Clone Name | rbasd23h08 |
---|---|
Clone Library Name | barley_pub |
>ACP1_HORVU (P02902) Acyl carrier protein 1, chloroplast precursor (Acyl| carrier protein I) (ACP I) Length = 149 Score = 45.4 bits (106), Expect = 4e-05 Identities = 23/24 (95%), Positives = 23/24 (95%) Frame = -3 Query: 296 SAQDIAXVQDAANLIEKLVTEKTA 225 SAQDIA VQDAANLIEKLVTEKTA Sbjct: 126 SAQDIATVQDAANLIEKLVTEKTA 149
>ACP1_CASGL (P93092) Acyl carrier protein 1, chloroplast precursor (ACP 1)| Length = 136 Score = 33.9 bits (76), Expect = 0.11 Identities = 16/23 (69%), Positives = 20/23 (86%) Frame = -3 Query: 296 SAQDIAXVQDAANLIEKLVTEKT 228 SAQ IA VQDAA+LIEKL+ +K+ Sbjct: 113 SAQSIATVQDAADLIEKLIEKKS 135
>ACP3_HORVU (P15543) Acyl carrier protein 3, chloroplast precursor (Acyl| carrier protein III) (ACP III) Length = 132 Score = 31.2 bits (69), Expect = 0.70 Identities = 15/24 (62%), Positives = 20/24 (83%) Frame = -3 Query: 296 SAQDIAXVQDAANLIEKLVTEKTA 225 SAQ IA V+DAA LI+KLV+ K++ Sbjct: 109 SAQAIATVEDAATLIDKLVSAKSS 132
>ACP3_CUPLA (P52413) Acyl carrier protein 3, chloroplast precursor (ACP)| Length = 143 Score = 31.2 bits (69), Expect = 0.70 Identities = 16/22 (72%), Positives = 17/22 (77%) Frame = -3 Query: 296 SAQDIAXVQDAANLIEKLVTEK 231 SAQ I VQDAA+LIEKLV K Sbjct: 121 SAQSIQTVQDAADLIEKLVGNK 142
>ACP4_CUPLA (P52414) Acyl carrier protein 4, chloroplast precursor (ACP)| Length = 139 Score = 30.8 bits (68), Expect = 0.92 Identities = 15/22 (68%), Positives = 18/22 (81%) Frame = -3 Query: 296 SAQDIAXVQDAANLIEKLVTEK 231 SAQ I VQDAA+LIEKL+ +K Sbjct: 116 SAQSIQTVQDAADLIEKLMEKK 137
>ACP2_CUPLA (P52412) Acyl carrier protein 2, chloroplast precursor (ACP)| Length = 137 Score = 30.8 bits (68), Expect = 0.92 Identities = 15/22 (68%), Positives = 18/22 (81%) Frame = -3 Query: 296 SAQDIAXVQDAANLIEKLVTEK 231 SAQ I VQDAA+LIEKL+ +K Sbjct: 114 SAQSIQTVQDAADLIEKLMEKK 135
>ACP1_CUPLA (P52411) Acyl carrier protein 1, chloroplast precursor (ACP)| Length = 140 Score = 30.8 bits (68), Expect = 0.92 Identities = 15/22 (68%), Positives = 18/22 (81%) Frame = -3 Query: 296 SAQDIAXVQDAANLIEKLVTEK 231 SAQ I VQDAA+LIEKL+ +K Sbjct: 117 SAQSIQTVQDAADLIEKLMEKK 138
>ACP2_HORVU (P08817) Acyl carrier protein 2, chloroplast precursor (Acyl| carrier protein II) (ACP II) Length = 129 Score = 29.3 bits (64), Expect = 2.7 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = -3 Query: 296 SAQDIAXVQDAANLIEKLV 240 SAQ IA V+DAANLI+ LV Sbjct: 109 SAQTIATVEDAANLIDSLV 127
>UBP9_YEAST (P39967) Ubiquitin carboxyl-terminal hydrolase 9 (EC 3.1.2.15)| (Ubiquitin thioesterase 9) (Ubiquitin-specific-processing protease 9) (Deubiquitinating enzyme 9) Length = 754 Score = 28.9 bits (63), Expect = 3.5 Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 10/60 (16%) Frame = +1 Query: 40 APTQNLERMKKEQMAMNTQHRLNAKLSINYFL----------SPQMRPKNQKSTDPDDTF 189 +PT+ ++ +KKE + NT + +A +N+ L +P+MR QK+ + +D F Sbjct: 413 SPTEFVKILKKENVLFNTMMQQDAHEFLNFLLNDFSEYIQRNNPRMRFGPQKTDNSNDNF 472 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,086,943 Number of Sequences: 219361 Number of extensions: 693438 Number of successful extensions: 1754 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1720 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1754 length of database: 80,573,946 effective HSP length: 74 effective length of database: 64,341,232 effective search space used: 1544189568 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)