ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd23j03 |
|---|---|
| Clone Library Name | barley_pub |
>TMEDA_RABIT (Q28735) Transmembrane emp24 domain-containing protein 10 precursor| (Transmembrane protein Tmp21) (21 kDa transmembrane trafficking protein) (Integral membrane protein p23) Length = 219 Score = 73.6 bits (179), Expect = 5e-13 Identities = 43/148 (29%), Positives = 76/148 (51%) Frame = -3 Query: 610 RVSLRVTSPYGNSMHYSENVQSGHFAFTAVEAGDYLACFWAPDHKPPVTVTFEFDWKSGV 431 R L++T G+ ++ E+ G FAFT + + CF + D K GV Sbjct: 71 RTHLKITDSAGHILYSKEDASKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGV 130 Query: 430 TAKDWSNVAKKGKVDMMELELKKLEDTIQAIHXXXXXXXXXXXXMQNINRQTNSRMGWLS 251 AK++ +AK K+ +E+EL++LED ++I M++ N TN+R+ + S Sbjct: 131 EAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFS 190 Query: 250 FLSLGICLSVAGLQLWHLKTFFERKKLL 167 S+ + +A Q+++L+ FF+ KKL+ Sbjct: 191 IFSMFCLIGLATWQVFYLRRFFKAKKLI 218
>TMEDA_RAT (Q63584) Transmembrane emp24 domain-containing protein 10 precursor| (Transmembrane protein Tmp21) (21 kDa transmembrane trafficking protein) Length = 219 Score = 73.2 bits (178), Expect = 6e-13 Identities = 43/148 (29%), Positives = 76/148 (51%) Frame = -3 Query: 610 RVSLRVTSPYGNSMHYSENVQSGHFAFTAVEAGDYLACFWAPDHKPPVTVTFEFDWKSGV 431 R L++T G+ ++ E+ G FAFT + + CF + D K GV Sbjct: 71 RTHLKITDSAGHILYAKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGV 130 Query: 430 TAKDWSNVAKKGKVDMMELELKKLEDTIQAIHXXXXXXXXXXXXMQNINRQTNSRMGWLS 251 AK++ +AK K+ +E+EL++LED ++I M++ N TN+R+ + S Sbjct: 131 EAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFS 190 Query: 250 FLSLGICLSVAGLQLWHLKTFFERKKLL 167 S+ + +A Q+++L+ FF+ KKL+ Sbjct: 191 IFSMFCLIGLATWQVFYLRRFFKAKKLI 218
>TMEDA_MOUSE (Q9D1D4) Transmembrane emp24 domain-containing protein 10 precursor| (Transmembrane protein Tmp21) (21 kDa transmembrane trafficking protein) Length = 219 Score = 73.2 bits (178), Expect = 6e-13 Identities = 43/148 (29%), Positives = 76/148 (51%) Frame = -3 Query: 610 RVSLRVTSPYGNSMHYSENVQSGHFAFTAVEAGDYLACFWAPDHKPPVTVTFEFDWKSGV 431 R L++T G+ ++ E+ G FAFT + + CF + D K GV Sbjct: 71 RTHLKITDSAGHILYAKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGV 130 Query: 430 TAKDWSNVAKKGKVDMMELELKKLEDTIQAIHXXXXXXXXXXXXMQNINRQTNSRMGWLS 251 AK++ +AK K+ +E+EL++LED ++I M++ N TN+R+ + S Sbjct: 131 EAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFS 190 Query: 250 FLSLGICLSVAGLQLWHLKTFFERKKLL 167 S+ + +A Q+++L+ FF+ KKL+ Sbjct: 191 IFSMFCLIGLATWQVFYLRRFFKAKKLI 218
>TMEDA_BOVIN (Q5E971) Transmembrane emp24 domain-containing protein 10 precursor| (Transmembrane protein Tmp21) (21 kDa transmembrane trafficking protein) Length = 219 Score = 73.2 bits (178), Expect = 6e-13 Identities = 43/148 (29%), Positives = 76/148 (51%) Frame = -3 Query: 610 RVSLRVTSPYGNSMHYSENVQSGHFAFTAVEAGDYLACFWAPDHKPPVTVTFEFDWKSGV 431 R L++T G+ ++ E+ G FAFT + + CF + D K GV Sbjct: 71 RTHLKITDSAGHILYSKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGV 130 Query: 430 TAKDWSNVAKKGKVDMMELELKKLEDTIQAIHXXXXXXXXXXXXMQNINRQTNSRMGWLS 251 AK++ +AK K+ +E+EL++LED ++I M++ N TN+R+ + S Sbjct: 131 EAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFS 190 Query: 250 FLSLGICLSVAGLQLWHLKTFFERKKLL 167 S+ + +A Q+++L+ FF+ KKL+ Sbjct: 191 IFSMFCLIGLATWQVFYLRRFFKAKKLI 218
>TMEDA_MESAU (O35587) Transmembrane protein Tmp21 precursor (21 kDa| transmembrane trafficking protein) (Integral membrane protein p23) Length = 219 Score = 72.8 bits (177), Expect = 8e-13 Identities = 43/148 (29%), Positives = 76/148 (51%) Frame = -3 Query: 610 RVSLRVTSPYGNSMHYSENVQSGHFAFTAVEAGDYLACFWAPDHKPPVTVTFEFDWKSGV 431 R L++T G+ ++ E+ G FAFT + + CF + D K GV Sbjct: 71 RTHLKITDSAGHILYAKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGV 130 Query: 430 TAKDWSNVAKKGKVDMMELELKKLEDTIQAIHXXXXXXXXXXXXMQNINRQTNSRMGWLS 251 AK++ +AK K+ +E+EL++LED ++I M++ N TN+R+ + S Sbjct: 131 EAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFS 190 Query: 250 FLSLGICLSVAGLQLWHLKTFFERKKLL 167 S+ + +A Q+++L+ FF+ KKL+ Sbjct: 191 IFSMLCLIGLATWQVFYLRRFFKAKKLI 218
>TMEDA_PONPY (Q5RE32) Transmembrane emp24 domain-containing protein 10 precursor| (Transmembrane protein Tmp21) (21 kDa transmembrane trafficking protein) Length = 219 Score = 72.4 bits (176), Expect = 1e-12 Identities = 43/148 (29%), Positives = 76/148 (51%) Frame = -3 Query: 610 RVSLRVTSPYGNSMHYSENVQSGHFAFTAVEAGDYLACFWAPDHKPPVTVTFEFDWKSGV 431 R L++T G+ ++ E+ G FAFT + + CF + D K GV Sbjct: 71 RSHLKITDSAGHILYSKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGV 130 Query: 430 TAKDWSNVAKKGKVDMMELELKKLEDTIQAIHXXXXXXXXXXXXMQNINRQTNSRMGWLS 251 AK++ +AK K+ +E+EL++LED ++I M++ N TN+R+ + S Sbjct: 131 EAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMEKREEEMRDTNESTNTRVLYFS 190 Query: 250 FLSLGICLSVAGLQLWHLKTFFERKKLL 167 S+ + +A Q+++L+ FF+ KKL+ Sbjct: 191 IFSMFCLIGLATWQVFYLRRFFKAKKLI 218
>TMEDA_HUMAN (P49755) Transmembrane emp24 domain-containing protein 10 precursor| (Transmembrane protein Tmp21) (21 kDa transmembrane trafficking protein) (p24delta) (S31III125) (S31I125) (Tmp-21-I) Length = 219 Score = 72.4 bits (176), Expect = 1e-12 Identities = 43/148 (29%), Positives = 76/148 (51%) Frame = -3 Query: 610 RVSLRVTSPYGNSMHYSENVQSGHFAFTAVEAGDYLACFWAPDHKPPVTVTFEFDWKSGV 431 R L++T G+ ++ E+ G FAFT + + CF + D K GV Sbjct: 71 RSHLKITDSAGHILYSKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGV 130 Query: 430 TAKDWSNVAKKGKVDMMELELKKLEDTIQAIHXXXXXXXXXXXXMQNINRQTNSRMGWLS 251 AK++ +AK K+ +E+EL++LED ++I M++ N TN+R+ + S Sbjct: 131 EAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFS 190 Query: 250 FLSLGICLSVAGLQLWHLKTFFERKKLL 167 S+ + +A Q+++L+ FF+ KKL+ Sbjct: 191 IFSMFCLIGLATWQVFYLRRFFKAKKLI 218
>TMEDA_FUGRU (Q90515) Transmembrane emp24 domain-containing protein 10 precursor| (Transmembrane protein Tmp21) (S31III125) Length = 213 Score = 69.7 bits (169), Expect = 7e-12 Identities = 40/144 (27%), Positives = 74/144 (51%) Frame = -3 Query: 598 RVTSPYGNSMHYSENVQSGHFAFTAVEAGDYLACFWAPDHKPPVTVTFEFDWKSGVTAKD 419 ++T ++++ E+ G FAFT + + CF + D K GV AK+ Sbjct: 69 KITDSSSHTLYSKEDATKGKFAFTTEDYDMFEVCFESKCTGRVPDQLVNLDMKHGVEAKN 128 Query: 418 WSNVAKKGKVDMMELELKKLEDTIQAIHXXXXXXXXXXXXMQNINRQTNSRMGWLSFLSL 239 + +AK K+ +E+EL++LED ++I M++ N TN+R+ + S S+ Sbjct: 129 YEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSM 188 Query: 238 GICLSVAGLQLWHLKTFFERKKLL 167 + +A Q+++L+ FF+ KKL+ Sbjct: 189 FCLIGLATWQVFYLRRFFKAKKLI 212
>TMED9_MOUSE (Q99KF1) Transmembrane emp24 domain-containing protein 9 precursor| (Glycoprotein 25L2) Length = 214 Score = 58.2 bits (139), Expect = 2e-08 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 4/130 (3%) Frame = -3 Query: 544 GHFAFTAVEAGDYLACFWAPDHKPPV----TVTFEFDWKSGVTAKDWSNVAKKGKVDMME 377 G F FT+ G++ C + K + + D + G A D++ +A K K+ ++ Sbjct: 85 GRFTFTSHTPGEHQICLHSNSTKFSLFAGGMLRVHLDIQVGEHANDYAEIAAKDKLSELQ 144 Query: 376 LELKKLEDTIQAIHXXXXXXXXXXXXMQNINRQTNSRMGWLSFLSLGICLSVAGLQLWHL 197 L +++L + ++ I + + TN R+ W S L I L++ Q+ HL Sbjct: 145 LRVRQLVEQVEQIQKEQNYQRWREERFRQTSESTNQRVLWWSVLQTLILLAIGVCQMRHL 204 Query: 196 KTFFERKKLL 167 K+FFE KKL+ Sbjct: 205 KSFFEAKKLV 214
>TMED9_BOVIN (Q3T133) Transmembrane emp24 domain-containing protein 9 precursor| Length = 235 Score = 57.0 bits (136), Expect = 5e-08 Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 4/130 (3%) Frame = -3 Query: 544 GHFAFTAVEAGDYLACFWAPDHKPPV----TVTFEFDWKSGVTAKDWSNVAKKGKVDMME 377 G F FT+ G++ C + K + + D + G A D++ +A K K+ ++ Sbjct: 106 GRFTFTSHTPGEHQICLHSNSTKFSLFAGGMLRVHLDIQVGEHANDYAEIAAKDKLSELQ 165 Query: 376 LELKKLEDTIQAIHXXXXXXXXXXXXMQNINRQTNSRMGWLSFLSLGICLSVAGLQLWHL 197 L +++L + ++ I + + TN R+ W S L I +++ Q+ HL Sbjct: 166 LRVRQLVEQVEQIQKEQNYQRWREERFRQTSESTNQRVLWWSILQTLILVAIGVWQMRHL 225 Query: 196 KTFFERKKLL 167 K+FFE KKL+ Sbjct: 226 KSFFEAKKLV 235
>TMED9_HUMAN (Q9BVK6) Transmembrane emp24 domain-containing protein 9 precursor| (Glycoprotein 25L2) Length = 214 Score = 57.0 bits (136), Expect = 5e-08 Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 4/130 (3%) Frame = -3 Query: 544 GHFAFTAVEAGDYLACFWAPDHKPPV----TVTFEFDWKSGVTAKDWSNVAKKGKVDMME 377 G F FT+ G++ C + K + + D + G A D++ +A K K+ ++ Sbjct: 85 GRFTFTSHTPGEHQICLHSNSTKFSLFAGGMLRVHLDIQVGEHANDYAEIAAKDKLSELQ 144 Query: 376 LELKKLEDTIQAIHXXXXXXXXXXXXMQNINRQTNSRMGWLSFLSLGICLSVAGLQLWHL 197 L +++L + ++ I + + TN R+ W S L I +++ Q+ HL Sbjct: 145 LRVRQLVEQVEQIQKEQNYQRWREERFRQTSESTNQRVLWWSILQTLILVAIGVWQMRHL 204 Query: 196 KTFFERKKLL 167 K+FFE KKL+ Sbjct: 205 KSFFEAKKLV 214
>ERV25_YEAST (P54837) Protein ERV25 precursor| Length = 211 Score = 54.7 bits (130), Expect = 2e-07 Identities = 38/161 (23%), Positives = 73/161 (45%), Gaps = 3/161 (1%) Frame = -3 Query: 640 YPDAQLPDSHRVSLRVTSPYGNSMHYSENVQSG-HFAFTAVEAGDYLACF--WAPDHKPP 470 + D + D +++L V GN + AFTA + + CF A Sbjct: 51 HSDGSVGDGQKLNLFVRDSVGNEYRRKRDFAGDVRVAFTAPSSTAFDVCFENQAQYRGRS 110 Query: 469 VTVTFEFDWKSGVTAKDWSNVAKKGKVDMMELELKKLEDTIQAIHXXXXXXXXXXXXMQN 290 ++ E D +SG A+DW+ ++ K+ +E+EL+++E+ I +++ Sbjct: 111 LSRAIELDIESGAEARDWNKISANEKLKPIEVELRRVEEITDEIVDELTYLKNREERLRD 170 Query: 289 INRQTNSRMGWLSFLSLGICLSVAGLQLWHLKTFFERKKLL 167 N TN R+ S L + + S+ Q+ +LK +F+ K ++ Sbjct: 171 TNESTNRRVRNFSILVIIVLSSLGVWQVNYLKNYFKTKHII 211
>TMED4_MOUSE (Q8R1V4) Transmembrane emp24 domain-containing protein 4 precursor| (p26) Length = 227 Score = 52.4 bits (124), Expect = 1e-06 Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 4/149 (2%) Frame = -3 Query: 601 LRVTSPYGNSMHYSENVQSGHFAFTAVEAGDYLACFWAPDHKPPV----TVTFEFDWKSG 434 + V P G + + G F FT+ GD+ C + + + + D + G Sbjct: 79 VEVKDPDGKVVLSRQYGSEGRFTFTSHTPGDHQICLHSNSTRMALFAGGKLRVHLDIQVG 138 Query: 433 VTAKDWSNVAKKGKVDMMELELKKLEDTIQAIHXXXXXXXXXXXXMQNINRQTNSRMGWL 254 A ++ +A K K+ ++L ++L D ++ I + + TN R+ W Sbjct: 139 EHANNYPEIAAKDKLTELQLRARQLLDQVEQIQKEQDYQRYREERFRLTSESTNQRVLWW 198 Query: 253 SFLSLGICLSVAGLQLWHLKTFFERKKLL 167 S I + Q+ HLK+FFE KKL+ Sbjct: 199 SIAQTVILILTGIWQMRHLKSFFEAKKLV 227
>TMED4_HUMAN (Q7Z7H5) Transmembrane emp24 domain-containing protein 4 precursor| Length = 227 Score = 52.4 bits (124), Expect = 1e-06 Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 4/149 (2%) Frame = -3 Query: 601 LRVTSPYGNSMHYSENVQSGHFAFTAVEAGDYLACFWAPDHKPPV----TVTFEFDWKSG 434 + V P G + + G F FT+ GD+ C + + + + D + G Sbjct: 79 VEVKDPDGKVVLSRQYGSEGRFTFTSHTPGDHQICLHSNSTRMALFAGGKLRVHLDIQVG 138 Query: 433 VTAKDWSNVAKKGKVDMMELELKKLEDTIQAIHXXXXXXXXXXXXMQNINRQTNSRMGWL 254 A ++ +A K K+ ++L ++L D ++ I + + TN R+ W Sbjct: 139 EHANNYPEIAAKDKLTELQLRARQLLDQVEQIQKEQDYQRYREERFRLTSESTNQRVLWW 198 Query: 253 SFLSLGICLSVAGLQLWHLKTFFERKKLL 167 S I + Q+ HLK+FFE KKL+ Sbjct: 199 SIAQTVILILTGIWQMRHLKSFFEAKKLV 227
>TMED2_RAT (Q63524) Transmembrane emp24 domain trafficking protein 2 precursor| (Membrane protein p24A) (RNP21.4) Length = 201 Score = 45.4 bits (106), Expect = 1e-04 Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 1/148 (0%) Frame = -3 Query: 607 VSLRVTSPYGNSMHYSENVQSGHFAFTAVEAGDYLACFW-APDHKPPVTVTFEFDWKSGV 431 + + +T P ++ + SG + F A G Y CF P V F D Sbjct: 57 IDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAP 116 Query: 430 TAKDWSNVAKKGKVDMMELELKKLEDTIQAIHXXXXXXXXXXXXMQNINRQTNSRMGWLS 251 +D A + K++ M + +L + A+ + IN TNSR+ S Sbjct: 117 KGQDMETEAHQNKLEEM---INELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWS 173 Query: 250 FLSLGICLSVAGLQLWHLKTFFERKKLL 167 F + +++ Q+++LK FFE ++++ Sbjct: 174 FFEALVLVAMTLGQIYYLKRFFEVRRVV 201
>TMED2_MOUSE (Q9R0Q3) Transmembrane emp24 domain trafficking protein 2 precursor| (Membrane protein p24A) (Sid 394) Length = 201 Score = 45.4 bits (106), Expect = 1e-04 Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 1/148 (0%) Frame = -3 Query: 607 VSLRVTSPYGNSMHYSENVQSGHFAFTAVEAGDYLACFW-APDHKPPVTVTFEFDWKSGV 431 + + +T P ++ + SG + F A G Y CF P V F D Sbjct: 57 IDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAP 116 Query: 430 TAKDWSNVAKKGKVDMMELELKKLEDTIQAIHXXXXXXXXXXXXMQNINRQTNSRMGWLS 251 +D A + K++ M + +L + A+ + IN TNSR+ S Sbjct: 117 KGQDMETEAHQNKLEEM---INELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWS 173 Query: 250 FLSLGICLSVAGLQLWHLKTFFERKKLL 167 F + +++ Q+++LK FFE ++++ Sbjct: 174 FFEALVLVAMTLGQIYYLKRFFEVRRVV 201
>TMED2_HUMAN (Q15363) Transmembrane emp24 domain trafficking protein 2 precursor| (Membrane protein p24A) Length = 201 Score = 45.4 bits (106), Expect = 1e-04 Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 1/148 (0%) Frame = -3 Query: 607 VSLRVTSPYGNSMHYSENVQSGHFAFTAVEAGDYLACFW-APDHKPPVTVTFEFDWKSGV 431 + + +T P ++ + SG + F A G Y CF P V F D Sbjct: 57 IDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAP 116 Query: 430 TAKDWSNVAKKGKVDMMELELKKLEDTIQAIHXXXXXXXXXXXXMQNINRQTNSRMGWLS 251 +D A + K++ M + +L + A+ + IN TNSR+ S Sbjct: 117 KGQDMETEAHQNKLEEM---INELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWS 173 Query: 250 FLSLGICLSVAGLQLWHLKTFFERKKLL 167 F + +++ Q+++LK FFE ++++ Sbjct: 174 FFEALVLVAMTLGQIYYLKRFFEVRRVV 201
>TMED2_CRIGR (P49020) Transmembrane emp24 domain trafficking protein 2 precursor| (COPI-coated vesicle membrane protein p24) (Fragment) Length = 196 Score = 45.4 bits (106), Expect = 1e-04 Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 1/148 (0%) Frame = -3 Query: 607 VSLRVTSPYGNSMHYSENVQSGHFAFTAVEAGDYLACFW-APDHKPPVTVTFEFDWKSGV 431 + + +T P ++ + SG + F A G Y CF P V F D Sbjct: 52 IDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAP 111 Query: 430 TAKDWSNVAKKGKVDMMELELKKLEDTIQAIHXXXXXXXXXXXXMQNINRQTNSRMGWLS 251 +D A + K++ M + +L + A+ + IN TNSR+ S Sbjct: 112 KGQDMETEAHQNKLEEM---INELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWS 168 Query: 250 FLSLGICLSVAGLQLWHLKTFFERKKLL 167 F + +++ Q+++LK FFE ++++ Sbjct: 169 FFEALVLVAMTLGQIYYLKRFFEVRRVV 196
>ERP6_YEAST (P53198) Protein ERP6 precursor| Length = 216 Score = 42.4 bits (98), Expect = 0.001 Identities = 34/168 (20%), Positives = 73/168 (43%), Gaps = 8/168 (4%) Frame = -3 Query: 646 PSYPDAQLPDSHRVSLRVTSPYGNSMH--YSENVQSGHFAFTAVEAGDYLACF------W 491 PSY D + + + V + N+ + + SG F+F A+E+G+Y C W Sbjct: 61 PSYND------YGIVIDVEEVFDNNHRVVHQQGSPSGDFSFLALESGEYKICLQSRVNNW 114 Query: 490 APDHKPPVTVTFEFDWKSGVTAKDWSNVAKKGKVDMMELELKKLEDTIQAIHXXXXXXXX 311 K + + FE +++ + ++ +K ++ + ++ L I I Sbjct: 115 VGKTKTKLEIEFEVGFEAML------DMQRKETLESLHGKVSILNSKIVDIRREQQLMRE 168 Query: 310 XXXXMQNINRQTNSRMGWLSFLSLGICLSVAGLQLWHLKTFFERKKLL 167 ++I+ NSR W + + + + + Q+ L++FF ++K+L Sbjct: 169 REESFRDISESVNSRAMWWTVTQVTLLIIICVWQMKSLRSFFVKQKVL 216
>G25L_MOUSE (Q9D2R4) Glycoprotein 25L precursor (GP25L)| Length = 215 Score = 41.6 bits (96), Expect = 0.002 Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 7/133 (5%) Frame = -3 Query: 544 GHFAFTAVEAGDYLACFWAPDHKPPVTVTF-------EFDWKSGVTAKDWSNVAKKGKVD 386 G F FT+ +G+++ C + V+F D + G D + V K KV+ Sbjct: 86 GTFYFTSHSSGEHIICL---ESNSTQFVSFGGSKLRIHLDIRVGEHDLDAAIVQAKDKVN 142 Query: 385 MMELELKKLEDTIQAIHXXXXXXXXXXXXMQNINRQTNSRMGWLSFLSLGICLSVAGLQL 206 + +L+ L + ++ I + + TN + W +F + I +SV Q+ Sbjct: 143 EVTFKLQHLIEQVEQILKEQDYQRDREENFRITSEDTNRNVLWWAFAQILIFISVGIFQM 202 Query: 205 WHLKTFFERKKLL 167 HLK FF KKL+ Sbjct: 203 KHLKDFFIAKKLV 215
>SEL9_CAEEL (O17528) Suppressor/enhancer of lin-12 protein 9 precursor| Length = 203 Score = 40.8 bits (94), Expect = 0.004 Identities = 36/153 (23%), Positives = 64/153 (41%), Gaps = 6/153 (3%) Frame = -3 Query: 607 VSLRVTSPYGNSMHYSENVQSGHFAFTAVEAGDYLACFWAP-DHKPPVTVTFEFD----W 443 + +++T P ++ E SG F F A G Y CF P V F + Sbjct: 55 IDVKITGPDNKEIYKGERESSGKFTFAAHMDGVYTYCFGNKMSTMTPKAVMFTVEITEPH 114 Query: 442 KSGVTAKDWSNVAKKGKVDMMELELKKLEDTIQAIHXXXXXXXXXXXXMQNINRQTNSR- 266 + A + A K++ M +++L + ++ +NIN TNSR Sbjct: 115 QQAPGAAANQDAADNAKLEEM---VRELSSALMSVKHEQEYMEVRERVHRNINENTNSRV 171 Query: 265 MGWLSFLSLGICLSVAGLQLWHLKTFFERKKLL 167 + W +F + + G Q+++LK FFE + ++ Sbjct: 172 VMWAAFEAFVLVGMTVG-QIFYLKRFFEVRTMV 203
>ERP5_YEAST (P38819) Protein ERP5 precursor| Length = 212 Score = 40.4 bits (93), Expect = 0.005 Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 3/134 (2%) Frame = -3 Query: 559 ENVQSGHFAFTAVEAGDYLACFWAPDHKPPVTVTFEFDWKSG-VTAKDWSNVAKKGKVDM 383 +N +G FTA++ G++ CF K T+ + + G V A D K K DM Sbjct: 84 KNSHTGDVTFTALDTGEHRFCFTPFYSKKSATLRVFIELEIGNVEALD-----SKKKEDM 138 Query: 382 MELE--LKKLEDTIQAIHXXXXXXXXXXXXMQNINRQTNSRMGWLSFLSLGICLSVAGLQ 209 L+ + +L + +I +N + NS++ S L I L Q Sbjct: 139 NSLKGRVGQLTQRLSSIRKEQDAIREKEAEFRNQSESANSKIMTWSVFQLLILLGTCAFQ 198 Query: 208 LWHLKTFFERKKLL 167 L +LK FF ++K++ Sbjct: 199 LRYLKNFFVKQKVV 212
>G25L_CANFA (P27869) Glycoprotein 25L precursor (GP25L)| Length = 215 Score = 37.7 bits (86), Expect = 0.030 Identities = 32/133 (24%), Positives = 57/133 (42%), Gaps = 7/133 (5%) Frame = -3 Query: 544 GHFAFTAVEAGDYLACFWAPDHKPPVTVTF-------EFDWKSGVTAKDWSNVAKKGKVD 386 G F FT+ G+++ C + + V+F + + G D + K KV+ Sbjct: 86 GRFYFTSHSPGEHIICLESNSTR---LVSFGGSKLRIHLEIRVGQHDLDAAIAQAKDKVN 142 Query: 385 MMELELKKLEDTIQAIHXXXXXXXXXXXXMQNINRQTNSRMGWLSFLSLGICLSVAGLQL 206 + +L+ L + I+ I + I+ TNS + W +F I +++ Q+ Sbjct: 143 EVSFKLEHLIEQIEQIVKEQNYQRDREENFRMISEDTNSNVLWWAFAQTLIFIAIGIFQM 202 Query: 205 WHLKTFFERKKLL 167 LK FF KKL+ Sbjct: 203 KSLKNFFIAKKLV 215
>YE98_SCHPO (O13770) Hypothetical protein C17A5.08 precursor| Length = 210 Score = 37.0 bits (84), Expect = 0.051 Identities = 32/150 (21%), Positives = 64/150 (42%), Gaps = 4/150 (2%) Frame = -3 Query: 616 SHRVSLRVTSPYGNSMHYSENVQSGHFAFTAVEAGDYLACFWAPDHKPPVT---VTFEFD 446 S V + +P ++ + + FT E G+Y CF +H T VT E Sbjct: 57 SFDVDYMIKAPSQKTVALGKKRRQADVFFTLEEKGEYEFCF--DNHMSTFTDKIVTMEIT 114 Query: 445 WKSGVTAKDWS-NVAKKGKVDMMELELKKLEDTIQAIHXXXXXXXXXXXXMQNINRQTNS 269 ++ ++ + + AK K D M+ + ++ + I + + T + Sbjct: 115 MENELSLPALTRDEAKDYKKDSMQSTVLEISTALSEIDRVQNYFKTREHRNYSTVKSTQA 174 Query: 268 RMGWLSFLSLGICLSVAGLQLWHLKTFFER 179 R+ W S + ++++ LQ++ +KTFF+R Sbjct: 175 RIFWFSLAESIMVVALSALQVFIVKTFFKR 204
>TMED7_HUMAN (Q9Y3B3) Transmembrane emp24 domain-containing protein 7 precursor| Length = 224 Score = 35.0 bits (79), Expect = 0.19 Identities = 31/145 (21%), Positives = 59/145 (40%) Frame = -3 Query: 607 VSLRVTSPYGNSMHYSENVQSGHFAFTAVEAGDYLACFWAPDHKPPVTVTFEFDWKSGVT 428 V R+ P G ++ Q F FTA + G Y CF + + T FD++ G Sbjct: 73 VDCRLEDPDGKVLYKEMKKQYDSFTFTASKNGTYKFCF-SNEFSTFTHKTVYFDFQVGED 131 Query: 427 AKDWSNVAKKGKVDMMELELKKLEDTIQAIHXXXXXXXXXXXXMQNINRQTNSRMGWLSF 248 + + + + ME + + ++++ ++ N+R+ + S Sbjct: 132 PPLFPSENRVSALTQMESACVSIHEALKSVIDYQTHFRLREAQGRSRAEDLNTRVAYWSV 191 Query: 247 LSLGICLSVAGLQLWHLKTFFERKK 173 I L V+ Q++ LK+FF K+ Sbjct: 192 GEALILLVVSIGQVFLLKSFFSDKR 216
>EMP24_YEAST (P32803) Endosomal P24B protein precursor (24 kDa endomembrane| protein) (Basic 24 kDa late endocytic intermediate component) Length = 203 Score = 33.9 bits (76), Expect = 0.43 Identities = 16/72 (22%), Positives = 33/72 (45%) Frame = -3 Query: 382 MELELKKLEDTIQAIHXXXXXXXXXXXXMQNINRQTNSRMGWLSFLSLGICLSVAGLQLW 203 ++ ++KL + + +N TN R+ W S LG+ ++ + Q++ Sbjct: 132 LDSAVRKLSKLTREVKDEQSYIVIRERTHRNTAESTNDRVKWWSIFQLGVVIANSLFQIY 191 Query: 202 HLKTFFERKKLL 167 +L+ FFE L+ Sbjct: 192 YLRRFFEVTSLV 203
>DHE3_PYRKO (O59650) Glutamate dehydrogenase (EC 1.4.1.3) (GDH)| Length = 420 Score = 32.0 bits (71), Expect = 1.6 Identities = 18/72 (25%), Positives = 30/72 (41%) Frame = -3 Query: 583 YGNSMHYSENVQSGHFAFTAVEAGDYLACFWAPDHKPPVTVTFEFDWKSGVTAKDWSNVA 404 YGN+ +Y + S F V D + PD PP ++ + G + KD Sbjct: 220 YGNAGYYLHKIMSEEFGMKVVAVSDSKGGIYNPDGLPPADEVLKWKKEHG-SVKDMPGTQ 278 Query: 403 KKGKVDMMELEL 368 +++ELE+ Sbjct: 279 NITNEELLELEV 290
>PBPC_ECOLI (P76577) Penicillin-binding protein 1C (PBP-1c) (PBP1c) [Includes:| Penicillin-insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Transpeptidase-like module] Length = 770 Score = 31.2 bits (69), Expect = 2.8 Identities = 16/40 (40%), Positives = 21/40 (52%) Frame = +2 Query: 416 PVLGRDAALPVELEGDGDGWLVVRRPEAGQVVPGLNSREG 535 P G DA LP++L G DG ++ R P A + L S G Sbjct: 682 PPYGHDAQLPLQLTGVRDGAIIKRLPGAAEATLPLQSSGG 721
>TAH18_EMENI (Q5BB41) Probable NADPH reductase tah18 (EC 1.-.-.-)| Length = 626 Score = 30.4 bits (67), Expect = 4.8 Identities = 18/39 (46%), Positives = 24/39 (61%) Frame = -2 Query: 305 GGNAEHQQADKLEDGVAEFPLAWHLLVRGRAAAVASEDL 189 GG A+HQ + LED V + P W L +R + A ASED+ Sbjct: 144 GGEADHQHSSGLEDDV-QLPPKWVLRLRDQEA--ASEDV 179 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 79,403,918 Number of Sequences: 219361 Number of extensions: 1511082 Number of successful extensions: 4493 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 4345 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4468 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6143359464 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
