>SUCP_AGRVI (P33910) Sucrose phosphorylase (EC 2.4.1.7) (Sucrose|
           glucosyltransferase)
          Length = 488

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
 Frame = -3

Query: 332 RVGLWGSIRALARGYEIIMGXLLFTPIAFLAWF-PFV-----SEFQTR-MLFNQAFSRGL 174
           R+G W  +RALA   EI+   ++    A  +WF  F+     SEF    M F +AF RG 
Sbjct: 64  RLGSWDDVRALAGSVEIMADLIVNHVSAQSSWFQDFIAKGSDSEFADMFMTFGKAFPRGA 123

Query: 173 QISRILGGHKKDRAARSKDDR 111
               +L  ++     R +  R
Sbjct: 124 SEQDLLNIYRPRLGCRFQRPR 144

>VND_DROME (P22808) Homeobox protein vnd (Protein ventral nervous system|
           defective) (Homeobox protein NK-2)
          Length = 723

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +3

Query: 153 TQDPRDLQTTAEGLVEEHPSLELRHEREPRQER-DRGEEQXPHD 281
           T  P    T    L    PSLE + ERE R++R DR E Q  H+
Sbjct: 41  TVSPSSPATPKRPLRTSTPSLERKREREDREDREDRKERQERHE 84

>LEGA_PEA (P02857) Legumin A precursor [Contains: Legumin A alpha chain|
           (Legumin A acidic chain); Legumin A beta chain (Legumin
           A basic chain)]
          Length = 517

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 207 PSLELRHEREPRQERDRGEEQXP 275
           P  + RH+R  RQE D  EE+ P
Sbjct: 259 PEKQARHQRGSRQEEDEDEEKQP 281

>GLI2_HUMAN (P10070) Zinc finger protein GLI2 (Tax helper protein)|
          Length = 1258

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +3

Query: 108  LPIVLAPRRPVLLVPTQDPRDLQTTAEGLVEEHPSLE 218
            +P +L  R+P  + P   P  + T   GLV+  P LE
Sbjct: 1012 VPSLLPARQPGFMEPQTGPMGVATAGFGLVQPRPPLE 1048

>GLYA2_BURPS (Q63MV1) Serine hydroxymethyltransferase 2 (EC 2.1.2.1) (Serine|
           methylase 2) (SHMT 2)
          Length = 424

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +1

Query: 265 SSXPMMISYPRARARIDPHXPTLMIAGXSA 354
           S   M+I Y +  A    H P+L+IAG SA
Sbjct: 152 SRDTMLIDYDQVEALAQQHKPSLIIAGFSA 181

>GLYA2_BURP1 (Q3JGP5) Serine hydroxymethyltransferase 2 (EC 2.1.2.1) (Serine|
           methylase 2) (SHMT 2)
          Length = 424

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +1

Query: 265 SSXPMMISYPRARARIDPHXPTLMIAGXSA 354
           S   M+I Y +  A    H P+L+IAG SA
Sbjct: 152 SRDTMLIDYDQVEALAQQHKPSLIIAGFSA 181

>AT221_ASPFU (Q4WH97) Autophagy-related protein 22-1|
          Length = 609

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 15/31 (48%), Positives = 16/31 (51%)
 Frame = +3

Query: 192 LVEEHPSLELRHEREPRQERDRGEEQXPHDD 284
           LV  HPS+ LR  REPR   D    Q  H D
Sbjct: 203 LVRHHPSV-LRSAREPRPALDDSRAQEGHSD 232

>IMA1_XENLA (P52170) Importin alpha-1 subunit (Karyopherin alpha-1 subunit)|
          Length = 521

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
 Frame = +3

Query: 87  LRRQSIHLP--IVLAPRRPVLLVPTQDPRDLQTTAEGLVEEHPSLELRHEREPRQERDRG 260
           L+R+++ LP  ++L+P +  +      P  L+   +G+    P  ELR  +  R+   R 
Sbjct: 44  LKRRNVCLPEELILSPEKNAMQSVQVPPLSLEEIVQGMNSGDPENELRCTQAARKMLSR- 102

Query: 261 EEQXPHDDLV 290
           E   P +D++
Sbjct: 103 ERNPPLNDII 112

>RAD21_MOUSE (Q61550) Double-strand-break repair protein rad21 homolog (Pokeweed|
           agglutinin-binding protein 29) (PW29) (SCC1 homolog)
          Length = 635

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = +3

Query: 135 PVLLVPTQDPRDLQTTAEGLVEEHPSLELRHEREPRQERDRGEEQXPHDD 284
           PV L P + P   Q          P LEL  E+E  +E+++ EE+   D+
Sbjct: 505 PVELPPEEPPNICQLI--------PELELLPEKEKEKEKEKEEEEEEEDE 546

>CAH9_HUMAN (Q16790) Carbonic anhydrase 9 precursor (EC 4.2.1.1) (Carbonic|
           anhydrase IX) (Carbonate dehydratase IX) (CA-IX) (CAIX)
           (Membrane antigen MN) (P54/58N) (Renal cell
           carcinoma-associated antigen G250) (RCC-associated
           antigen G250) (pMW1)
          Length = 459

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
 Frame = +3

Query: 36  PLQPSS-MPTIVYLPYY*LRRQSIHLPIVLAPRRPVLLVPTQDPRDLQTTAEGLVEEHPS 212
           PL PS  +P ++  P   L  Q +   ++L P  P  L   Q+   L   + G  +    
Sbjct: 3   PLCPSPWLPLLIPAPAPGLTVQLLLSLLLLVPVHPQRLPRMQEDSPLGGGSSGEDDPLGE 62

Query: 213 LELRHERE-PRQERDRGEEQXPHDDLVP 293
            +L  E + PR+E   GEE  P ++ +P
Sbjct: 63  EDLPSEEDSPREEDPPGEEDLPGEEDLP 90

>MISS_MOUSE (Q9D7G9) MAPK-interacting and spindle-stabilizing protein|
           (Mitogen-activated protein kinase 1-interacting protein
           1)
          Length = 263

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +2

Query: 98  IYPSTYRPCSAPPGPSCAHPG 160
           + PS   P   PPGPS A PG
Sbjct: 141 LQPSPNNPYPLPPGPSAASPG 161

>GRSB_ANEMI (P0C063) Gramicidin S synthetase 2 (Gramicidin S synthetase II)|
            [Includes: ATP-dependent proline adenylase (ProA)
            (Proline activase); ATP-dependent valine adenylase (ValA)
            (Valine activase); ATP-dependent ornithine adenylase
            (OrnA) (Ornithine
          Length = 4450

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 90   RRQSIHLPIVLAPRRPVLLVPTQDPRDLQTTAEG 191
            ++Q  +   V A  RP+L +PT  PR +Q + +G
Sbjct: 3315 KKQEEYWVNVFADERPILDIPTDYPRPMQQSFDG 3348

>INVO_SAGOE (P24712) Involucrin|
          Length = 493

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 1/90 (1%)
 Frame = +3

Query: 3   NTYIHTTDKPQPLQPSSMPTIVYLPYY*L-RRQSIHLPIVLAPRRPVLLVPTQDPRDLQT 179
           NT      +P PL P      V LP   L + +  H+ IV         VP Q+    Q 
Sbjct: 28  NTQQEQRKQPAPLPPPCQKVPVELPVEVLSKHEEKHMTIVKG-------VPEQECEQQQP 80

Query: 180 TAEGLVEEHPSLELRHEREPRQERDRGEEQ 269
             + L ++H   +  H++    E+   +E+
Sbjct: 81  QEQELQQQHWEQDKEHQKAENPEQQLKQEK 110

>GRSB_BREBE (P0C064) Gramicidin S synthetase 2 (Gramicidin S synthetase II)|
            [Includes: ATP-dependent proline adenylase (ProA)
            (Proline activase); ATP-dependent valine adenylase (ValA)
            (Valine activase); ATP-dependent ornithine adenylase
            (OrnA) (Ornithine
          Length = 4449

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 90   RRQSIHLPIVLAPRRPVLLVPTQDPRDLQTTAEG 191
            ++Q  +   V A  RP+L +PT  PR +Q + +G
Sbjct: 3314 KKQEEYWVNVFADERPILDIPTDYPRPMQQSFDG 3347


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,067,137
Number of Sequences: 219361
Number of extensions: 738399
Number of successful extensions: 3122
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3114
length of database: 80,573,946
effective HSP length: 94
effective length of database: 59,954,012
effective search space used: 1438896288
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)