||||||||| || || 
Sbjct: 952  atcagcgcctcgtagagggccttctttgtagaaatcaagtcggcttccaaggcgtccaca 893

                                                                        
Query: 360  cggcgggcggacgcattgagcagctcctccttctcaaatggcatctcagatggctttgct 419
            ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||  |
Sbjct: 892  cggcgggcggacgcattgagcagctcctccttctcgaatggcatctcggatggctttttt 833

                                                                        
Query: 420  tcgagcgcctgcaccttctcctccagctcacctagccgtcttaccagagttgaaagaatt 479
            || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 832  tcaagcgcctgcaccttctcctccagctcacctagccgtcttaccagagttgaaaggatt 773

                                                                        
Query: 480  tctttctccgtgtaggacggggcaggagatggaggtcggaattcctctttgtgctcttgc 539
            || ||||||||||||| |||||||||||| ||||||||||| ||||| |||| |||||||
Sbjct: 772  tccttctccgtgtaggccggggcaggagacggaggtcggaactcctccttgtactcttgc 713

                                                                        
Query: 540  tcttgagggcagtccacgtaatagtggtcgtgatcattggattggttcgagagccttttg 599
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  tcttgagggcagtccacgtaatagtggtcgtgatcattggattggttcgagagccttttg 653

                             
Query: 600  gccattctgctcgggat 616
            |||||||||||||||||
Sbjct: 652  gccattctgctcgggat 636
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>dbj|AK061952.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-F02, full
            insert sequence
          Length = 1673

 Score =  206 bits (104), Expect = 6e-50
 Identities = 206/240 (85%)
 Strand = Plus / Minus

                                                                        
Query: 226  agaagcagaatttcttcttgcgaaacttgagcatgtcttgcttgtcgatgaacgcgagca 285
            |||||||||||||||| || |||||||||| ||| ||||||||||| ||| |||| ||||
Sbjct: 1312 agaagcagaatttctttttacgaaacttgatcatatcttgcttgtcaatgtacgcaagca 1253

                                                                        
Query: 286  gctcatcctgacgcattagcgcctcgtagagggccttctttgtagaaatcaagtcggctt 345
            |||| ||||| ||||| || || || ||||| |||||||||||||| || || |||||||
Sbjct: 1252 gctcgtcctgccgcatcagggcttcatagagagccttctttgtagagattaactcggctt 1193

                                                                        
Query: 346  ccaaggcatcgacgcggcgggcggacgcattgagcagctcctccttctcaaatggcatct 405
            | || ||||| || |||||| |||  ||||| ||||  |||||||| |||||||||||||
Sbjct: 1192 ctaatgcatccacacggcggacggctgcattcagcaattcctccttttcaaatggcatct 1133

                                                                        
Query: 406  cagatggctttgcttcgagcgcctgcaccttctcctccagctcacctagccgtcttacca 465
            | |||||||| | |||||||||||||||||||||||||| ||| ||||| ||||||||||
Sbjct: 1132 cggatggcttcgtttcgagcgcctgcaccttctcctccaactcgcctagtcgtcttacca 1073
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>dbj|AK066240.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052B04, full
            insert sequence
          Length = 2363

 Score =  206 bits (104), Expect = 6e-50
 Identities = 206/240 (85%)
 Strand = Plus / Minus

                                                                        
Query: 226  agaagcagaatttcttcttgcgaaacttgagcatgtcttgcttgtcgatgaacgcgagca 285
            |||||||||||||||| || |||||||||| ||| ||||||||||| ||| |||| ||||
Sbjct: 2002 agaagcagaatttctttttacgaaacttgatcatatcttgcttgtcaatgtacgcaagca 1943

                                                                        
Query: 286  gctcatcctgacgcattagcgcctcgtagagggccttctttgtagaaatcaagtcggctt 345
            |||| ||||| ||||| || || || ||||| |||||||||||||| || || |||||||
Sbjct: 1942 gctcgtcctgccgcatcagggcttcatagagagccttctttgtagagattaactcggctt 1883

                                                                        
Query: 346  ccaaggcatcgacgcggcgggcggacgcattgagcagctcctccttctcaaatggcatct 405
            | || ||||| || |||||| |||  ||||| ||||  |||||||| |||||||||||||
Sbjct: 1882 ctaatgcatccacacggcggacggctgcattcagcaattcctccttttcaaatggcatct 1823

                                                                        
Query: 406  cagatggctttgcttcgagcgcctgcaccttctcctccagctcacctagccgtcttacca 465
            | |||||||| | |||||||||||||||||||||||||| ||| ||||| ||||||||||
Sbjct: 1822 cggatggcttcgtttcgagcgcctgcaccttctcctccaactcgcctagtcgtcttacca 1763
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>gb|BT018660.1| Zea mays clone EL01N0509A01.d mRNA sequence
          Length = 1796

 Score =  178 bits (90), Expect = 1e-41
 Identities = 255/310 (82%)
 Strand = Plus / Minus

                                                                        
Query: 226  agaagcagaatttcttcttgcgaaacttgagcatgtcttgcttgtcgatgaacgcgagca 285
            |||||||||| ||||| || || ||||||| ||  || ||| |||| ||| |||||||||
Sbjct: 1548 agaagcagaacttctttttacggaacttgatcagctcctgcctgtcaatgtacgcgagca 1489

                                                                        
Query: 286  gctcatcctgacgcattagcgcctcgtagagggccttctttgtagaaatcaagtcggctt 345
            |||||||||| ||||| || || ||||||||||||||||| || || ||||  |||||||
Sbjct: 1488 gctcatcctgtcgcatcagagcatcgtagagggccttcttcgtggagatcagctcggctt 1429

                                                                        
Query: 346  ccaaggcatcgacgcggcgggcggacgcattgagcagctcctccttctcaaatggcatct 405
            |||  || || ||||||||| |||  || ||||||||||||||||||||||| |||||||
Sbjct: 1428 ccagcgcgtccacgcggcggacgggtgcgttgagcagctcctccttctcaaacggcatct 1369

                                                                        
Query: 406  cagatggctttgcttcgagcgcctgcaccttctcctccagctcacctagccgtcttacca 465
            | || || || |  |||||| |||||||| |  ||||||||||||| |||||||| | ||
Sbjct: 1368 cggacgggttcgtctcgagcacctgcaccctgccctccagctcaccgagccgtctcagca 1309

                                                                        
Query: 466  gagttgaaagaatttctttctccgtgtaggacggggcaggagatggaggtcggaattcct 525
              |  || || |  || |||||||||||||||||||||||||| ||||| ||||| ||||
Sbjct: 1308 tcgacgagagcacgtccttctccgtgtaggacggggcaggagacggaggccggaactcct 1249

                      
Query: 526  ctttgtgctc 535
            | ||||||||
Sbjct: 1248 ccttgtgctc 1239
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>gb|BT009128.1| Triticum aestivum clone wl1n.pk0024.g3:fis, full insert mRNA sequence
          Length = 1341

 Score =  178 bits (90), Expect = 1e-41
 Identities = 255/310 (82%)
 Strand = Plus / Minus

                                                                        
Query: 226  agaagcagaatttcttcttgcgaaacttgagcatgtcttgcttgtcgatgaacgcgagca 285
            |||||||||| ||||| || || ||||||| ||  || ||| |||| ||| |||||||||
Sbjct: 1049 agaagcagaacttctttttacggaacttgatcagctcctgcctgtcaatgtacgcgagca 990

                                                                        
Query: 286  gctcatcctgacgcattagcgcctcgtagagggccttctttgtagaaatcaagtcggctt 345
            |||||||||| ||||| || || ||||| ||||||||||| || || ||||  |||||||
Sbjct: 989  gctcatcctgtcgcatcagagcatcgtaaagggccttcttcgtggagatcagctcggctt 930

                                                                        
Query: 346  ccaaggcatcgacgcggcgggcggacgcattgagcagctcctccttctcaaatggcatct 405
            |||  || || ||||||||| |||  || ||||||||||||||||||||||| |||||||
Sbjct: 929  ccagcgcgtccacgcggcggacggctgcgttgagcagctcctccttctcaaacggcatct 870

                                                                        
Query: 406  cagatggctttgcttcgagcgcctgcaccttctcctccagctcacctagccgtcttacca 465
            | || ||||| |  |||||| |||||||| |  ||||||||||||| |||||||| | ||
Sbjct: 869  cggacggcttcgtctcgagcacctgcaccctgccctccagctcaccgagccgtctcagca 810

                                                                        
Query: 466  gagttgaaagaatttctttctccgtgtaggacggggcaggagatggaggtcggaattcct 525
              |  || || |  || |||||||||||||||||||||||||| ||||| ||||| ||||
Sbjct: 809  tcgacgagagcacgtccttctccgtgtaggacggggcaggagacggaggccggaactcct 750

                      
Query: 526  ctttgtgctc 535
            | ||||||||
Sbjct: 749  ccttgtgctc 740
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>gb|AY108714.1| Zea mays PCO089133 mRNA sequence
          Length = 2292

 Score =  178 bits (90), Expect = 1e-41
 Identities = 255/310 (82%)
 Strand = Plus / Minus

                                                                        
Query: 226  agaagcagaatttcttcttgcgaaacttgagcatgtcttgcttgtcgatgaacgcgagca 285
            |||||||||| ||||| || || ||||||| ||  || ||| |||| ||| |||||||||
Sbjct: 1937 agaagcagaacttctttttacggaacttgatcagctcctgcctgtcaatgtacgcgagca 1878

                                                                        
Query: 286  gctcatcctgacgcattagcgcctcgtagagggccttctttgtagaaatcaagtcggctt 345
            |||||||||| ||||| || || ||||| ||||||||||| || || ||||  |||||||
Sbjct: 1877 gctcatcctgtcgcatcagagcatcgtaaagggccttcttcgtggagatcagctcggctt 1818

                                                                        
Query: 346  ccaaggcatcgacgcggcgggcggacgcattgagcagctcctccttctcaaatggcatct 405
            |||  || || ||||||||| |||  || ||||||||||||||||||||||| |||||||
Sbjct: 1817 ccagcgcgtccacgcggcggacggctgcgttgagcagctcctccttctcaaacggcatct 1758

                                                                        
Query: 406  cagatggctttgcttcgagcgcctgcaccttctcctccagctcacctagccgtcttacca 465
            | || ||||| |  |||||| |||||||| |  ||||||||||||| |||||||| | ||
Sbjct: 1757 cggacggcttcgtctcgagcacctgcaccctgccctccagctcaccgagccgtctcagca 1698

                                                                        
Query: 466  gagttgaaagaatttctttctccgtgtaggacggggcaggagatggaggtcggaattcct 525
              |  || || |  || |||||||||||||||||||||||||| ||||| ||||| ||||
Sbjct: 1697 tcgacgagagcacgtccttctccgtgtaggacggggcaggagacggaggccggaactcct 1638

                      
Query: 526  ctttgtgctc 535
            | ||||||||
Sbjct: 1637 ccttgtgctc 1628
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>gb|AC118285.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1206_C08,
             complete sequence
          Length = 115026

 Score =  133 bits (67), Expect = 8e-28
 Identities = 127/147 (86%)
 Strand = Plus / Minus

                                                                         
Query: 319   ccttctttgtagaaatcaagtcggcttccaaggcatcgacgcggcgggcggacgcattga 378
             ||||||||||||| || || |||||||| || ||||| || |||||| |||  ||||| |
Sbjct: 79296 ccttctttgtagagattaactcggcttctaatgcatccacacggcggacggctgcattca 79237

                                                                         
Query: 379   gcagctcctccttctcaaatggcatctcagatggctttgcttcgagcgcctgcaccttct 438
             |||  |||||||| |||||||||||||| |||||||| | ||||||||||||||||||||
Sbjct: 79236 gcaattcctccttttcaaatggcatctcggatggcttcgtttcgagcgcctgcaccttct 79177

                                        
Query: 439   cctccagctcacctagccgtcttacca 465
             |||||| ||| ||||| ||||||||||
Sbjct: 79176 cctccaactcgcctagtcgtcttacca 79150



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                     
Query: 246   cgaaacttgagcatgtcttgcttgtcgatgaacgcgagcagctcatcctgacgcat 301
             |||||||||| ||| ||||||||||| ||| |||| |||||||| ||||| |||||
Sbjct: 79519 cgaaacttgatcatatcttgcttgtcaatgtacgcaagcagctcgtcctgccgcat 79464
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  133 bits (67), Expect = 8e-28
 Identities = 127/147 (86%)
 Strand = Plus / Minus

                                                                            
Query: 319      ccttctttgtagaaatcaagtcggcttccaaggcatcgacgcggcgggcggacgcattga 378
                ||||||||||||| || || |||||||| || ||||| || |||||| |||  ||||| |
Sbjct: 26841056 ccttctttgtagagattaactcggcttctaatgcatccacacggcggacggctgcattca 26840997

                                                                            
Query: 379      gcagctcctccttctcaaatggcatctcagatggctttgcttcgagcgcctgcaccttct 438
                |||  |||||||| |||||||||||||| |||||||| | ||||||||||||||||||||
Sbjct: 26840996 gcaattcctccttttcaaatggcatctcggatggcttcgtttcgagcgcctgcaccttct 26840937

                                           
Query: 439      cctccagctcacctagccgtcttacca 465
                |||||| ||| ||||| ||||||||||
Sbjct: 26840936 cctccaactcgcctagtcgtcttacca 26840910



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                        
Query: 246      cgaaacttgagcatgtcttgcttgtcgatgaacgcgagcagctcatcctgacgcat 301
                |||||||||| ||| ||||||||||| ||| |||| |||||||| ||||| |||||
Sbjct: 26841279 cgaaacttgatcatatcttgcttgtcaatgtacgcaagcagctcgtcctgccgcat 26841224
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>ref|NM_120077.2| Arabidopsis thaliana phosphatidylinositol transporter/ transporter
            AT4G39170 mRNA, complete cds
          Length = 2216

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 372  gcattgagcagctcctccttctcaaatggcatctcagatggctttg 417
            ||||| ||||| ||||| |||||| | |||||||||||||||||||
Sbjct: 1896 gcattaagcagttcctctttctcataaggcatctcagatggctttg 1851
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>emb|AL161594.2|ATCHRIV90 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 90
          Length = 198987

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                            
Query: 372    gcattgagcagctcctccttctcaaatggcatctcagatggctttg 417
              ||||| ||||| ||||| |||||| | |||||||||||||||||||
Sbjct: 157399 gcattaagcagttcctctttctcataaggcatctcagatggctttg 157354
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>emb|AL050351.1|ATT22F8 Arabidopsis thaliana DNA chromosome 4, BAC clone T22F8 (ESSA project)
          Length = 89035

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                           
Query: 372   gcattgagcagctcctccttctcaaatggcatctcagatggctttg 417
             ||||| ||||| ||||| |||||| | |||||||||||||||||||
Sbjct: 25935 gcattaagcagttcctctttctcataaggcatctcagatggctttg 25890
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>gb|AY133598.1| Arabidopsis thaliana AT4g39170/T22F8_70 mRNA, complete cds
          Length = 1752

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 372  gcattgagcagctcctccttctcaaatggcatctcagatggctttg 417
            ||||| ||||| ||||| |||||| | |||||||||||||||||||
Sbjct: 1682 gcattaagcagttcctctttctcataaggcatctcagatggctttg 1637
to top
>gb|AY037182.1| Arabidopsis thaliana AT4g39170/T22F8_70 mRNA, complete cds
          Length = 2214

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 372  gcattgagcagctcctccttctcaaatggcatctcagatggctttg 417
            ||||| ||||| ||||| |||||| | |||||||||||||||||||
Sbjct: 1895 gcattaagcagttcctctttctcataaggcatctcagatggctttg 1850
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>gb|AC154875.8| Mus musculus chromosome 3, clone RP23-14O16, complete sequence
          Length = 225841

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 307    cctcgtagagggccttctttgt 328
              ||||||||||||||||||||||
Sbjct: 144621 cctcgtagagggccttctttgt 144642
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>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 116    gctctgcgcacggagagcatgatcatggcg 145
              |||||||||||| ||||||||| |||||||
Sbjct: 409167 gctctgcgcacgcagagcatgaccatggcg 409138
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>gb|AC167466.6| Mus musculus chromosome 7, clone RP24-220N8, complete sequence
          Length = 163721

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 88    cttatacataaatatgtacca 108
             |||||||||||||||||||||
Sbjct: 25735 cttatacataaatatgtacca 25755
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>ref|XM_389761.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09585.1)
            partial mRNA
          Length = 2727

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 124  cacggagagcatgatcatggc 144
            |||||||||||||||||||||
Sbjct: 2676 cacggagagcatgatcatggc 2696
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>gb|AC102432.9| Mus musculus chromosome 19, clone RP24-114A21, complete sequence
          Length = 199240

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 88    cttatacataaatatgtacca 108
             |||||||||||||||||||||
Sbjct: 87894 cttatacataaatatgtacca 87874
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>gb|AC161413.5| Mus musculus chromosome 19, clone RP23-106D17, complete sequence
          Length = 215356

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 88    cttatacataaatatgtacca 108
             |||||||||||||||||||||
Sbjct: 43170 cttatacataaatatgtacca 43190
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>emb|AL033519.42|HS340B19 Human DNA sequence from clone RP3-340B19 on chromosome 6p21.2-21.3
              Contains the TULP1 gene for tubby like protein 1, a novel
              gene, ribosomal protein S15A (RPS15A) and L36 (RPL36)
              pseudogenes, the 3' end of the FKBP5 gene for FK506 binding
              protein 5 (FKBP51) and two CpG islands, complete sequence
          Length = 178985

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 522    tcctctttgtgctcttgctct 542
              |||||||||||||||||||||
Sbjct: 167195 tcctctttgtgctcttgctct 167175
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>gb|AC108471.3| Homo sapiens BAC clone RP11-539G18 from 4, complete sequence
          Length = 141442

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 19    caatatacaaacagatataca 39
             |||||||||||||||||||||
Sbjct: 38991 caatatacaaacagatataca 38971
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>gb|AC073529.15| Homo sapiens X BAC RP11-120D5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 78659

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 379   gcagctcctccttctcaaatggcat 403
             ||||| |||||||||||||||||||
Sbjct: 29434 gcagcccctccttctcaaatggcat 29410
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>ref|XM_313086.2| Anopheles gambiae str. PEST ENSANGP00000012820 (ENSANGG00000010331),
            partial mRNA
          Length = 3651

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 420  tcgagcgcctgcaccttctcctccagctc 448
            |||||||||| |||||| |||||||||||
Sbjct: 1412 tcgagcgccttcaccttatcctccagctc 1384
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>gb|U69729.1|HSU69729 Human Xp22 cosmid U110E1, complete sequence
          Length = 44185

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 379   gcagctcctccttctcaaatggcat 403
             ||||| |||||||||||||||||||
Sbjct: 15425 gcagcccctccttctcaaatggcat 15449
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>gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0063D09 map S1559, complete sequence
          Length = 190721

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 421   cgagcgcctgcaccttctcc 440
             ||||||||||||||||||||
Sbjct: 31115 cgagcgcctgcaccttctcc 31096
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>gb|AC007818.8| Drosophila melanogaster clone BACR02M05, complete sequence
          Length = 188549

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 375   ttgagcagctcctccttctc 394
             ||||||||||||||||||||
Sbjct: 63796 ttgagcagctcctccttctc 63815
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>ref|XM_429173.1| PREDICTED: Gallus gallus similar to TRANSCRIPTION FACTOR JUN-D
           (LOC431621), mRNA
          Length = 657

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 423 agcgcctgcaccttctcctccagc 446
           ||||||| ||||||||||||||||
Sbjct: 416 agcgccttcaccttctcctccagc 393
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>gb|AC117826.10| Mus musculus chromosome 1, clone RP24-81K19, complete sequence
          Length = 227953

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 500    ggcaggagatggaggtcgga 519
              ||||||||||||||||||||
Sbjct: 113567 ggcaggagatggaggtcgga 113586
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>gb|AC099741.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-92M3, complete
             sequence
          Length = 249636

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 427   cctgcaccttctcctccagc 446
             ||||||||||||||||||||
Sbjct: 70341 cctgcaccttctcctccagc 70360
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>gb|AC183680.3| Pan troglodytes BAC clone CH251-425K14 from chromosome 9, complete
              sequence
          Length = 163619

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 89     ttatacataaatatgtacca 108
              ||||||||||||||||||||
Sbjct: 114433 ttatacataaatatgtacca 114414
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>gb|AC121977.3| Mus musculus BAC clone RP24-287A16 from chromosome 6, complete sequence
          Length = 186279

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 427    cctgcaccttctcctccagc 446
              ||||||||||||||||||||
Sbjct: 174747 cctgcaccttctcctccagc 174766
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>gb|AC155908.3| Mus musculus BAC clone RP23-209J19 from chromosome 9, complete sequence
          Length = 181952

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    caatatacaaacagatatac 38
             ||||||||||||||||||||
Sbjct: 16010 caatatacaaacagatatac 16029
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>gb|AF034994.1| Prunus necrotic ringspot virus CH30 movement protein gene, complete
            cds; and coat protein gene, partial cds
          Length = 1658

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 258  atgtcttgcttgtcgatgaa 277
            ||||||||||||||||||||
Sbjct: 1638 atgtcttgcttgtcgatgaa 1657
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>gb|AC159873.11| Medicago truncatula clone mth2-46p15, complete sequence
          Length = 129948

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 59     acacaaattacatgcatttacaccaacaactt 90
              ||||||||||||| ||||||||| || |||||
Sbjct: 100122 acacaaattacatacatttacactaaaaactt 100091
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>gb|AC125475.11| Medicago truncatula clone mth2-5j2, complete sequence
          Length = 165679

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 59    acacaaattacatgcatttacaccaacaactt 90
             ||||||||||||| ||||||||| || |||||
Sbjct: 94721 acacaaattacatacatttacactaaaaactt 94752
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>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome
          Length = 3665893

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 423    agcgcctgcaccttctcctc 442
              ||||||||||||||||||||
Sbjct: 210352 agcgcctgcaccttctcctc 210333
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>emb|AJ224761.1|MMA224761 Mus musculus mRNA encoding lysine-ketoglutarate
           reductase/saccharopine dehydrogenase
          Length = 3300

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 42  acgccttcttttcccacaca 61
           ||||||||||||||||||||
Sbjct: 329 acgccttcttttcccacaca 348
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>gb|AC164626.6| Mus musculus 6 BAC RP23-472D18 (Roswell Park Cancer Institute
            (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 190308

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 427  cctgcaccttctcctccagc 446
            ||||||||||||||||||||
Sbjct: 4664 cctgcaccttctcctccagc 4645
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>gb|BC005420.1| Mus musculus aminoadipate-semialdehyde synthase, mRNA (cDNA clone
           MGC:5717 IMAGE:3600654), complete cds
          Length = 3369

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 42  acgccttcttttcccacaca 61
           ||||||||||||||||||||
Sbjct: 424 acgccttcttttcccacaca 443
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>emb|CR352330.14| Mouse DNA sequence from clone RP23-374F1 on chromosome X, complete
            sequence
          Length = 82726

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 21   atatacaaacagatatacag 40
            ||||||||||||||||||||
Sbjct: 7589 atatacaaacagatatacag 7608
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>dbj|AK098141.1| Mus musculus cDNA fis, clone TRACH2010974,highly similar to Mus
           musculus mRNA encoding lysine-ketoglutarate
           reductase/saccharopine dehydrogenase
          Length = 3315

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 42  acgccttcttttcccacaca 61
           ||||||||||||||||||||
Sbjct: 379 acgccttcttttcccacaca 398
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>gb|AC055710.10| Homo sapiens 3 BAC RP11-307E22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 169964

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 69     catgcatttacaccaacaac 88
              ||||||||||||||||||||
Sbjct: 111881 catgcatttacaccaacaac 111900
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>ref|NM_143325.2| Drosophila melanogaster CG12876-RA (CG12876), mRNA
          Length = 3028

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 375  ttgagcagctcctccttctc 394
            ||||||||||||||||||||
Sbjct: 2386 ttgagcagctcctccttctc 2367
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>dbj|AK136216.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length
           enriched library, clone:7420481G22
           product:aminoadipate-semialdehyde synthase, full insert
           sequence
          Length = 3159

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 42  acgccttcttttcccacaca 61
           ||||||||||||||||||||
Sbjct: 387 acgccttcttttcccacaca 406
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>dbj|AK149400.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length
           enriched library, clone:C730005O19
           product:aminoadipate-semialdehyde synthase, full insert
           sequence
          Length = 3626

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 42  acgccttcttttcccacaca 61
           ||||||||||||||||||||
Sbjct: 363 acgccttcttttcccacaca 382
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>gb|AY069534.1| Drosophila melanogaster LD25543 full length cDNA
          Length = 3010

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 375  ttgagcagctcctccttctc 394
            ||||||||||||||||||||
Sbjct: 2349 ttgagcagctcctccttctc 2330
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>gb|AC151523.4| Medicago truncatula chromosome 7 BAC clone mth2-166j21, complete
             sequence
          Length = 123340

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    acacaaattacatgcattta 78
             ||||||||||||||||||||
Sbjct: 80785 acacaaattacatgcattta 80766
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>gb|AC175833.2| Pan troglodytes BAC clone CH251-679G1 from chromosome 7, complete
              sequence
          Length = 191935

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 517    ggaattcctctttgtgctct 536
              ||||||||||||||||||||
Sbjct: 145296 ggaattcctctttgtgctct 145315
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>dbj|AK044323.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library,
           clone:A930007I18 product:lysine oxoglutarate reductase,
           saccharopine dehydrogenase, full insert sequence
          Length = 3508

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 42  acgccttcttttcccacaca 61
           ||||||||||||||||||||
Sbjct: 419 acgccttcttttcccacaca 438
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 421     cgagcgcctgcaccttctcc 440
               ||||||||||||||||||||
Sbjct: 3663443 cgagcgcctgcaccttctcc 3663424
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>gb|AC008217.5|AC008217 Drosophila melanogaster, chromosome 3R, region 98B-98B, BAC clone
            BACR10J03, complete sequence
          Length = 193245

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 375  ttgagcagctcctccttctc 394
            ||||||||||||||||||||
Sbjct: 6519 ttgagcagctcctccttctc 6538
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>gb|AC126774.2| Homo sapiens chromosome 5 clone RP11-648C7, complete sequence
          Length = 62171

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    acaaattacatgcatttaca 80
             ||||||||||||||||||||
Sbjct: 31593 acaaattacatgcatttaca 31574
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>gb|AC123942.4| Mus musculus BAC clone RP23-470C23 from 1, complete sequence
          Length = 170567

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    ttatacataaatatgtacca 108
             ||||||||||||||||||||
Sbjct: 64087 ttatacataaatatgtacca 64068
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>gb|AC131992.8| Mus musculus chromosome 1, clone RP24-190B16, complete sequence
          Length = 163820

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 500   ggcaggagatggaggtcgga 519
             ||||||||||||||||||||
Sbjct: 28826 ggcaggagatggaggtcgga 28845
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>gb|AE003762.4| Drosophila melanogaster chromosome 3R, section 100 of 118 of the
             complete sequence
          Length = 231486

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 375   ttgagcagctcctccttctc 394
             ||||||||||||||||||||
Sbjct: 36197 ttgagcagctcctccttctc 36216
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>ref|NM_013930.3| Mus musculus aminoadipate-semialdehyde synthase (Aass), nuclear
           gene encoding mitochondrial protein, mRNA
          Length = 3692

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 42  acgccttcttttcccacaca 61
           ||||||||||||||||||||
Sbjct: 426 acgccttcttttcccacaca 445
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 421     cgagcgcctgcaccttctcc 440
               ||||||||||||||||||||
Sbjct: 3672137 cgagcgcctgcaccttctcc 3672118
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>gb|AC122464.3| Mus musculus BAC clone RP24-301O17 from 6, complete sequence
          Length = 168611

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    acgccttcttttcccacaca 61
             ||||||||||||||||||||
Sbjct: 79363 acgccttcttttcccacaca 79344
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>emb|CT010499.9| Mouse DNA sequence from clone RP23-211K24 on chromosome 9, complete
              sequence
          Length = 212470

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     caatatacaaacagatatac 38
              ||||||||||||||||||||
Sbjct: 141463 caatatacaaacagatatac 141482


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,887,358
Number of Sequences: 3902068
Number of extensions: 5887358
Number of successful extensions: 123764
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 123512
Number of HSP's gapped (non-prelim): 250
length of query: 616
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 593
effective length of database: 17,143,297,704
effective search space: 10165975538472
effective search space used: 10165975538472
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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