>gb|BT009113.1| Triticum aestivum clone wl1.pk0012.b6:fis, full insert mRNA sequence
          Length = 1325

 Score =  460 bits (232), Expect = e-126
 Identities = 311/335 (92%), Gaps = 2/335 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    caatatacaaacagatatacagcacgccttcttttnccacacacaaattacatgcattta 60
            |||||||||||||||||||||||  |||||||||| ||| ||||||||||||||||||||
Sbjct: 1233 caatatacaaacagatatacagctagccttcttttcccatacacaaattacatgcattta 1174

                                                                        
Query: 61   caccaacaacttatacataaatatgtaccaatggttagctctgcgcacggagagcatgat 120
            |||  || || ||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 1173 cactcacgacatatacataaatatgtacgaagggttagctctgcgcacggagagcatgat 1114

                                                                        
Query: 121  catggcgaccgatcgat-ccagtatttatgcaccaaaagctccaccgatgaagtgcctcc 179
            | |||||||| ||| || |||||||||| ||||||| |||||| ||||||||||||||||
Sbjct: 1113 cgtggcgaccaatcaattccagtatttacgcaccaacagctccgccgatgaagtgcctcc 1054

                                                                        
Query: 180  gtcccccacatcgtcgtctaagctcctcagaagcagaatttcttcttgcgaaacttgagc 239
             |||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 1053 ctccccc-catcgtcgtctaagctcctcagaagcagagtttcttcttgcggaacttgagc 995

                                                                        
Query: 240  atgtcttgcttgtcgatgaacgcgagcagctcatcctgacgcattagcgcctcgtagagg 299
            |||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||
Sbjct: 994  atgtcttgcttgtcgatgaatgcgagcagctcgtcctgacgcatcagcgcctcgtagagg 935

                                               
Query: 300  gccttctttgtagaaatcaagtcggcttccaaggc 334
            |||||||||||||||||||||||||||||||||||
Sbjct: 934  gccttctttgtagaaatcaagtcggcttccaaggc 900

>dbj|AK061952.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-F02, full
            insert sequence
          Length = 1673

 Score =  105 bits (53), Expect = 9e-20
 Identities = 104/121 (85%)
 Strand = Plus / Minus

                                                                        
Query: 208  agaagcagaatttcttcttgcgaaacttgagcatgtcttgcttgtcgatgaacgcgagca 267
            |||||||||||||||| || |||||||||| ||| ||||||||||| ||| |||| ||||
Sbjct: 1312 agaagcagaatttctttttacgaaacttgatcatatcttgcttgtcaatgtacgcaagca 1253

                                                                        
Query: 268  gctcatcctgacgcattagcgcctcgtagagggccttctttgtagaaatcaagtcggctt 327
            |||| ||||| ||||| || || || ||||| |||||||||||||| || || |||||||
Sbjct: 1252 gctcgtcctgccgcatcagggcttcatagagagccttctttgtagagattaactcggctt 1193

             
Query: 328  c 328
            |
Sbjct: 1192 c 1192

>dbj|AK066240.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052B04, full
            insert sequence
          Length = 2363

 Score =  105 bits (53), Expect = 9e-20
 Identities = 104/121 (85%)
 Strand = Plus / Minus

                                                                        
Query: 208  agaagcagaatttcttcttgcgaaacttgagcatgtcttgcttgtcgatgaacgcgagca 267
            |||||||||||||||| || |||||||||| ||| ||||||||||| ||| |||| ||||
Sbjct: 2002 agaagcagaatttctttttacgaaacttgatcatatcttgcttgtcaatgtacgcaagca 1943

                                                                        
Query: 268  gctcatcctgacgcattagcgcctcgtagagggccttctttgtagaaatcaagtcggctt 327
            |||| ||||| ||||| || || || ||||| |||||||||||||| || || |||||||
Sbjct: 1942 gctcgtcctgccgcatcagggcttcatagagagccttctttgtagagattaactcggctt 1883

             
Query: 328  c 328
            |
Sbjct: 1882 c 1882

>gb|BT018660.1| Zea mays clone EL01N0509A01.d mRNA sequence
          Length = 1796

 Score = 85.7 bits (43), Expect = 8e-14
 Identities = 103/123 (83%)
 Strand = Plus / Minus

                                                                        
Query: 208  agaagcagaatttcttcttgcgaaacttgagcatgtcttgcttgtcgatgaacgcgagca 267
            |||||||||| ||||| || || ||||||| ||  || ||| |||| ||| |||||||||
Sbjct: 1548 agaagcagaacttctttttacggaacttgatcagctcctgcctgtcaatgtacgcgagca 1489

                                                                        
Query: 268  gctcatcctgacgcattagcgcctcgtagagggccttctttgtagaaatcaagtcggctt 327
            |||||||||| ||||| || || ||||||||||||||||| || || ||||  |||||||
Sbjct: 1488 gctcatcctgtcgcatcagagcatcgtagagggccttcttcgtggagatcagctcggctt 1429

               
Query: 328  cca 330
            |||
Sbjct: 1428 cca 1426

>gb|BT009128.1| Triticum aestivum clone wl1n.pk0024.g3:fis, full insert mRNA sequence
          Length = 1341

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 102/123 (82%)
 Strand = Plus / Minus

                                                                        
Query: 208  agaagcagaatttcttcttgcgaaacttgagcatgtcttgcttgtcgatgaacgcgagca 267
            |||||||||| ||||| || || ||||||| ||  || ||| |||| ||| |||||||||
Sbjct: 1049 agaagcagaacttctttttacggaacttgatcagctcctgcctgtcaatgtacgcgagca 990

                                                                        
Query: 268  gctcatcctgacgcattagcgcctcgtagagggccttctttgtagaaatcaagtcggctt 327
            |||||||||| ||||| || || ||||| ||||||||||| || || ||||  |||||||
Sbjct: 989  gctcatcctgtcgcatcagagcatcgtaaagggccttcttcgtggagatcagctcggctt 930

               
Query: 328  cca 330
            |||
Sbjct: 929  cca 927

>gb|AY108714.1| Zea mays PCO089133 mRNA sequence
          Length = 2292

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 102/123 (82%)
 Strand = Plus / Minus

                                                                        
Query: 208  agaagcagaatttcttcttgcgaaacttgagcatgtcttgcttgtcgatgaacgcgagca 267
            |||||||||| ||||| || || ||||||| ||  || ||| |||| ||| |||||||||
Sbjct: 1937 agaagcagaacttctttttacggaacttgatcagctcctgcctgtcaatgtacgcgagca 1878

                                                                        
Query: 268  gctcatcctgacgcattagcgcctcgtagagggccttctttgtagaaatcaagtcggctt 327
            |||||||||| ||||| || || ||||| ||||||||||| || || ||||  |||||||
Sbjct: 1877 gctcatcctgtcgcatcagagcatcgtaaagggccttcttcgtggagatcagctcggctt 1818

               
Query: 328  cca 330
            |||
Sbjct: 1817 cca 1815

>gb|AC118285.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1206_C08,
             complete sequence
          Length = 115026

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                     
Query: 228   cgaaacttgagcatgtcttgcttgtcgatgaacgcgagcagctcatcctgacgcat 283
             |||||||||| ||| ||||||||||| ||| |||| |||||||| ||||| |||||
Sbjct: 79519 cgaaacttgatcatatcttgcttgtcaatgtacgcaagcagctcgtcctgccgcat 79464

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                        
Query: 228      cgaaacttgagcatgtcttgcttgtcgatgaacgcgagcagctcatcctgacgcat 283
                |||||||||| ||| ||||||||||| ||| |||| |||||||| ||||| |||||
Sbjct: 26841279 cgaaacttgatcatatcttgcttgtcaatgtacgcaagcagctcgtcctgccgcat 26841224

>gb|AC154875.8| Mus musculus chromosome 3, clone RP23-14O16, complete sequence
          Length = 225841

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 289    cctcgtagagggccttctttgt 310
              ||||||||||||||||||||||
Sbjct: 144621 cctcgtagagggccttctttgt 144642

>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 98     gctctgcgcacggagagcatgatcatggcg 127
              |||||||||||| ||||||||| |||||||
Sbjct: 409167 gctctgcgcacgcagagcatgaccatggcg 409138

>gb|AC167466.6| Mus musculus chromosome 7, clone RP24-220N8, complete sequence
          Length = 163721

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 70    cttatacataaatatgtacca 90
             |||||||||||||||||||||
Sbjct: 25735 cttatacataaatatgtacca 25755

>ref|XM_389761.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09585.1)
            partial mRNA
          Length = 2727

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 106  cacggagagcatgatcatggc 126
            |||||||||||||||||||||
Sbjct: 2676 cacggagagcatgatcatggc 2696

>gb|AC102432.9| Mus musculus chromosome 19, clone RP24-114A21, complete sequence
          Length = 199240

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 70    cttatacataaatatgtacca 90
             |||||||||||||||||||||
Sbjct: 87894 cttatacataaatatgtacca 87874

>gb|AC161413.5| Mus musculus chromosome 19, clone RP23-106D17, complete sequence
          Length = 215356

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 70    cttatacataaatatgtacca 90
             |||||||||||||||||||||
Sbjct: 43170 cttatacataaatatgtacca 43190

>gb|AC108471.3| Homo sapiens BAC clone RP11-539G18 from 4, complete sequence
          Length = 141442

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1     caatatacaaacagatataca 21
             |||||||||||||||||||||
Sbjct: 38991 caatatacaaacagatataca 38971

>gb|AC183680.3| Pan troglodytes BAC clone CH251-425K14 from chromosome 9, complete
              sequence
          Length = 163619

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 71     ttatacataaatatgtacca 90
              ||||||||||||||||||||
Sbjct: 114433 ttatacataaatatgtacca 114414

>gb|AC155908.3| Mus musculus BAC clone RP23-209J19 from chromosome 9, complete sequence
          Length = 181952

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     caatatacaaacagatatac 20
             ||||||||||||||||||||
Sbjct: 16010 caatatacaaacagatatac 16029

>gb|AF034994.1| Prunus necrotic ringspot virus CH30 movement protein gene, complete
            cds; and coat protein gene, partial cds
          Length = 1658

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 240  atgtcttgcttgtcgatgaa 259
            ||||||||||||||||||||
Sbjct: 1638 atgtcttgcttgtcgatgaa 1657

>gb|AC159873.11| Medicago truncatula clone mth2-46p15, complete sequence
          Length = 129948

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 41     acacaaattacatgcatttacaccaacaactt 72
              ||||||||||||| ||||||||| || |||||
Sbjct: 100122 acacaaattacatacatttacactaaaaactt 100091

>gb|AC125475.11| Medicago truncatula clone mth2-5j2, complete sequence
          Length = 165679

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 41    acacaaattacatgcatttacaccaacaactt 72
             ||||||||||||| ||||||||| || |||||
Sbjct: 94721 acacaaattacatacatttacactaaaaactt 94752

>emb|CR352330.14| Mouse DNA sequence from clone RP23-374F1 on chromosome X, complete
            sequence
          Length = 82726

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 3    atatacaaacagatatacag 22
            ||||||||||||||||||||
Sbjct: 7589 atatacaaacagatatacag 7608

>gb|AC055710.10| Homo sapiens 3 BAC RP11-307E22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 169964

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 51     catgcatttacaccaacaac 70
              ||||||||||||||||||||
Sbjct: 111881 catgcatttacaccaacaac 111900

>gb|AC151523.4| Medicago truncatula chromosome 7 BAC clone mth2-166j21, complete
             sequence
          Length = 123340

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    acacaaattacatgcattta 60
             ||||||||||||||||||||
Sbjct: 80785 acacaaattacatgcattta 80766

>gb|AC126774.2| Homo sapiens chromosome 5 clone RP11-648C7, complete sequence
          Length = 62171

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    acaaattacatgcatttaca 62
             ||||||||||||||||||||
Sbjct: 31593 acaaattacatgcatttaca 31574

>gb|AC123942.4| Mus musculus BAC clone RP23-470C23 from 1, complete sequence
          Length = 170567

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    ttatacataaatatgtacca 90
             ||||||||||||||||||||
Sbjct: 64087 ttatacataaatatgtacca 64068

>emb|CT010499.9| Mouse DNA sequence from clone RP23-211K24 on chromosome 9, complete
              sequence
          Length = 212470

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      caatatacaaacagatatac 20
              ||||||||||||||||||||
Sbjct: 141463 caatatacaaacagatatac 141482


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,777,294
Number of Sequences: 3902068
Number of extensions: 2777294
Number of successful extensions: 55914
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55849
Number of HSP's gapped (non-prelim): 63
length of query: 336
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 314
effective length of database: 17,147,199,772
effective search space: 5384220728408
effective search space used: 5384220728408
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)