ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd23h11 |
|---|---|
| Clone Library Name | barley_pub |
>ALX1_CAEEL (P34552) Apoptosis-linked gene 2-interacting protein X 1 (Protein| pqn-58) (Protein YNK1) Length = 882 Score = 34.7 bits (78), Expect = 0.27 Identities = 26/70 (37%), Positives = 29/70 (41%), Gaps = 4/70 (5%) Frame = -2 Query: 675 SVANAAAFVPMPPMVTTAAQQPQTILVQQTPVQGQASAPHPQYNIYQ----PPPQHFVQQ 508 S ANA P P + + P Q +Q AP PQYN YQ P Q F Q Sbjct: 749 SPANAPPRPPPPRPAAPSVESPIPPPRTQQSMQATPGAP-PQYNPYQQQQQPQMQQFQQH 807 Query: 507 PGGLIMGMPY 478 PG MPY Sbjct: 808 PGYYQQPMPY 817
>NLPD_SHIFL (P0ADA4) Lipoprotein nlpD precursor| Length = 379 Score = 34.3 bits (77), Expect = 0.36 Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 2/65 (3%) Frame = -2 Query: 678 PSVANAAAFVPMPPMV--TTAAQQPQTILVQQTPVQGQASAPHPQYNIYQPPPQHFVQQP 505 P+ N+ + PP + T+ AQQPQ VQQ +Q + PQ QP Q VQ Sbjct: 44 PANTNSGMLITPPPKMGTTSTAQQPQIQPVQQPQIQ---ATQQPQIQPVQPVAQQPVQME 100 Query: 504 GGLIM 490 G I+ Sbjct: 101 NGRIV 105
>NLPD_ECOLI (P0ADA3) Lipoprotein nlpD precursor| Length = 379 Score = 34.3 bits (77), Expect = 0.36 Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 2/65 (3%) Frame = -2 Query: 678 PSVANAAAFVPMPPMV--TTAAQQPQTILVQQTPVQGQASAPHPQYNIYQPPPQHFVQQP 505 P+ N+ + PP + T+ AQQPQ VQQ +Q + PQ QP Q VQ Sbjct: 44 PANTNSGMLITPPPKMGTTSTAQQPQIQPVQQPQIQ---ATQQPQIQPVQPVAQQPVQME 100 Query: 504 GGLIM 490 G I+ Sbjct: 101 NGRIV 105
>ANP_NOTCO (P24856) Ice-structuring glycoprotein precursor (ISGP) (Antifreeze| glycopeptide polyprotein) (AFGP polyprotein) [Contains: AFGP7 (AFGP 7); AFGP8 (AFGP 8); AFGP8-like] (Fragment) Length = 790 Score = 32.3 bits (72), Expect = 1.4 Identities = 35/142 (24%), Positives = 54/142 (38%), Gaps = 6/142 (4%) Frame = -1 Query: 643 AANGHHSSTAAPDNLGTANSCARSSFCATSPIQYLSAPSTALCPAAWRFNYGHAIQHEHH 464 AA +TAA L A + A ++ AT+ + + + +TA PA FN+ Sbjct: 346 AATAATPATAATPALIFAATAATAATPATAALNFAATAATAATPATPAFNFAATAATPAT 405 Query: 463 ESTP------TSATAADDEPSKGXXXXXXXXXXXXXXXXXDECCAPDAVHASAAWCPTVQ 302 +TP T+ATAA P+ A A A+ + Sbjct: 406 AATPALIFAATAATAA--TPATAALNFAATAATPATAATPALIFAATAATAATPATAALH 463 Query: 301 AFAATSRDAIFPSPISVTFLVT 236 FAAT+ A P+ ++ F T Sbjct: 464 -FAATAATAATPATAALNFAAT 484
>PHLA1_RAT (Q9QZA1) Pleckstrin homology-like domain family A member 1| (Proline- and glutamine-rich protein) (PQR protein) Length = 263 Score = 32.3 bits (72), Expect = 1.4 Identities = 17/42 (40%), Positives = 21/42 (50%) Frame = -2 Query: 636 MVTTAAQQPQTILVQQTPVQGQASAPHPQYNIYQPPPQHFVQ 511 + + +Q Q LVQQ P Q Q P PQ QP PQ +Q Sbjct: 143 LAVKSTRQKQQHLVQQQPPQTQQIQPQPQQPQIQPQPQPQIQ 184
>HOR9_HORVU (P17992) C-hordein (Clone PC-919) (Fragment)| Length = 68 Score = 32.3 bits (72), Expect = 1.4 Identities = 23/62 (37%), Positives = 27/62 (43%) Frame = -2 Query: 648 PMPPMVTTAAQQPQTILVQQTPVQGQASAPHPQYNIYQPPPQHFVQQPGGLIMGMPYSMS 469 P+P QQPQ Q P Q Q P+PQ PQ F QQP L PY+ Sbjct: 12 PIPQQPQPYPQQPQPFSQQPIPQQPQ---PYPQ------QPQPFPQQPIPLQPHQPYTQQ 62 Query: 468 TM 463 T+ Sbjct: 63 TI 64
>PACC_CANAL (Q9UW14) pH-response transcription factor pacC/RIM101 (pH-response| regulator protein 2) Length = 661 Score = 32.0 bits (71), Expect = 1.8 Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 1/59 (1%) Frame = -2 Query: 678 PSVANAAAFVPMPPMVTTAAQQPQTILVQQTPVQGQASAPHPQYN-IYQPPPQHFVQQP 505 P+ AAF P T A Q T QQ P Q HP N Y P +++ QP Sbjct: 87 PTTTKPAAFAPSANQSNTTASQSYTQPAQQLPTQ-----LHPSLNQAYNNQPSYYLHQP 140
>HOR3_HORVU (P06471) B3-hordein (Fragment)| Length = 264 Score = 32.0 bits (71), Expect = 1.8 Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 10/49 (20%) Frame = -2 Query: 621 AQQPQTILVQQT----PVQGQASAPHPQYNIYQPP------PQHFVQQP 505 ++QPQ I+ QQ P+Q Q P PQ I Q P PQ F QQP Sbjct: 5 SRQPQQIIPQQPQQPFPLQPQQPQPFPQQPIPQQPQPYPQQPQSFPQQP 53
>PAT1_YEAST (P25644) Topoisomerase II-associated protein PAT1| Length = 796 Score = 32.0 bits (71), Expect = 1.8 Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 4/28 (14%) Frame = -2 Query: 348 PQMQFTLQ----QPGAPQFRPLQPPPGM 277 PQ QF +Q QPG QF P PPPG+ Sbjct: 175 PQQQFPMQPASGQPGPSQFAPPPPPPGV 202
>MID2_YEAST (P36027) Mating process protein MID2 (Serine-rich protein SMS1)| (Protein kinase A interference protein) Length = 376 Score = 31.6 bits (70), Expect = 2.3 Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 11/91 (12%) Frame = -1 Query: 655 LCTNAANGHHSSTAAPDNLGTANSCARSSFCATSPIQYLSAPSTALCPAAWRFNYGHAIQ 476 + + +A S+++ + +++S + + ++SP SAPST+ P+ +N G I Sbjct: 124 ISSTSATSESSTSSTQTSTSSSSSLSSTPSSSSSPSTITSAPSTSSTPSTTAYNQGSTIT 183 Query: 475 H--------EHHESTPT---SATAADDEPSK 416 +H +T T SATA SK Sbjct: 184 SIINGKTILSNHYTTVTYTPSATADSSNKSK 214
>TEGU_EBV (P03186) Large tegument protein| Length = 3149 Score = 31.6 bits (70), Expect = 2.3 Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 6/57 (10%) Frame = -2 Query: 678 PSVANAAAFVPMPPMVT------TAAQQPQTILVQQTPVQGQASAPHPQYNIYQPPP 526 P+ A A + P T +AA P +L QQ P A AP P QPPP Sbjct: 525 PTAAAAPTTTTLSPPPTQQQPPQSAAPAPSPLLPQQQPTPSAAPAPSPLLPQQQPPP 581
>LMBL3_MOUSE (Q8BLB7) Lethal(3)malignant brain tumor-like 3 protein| (L(3)mbt-like 3 protein) Length = 883 Score = 31.2 bits (69), Expect = 3.0 Identities = 21/63 (33%), Positives = 22/63 (34%) Frame = -2 Query: 669 ANAAAFVPMPPMVTTAAQQPQTILVQQTPVQGQASAPHPQYNIYQPPPQHFVQQPGGLIM 490 A A P P Q PQ QQ P QA P Q PP VQQP + Sbjct: 699 AQQAQQAPQAPQTPQPQQAPQVQQAQQAPQAQQAQQPQQAQQPQQAPP---VQQPQQVQQ 755 Query: 489 GMP 481 P Sbjct: 756 AQP 758
>TRIP6_HUMAN (Q15654) Thyroid receptor-interacting protein 6 (TRIP6)| (OPA-interacting protein 1) (Zyxin-related protein 1) (ZRP-1) Length = 476 Score = 31.2 bits (69), Expect = 3.0 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 5/54 (9%) Frame = -2 Query: 645 MPPMVTTAAQQPQTILVQQ-----TPVQGQASAPHPQYNIYQPPPQHFVQQPGG 499 +PP A+ PQ + + P G A PHP+ N P + Q PGG Sbjct: 7 LPPKQPEPARAPQGRAIPRGTPGPPPAHGAALQPHPRVNFCPLPSEQCYQAPGG 60
>PDIA1_RABIT (P21195) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI)| (Prolyl 4-hydroxylase beta subunit) (Cellular thyroid hormone-binding protein) (p55) Length = 509 Score = 31.2 bits (69), Expect = 3.0 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Frame = +3 Query: 465 WCSCCMACP*LNLQAAGQSAVEGAD-RYCIGDVAQKLDLAQEFAV 596 WC C A +AAG+ EG+D R D ++ DLAQ++ V Sbjct: 53 WCGHCKALAPEYAKAAGKLKAEGSDIRLAKVDATEESDLAQQYGV 97
>ATX2L_MOUSE (Q7TQH0) Ataxin-2-like protein| Length = 1049 Score = 30.8 bits (68), Expect = 4.0 Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Frame = -2 Query: 639 PMVTTAAQQPQTILVQQTPVQGQA-SAPH-----PQYNIYQP 532 P T QPQ+ +PVQ QA APH PQ N+Y P Sbjct: 879 PATTPTGSQPQSQHAAPSPVQHQAGQAPHLGSGQPQQNLYHP 920 Score = 30.0 bits (66), Expect = 6.7 Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 3/62 (4%) Frame = -2 Query: 678 PSVANAAAFVPMPPMVTTAAQQPQTILVQQTPVQGQASAPHPQ---YNIYQPPPQHFVQQ 508 PS A + P + T+ PQ I+ TP A P PQ ++Q P H Q Sbjct: 813 PSQPVFAPMLQSNPRMLTSGSHPQAIVSSSTPQYPAAEQPTPQALYATVHQSYPHHATQL 872 Query: 507 PG 502 G Sbjct: 873 HG 874
>PHLA1_MOUSE (Q62392) Pleckstrin homology-like domain family A member 1 (T-cell| death-associated gene 51 protein) (Proline- and glutamine-rich protein) (PQR protein) Length = 261 Score = 30.8 bits (68), Expect = 4.0 Identities = 18/42 (42%), Positives = 22/42 (52%) Frame = -2 Query: 636 MVTTAAQQPQTILVQQTPVQGQASAPHPQYNIYQPPPQHFVQ 511 + + +Q Q LVQQ P Q Q P PQ I QP PQ +Q Sbjct: 140 LAVKSTRQKQQHLVQQQPPQTQQIQPQPQPQI-QPQPQPQIQ 180
>ATX2L_HUMAN (Q8WWM7) Ataxin-2-like protein (Ataxin-2 domain protein)| (Ataxin-2-related protein) Length = 1075 Score = 30.8 bits (68), Expect = 4.0 Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Frame = -2 Query: 639 PMVTTAAQQPQTILVQQTPVQGQA-SAPH-----PQYNIYQP 532 P T QPQ+ +PVQ QA APH PQ N+Y P Sbjct: 875 PATTPTGSQPQSQHAAPSPVQHQAGQAPHLGSGQPQQNLYHP 916 Score = 29.6 bits (65), Expect = 8.8 Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 3/59 (5%) Frame = -2 Query: 678 PSVANAAAFVPMPPMVTTAAQQPQTILVQQTPVQGQASAPHPQ---YNIYQPPPQHFVQ 511 PS A + P + T+ PQ I+ TP A P PQ ++Q P H Q Sbjct: 809 PSQPVFAPMLQSNPRMLTSGSHPQAIVSSSTPQYPSAEQPTPQALYATVHQSYPHHATQ 867
>PCQAP_MOUSE (Q924H2) Positive cofactor 2 glutamine/Q-rich-associated protein| (PC2 glutamine/Q-rich-associated protein) (mPcqap) Length = 792 Score = 30.8 bits (68), Expect = 4.0 Identities = 19/45 (42%), Positives = 23/45 (51%) Frame = -2 Query: 657 AFVPMPPMVTTAAQQPQTILVQQTPVQGQASAPHPQYNIYQPPPQ 523 A PPM + QQPQ Q P Q + HPQ+ +QPPPQ Sbjct: 260 ALQAQPPMQQPSMQQPQPPPSQALP-QQLSQLHHPQH--HQPPPQ 301
>VP87_NPVOP (P17930) Capsid protein p87| Length = 624 Score = 30.4 bits (67), Expect = 5.2 Identities = 19/48 (39%), Positives = 19/48 (39%) Frame = -2 Query: 648 PMPPMVTTAAQQPQTILVQQTPVQGQASAPHPQYNIYQPPPQHFVQQP 505 P P T AQQP QTP Q Q S P P Y P QP Sbjct: 276 PQTPAYATPAQQPSQPTPAQTPAQ-QPSQPTPAYVTSAQTPAQQPSQP 322
>TOR_CAEEL (Q95Q95) Target of rapamycin homolog (EC 2.7.11.1) (CeTOR) (Lethal| protein 363) Length = 2697 Score = 30.4 bits (67), Expect = 5.2 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 1/57 (1%) Frame = -2 Query: 648 PMPPMVTTAAQQPQTILVQQTP-VQGQASAPHPQYNIYQPPPQHFVQQPGGLIMGMP 481 P P V + QQPQ P V S P P QP P H + +P +I+ P Sbjct: 1941 PHPTTVISPPQQPQQPKKMHIPPVTRATSPPPPAQKSPQPAPFHSITEPLSVIIDYP 1997
>RD23D_ARATH (Q84L30) Putative DNA repair protein RAD23-4 (RAD23-like protein 4)| (AtRAD23-4) Length = 378 Score = 30.4 bits (67), Expect = 5.2 Identities = 19/60 (31%), Positives = 25/60 (41%) Frame = -2 Query: 678 PSVANAAAFVPMPPMVTTAAQQPQTILVQQTPVQGQASAPHPQYNIYQPPPQHFVQQPGG 499 P V+ A VP+P T A P T QT V GQA++ + Q + GG Sbjct: 102 PQVSAPTASVPVPTSGTATAAAPATAASVQTDVYGQAASNLVAGTTLESTVQQILDMGGG 161
>NAB3_YEAST (P38996) Nuclear polyadenylated RNA-binding protein 3| Length = 802 Score = 30.4 bits (67), Expect = 5.2 Identities = 19/36 (52%), Positives = 19/36 (52%), Gaps = 4/36 (11%) Frame = -2 Query: 576 GQASAPHPQYNIYQ----PPPQHFVQQPGGLIMGMP 481 G A P PQ N YQ PPPQ QQP G GMP Sbjct: 582 GPAVGPPPQTNYYQGYSMPPPQQQQQQPYG-NYGMP 616
>HNRL1_HUMAN (Q9BUJ2) Heterogeneous nuclear ribonucleoprotein U-like protein 1| (Adenovirus early region 1B-associated protein 5) (E1B-55 kDa-associated protein 5) (E1B-AP5) Length = 856 Score = 30.4 bits (67), Expect = 5.2 Identities = 15/25 (60%), Positives = 15/25 (60%) Frame = -2 Query: 357 NVAPQMQFTLQQPGAPQFRPLQPPP 283 N APQ Q QQP PQ P QPPP Sbjct: 689 NRAPQQQPPPQQPPPPQPPPQQPPP 713
>HNRL1_MOUSE (Q8VDM6) Heterogeneous nuclear ribonucleoprotein U-like protein 1| Length = 859 Score = 30.4 bits (67), Expect = 5.2 Identities = 15/25 (60%), Positives = 15/25 (60%) Frame = -2 Query: 357 NVAPQMQFTLQQPGAPQFRPLQPPP 283 N APQ Q QQP PQ P QPPP Sbjct: 692 NRAPQQQPPPQQPPPPQPPPQQPPP 716
>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich| glycoprotein) Length = 620 Score = 30.0 bits (66), Expect = 6.7 Identities = 21/68 (30%), Positives = 25/68 (36%), Gaps = 5/68 (7%) Frame = -2 Query: 654 FVPMPPMVTTAAQQPQTILVQQTPVQGQASAPH-----PQYNIYQPPPQHFVQQPGGLIM 490 F P PP + P TP GQ +P P I+ PPP H +P Sbjct: 536 FSPPPPRQIHSPPPPHWQPRTPTPTYGQPPSPPTFSAPPPRQIHSPPPPHRQPRPPTPTY 595 Query: 489 GMPYSMST 466 G P S T Sbjct: 596 GQPPSPPT 603
>HR4_DROME (Q9W539) Hormone receptor 4 (dHR4)| Length = 1518 Score = 30.0 bits (66), Expect = 6.7 Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 11/88 (12%) Frame = -1 Query: 664 CCCLCTNAANGHHSSTAAPDNLGTANSCARSSFCATSPIQYLSAPSTALCPAAWRFNYGH 485 C + A SST++ + +++S SS + SP A STA CPA+ + G+ Sbjct: 133 CVSTSSTTAAAATSSTSSLSSSSSSSSSTSSSTSSASPTA--GASSTATCPASSSSSSGN 190 Query: 484 -------AIQHEHHE----STPTSATAA 434 +I+ EH E S+ SA AA Sbjct: 191 GSGGKSGSIKQEHTEIHSSSSAISAAAA 218
>NU124_SCHPO (Q09904) Nucleoporin nup124 (Nuclear pore protein nup124)| Length = 1159 Score = 30.0 bits (66), Expect = 6.7 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 5/80 (6%) Frame = -1 Query: 637 NGHHSSTAAPDNLGTANSCARSSFCATSPI----QYLSAPSTALCPAAWRFNYGHA-IQH 473 N +S+ AP + GT+N A S ATS +A ++A P F++G + Sbjct: 914 NPSTNSSTAPFSFGTSNKPAFSFGSATSKTTSEGTAPAASASAPAPTTSAFSFGASNSSM 973 Query: 472 EHHESTPTSATAADDEPSKG 413 E+TP + A D P+ G Sbjct: 974 NKEENTPMAKDAGDTAPASG 993
>MGR1_RAT (P23385) Metabotropic glutamate receptor 1 precursor (mGluR1)| Length = 1199 Score = 30.0 bits (66), Expect = 6.7 Identities = 19/52 (36%), Positives = 25/52 (48%) Frame = -2 Query: 648 PMPPMVTTAAQQPQTILVQQTPVQGQASAPHPQYNIYQPPPQHFVQQPGGLI 493 P+PP +T A++ L +G P PQ QPPPQ QQP L+ Sbjct: 990 PLPPHLT--AEETPLFLADSVIPKG-LPPPLPQQQPQQPPPQQPPQQPKSLM 1038
>SIMA_DROME (Q24167) Protein similar| Length = 1507 Score = 30.0 bits (66), Expect = 6.7 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Frame = -1 Query: 652 CTNAANG-HHSSTAAPDNLGTANSCARSSFCATSPIQYLSAPSTALCPAAWRFNYGHAIQ 476 C+ A+G H+ S ++ +N+ + ++ A SP+ L+ STA N H Q Sbjct: 707 CSTTASGQHYQSPSSSSTSAPSNTSSSNNSYANSPLSPLTPNSTATAS-----NPSHQQQ 761 Query: 475 HEHH 464 +HH Sbjct: 762 QQHH 765
>SSB_SHEHA (P77953) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 226 Score = 29.6 bits (65), Expect = 8.8 Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 2/32 (6%) Frame = -2 Query: 594 QQTPVQGQASAPH--PQYNIYQPPPQHFVQQP 505 QQ P QG A P PQ Y P PQ QQP Sbjct: 137 QQAPQQGYAPKPQSAPQQPAYAPKPQSAPQQP 168
>RB97D_DROME (Q02926) Ribonucleoprotein RB97D| Length = 471 Score = 29.6 bits (65), Expect = 8.8 Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 3/49 (6%) Frame = -2 Query: 642 PPMVTTAAQQPQTILVQQTPVQGQASAPHPQYNIYQPPP---QHFVQQP 505 PP+ A P QQ P SAP P +N + PPP + QQP Sbjct: 246 PPVPPQQAMGPY----QQQPPPAPMSAPPPNFNYWGPPPPAMPPYYQQP 290
>PDIA1_BOVIN (P05307) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI)| (Prolyl 4-hydroxylase beta subunit) (Cellular thyroid hormone-binding protein) (p55) Length = 510 Score = 29.6 bits (65), Expect = 8.8 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Frame = +3 Query: 465 WCSCCMACP*LNLQAAGQSAVEGAD-RYCIGDVAQKLDLAQEFAV 596 WC C A +AAG+ EG++ R D ++ DLAQ++ V Sbjct: 54 WCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGV 98
>PDIA1_PONPY (Q5R5B6) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI)| (Prolyl 4-hydroxylase beta subunit) Length = 508 Score = 29.6 bits (65), Expect = 8.8 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Frame = +3 Query: 465 WCSCCMACP*LNLQAAGQSAVEGAD-RYCIGDVAQKLDLAQEFAV 596 WC C A +AAG+ EG++ R D ++ DLAQ++ V Sbjct: 52 WCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGV 96
>PDIA1_HUMAN (P07237) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI)| (Prolyl 4-hydroxylase beta subunit) (Cellular thyroid hormone-binding protein) (p55) Length = 508 Score = 29.6 bits (65), Expect = 8.8 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Frame = +3 Query: 465 WCSCCMACP*LNLQAAGQSAVEGAD-RYCIGDVAQKLDLAQEFAV 596 WC C A +AAG+ EG++ R D ++ DLAQ++ V Sbjct: 52 WCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGV 96 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 95,287,407 Number of Sequences: 219361 Number of extensions: 1877613 Number of successful extensions: 7140 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 6313 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7088 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6655306086 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
