ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd23h04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP005930.3| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
2dbj|AK121119.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 1e-13
3dbj|AK068222.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 1e-13
4emb|BX247948.4| Zebrafish DNA sequence from clone DKEY-34E4 in l... 48 0.029
5emb|BX248103.7| Zebrafish DNA sequence from clone CH211-226C13 i... 48 0.029
6emb|AL929590.15| Zebrafish DNA sequence from clone DKEY-46K8 in ... 48 0.029
7dbj|BS000007.1| Pan troglodytes chromosome 22 clone:PTB-005B20, ... 44 0.46
8emb|BX649502.4| Zebrafish DNA sequence from clone DKEY-204F11 in... 44 0.46
9gb|AC006556.3|AC006556 Homo sapiens, clone hRPK.37_A_1, complete... 44 0.46
10dbj|AP001660.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 44 0.46
11emb|AL078615.2|HS98L15 Homo sapiens chromosome 21 PAC RPCIP704L1... 44 0.46
12emb|BX855606.3| Mouse DNA sequence from clone RP24-136M10 on chr... 42 1.8
13gb|AC104781.4| Homo sapiens BAC clone RP11-30C22 from 2, complet... 42 1.8
14emb|AJ316276.1|CTA316276 Caulerpa taxifolia 18S rRNA gene (parti... 42 1.8
15gb|AC165250.2| Mus musculus BAC clone RP24-209D3 from chromosome... 42 1.8
16gb|AC113474.18| Mus musculus chromosome 5, clone RP23-297J17, co... 40 7.1
17gb|AC145477.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.1
18gb|AC135239.3| Mus musculus BAC clone RP23-324D2 from chromosome... 40 7.1
19gb|AC145396.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.1
20emb|CT030514.1| Xenopus tropicalis finished cDNA, clone TTpA022d06 40 7.1
21gb|AE014305.1| Homo sapiens chromosome 13q34 schizophrenia regio... 40 7.1
22gb|AC100953.12| Mus musculus chromosome 5, clone RP23-73P16, com... 40 7.1
23emb|AL590132.7| Human DNA sequence from clone RP11-255G4 on chro... 40 7.1
24emb|AL359262.9| Human DNA sequence from clone RP11-334O13 on chr... 40 7.1
25emb|AL162717.10| Human DNA sequence from clone RP11-123H22 on ch... 40 7.1
26emb|AL136455.6| Human DNA sequence from clone RP11-97C18 on chro... 40 7.1
27gb|AC163212.3| Mus musculus chromosome 3, clone RP24-102O2, comp... 40 7.1
28gb|AC108078.3| Homo sapiens BAC clone RP11-790I12 from 4, comple... 40 7.1
29gb|AC104041.5| Homo sapiens chromosome 15, clone CTD-2034I4, com... 40 7.1
30gb|AC091214.20| Homo sapiens 12q BAC RP11-13F9 (Roswell Park Can... 40 7.1
31dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
32gb|AC097536.3| Homo sapiens BAC clone RP11-803N5 from 2, complet... 40 7.1
33ref|NM_001011408.1| Xenopus tropicalis hypothetical LOC496885 (L... 40 7.1
34gb|AF135419.1|AF135419 sHomo sapiens 4q13 genomic sequence 40 7.1
35emb|BX679673.6| Mouse DNA sequence from clone RP23-252K15 on chr... 40 7.1
36emb|BX004989.8| Zebrafish DNA sequence from clone CH211-167M4 in... 40 7.1
37dbj|AK069902.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.1
38emb|AL359950.4|CNS05TF2 Human chromosome 14 DNA sequence BAC R-5... 40 7.1
39emb|BX663521.10| Zebrafish DNA sequence from clone DKEYP-50F5 in... 40 7.1
40emb|BX005458.19| Zebrafish DNA sequence from clone CH211-173L10 ... 40 7.1
41dbj|AP001835.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 7.1
42dbj|AP000755.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 7.1
43gb|BC088778.1| Xenopus tropicalis hypothetical LOC496885, mRNA (... 40 7.1
44emb|AL773540.18| Mouse DNA sequence from clone RP23-177L19 on ch... 40 7.1
45emb|AL837507.5| Mouse DNA sequence from clone RP23-267B2 on chro... 40 7.1 
>dbj|AP005930.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0502B12
          Length = 197160

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 72/79 (91%), Gaps = 2/79 (2%)
 Strand = Plus / Plus

                                                                          
Query: 177    aacctgttgctattgcaaagaacatttttctacatcacaactgtcagctgcaagggtcaa 236
              |||||||||||||||||||||||| |||||||||||||||||||||  | ||| ||||||
Sbjct: 167482 aacctgttgctattgcaaagaaca-ttttctacatcacaactgtcaattccaa-ggtcaa 167539

                                 
Query: 237    attaatgagatatccacat 255
               | ||||||||||||||||
Sbjct: 167540 ttaaatgagatatccacat 167558
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>dbj|AK121119.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023074F05, full
            insert sequence
          Length = 5217

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 72/79 (91%), Gaps = 2/79 (2%)
 Strand = Plus / Minus

                                                                        
Query: 177  aacctgttgctattgcaaagaacatttttctacatcacaactgtcagctgcaagggtcaa 236
            |||||||||||||||||||||||| |||||||||||||||||||||  | ||| ||||||
Sbjct: 4932 aacctgttgctattgcaaagaaca-ttttctacatcacaactgtcaattccaa-ggtcaa 4875

                               
Query: 237  attaatgagatatccacat 255
             | ||||||||||||||||
Sbjct: 4874 ttaaatgagatatccacat 4856
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>dbj|AK068222.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013138E23, full
            insert sequence
          Length = 3875

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 72/79 (91%), Gaps = 2/79 (2%)
 Strand = Plus / Minus

                                                                        
Query: 177  aacctgttgctattgcaaagaacatttttctacatcacaactgtcagctgcaagggtcaa 236
            |||||||||||||||||||||||| |||||||||||||||||||||  | ||| ||||||
Sbjct: 3511 aacctgttgctattgcaaagaaca-ttttctacatcacaactgtcaattccaa-ggtcaa 3454

                               
Query: 237  attaatgagatatccacat 255
             | ||||||||||||||||
Sbjct: 3453 ttaaatgagatatccacat 3435
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>emb|BX247948.4| Zebrafish DNA sequence from clone DKEY-34E4 in linkage group 5,
             complete sequence
          Length = 131707

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 451   agagtttcgtcatcagattccttcttgc 478
             ||||||| ||||||||||||||||||||
Sbjct: 79931 agagttttgtcatcagattccttcttgc 79904
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>emb|BX248103.7| Zebrafish DNA sequence from clone CH211-226C13 in linkage group 5,
             complete sequence
          Length = 66173

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 451   agagtttcgtcatcagattccttcttgc 478
             ||||||| ||||||||||||||||||||
Sbjct: 59339 agagttttgtcatcagattccttcttgc 59312
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>emb|AL929590.15| Zebrafish DNA sequence from clone DKEY-46K8 in linkage group 5,
            complete sequence
          Length = 163866

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 451  agagtttcgtcatcagattccttcttgc 478
            ||||||| ||||||||||||||||||||
Sbjct: 6883 agagttttgtcatcagattccttcttgc 6910
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>dbj|BS000007.1| Pan troglodytes chromosome 22 clone:PTB-005B20, map 22, complete
             sequences
          Length = 123600

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 179   cctgttgctattgcaaagaaca 200
             ||||||||||||||||||||||
Sbjct: 89111 cctgttgctattgcaaagaaca 89132
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>emb|BX649502.4| Zebrafish DNA sequence from clone DKEY-204F11 in linkage group 3,
             complete sequence
          Length = 247387

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 392   tcagaaaagtgaaaatatatca 413
             ||||||||||||||||||||||
Sbjct: 92014 tcagaaaagtgaaaatatatca 92035
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>gb|AC006556.3|AC006556 Homo sapiens, clone hRPK.37_A_1, complete sequence
          Length = 156833

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 179    cctgttgctattgcaaagaaca 200
              ||||||||||||||||||||||
Sbjct: 132734 cctgttgctattgcaaagaaca 132713
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>dbj|AP001660.1| Homo sapiens genomic DNA, chromosome 21q, section 4/105
          Length = 340000

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 179    cctgttgctattgcaaagaaca 200
              ||||||||||||||||||||||
Sbjct: 209020 cctgttgctattgcaaagaaca 209041
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>emb|AL078615.2|HS98L15 Homo sapiens chromosome 21 PAC RPCIP704L1598Q2, complete sequence
          Length = 116189

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 179   cctgttgctattgcaaagaaca 200
             ||||||||||||||||||||||
Sbjct: 20454 cctgttgctattgcaaagaaca 20475
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>emb|BX855606.3| Mouse DNA sequence from clone RP24-136M10 on chromosome 4, complete
            sequence
          Length = 79882

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 379  aaacagaagagaatcagaaaagtga 403
            ||||||||||||| |||||||||||
Sbjct: 2204 aaacagaagagaaacagaaaagtga 2180
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>gb|AC104781.4| Homo sapiens BAC clone RP11-30C22 from 2, complete sequence
          Length = 109843

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 49    tgttacacatctgaccctcaa 69
             |||||||||||||||||||||
Sbjct: 55977 tgttacacatctgaccctcaa 55997
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>emb|AJ316276.1|CTA316276 Caulerpa taxifolia 18S rRNA gene (partial), 5.8S rRNA gene, 28S
           rRNA gene (partial), internal transcribed spacer 1
           (ITS1) and internal transcribed spacer 2 (ITS2), clone 1
          Length = 625

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 181 tgttgctattgcaaagaacat 201
           |||||||||||||||||||||
Sbjct: 96  tgttgctattgcaaagaacat 116
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>gb|AC165250.2| Mus musculus BAC clone RP24-209D3 from chromosome 13, complete sequence
          Length = 173581

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 125    cctaaataacattacaaagca 145
              |||||||||||||||||||||
Sbjct: 110311 cctaaataacattacaaagca 110291
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>gb|AC113474.18| Mus musculus chromosome 5, clone RP23-297J17, complete sequence
          Length = 219936

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 373    gaaaacaaacagaagagaat 392
              ||||||||||||||||||||
Sbjct: 103579 gaaaacaaacagaagagaat 103598
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>gb|AC145477.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1402B06,
              complete sequence
          Length = 134001

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 374    aaaacaaacagaagagaatc 393
              ||||||||||||||||||||
Sbjct: 130220 aaaacaaacagaagagaatc 130201
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>gb|AC135239.3| Mus musculus BAC clone RP23-324D2 from chromosome 3, complete sequence
          Length = 190178

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 177   aacctgttgctattgcaaagaaca 200
             ||||||||||| ||||||||||||
Sbjct: 96624 aacctgttgctcttgcaaagaaca 96601
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>gb|AC145396.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0042F15, complete sequence
          Length = 162959

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 374   aaaacaaacagaagagaatc 393
             ||||||||||||||||||||
Sbjct: 37409 aaaacaaacagaagagaatc 37390
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>emb|CT030514.1| Xenopus tropicalis finished cDNA, clone TTpA022d06
          Length = 2879

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 228 aagggtcaaattaatgagat 247
           ||||||||||||||||||||
Sbjct: 221 aagggtcaaattaatgagat 240
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>gb|AE014305.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 2 of
              11 of the complete sequence
          Length = 613322

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 385    aagagaatcagaaaagtgaa 404
              ||||||||||||||||||||
Sbjct: 150399 aagagaatcagaaaagtgaa 150418
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>gb|AC100953.12| Mus musculus chromosome 5, clone RP23-73P16, complete sequence
          Length = 216490

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 368   caacagaaaacaaacagaag 387
             ||||||||||||||||||||
Sbjct: 87302 caacagaaaacaaacagaag 87283
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>emb|AL590132.7| Human DNA sequence from clone RP11-255G4 on chromosome 1 Contains part
             of the KCNH1 gene for a potassium voltage-gated channel,
             subfamily H (eag-related), member, complete sequence
          Length = 150090

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 383   agaagagaatcagaaaagtg 402
             ||||||||||||||||||||
Sbjct: 21709 agaagagaatcagaaaagtg 21728
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>emb|AL359262.9| Human DNA sequence from clone RP11-334O13 on chromosome 13 Contains a
              high-mobility group pseudogene, complete sequence
          Length = 162763

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 134    cattacaaagcaaatccttc 153
              ||||||||||||||||||||
Sbjct: 119924 cattacaaagcaaatccttc 119905
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>emb|AL162717.10| Human DNA sequence from clone RP11-123H22 on chromosome 13q14.2-21.2
             Contains a novel gene, complete sequence
          Length = 153859

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 385   aagagaatcagaaaagtgaa 404
             ||||||||||||||||||||
Sbjct: 29978 aagagaatcagaaaagtgaa 29997
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>emb|AL136455.6| Human DNA sequence from clone RP11-97C18 on chromosome 1p13.3-21.2
             Contains an adaptor-related protein complex 2, beta 1
             subunit (AP2B1) pseudogene, complete sequence
          Length = 159570

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 390   aatcagaaaagtgaaaatat 409
             ||||||||||||||||||||
Sbjct: 64505 aatcagaaaagtgaaaatat 64486
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>gb|AC163212.3| Mus musculus chromosome 3, clone RP24-102O2, complete sequence
          Length = 199319

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 177   aacctgttgctattgcaaagaaca 200
             ||||||||||| ||||||||||||
Sbjct: 67066 aacctgttgctcttgcaaagaaca 67043
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>gb|AC108078.3| Homo sapiens BAC clone RP11-790I12 from 4, complete sequence
          Length = 103343

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 366   ttcaacagaaaacaaacaga 385
             ||||||||||||||||||||
Sbjct: 65498 ttcaacagaaaacaaacaga 65479
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>gb|AC104041.5| Homo sapiens chromosome 15, clone CTD-2034I4, complete sequence
          Length = 188519

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 391    atcagaaaagtgaaaatata 410
              ||||||||||||||||||||
Sbjct: 125220 atcagaaaagtgaaaatata 125239
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>gb|AC091214.20| Homo sapiens 12q BAC RP11-13F9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 143331

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 368   caacagaaaacaaacagaagagaa 391
             |||||||||| |||||||||||||
Sbjct: 76316 caacagaaaagaaacagaagagaa 76293
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 374     aaaacaaacagaagagaatc 393
               ||||||||||||||||||||
Sbjct: 7852634 aaaacaaacagaagagaatc 7852615
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>gb|AC097536.3| Homo sapiens BAC clone RP11-803N5 from 2, complete sequence
          Length = 194553

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 396   aaaagtgaaaatatatcagg 415
             ||||||||||||||||||||
Sbjct: 23311 aaaagtgaaaatatatcagg 23292
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>ref|NM_001011408.1| Xenopus tropicalis hypothetical LOC496885 (LOC496885), mRNA
          Length = 1567

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 228 aagggtcaaattaatgagat 247
           ||||||||||||||||||||
Sbjct: 207 aagggtcaaattaatgagat 226
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>gb|AF135419.1|AF135419 sHomo sapiens 4q13 genomic sequence
          Length = 63705

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 366   ttcaacagaaaacaaacaga 385
             ||||||||||||||||||||
Sbjct: 23524 ttcaacagaaaacaaacaga 23543
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>emb|BX679673.6| Mouse DNA sequence from clone RP23-252K15 on chromosome X, complete
             sequence
          Length = 81270

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 191   gcaaagaacatttttctacatcac 214
             ||||||||||||||||| ||||||
Sbjct: 37927 gcaaagaacatttttctccatcac 37950
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>emb|BX004989.8| Zebrafish DNA sequence from clone CH211-167M4 in linkage group 6,
              complete sequence
          Length = 172968

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 459    gtcatcagattccttcttgc 478
              ||||||||||||||||||||
Sbjct: 126693 gtcatcagattccttcttgc 126712
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>dbj|AK069902.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034K17, full
           insert sequence
          Length = 1306

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 374 aaaacaaacagaagagaatc 393
           ||||||||||||||||||||
Sbjct: 698 aaaacaaacagaagagaatc 679
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>emb|AL359950.4|CNS05TF2 Human chromosome 14 DNA sequence BAC R-566K8 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 194407

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 372   agaaaacaaacagaagagaa 391
             ||||||||||||||||||||
Sbjct: 69528 agaaaacaaacagaagagaa 69509
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>emb|BX663521.10| Zebrafish DNA sequence from clone DKEYP-50F5 in linkage group 14,
              complete sequence
          Length = 179663

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 459    gtcatcagattccttcttgc 478
              ||||||||||||||||||||
Sbjct: 108217 gtcatcagattccttcttgc 108198
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>emb|BX005458.19| Zebrafish DNA sequence from clone CH211-173L10 in linkage group 18,
             complete sequence
          Length = 140289

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 357   ctctgcagattcaacagaaaacaa 380
             |||||||||||||||| |||||||
Sbjct: 28581 ctctgcagattcaacacaaaacaa 28604
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>dbj|AP001835.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-668M17, complete
             sequences
          Length = 204939

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   caaatccttcctatccagct 163
             ||||||||||||||||||||
Sbjct: 97277 caaatccttcctatccagct 97296
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>dbj|AP000755.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-716H6, complete
              sequences
          Length = 152306

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 144    caaatccttcctatccagct 163
              ||||||||||||||||||||
Sbjct: 151356 caaatccttcctatccagct 151375
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>gb|BC088778.1| Xenopus tropicalis hypothetical LOC496885, mRNA (cDNA clone
           MGC:108162 IMAGE:7006695), complete cds
          Length = 1567

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 228 aagggtcaaattaatgagat 247
           ||||||||||||||||||||
Sbjct: 207 aagggtcaaattaatgagat 226
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>emb|AL773540.18| Mouse DNA sequence from clone RP23-177L19 on chromosome 2, complete
             sequence
          Length = 217148

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 179   cctgttgctattgcaaagaa 198
             ||||||||||||||||||||
Sbjct: 74063 cctgttgctattgcaaagaa 74082
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>emb|AL837507.5| Mouse DNA sequence from clone RP23-267B2 on chromosome 4, complete
             sequence
          Length = 99832

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 495   atcagggtttttctcttccaactc 518
             ||||||| ||||||||||||||||
Sbjct: 59917 atcagggcttttctcttccaactc 59940


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,236,180
Number of Sequences: 3902068
Number of extensions: 5236180
Number of successful extensions: 105870
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 105729
Number of HSP's gapped (non-prelim): 135
length of query: 528
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 505
effective length of database: 17,143,297,704
effective search space: 8657365340520
effective search space used: 8657365340520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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