ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd23i24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK064856.1| Oryza sativa (japonica cultivar-group) cDNA clon... 363 5e-97
2ref|XM_469483.1| Oryza sativa (japonica cultivar-group), mRNA 323 4e-85
3dbj|AK103821.1| Oryza sativa (japonica cultivar-group) cDNA clon... 315 1e-82
4dbj|AK104750.1| Oryza sativa (japonica cultivar-group) cDNA clon... 283 4e-73
5dbj|AK060138.1| Oryza sativa (japonica cultivar-group) cDNA clon... 283 4e-73
6gb|AY112156.1| Zea mays CL1582_10 mRNA sequence 214 3e-52
7gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome... 155 2e-34
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 139 1e-29
10gb|AC087797.5| Oryza sativa chromosome 3 BAC OSJNBb0022E02 genom... 139 1e-29
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
12ref|NM_126210.2| Arabidopsis thaliana phytanoyl-CoA dioxygenase ... 48 0.037
13gb|AY116965.1| Arabidopsis thaliana At2g01490/F2I9.11 mRNA, comp... 48 0.037
14gb|AY057710.1| Arabidopsis thaliana At2g01490/F2I9.11 mRNA, comp... 48 0.037
15gb|AY088080.1| Arabidopsis thaliana clone 41002 mRNA, complete s... 48 0.037
16emb|CR848758.7| Zebrafish DNA sequence from clone DKEY-223M17 in... 46 0.14
17emb|AL953855.9| Zebrafish DNA sequence from clone CH211-239F4 in... 44 0.57
18ref|XM_740608.1| Plasmodium chabaudi chabaudi hypothetical prote... 42 2.3
19emb|AL365227.19| Human DNA sequence from clone RP3-422A11 on chr... 42 2.3
20emb|AL031650.22|HS1018D12 Human DNA sequence from clone RP5-1018... 42 2.3
21gb|AC073533.19| Homo sapiens X BAC RP11-589J20 (Roswell Park Can... 42 2.3
22gb|AC147227.4| Mus musculus BAC clone RP23-153H22 from chromosom... 40 8.9
23emb|BX548040.19| Zebrafish DNA sequence from clone CH211-190L11 ... 40 8.9
24ref|XM_803514.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 8.9
25ref|XM_807963.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 8.9
26ref|XM_673131.1| Plasmodium berghei strain ANKA hypothetical pro... 40 8.9
27gb|CP000001.1| Bacillus cereus E33L, complete genome 40 8.9
28emb|AL589947.3| Human DNA sequence from clone RP11-127B16 on chr... 40 8.9
29emb|AL449103.15| Human DNA sequence from clone RP11-478B20 on ch... 40 8.9
30emb|AL445430.15| Human DNA sequence from clone RP11-716O23 on ch... 40 8.9
31emb|AL391839.9| Human DNA sequence from clone RP11-135A24 on chr... 40 8.9
32emb|AL390715.23| Human DNA sequence from clone RP11-167O6 on chr... 40 8.9
33gb|AC115873.8| Mus musculus, clone RP24-349F22, complete sequence 40 8.9
34emb|AL354654.15| Human DNA sequence from clone RP11-170N11 on ch... 40 8.9
35emb|AL158812.10| Human DNA sequence from clone RP11-157E11 on ch... 40 8.9
36gb|AC046136.12| Homo sapiens 3 BAC RP11-190P13 (Roswell Park Can... 40 8.9
37gb|AC163999.3| Mus musculus chromosome 15, clone RP24-387E19, co... 40 8.9
38emb|AL445066.1|TACID4 Thermoplasma acidophilum complete genome; ... 40 8.9
39emb|AL928631.4| Mouse DNA sequence from clone RP23-240K15 on chr... 40 8.9
40emb|AL592283.5| Mouse DNA sequence from clone RP23-386C23 on chr... 40 8.9
41gb|AC146630.25| Medicago truncatula clone mth2-7f22, complete se... 40 8.9
42gb|AC126779.19| Medicago truncatula clone mth2-34m14, complete s... 40 8.9
43gb|AC105925.5| Homo sapiens BAC clone RP11-753I4 from 4, complet... 40 8.9
44gb|AC103833.2| Homo sapiens chromosome 8, clone RP11-1057N3, com... 40 8.9
45gb|AC159320.3| Mus musculus BAC clone RP23-51A12 from chromosome... 40 8.9
46gb|AC156567.3| Mus musculus BAC clone RP23-333F2 from chromosome... 40 8.9
47gb|AC159625.2| Mus musculus BAC clone RP24-262L7 from chromosome... 40 8.9
48gb|AC022257.19| Homo sapiens chromosome 8, clone RP11-715M14, co... 40 8.9
49dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
50dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
51gb|AC001231.3| Homo sapiens chromosome 17, clone CTB-44J6, compl... 40 8.9
52gb|AC138123.2| Homo sapiens 12 BAC RP11-202G11 (Roswell Park Can... 40 8.9
53gb|AC126684.4| Mus musculus BAC clone RP23-68L2 from chromosome ... 40 8.9
54dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
55gb|AC005774.1|AC005774 Homo sapiens chromosome 16, BAC clone 26O... 40 8.9
56gb|AY108645.1| Zea mays PCO071128 mRNA sequence 40 8.9
57emb|BX537934.1|HSM806056 Homo sapiens mRNA; cDNA DKFZp686E0831 (... 40 8.9
58gb|AC161242.2| Mus musculus BAC clone RP24-200E4 from chromosome... 40 8.9
59gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome 40 8.9
60gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.9
61emb|AL772423.4|CNS08CA1 Oryza sativa chromosome 12, . BAC OJ1058... 40 8.9
62emb|AL772427.4|CNS08CA5 Oryza sativa chromosome 12, . BAC OJ1260... 40 8.9
63dbj|AP006683.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 8.9
64dbj|AP004908.1| Lotus japonicus genomic DNA, chromosome 6, clone... 40 8.9 
>dbj|AK064856.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000H11, full
            insert sequence
          Length = 1588

 Score =  363 bits (183), Expect = 5e-97
 Identities = 361/423 (85%)
 Strand = Plus / Minus

                                                                        
Query: 207  ttttcctctgtatccagttatccttggaccatttacatccttccatgtcaactacatgca 266
            ||||||| |||| |||||| |  |||||||||| |||||||||  | |||| |||||| |
Sbjct: 1425 ttttcctttgtaaccagttttgtttggaccattcacatccttcggtatcaattacatgta 1366

                                                                        
Query: 267  agctcagtgcatgtcttgagactggagaaaggttctcgaagctctgatgtacaagatcac 326
            ||||||||||||||||||| ||  ||||||| || || |||||||| ||||||||||| |
Sbjct: 1365 agctcagtgcatgtcttgacaccagagaaagattttcaaagctctggtgtacaagatctc 1306

                                                                        
Query: 327  catgaataacaacaaagtcacctgatttcatttccagtggtacaaactctttctgatcat 386
            |||||||||| || || |||||||| || | ||| | ||| ||||| |||||| ||||||
Sbjct: 1305 catgaataaccaccaaatcacctgactttacttctaatggcacaaattctttcagatcat 1246

                                                                        
Query: 387  aaagcggggagggacgatcaaaatgagtgccattttcatccctgatcattcgccttttca 446
            |    || || ||| |||||||||||||  |||||||||| |||||||||||||||||||
Sbjct: 1245 aggttggcgaaggatgatcaaaatgagtatcattttcatctctgatcattcgccttttca 1186

                                                                        
Query: 447  aaccatttttatgtgatccgggaattgcccataggcaaccattggttgttgttgcatctt 506
             |||||||||||||||||| ||||||||||||||||||||||| ||| |||| |||||||
Sbjct: 1185 gaccatttttatgtgatccaggaattgcccataggcaaccattcgtttttgtcgcatctt 1126

                                                                        
Query: 507  caagcgcaagccacaatcctgtgcangacagaggctctgtataaagaaatgtattatnct 566
            | || ||||||||||| |||||||| ||  |||| | |||||| || |||||||||| ||
Sbjct: 1125 cgagtgcaagccacaaccctgtgcatgatggagggtttgtatataggaatgtattatcct 1066

                                                                        
Query: 567  ggtgtggcaccacctnnncaccaatgcctggntgnttaaagatgtacatanattgaataa 626
            |||||||||||||||   ||||||||||||| || ||||||||||||||| |||||||||
Sbjct: 1065 ggtgtggcaccacctcgccaccaatgcctggttgcttaaagatgtacatagattgaataa 1006

               
Query: 627  ctg 629
            |||
Sbjct: 1005 ctg 1003
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>ref|XM_469483.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1102

 Score =  323 bits (163), Expect = 4e-85
 Identities = 356/423 (84%)
 Strand = Plus / Minus

                                                                       
Query: 207 ttttcctctgtatccagttatccttggaccatttacatccttccatgtcaactacatgca 266
           ||||||| |||| |||||| | ||||||||||| |||||||||  | |||| |||||| |
Sbjct: 869 ttttcctttgtaaccagttttgcttggaccattcacatccttcggtatcaattacatgta 810

                                                                       
Query: 267 agctcagtgcatgtcttgagactggagaaaggttctcgaagctctgatgtacaagatcac 326
           ||||||||||||||||||| || |||||||| || || |||||||| |||| |||||| |
Sbjct: 809 agctcagtgcatgtcttgacaccggagaaagattttcaaagctctggtgtataagatctc 750

                                                                       
Query: 327 catgaataacaacaaagtcacctgatttcatttccagtggtacaaactctttctgatcat 386
           |||||||||| || || |||||||| || | ||| |  || ||||| |||||| ||||||
Sbjct: 749 catgaataaccaccaaatcacctgactttacttctaagggcacaaattctttcagatcat 690

                                                                       
Query: 387 aaagcggggagggacgatcaaaatgagtgccattttcatccctgatcattcgccttttca 446
           |    || || ||| |||||||||||||  |  ||||||| |||||||||||||||||||
Sbjct: 689 aggttggcgaaggatgatcaaaatgagtatcgatttcatctctgatcattcgccttttca 630

                                                                       
Query: 447 aaccatttttatgtgatccgggaattgcccataggcaaccattggttgttgttgcatctt 506
             ||||||||||||||||| ||||||||||| ||||||||||| ||| |||| |||||||
Sbjct: 629 ggccatttttatgtgatccaggaattgcccaaaggcaaccattcgtttttgtcgcatctt 570

                                                                       
Query: 507 caagcgcaagccacaatcctgtgcangacagaggctctgtataaagaaatgtattatnct 566
           | || ||||||||||  |||||||| ||  |||| |||||||| || |||||||||| ||
Sbjct: 569 cgagtgcaagccacagccctgtgcacgatggagggtctgtatataggaatgtattatcct 510

                                                                       
Query: 567 ggtgtggcaccacctnnncaccaatgcctggntgnttaaagatgtacatanattgaataa 626
           ||||||| |||||||   ||||||||||||| || ||||||||||||||| |||||||||
Sbjct: 509 ggtgtggtaccacctcgccaccaatgcctggttgcttaaagatgtacatagattgaataa 450

              
Query: 627 ctg 629
           |||
Sbjct: 449 ctg 447
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>dbj|AK103821.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147H12, full
           insert sequence
          Length = 1230

 Score =  315 bits (159), Expect = 1e-82
 Identities = 355/423 (83%)
 Strand = Plus / Minus

                                                                       
Query: 207 ttttcctctgtatccagttatccttggaccatttacatccttccatgtcaactacatgca 266
           ||||||| |||| |||||| | ||||||||||| |||||||||  | |||| |||||| |
Sbjct: 882 ttttcctttgtaaccagttttgcttggaccattcacatccttcggtatcaattacatgta 823

                                                                       
Query: 267 agctcagtgcatgtcttgagactggagaaaggttctcgaagctctgatgtacaagatcac 326
           ||||||||||||||||||| || |||||||| || || |||||||| |||| |||||| |
Sbjct: 822 agctcagtgcatgtcttgacaccggagaaagattttcaaagctctggtgtataagatctc 763

                                                                       
Query: 327 catgaataacaacaaagtcacctgatttcatttccagtggtacaaactctttctgatcat 386
           |||||||||| || || |||||||| || | ||| |  || ||||| |||||| ||||||
Sbjct: 762 catgaataaccaccaaatcacctgactttacttctaagggcacaaattctttcagatcat 703

                                                                       
Query: 387 aaagcggggagggacgatcaaaatgagtgccattttcatccctgatcattcgccttttca 446
           |    || || ||| |||||||||||||  |  ||||||| |||||||||||||||||||
Sbjct: 702 aggttggcgaaggatgatcaaaatgagtatcgatttcatctctgatcattcgccttttca 643

                                                                       
Query: 447 aaccatttttatgtgatccgggaattgcccataggcaaccattggttgttgttgcatctt 506
             ||||||||||||||||| ||||||||||| ||||||||||| ||| |||| |||||||
Sbjct: 642 ggccatttttatgtgatccaggaattgcccaaaggcaaccattcgtttttgtcgcatctt 583

                                                                       
Query: 507 caagcgcaagccacaatcctgtgcangacagaggctctgtataaagaaatgtattatnct 566
           | || ||||||||||  || ||||| ||  |||| |||||||| || |||||||||| ||
Sbjct: 582 cgagtgcaagccacagcccagtgcacgatggagggtctgtatataggaatgtattatcct 523

                                                                       
Query: 567 ggtgtggcaccacctnnncaccaatgcctggntgnttaaagatgtacatanattgaataa 626
           ||||||| |||||||   ||||||||||||| || ||||||||||||||| |||||||||
Sbjct: 522 ggtgtggtaccacctcgccaccaatgcctggttgcttaaagatgtacatagattgaataa 463

              
Query: 627 ctg 629
           |||
Sbjct: 462 ctg 460
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>dbj|AK104750.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-F05, full
           insert sequence
          Length = 1089

 Score =  283 bits (143), Expect = 4e-73
 Identities = 351/423 (82%), Gaps = 7/423 (1%)
 Strand = Plus / Minus

                                                                       
Query: 207 ttttcctctgtatccagttatccttggaccatttacatccttccatgtcaactacatgca 266
           ||||||| |||| |||||| | ||||||||||| |||||||||  | |||| |||||| |
Sbjct: 851 ttttcctttgtaaccagttttgcttggaccattcacatccttcggtatcaattacatgta 792

                                                                       
Query: 267 agctcagtgcatgtcttgagactggagaaaggttctcgaagctctgatgtacaagatcac 326
           ||||||||||||||||||| || |||||||| || || |||||||| |||| |||||| |
Sbjct: 791 agctcagtgcatgtcttgacaccggagaaagattttcaaagctctggtgtataagatctc 732

                                                                       
Query: 327 catgaataacaacaaagtcacctgatttcatttccagtggtacaaactctttctgatcat 386
           |||||||||| || || |||||||| || | ||| |  || ||||| |||||| ||||||
Sbjct: 731 catgaataaccaccaaatcacctgactttacttctaagggcacaaattctttcagatcat 672

                                                                       
Query: 387 aaagcggggagggacgatcaaaatgagtgccattttcatccctgatcattcgccttttca 446
           |    || || ||| |||||||||||||  |  ||||||| |||||||||||||||||||
Sbjct: 671 aggttggcgaaggatgatcaaaatgagtatcgatttcatctctgatcattcgccttttca 612

                                                                       
Query: 447 aaccatttttatgtgatccgggaattgcccataggcaaccattggttgttgttgcatctt 506
             ||||||||||||||||| ||||||||||| ||||||||||| ||| |||| |||||||
Sbjct: 611 ggccatttttatgtgatccaggaattgcccaaaggcaaccattcgtttttgtcgcatctt 552

                                                                       
Query: 507 caagcgcaagccacaatcctgtgcangacagaggctctgtataaagaaatgtattatnct 566
           | || ||||||||||  |||||||| ||  |||| |||||||| || |||||||||| ||
Sbjct: 551 cgagtgcaagccacagccctgtgcacgatggagggtctgtatataggaatgtattatcct 492

                                                                       
Query: 567 ggtgtggcaccacctnnncaccaatgcctggntgnttaaagatgtacatanattgaataa 626
           ||||||| |||||||   ||||||||||       ||||||||||||||| |||||||||
Sbjct: 491 ggtgtggtaccacctcgccaccaatgcc-------ttaaagatgtacatagattgaataa 439

              
Query: 627 ctg 629
           |||
Sbjct: 438 ctg 436
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>dbj|AK060138.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-E10, full
           insert sequence
          Length = 1089

 Score =  283 bits (143), Expect = 4e-73
 Identities = 351/423 (82%), Gaps = 7/423 (1%)
 Strand = Plus / Minus

                                                                       
Query: 207 ttttcctctgtatccagttatccttggaccatttacatccttccatgtcaactacatgca 266
           ||||||| |||| |||||| | ||||||||||| |||||||||  | |||| |||||| |
Sbjct: 851 ttttcctttgtaaccagttttgcttggaccattcacatccttcggtatcaattacatgta 792

                                                                       
Query: 267 agctcagtgcatgtcttgagactggagaaaggttctcgaagctctgatgtacaagatcac 326
           ||||||||||||||||||| || |||||||| || || |||||||| |||| |||||| |
Sbjct: 791 agctcagtgcatgtcttgacaccggagaaagattttcaaagctctggtgtataagatctc 732

                                                                       
Query: 327 catgaataacaacaaagtcacctgatttcatttccagtggtacaaactctttctgatcat 386
           |||||||||| || || |||||||| || | ||| |  || ||||| |||||| ||||||
Sbjct: 731 catgaataaccaccaaatcacctgactttacttctaagggcacaaattctttcagatcat 672

                                                                       
Query: 387 aaagcggggagggacgatcaaaatgagtgccattttcatccctgatcattcgccttttca 446
           |    || || ||| |||||||||||||  |  ||||||| |||||||||||||||||||
Sbjct: 671 aggttggcgaaggatgatcaaaatgagtatcgatttcatctctgatcattcgccttttca 612

                                                                       
Query: 447 aaccatttttatgtgatccgggaattgcccataggcaaccattggttgttgttgcatctt 506
             ||||||||||||||||| ||||||||||| ||||||||||| ||| |||| |||||||
Sbjct: 611 ggccatttttatgtgatccaggaattgcccaaaggcaaccattcgtttttgtcgcatctt 552

                                                                       
Query: 507 caagcgcaagccacaatcctgtgcangacagaggctctgtataaagaaatgtattatnct 566
           | || ||||||||||  |||||||| ||  |||| |||||||| || |||||||||| ||
Sbjct: 551 cgagtgcaagccacagccctgtgcacgatggagggtctgtatataggaatgtattatcct 492

                                                                       
Query: 567 ggtgtggcaccacctnnncaccaatgcctggntgnttaaagatgtacatanattgaataa 626
           ||||||| |||||||   ||||||||||       ||||||||||||||| |||||||||
Sbjct: 491 ggtgtggtaccacctcgccaccaatgcc-------ttaaagatgtacatagattgaataa 439

              
Query: 627 ctg 629
           |||
Sbjct: 438 ctg 436
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>gb|AY112156.1| Zea mays CL1582_10 mRNA sequence
          Length = 891

 Score =  214 bits (108), Expect = 3e-52
 Identities = 320/393 (81%)
 Strand = Plus / Plus

                                                                       
Query: 178 ctaagacacatacagtggttcgggcgcagttttcctctgtatccagttatccttggacca 237
           |||||||||||| || ||||| || || |||||||| ||||||||||| || | ||||||
Sbjct: 327 ctaagacacatagagcggttcaggggccgttttcctttgtatccagttgtcttcggacca 386

                                                                       
Query: 238 tttacatccttccatgtcaactacatgcaagctcagtgcatgtcttgagactggagaaag 297
           ||||||||||||  | || |||||||| ||||| | ||||||||||||  | ||||||||
Sbjct: 387 tttacatccttcagtatccactacatgtaagctgaatgcatgtcttgacgcaggagaaag 446

                                                                       
Query: 298 gttctcgaagctctgatgtacaagatcaccatgaataacaacaaagtcacctgatttcat 357
            ||||| || |||||||||| |||||| ||||| ||||| || ||  |||| ||||| | 
Sbjct: 447 attctcaaaactctgatgtataagatctccatggataaccaccaaagcaccagattttac 506

                                                                       
Query: 358 ttccagtggtacaaactctttctgatcataaagcggggagggacgatcaaaatgagtgcc 417
           |||||| |||||||| |||||||| |||||    |||||||| | ||||||||| || ||
Sbjct: 507 ttccagcggtacaaattctttctggtcataggctggggaggggcaatcaaaatgtgtacc 566

                                                                       
Query: 418 attttcatccctgatcattcgccttttcaaaccatttttatgtgatccgggaattgccca 477
           ||||||||| |||||||| |||||   ||||||      |||||| || ||||| |||||
Sbjct: 567 attttcatctctgatcatacgcctcaccaaacccnnnnnatgtgagcctggaatggccca 626

                                                                       
Query: 478 taggcaaccattggttgttgttgcatcttcaagcgcaagccacaatcctgtgcangacag 537
            |||||||||||| |  |||||||||||||||| ||||||||||| |||||||| |    
Sbjct: 627 caggcaaccattgttgattgttgcatcttcaagtgcaagccacaaccctgtgcatgttca 686

                                            
Query: 538 aggctctgtataaagaaatgtattatnctggtg 570
           ||| || || ||||| |||||||||| ||||||
Sbjct: 687 aggttccgtgtaaaggaatgtattatcctggtg 719
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>gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0486C01,
             complete sequence
          Length = 146432

 Score =  155 bits (78), Expect = 2e-34
 Identities = 127/145 (87%)
 Strand = Plus / Plus

                                                                         
Query: 453   ttttatgtgatccgggaattgcccataggcaaccattggttgttgttgcatcttcaagcg 512
             ||||||||||||| ||||||||||||||||||||||| ||| |||| |||||||| || |
Sbjct: 61312 ttttatgtgatccaggaattgcccataggcaaccattcgtttttgtcgcatcttcgagtg 61371

                                                                         
Query: 513   caagccacaatcctgtgcangacagaggctctgtataaagaaatgtattatnctggtgtg 572
             |||||||||| |||||||| ||  |||| | |||||| || |||||||||| ||||||||
Sbjct: 61372 caagccacaaccctgtgcatgatggagggtttgtatataggaatgtattatcctggtgtg 61431

                                      
Query: 573   gcaccacctnnncaccaatgcctgg 597
             |||||||||   |||||||||||||
Sbjct: 61432 gcaccacctcgccaccaatgcctgg 61456



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 121/145 (83%)
 Strand = Plus / Plus

                                                                         
Query: 308   ctctgatgtacaagatcaccatgaataacaacaaagtcacctgatttcatttccagtggt 367
             ||||| ||||||||||| ||||||||||| || || |||||||| || | ||| | ||| 
Sbjct: 61074 ctctggtgtacaagatctccatgaataaccaccaaatcacctgactttacttctaatggc 61133

                                                                         
Query: 368   acaaactctttctgatcataaagcggggagggacgatcaaaatgagtgccattttcatcc 427
             ||||| |||||| |||||||    || || ||| |||||||||||||  |||||||||| 
Sbjct: 61134 acaaattctttcagatcataggttggcgaaggatgatcaaaatgagtatcattttcatct 61193

                                      
Query: 428   ctgatcattcgccttttcaaaccat 452
             ||||||||||||||||||| |||||
Sbjct: 61194 ctgatcattcgccttttcagaccat 61218



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                     
Query: 230   ttggaccatttacatccttccatgtcaactacatgcaagctcagtgcatgtcttga 285
             |||||||||| |||||||||  | |||| |||||| ||||||||||||||||||||
Sbjct: 60914 ttggaccattcacatccttcggtatcaattacatgtaagctcagtgcatgtcttga 60969



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 602   ttaaagatgtacatanattgaataactg 629
             ||||||||||||||| ||||||||||||
Sbjct: 61542 ttaaagatgtacatagattgaataactg 61569
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  155 bits (78), Expect = 2e-34
 Identities = 127/145 (87%)
 Strand = Plus / Plus

                                                                            
Query: 453      ttttatgtgatccgggaattgcccataggcaaccattggttgttgttgcatcttcaagcg 512
                ||||||||||||| ||||||||||||||||||||||| ||| |||| |||||||| || |
Sbjct: 23129537 ttttatgtgatccaggaattgcccataggcaaccattcgtttttgtcgcatcttcgagtg 23129596

                                                                            
Query: 513      caagccacaatcctgtgcangacagaggctctgtataaagaaatgtattatnctggtgtg 572
                |||||||||| |||||||| ||  |||| | |||||| || |||||||||| ||||||||
Sbjct: 23129597 caagccacaaccctgtgcatgatggagggtttgtatataggaatgtattatcctggtgtg 23129656

                                         
Query: 573      gcaccacctnnncaccaatgcctgg 597
                |||||||||   |||||||||||||
Sbjct: 23129657 gcaccacctcgccaccaatgcctgg 23129681



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 121/145 (83%)
 Strand = Plus / Plus

                                                                            
Query: 308      ctctgatgtacaagatcaccatgaataacaacaaagtcacctgatttcatttccagtggt 367
                ||||| ||||||||||| ||||||||||| || || |||||||| || | ||| | ||| 
Sbjct: 23129299 ctctggtgtacaagatctccatgaataaccaccaaatcacctgactttacttctaatggc 23129358

                                                                            
Query: 368      acaaactctttctgatcataaagcggggagggacgatcaaaatgagtgccattttcatcc 427
                ||||| |||||| |||||||    || || ||| |||||||||||||  |||||||||| 
Sbjct: 23129359 acaaattctttcagatcataggttggcgaaggatgatcaaaatgagtatcattttcatct 23129418

                                         
Query: 428      ctgatcattcgccttttcaaaccat 452
                ||||||||||||||||||| |||||
Sbjct: 23129419 ctgatcattcgccttttcagaccat 23129443



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                        
Query: 230      ttggaccatttacatccttccatgtcaactacatgcaagctcagtgcatgtcttga 285
                |||||||||| |||||||||  | |||| |||||| ||||||||||||||||||||
Sbjct: 23129139 ttggaccattcacatccttcggtatcaattacatgtaagctcagtgcatgtcttga 23129194



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 602      ttaaagatgtacatanattgaataactg 629
                ||||||||||||||| ||||||||||||
Sbjct: 23129767 ttaaagatgtacatagattgaataactg 23129794
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  139 bits (70), Expect = 1e-29
 Identities = 125/145 (86%)
 Strand = Plus / Plus

                                                                            
Query: 453      ttttatgtgatccgggaattgcccataggcaaccattggttgttgttgcatcttcaagcg 512
                ||||||||||||| ||||||||||| ||||||||||| ||| |||| |||||||| || |
Sbjct: 28258554 ttttatgtgatccaggaattgcccaaaggcaaccattcgtttttgtcgcatcttcgagtg 28258613

                                                                            
Query: 513      caagccacaatcctgtgcangacagaggctctgtataaagaaatgtattatnctggtgtg 572
                |||||||||  |||||||| ||  |||| |||||||| || |||||||||| ||||||||
Sbjct: 28258614 caagccacagccctgtgcacgatggagggtctgtatataggaatgtattatcctggtgtg 28258673

                                         
Query: 573      gcaccacctnnncaccaatgcctgg 597
                | |||||||   |||||||||||||
Sbjct: 28258674 gtaccacctcgccaccaatgcctgg 28258698



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                            
Query: 220      ccagttatccttggaccatttacatccttccatgtcaactacatgcaagctcagtgcatg 279
                |||||| | ||||||||||| |||||||||  | |||| |||||| ||||||||||||||
Sbjct: 28258146 ccagttttgcttggaccattcacatccttcggtatcaattacatgtaagctcagtgcatg 28258205

                                  
Query: 280      tcttgagactggagaaag 297
                |||||| || ||||||||
Sbjct: 28258206 tcttgacaccggagaaag 28258223



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 112/139 (80%)
 Strand = Plus / Plus

                                                                            
Query: 308      ctctgatgtacaagatcaccatgaataacaacaaagtcacctgatttcatttccagtggt 367
                ||||| |||| |||||| ||||||||||| || || |||||||| || | ||| |  || 
Sbjct: 28258316 ctctggtgtataagatctccatgaataaccaccaaatcacctgactttacttctaagggc 28258375

                                                                            
Query: 368      acaaactctttctgatcataaagcggggagggacgatcaaaatgagtgccattttcatcc 427
                ||||| |||||| |||||||    || || ||| |||||||||||||  |  ||||||| 
Sbjct: 28258376 acaaattctttcagatcataggttggcgaaggatgatcaaaatgagtatcgatttcatct 28258435

                                   
Query: 428      ctgatcattcgccttttca 446
                |||||||||||||||||||
Sbjct: 28258436 ctgatcattcgccttttca 28258454



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 602      ttaaagatgtacatanattgaataactg 629
                ||||||||||||||| ||||||||||||
Sbjct: 28258784 ttaaagatgtacatagattgaataactg 28258811
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>gb|AC087797.5| Oryza sativa chromosome 3 BAC OSJNBb0022E02 genomic sequence, complete
              sequence
          Length = 122497

 Score =  139 bits (70), Expect = 1e-29
 Identities = 125/145 (86%)
 Strand = Plus / Plus

                                                                          
Query: 453    ttttatgtgatccgggaattgcccataggcaaccattggttgttgttgcatcttcaagcg 512
              ||||||||||||| ||||||||||| ||||||||||| ||| |||| |||||||| || |
Sbjct: 109695 ttttatgtgatccaggaattgcccaaaggcaaccattcgtttttgtcgcatcttcgagtg 109754

                                                                          
Query: 513    caagccacaatcctgtgcangacagaggctctgtataaagaaatgtattatnctggtgtg 572
              |||||||||  |||||||| ||  |||| |||||||| || |||||||||| ||||||||
Sbjct: 109755 caagccacagccctgtgcacgatggagggtctgtatataggaatgtattatcctggtgtg 109814

                                       
Query: 573    gcaccacctnnncaccaatgcctgg 597
              | |||||||   |||||||||||||
Sbjct: 109815 gtaccacctcgccaccaatgcctgg 109839



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                          
Query: 220    ccagttatccttggaccatttacatccttccatgtcaactacatgcaagctcagtgcatg 279
              |||||| | ||||||||||| |||||||||  | |||| |||||| ||||||||||||||
Sbjct: 109287 ccagttttgcttggaccattcacatccttcggtatcaattacatgtaagctcagtgcatg 109346

                                
Query: 280    tcttgagactggagaaag 297
              |||||| || ||||||||
Sbjct: 109347 tcttgacaccggagaaag 109364



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 112/139 (80%)
 Strand = Plus / Plus

                                                                          
Query: 308    ctctgatgtacaagatcaccatgaataacaacaaagtcacctgatttcatttccagtggt 367
              ||||| |||| |||||| ||||||||||| || || |||||||| || | ||| |  || 
Sbjct: 109457 ctctggtgtataagatctccatgaataaccaccaaatcacctgactttacttctaagggc 109516

                                                                          
Query: 368    acaaactctttctgatcataaagcggggagggacgatcaaaatgagtgccattttcatcc 427
              ||||| |||||| |||||||    || || ||| |||||||||||||  |  ||||||| 
Sbjct: 109517 acaaattctttcagatcataggttggcgaaggatgatcaaaatgagtatcgatttcatct 109576

                                 
Query: 428    ctgatcattcgccttttca 446
              |||||||||||||||||||
Sbjct: 109577 ctgatcattcgccttttca 109595



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 602    ttaaagatgtacatanattgaataactg 629
              ||||||||||||||| ||||||||||||
Sbjct: 109925 ttaaagatgtacatagattgaataactg 109952
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  139 bits (70), Expect = 1e-29
 Identities = 125/145 (86%)
 Strand = Plus / Plus

                                                                            
Query: 453      ttttatgtgatccgggaattgcccataggcaaccattggttgttgttgcatcttcaagcg 512
                ||||||||||||| ||||||||||| ||||||||||| ||| |||| |||||||| || |
Sbjct: 28349878 ttttatgtgatccaggaattgcccaaaggcaaccattcgtttttgtcgcatcttcgagtg 28349937

                                                                            
Query: 513      caagccacaatcctgtgcangacagaggctctgtataaagaaatgtattatnctggtgtg 572
                |||||||||  |||||||| ||  |||| |||||||| || |||||||||| ||||||||
Sbjct: 28349938 caagccacagccctgtgcacgatggagggtctgtatataggaatgtattatcctggtgtg 28349997

                                         
Query: 573      gcaccacctnnncaccaatgcctgg 597
                | |||||||   |||||||||||||
Sbjct: 28349998 gtaccacctcgccaccaatgcctgg 28350022



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                            
Query: 220      ccagttatccttggaccatttacatccttccatgtcaactacatgcaagctcagtgcatg 279
                |||||| | ||||||||||| |||||||||  | |||| |||||| ||||||||||||||
Sbjct: 28349470 ccagttttgcttggaccattcacatccttcggtatcaattacatgtaagctcagtgcatg 28349529

                                  
Query: 280      tcttgagactggagaaag 297
                |||||| || ||||||||
Sbjct: 28349530 tcttgacaccggagaaag 28349547



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 112/139 (80%)
 Strand = Plus / Plus

                                                                            
Query: 308      ctctgatgtacaagatcaccatgaataacaacaaagtcacctgatttcatttccagtggt 367
                ||||| |||| |||||| ||||||||||| || || |||||||| || | ||| |  || 
Sbjct: 28349640 ctctggtgtataagatctccatgaataaccaccaaatcacctgactttacttctaagggc 28349699

                                                                            
Query: 368      acaaactctttctgatcataaagcggggagggacgatcaaaatgagtgccattttcatcc 427
                ||||| |||||| |||||||    || || ||| |||||||||||||  |  ||||||| 
Sbjct: 28349700 acaaattctttcagatcataggttggcgaaggatgatcaaaatgagtatcgatttcatct 28349759

                                   
Query: 428      ctgatcattcgccttttca 446
                |||||||||||||||||||
Sbjct: 28349760 ctgatcattcgccttttca 28349778



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 602      ttaaagatgtacatanattgaataactg 629
                ||||||||||||||| ||||||||||||
Sbjct: 28350108 ttaaagatgtacatagattgaataactg 28350135
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>ref|NM_126210.2| Arabidopsis thaliana phytanoyl-CoA dioxygenase AT2G01490 mRNA,
           complete cds
          Length = 1136

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 446 aaaccatttttatgtgatccgggaattgcccataggcaaccatt 489
           |||||||| ||||| ||||| ||||||||||| || ||||||||
Sbjct: 645 aaaccattcttatgagatccaggaattgcccaaagacaaccatt 602
to top
>gb|AY116965.1| Arabidopsis thaliana At2g01490/F2I9.11 mRNA, complete cds
          Length = 852

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 446 aaaccatttttatgtgatccgggaattgcccataggcaaccatt 489
           |||||||| ||||| ||||| ||||||||||| || ||||||||
Sbjct: 581 aaaccattcttatgagatccaggaattgcccaaagacaaccatt 538
to top
>gb|AY057710.1| Arabidopsis thaliana At2g01490/F2I9.11 mRNA, complete cds
          Length = 1029

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 446 aaaccatttttatgtgatccgggaattgcccataggcaaccatt 489
           |||||||| ||||| ||||| ||||||||||| || ||||||||
Sbjct: 601 aaaccattcttatgagatccaggaattgcccaaagacaaccatt 558
to top
>gb|AY088080.1| Arabidopsis thaliana clone 41002 mRNA, complete sequence
          Length = 1131

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 446 aaaccatttttatgtgatccgggaattgcccataggcaaccatt 489
           |||||||| ||||| ||||| ||||||||||| || ||||||||
Sbjct: 645 aaaccattcttatgagatccaggaattgcccaaagacaaccatt 602
to top
>emb|CR848758.7| Zebrafish DNA sequence from clone DKEY-223M17 in linkage group 16,
             complete sequence
          Length = 71197

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 61    gaaagagaatgaagaaaaaacagcatt 87
             ||||||||||||| |||||||||||||
Sbjct: 68919 gaaagagaatgaaaaaaaaacagcatt 68893
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>emb|AL953855.9| Zebrafish DNA sequence from clone CH211-239F4 in linkage group 1,
              complete sequence
          Length = 146080

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 43     tttacagtgtacacatgtgaaa 64
              ||||||||||||||||||||||
Sbjct: 126840 tttacagtgtacacatgtgaaa 126861



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 43     tttacagtgtacacatgtgaaa 64
              ||||||||||||||||||||||
Sbjct: 115806 tttacagtgtacacatgtgaaa 115827
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>ref|XM_740608.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000072.04.0)
           partial mRNA
          Length = 2661

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 60  tgaaagagaatgaagaaaaaa 80
           |||||||||||||||||||||
Sbjct: 374 tgaaagagaatgaagaaaaaa 394
to top
>emb|AL365227.19| Human DNA sequence from clone RP3-422A11 on chromosome 6, complete
             sequence
          Length = 100477

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 63    aagagaatgaagaaaaaacag 83
             |||||||||||||||||||||
Sbjct: 67662 aagagaatgaagaaaaaacag 67682
to top
>emb|AL031650.22|HS1018D12 Human DNA sequence from clone RP5-1018D12 on chromosome 20q11.1-11.22
            Contains part of a CDK5 regulatory subunit associated
            protein 3 (CDK5RAP3) pseudogene, the RPL31P3 gene for
            ribosomal protein L31 pseudogene 3, a novel pseudogene,
            the DEFB118 gene for defensin beta 118 and the 3' end of
            the the DEFB119 gene for defensin beta 119, complete
            sequence
          Length = 98490

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 408  aatgagtgccattttcatccc 428
            |||||||||||||||||||||
Sbjct: 1187 aatgagtgccattttcatccc 1167
to top
>gb|AC073533.19| Homo sapiens X BAC RP11-589J20 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 182056

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 332   ataacaacaaagtcacctgat 352
             |||||||||||||||||||||
Sbjct: 16258 ataacaacaaagtcacctgat 16278
to top
>gb|AC147227.4| Mus musculus BAC clone RP23-153H22 from chromosome 18, complete sequence
          Length = 204482

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     aaagagaatgaagaaaaaac 81
              ||||||||||||||||||||
Sbjct: 183691 aaagagaatgaagaaaaaac 183672
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>emb|BX548040.19| Zebrafish DNA sequence from clone CH211-190L11 in linkage group 12,
             complete sequence
          Length = 147855

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    tttacagtgtacacatgtga 62
             ||||||||||||||||||||
Sbjct: 50487 tttacagtgtacacatgtga 50468
to top
>ref|XM_803514.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053503919.50) partial mRNA
          Length = 2574

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 71   gaagaaaaaacagcattgct 90
            ||||||||||||||||||||
Sbjct: 1297 gaagaaaaaacagcattgct 1278
to top
>ref|XM_807963.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053508209.20) partial mRNA
          Length = 2574

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 71   gaagaaaaaacagcattgct 90
            ||||||||||||||||||||
Sbjct: 1297 gaagaaaaaacagcattgct 1278
to top
>ref|XM_673131.1| Plasmodium berghei strain ANKA hypothetical protein (PB000312.02.0)
           partial mRNA
          Length = 1068

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 61  gaaagagaatgaagaaaaaa 80
           ||||||||||||||||||||
Sbjct: 255 gaaagagaatgaagaaaaaa 274
to top
>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 64      agagaatgaagaaaaaacag 83
               ||||||||||||||||||||
Sbjct: 4809735 agagaatgaagaaaaaacag 4809716
to top
>emb|AL589947.3| Human DNA sequence from clone RP11-127B16 on chromosome 6 Contaims a
             novel gene and a CpG island, complete sequence
          Length = 143715

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    aagagaatgaagaaaaaaca 82
             ||||||||||||||||||||
Sbjct: 75601 aagagaatgaagaaaaaaca 75582
to top
>emb|AL449103.15| Human DNA sequence from clone RP11-478B20 on chromosome 13, complete
            sequence
          Length = 58473

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 68   aatgaagaaaaaacagcatt 87
            ||||||||||||||||||||
Sbjct: 5935 aatgaagaaaaaacagcatt 5916
to top
>emb|AL445430.15| Human DNA sequence from clone RP11-716O23 on chromosome 6 Contains one or
              two novel genes, a repressor of protein-kinase
              (interferon-inducible double stranded RNA dependent
              inhibitor) (P58 repressor) (PRKRIR) pseudogene and a CpG
              island, complete sequence
          Length = 127862

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 280    tcttgagactggagaaaggt 299
              ||||||||||||||||||||
Sbjct: 104378 tcttgagactggagaaaggt 104359
to top
>emb|AL391839.9| Human DNA sequence from clone RP11-135A24 on chromosome 10 Contains the
              5' end of the EPC1 gene for enhancer of polycomb homolog 1,
              (Drosophila), the 5' end of the gene for a novel protein
              (FLJ32762) (FLJ25419), two novel genes and a CpG island,
              complete sequence
          Length = 162591

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 488    ttggttgttgttgcatcttc 507
              ||||||||||||||||||||
Sbjct: 145731 ttggttgttgttgcatcttc 145750
to top
>emb|AL390715.23| Human DNA sequence from clone RP11-167O6 on chromosome 10 Contains the
              ARHGAP12 gene for Rho GTPase activating protein 12 and two
              CpG islands, complete sequence
          Length = 189161

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 61     gaaagagaatgaagaaaaaa 80
              ||||||||||||||||||||
Sbjct: 121218 gaaagagaatgaagaaaaaa 121237
to top
>gb|AC115873.8| Mus musculus, clone RP24-349F22, complete sequence
          Length = 159466

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     aaagagaatgaagaaaaaac 81
              ||||||||||||||||||||
Sbjct: 101724 aaagagaatgaagaaaaaac 101705
to top
>emb|AL354654.15| Human DNA sequence from clone RP11-170N11 on chromosome 1 Contains part
              of a novel gene and a novel gene, complete sequence
          Length = 136856

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     cagtgtacacatgtgaaaga 66
              ||||||||||||||||||||
Sbjct: 101558 cagtgtacacatgtgaaaga 101577
to top
>emb|AL158812.10| Human DNA sequence from clone RP11-157E11 on chromosome 13, complete
             sequence
          Length = 173538

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    aagaaaaaacagcattgctc 91
             ||||||||||||||||||||
Sbjct: 58593 aagaaaaaacagcattgctc 58574
to top
>gb|AC046136.12| Homo sapiens 3 BAC RP11-190P13 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 155827

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    gaaagagaatgaagaaaaaa 80
             ||||||||||||||||||||
Sbjct: 19803 gaaagagaatgaagaaaaaa 19822
to top
>gb|AC163999.3| Mus musculus chromosome 15, clone RP24-387E19, complete sequence
          Length = 163830

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    tacagtgtacacatgtgaaa 64
             ||||||||||||||||||||
Sbjct: 43086 tacagtgtacacatgtgaaa 43105
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>emb|AL445066.1|TACID4 Thermoplasma acidophilum complete genome; segment 4/5
          Length = 297750

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 415   gccattttcatccctgatca 434
             ||||||||||||||||||||
Sbjct: 65957 gccattttcatccctgatca 65938
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>emb|AL928631.4| Mouse DNA sequence from clone RP23-240K15 on chromosome 4, complete
             sequence
          Length = 178426

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 52    tacacatgtgaaagagaatgaaga 75
             ||||||| ||||||||||||||||
Sbjct: 16067 tacacatttgaaagagaatgaaga 16090
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>emb|AL592283.5| Mouse DNA sequence from clone RP23-386C23 on chromosome 4, complete
             sequence
          Length = 197763

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    tttacagtgtacacatgtga 62
             ||||||||||||||||||||
Sbjct: 69675 tttacagtgtacacatgtga 69694
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>gb|AC146630.25| Medicago truncatula clone mth2-7f22, complete sequence
          Length = 124189

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 371   aactctttctgatcataaag 390
             ||||||||||||||||||||
Sbjct: 68260 aactctttctgatcataaag 68241
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>gb|AC126779.19| Medicago truncatula clone mth2-34m14, complete sequence
          Length = 128856

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    tgtgaaagagaatgaagaaa 77
             ||||||||||||||||||||
Sbjct: 55120 tgtgaaagagaatgaagaaa 55139
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>gb|AC105925.5| Homo sapiens BAC clone RP11-753I4 from 4, complete sequence
          Length = 136197

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    aacacagcagtaggtattta 39
             ||||||||||||||||||||
Sbjct: 37538 aacacagcagtaggtattta 37519
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>gb|AC103833.2| Homo sapiens chromosome 8, clone RP11-1057N3, complete sequence
          Length = 204508

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     tgaaagagaatgaagaaaaa 79
              ||||||||||||||||||||
Sbjct: 118848 tgaaagagaatgaagaaaaa 118829
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>gb|AC159320.3| Mus musculus BAC clone RP23-51A12 from chromosome 14, complete sequence
          Length = 255936

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 55     acatgtgaaagagaatgaagaaaa 78
              |||| |||||||||||||||||||
Sbjct: 199632 acatatgaaagagaatgaagaaaa 199655
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>gb|AC156567.3| Mus musculus BAC clone RP23-333F2 from chromosome 13, complete sequence
          Length = 204778

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    aagagaatgaagaaaaaaca 82
             ||||||||||||||||||||
Sbjct: 76239 aagagaatgaagaaaaaaca 76258
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>gb|AC159625.2| Mus musculus BAC clone RP24-262L7 from chromosome 12, complete sequence
          Length = 189979

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 176    aactaagacacatacagtgg 195
              ||||||||||||||||||||
Sbjct: 135568 aactaagacacatacagtgg 135549
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>gb|AC022257.19| Homo sapiens chromosome 8, clone RP11-715M14, complete sequence
          Length = 174545

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 309    tctgatgtacaagatcacca 328
              ||||||||||||||||||||
Sbjct: 104498 tctgatgtacaagatcacca 104479
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 373      ctctttctgatcataaagcg 392
                ||||||||||||||||||||
Sbjct: 24356809 ctctttctgatcataaagcg 24356828
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 445      caaaccatttttatgtgatc 464
                ||||||||||||||||||||
Sbjct: 27367568 caaaccatttttatgtgatc 27367587
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>gb|AC001231.3| Homo sapiens chromosome 17, clone CTB-44J6, complete sequence
          Length = 134457

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 173   ctgaactaagacacatacag 192
             ||||||||||||||||||||
Sbjct: 28646 ctgaactaagacacatacag 28665
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>gb|AC138123.2| Homo sapiens 12 BAC RP11-202G11 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 107706

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 360   ccagtggtacaaactctttc 379
             ||||||||||||||||||||
Sbjct: 68467 ccagtggtacaaactctttc 68486
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>gb|AC126684.4| Mus musculus BAC clone RP23-68L2 from chromosome 14, complete sequence
          Length = 233755

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 55    acatgtgaaagagaatgaagaaaa 78
             |||| |||||||||||||||||||
Sbjct: 18060 acatatgaaagagaatgaagaaaa 18037
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>dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1323_A06
          Length = 95665

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 445   caaaccatttttatgtgatc 464
             ||||||||||||||||||||
Sbjct: 69095 caaaccatttttatgtgatc 69114
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>gb|AC005774.1|AC005774 Homo sapiens chromosome 16, BAC clone 26O3 (LANL), complete sequence
          Length = 164538

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 488   ttggttgttgttgcatcttcaagc 511
             ||||||||||||||||||| ||||
Sbjct: 91739 ttggttgttgttgcatcttgaagc 91716
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>gb|AY108645.1| Zea mays PCO071128 mRNA sequence
          Length = 1196

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 60 tgaaagagaatgaagaaaaa 79
          ||||||||||||||||||||
Sbjct: 21 tgaaagagaatgaagaaaaa 2
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>emb|BX537934.1|HSM806056 Homo sapiens mRNA; cDNA DKFZp686E0831 (from clone DKFZp686E0831)
          Length = 4865

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 488  ttggttgttgttgcatcttc 507
            ||||||||||||||||||||
Sbjct: 3058 ttggttgttgttgcatcttc 3039
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>gb|AC161242.2| Mus musculus BAC clone RP24-200E4 from chromosome 12, complete sequence
          Length = 179665

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 176   aactaagacacatacagtgg 195
             ||||||||||||||||||||
Sbjct: 53517 aactaagacacatacagtgg 53498
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>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 64      agagaatgaagaaaaaacag 83
               ||||||||||||||||||||
Sbjct: 4733454 agagaatgaagaaaaaacag 4733435
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 373      ctctttctgatcataaagcg 392
                ||||||||||||||||||||
Sbjct: 24285015 ctctttctgatcataaagcg 24285034
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>emb|AL772423.4|CNS08CA1 Oryza sativa chromosome 12, . BAC OJ1058_H10 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 103803

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 373   ctctttctgatcataaagcg 392
             ||||||||||||||||||||
Sbjct: 20341 ctctttctgatcataaagcg 20360
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>emb|AL772427.4|CNS08CA5 Oryza sativa chromosome 12, . BAC OJ1260_B01 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 135793

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 373    ctctttctgatcataaagcg 392
              ||||||||||||||||||||
Sbjct: 133583 ctctttctgatcataaagcg 133602
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>dbj|AP006683.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT39I02, TM0377b,
             complete sequence
          Length = 53203

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 54    cacatgtgaaagagaatgaagaaa 77
             |||||||||||||||| |||||||
Sbjct: 28892 cacatgtgaaagagaaagaagaaa 28915
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>dbj|AP004908.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT12N11, TM0066,
             complete sequence
          Length = 79585

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 54    cacatgtgaaagagaatgaagaaa 77
             |||||||||||||||| |||||||
Sbjct: 36611 cacatgtgaaagagaaagaagaaa 36588


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,989,592
Number of Sequences: 3902068
Number of extensions: 5989592
Number of successful extensions: 113098
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 112671
Number of HSP's gapped (non-prelim): 416
length of query: 654
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 631
effective length of database: 17,143,297,704
effective search space: 10817420851224
effective search space used: 10817420851224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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