Clone Name | rbasd23i20 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | YDB1_SCHPO (Q10354) Hypothetical protein C22E12.01 in chromosome I | 42 | 0.001 | 2 | TPT2_BRAOB (P52178) Triose phosphate/phosphate translocator, non... | 34 | 0.27 | 3 | YJT3_YEAST (P39542) Hypothetical protein YJL193w | 33 | 0.60 | 4 | SL35E_HUMAN (Q96K37) Solute carrier family 35 member E1 | 32 | 0.78 | 5 | SL35E_MOUSE (Q8CD26) Solute carrier family 35 member E1 | 32 | 0.78 | 6 | VG48_SHV21 (Q01033) Hypothetical gene 48 protein | 30 | 3.9 | 7 | LIPB_SHEON (Q8EHQ5) Lipoyltransferase (EC 2.3.1.-) (Lipoyl-[acyl... | 29 | 8.6 |
---|
>YDB1_SCHPO (Q10354) Hypothetical protein C22E12.01 in chromosome I| Length = 374 Score = 42.0 bits (97), Expect = 0.001 Identities = 19/50 (38%), Positives = 30/50 (60%) Frame = -3 Query: 511 KTSALTMNVAGVVKDWLLIAFSWSVIRDTVTPINLFGYGIAFLGVGYYNH 362 KTS +T++V G++K+ + I S D + PIN+ G I G+G YN+ Sbjct: 301 KTSIVTLSVCGILKEIITIIASTLFYHDILLPINIVGLVITLCGIGVYNY 350
>TPT2_BRAOB (P52178) Triose phosphate/phosphate translocator, non-green| plastid, chloroplast precursor (CTPT) Length = 402 Score = 33.9 bits (76), Expect = 0.27 Identities = 18/49 (36%), Positives = 27/49 (55%) Frame = -3 Query: 511 KTSALTMNVAGVVKDWLLIAFSWSVIRDTVTPINLFGYGIAFLGVGYYN 365 + S +T +V VK ++I S + V+P+N FG GIA GV Y+ Sbjct: 342 RVSPVTHSVGNCVKRVVVIVSSVIFFKTPVSPVNAFGTGIALAGVFLYS 390
>YJT3_YEAST (P39542) Hypothetical protein YJL193w| Length = 402 Score = 32.7 bits (73), Expect = 0.60 Identities = 16/48 (33%), Positives = 28/48 (58%) Frame = -3 Query: 511 KTSALTMNVAGVVKDWLLIAFSWSVIRDTVTPINLFGYGIAFLGVGYY 368 + S LT ++A ++K + +IA SW I +T + +FG + LG+ Y Sbjct: 339 EVSTLTYSIANLMKRFAIIAVSWVFIGRRITWLQVFGLVLNTLGLFLY 386
>SL35E_HUMAN (Q96K37) Solute carrier family 35 member E1| Length = 266 Score = 32.3 bits (72), Expect = 0.78 Identities = 18/47 (38%), Positives = 26/47 (55%) Frame = -3 Query: 505 SALTMNVAGVVKDWLLIAFSWSVIRDTVTPINLFGYGIAFLGVGYYN 365 S L+ +VA K ++I S ++R+ VT N+ G A LGV YN Sbjct: 143 SPLSYSVANATKRIMVITVSLIMLRNPVTSTNVLGMMTAILGVFLYN 189
>SL35E_MOUSE (Q8CD26) Solute carrier family 35 member E1| Length = 265 Score = 32.3 bits (72), Expect = 0.78 Identities = 18/47 (38%), Positives = 26/47 (55%) Frame = -3 Query: 505 SALTMNVAGVVKDWLLIAFSWSVIRDTVTPINLFGYGIAFLGVGYYN 365 S L+ +VA K ++I S ++R+ VT N+ G A LGV YN Sbjct: 143 SPLSYSVANATKRIMVITVSLIMLRNPVTSTNVLGMMTAILGVFLYN 189
>VG48_SHV21 (Q01033) Hypothetical gene 48 protein| Length = 797 Score = 30.0 bits (66), Expect = 3.9 Identities = 16/40 (40%), Positives = 18/40 (45%) Frame = +2 Query: 386 EGDPVAEEVDRGHRVPDHGPGEGDEQPVLDDAGHVHGERG 505 EGD +E D G D G EGDE D G G+ G Sbjct: 625 EGDEGEDEGDEGEDEGDEGEDEGDEGEDEGDEGEDEGDEG 664 Score = 30.0 bits (66), Expect = 3.9 Identities = 16/40 (40%), Positives = 18/40 (45%) Frame = +2 Query: 386 EGDPVAEEVDRGHRVPDHGPGEGDEQPVLDDAGHVHGERG 505 EGD +E D G D G EGDE D G G+ G Sbjct: 618 EGDEGEDEGDEGEDEGDEGEDEGDEGEDEGDEGEDEGDEG 657 Score = 30.0 bits (66), Expect = 3.9 Identities = 16/40 (40%), Positives = 18/40 (45%) Frame = +2 Query: 386 EGDPVAEEVDRGHRVPDHGPGEGDEQPVLDDAGHVHGERG 505 EGD +E D G D G EGDE D G G+ G Sbjct: 611 EGDEGEDEGDEGEDEGDEGEDEGDEGEDEGDEGEDEGDEG 650 Score = 29.3 bits (64), Expect = 6.6 Identities = 15/40 (37%), Positives = 18/40 (45%) Frame = +2 Query: 386 EGDPVAEEVDRGHRVPDHGPGEGDEQPVLDDAGHVHGERG 505 EG+ +E D G D G EGDE D G G+ G Sbjct: 604 EGEDEGDEGDEGEDEGDEGEDEGDEGEDEGDEGEDEGDEG 643
>LIPB_SHEON (Q8EHQ5) Lipoyltransferase (EC 2.3.1.-) (Lipoyl-[acyl-carrier| protein]-protein-N-lipoyltransferase) (Lipoate-protein ligase B) Length = 219 Score = 28.9 bits (63), Expect = 8.6 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = +2 Query: 389 GDPVAEEVDRGHRVPDHGPGEGDEQPVLD 475 GD +VDRG +V HGPG+ P+LD Sbjct: 64 GDIPVIQVDRGGQVTYHGPGQLVVYPLLD 92 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,622,827 Number of Sequences: 219361 Number of extensions: 940145 Number of successful extensions: 2694 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 2613 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2686 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3812186532 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)